Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 5 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              10.4Kb                   incomplete(20)                plate                                        4978-15396               0                        17                      9                                8                                100%                             0                                no                               6                                PHAGE_Pseudo_phiR18_NC_041964(4),PHAGE_Pseudo_KPP25_NC_024123(4),PHAGE_Acidov_ACP17_NC_041997(3),PHAGE_Pseudo_F116_NC_006552(2),PHAGE_Pseudo_H66_NC_042342(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Synech_ACG_2014j_NC_026926(1),PHAGE_Halomo_phiHAP_1_NC_010342(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Sulfit_EE36phi1_NC_012696(1),PHAGE_Acinet_vB_AbaM_ME3_NC_041884(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Synech_S_CAM4_NC_031900(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Mycoba_Adler_NC_023591(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Dinoro_DFL12phi1_NC_024367(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Salmon_epsilon15_NC_004775(1)   4                                23.52%                           67.16%                        
                                  2              29.2Kb                   intact(100)                   terminase,portal,capsid,head,plate,fiber,lysin     41772-70987              0                        28                      19                               9                                100%                             0                                no                               11                               PHAGE_Ralsto_RS138_NC_029107(6),PHAGE_Stenot_S1_NC_011589(5),PHAGE_Xylell_Salvo_NC_042345(3),PHAGE_Bacter_Lily_NC_028841(3),PHAGE_Rueger_DSS3_P1_NC_025428(2),PHAGE_Shewan_1/44_NC_025463(2),PHAGE_Xylell_Sano_NC_042344(2),PHAGE_Aurant_AmM_1_NC_027334(2),PHAGE_Vibrio_X29_NC_024369(2),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Escher_vB_EcoM_ep3_NC_025430(1),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Escher_bV_EcoS_AKS96_NC_024789(1),PHAGE_Idioma_1N2_2_NC_025439(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Synech_S_SKS1_NC_020851(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Salmon_37_NC_029045(1),PHAGE_Entero_Enc34_NC_019524(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Pseudo_Zigelbrucke_NC_041904(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082(1),PHAGE_Paenib_Tripp_NC_028930(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Vibrio_12B12_NC_021070(1),PHAGE_Escher_Rtp_NC_007603(1),PHAGE_Clostr_phiCTC2A_NC_030949(1),PHAGE_Loktan_pCB2051_A_NC_020853(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Rhizob_RR1_A_NC_021560(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Bacill_TP21_L_NC_011645(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Synech_S_CBS1_NC_016164(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Cyanop_S_RIM32_NC_031235(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Clostr_phiCTP1_NC_014457(1),PHAGE_Xantho_CP1_NC_019933(1),PHAGE_Entero_vB_EcoS_ACG_M12_NC_019404(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Escher_bV_EcoS_AHP42_NC_024793(1),PHAGE_Clostr_phiCT19406A_NC_030950(1),PHAGE_Vibrio_SIO_2_NC_016567(1)   7                                21.42%                           64.40%                        
                                  3              13.6Kb                   incomplete(20)                plate                                        572931-586601            0                        19                      12                               7                                100%                             0                                no                               8                                PHAGE_Bacter_APSE_2_NC_011551(4),PHAGE_Xylell_Xfas53_NC_013599(4),PHAGE_Bordet_BPP_1_NC_005357(4),PHAGE_Burkho_BcepC6B_NC_005887(3),PHAGE_Endosy_APSE_1_NC_000935(3),PHAGE_Acidov_ACP17_NC_041997(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Bacill_PBC1_NC_017976(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Thermu_phiYS40_NC_008584(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Vibrio_SHOU24_NC_023569(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Pseudo_PaMx28_NC_028931(1),PHAGE_Dinoro_vB_DshS_R5C_NC_041921(1),PHAGE_Salmon_9NA_NC_025443(1),PHAGE_Proteu_VB_PmiS_Isfahan_NC_041925(1),PHAGE_Thermu_TMA_NC_015937(1),PHAGE_Pseudo_pYD6_A_NC_020849(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Edward_eiAU_NC_042029(1),PHAGE_Vibrio_VBP32_NC_020868(1)   4                                21.05%                           63.85%                        
                                  4              59.7Kb                   intact(150)                   terminase,portal,plate,head,tail,fiber,integrase     591380-651120            1                        45                      28                               15                               95.5%                            2                                yes                              21                               PHAGE_Ralsto_RS138_NC_029107(6),PHAGE_Stenot_S1_NC_011589(5),PHAGE_Acidov_ACP17_NC_041997(4),PHAGE_Shewan_1/44_NC_025463(3),PHAGE_Pseudo_phiPSA1_NC_024365(2),PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082(2),PHAGE_Entero_mEp213_NC_019720(2),PHAGE_Xylell_Salvo_NC_042345(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Pseudo_phiR18_NC_041964(2),PHAGE_Xantho_CP2_NC_020205(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Burkho_AH2_NC_018283(2),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Synech_S_SKS1_NC_020851(2),PHAGE_Pseudo_KPP25_NC_024123(2),PHAGE_Xylell_Sano_NC_042344(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(2),PHAGE_Flavob_11b_NC_006356(2),PHAGE_Vibrio_VP58.5_NC_027981(2),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Escher_vB_EcoM_ep3_NC_025430(1),PHAGE_Acinet_AbP2_NC_041998(1),PHAGE_Burkho_BcepGomr_NC_009447(1),PHAGE_Strept_phiARI0131_1_NC_031901(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Entero_Enc34_NC_019524(1),PHAGE_Bacill_phBC6A51_NC_004820(1),PHAGE_Burkho_BcepNazgul_NC_005091(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Dinoro_DFL12phi1_NC_024367(1),PHAGE_Gordon_Zirinka_NC_031097(1),PHAGE_Salmon_118970_sal1_NC_031930(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Polari_P12002S_NC_028763(1),PHAGE_Loktan_pCB2051_A_NC_020853(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Ralsto_RSP15_NC_030948(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Mycoba_Squirty_NC_026588(1),PHAGE_Silici_DSS3phi2_NC_012697(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Acinet_YMC11/12/R2315_NC_028855(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Caulob_CcrColossus_NC_019406(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Strept_phiARI0468_2_NC_031923(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Sulfit_EE36phi1_NC_012696(1),PHAGE_Thermu_IN93_NC_004462(1),PHAGE_Myxoco_Mx8_NC_003085(1),PHAGE_Escher_vB_EcoM_Alf5_NC_031082(1),PHAGE_Achrom_phiAxp_2_NC_029106(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Strept_phiARI0460_1_NC_031913(1),PHAGE_Paraco_Shpa_NC_041868(1),PHAGE_Acinet_IME_AB2_NC_041857(1),PHAGE_Acinet_YMC_13_01_C62_NC_024785(1),PHAGE_Salmon_Chi_NC_021315(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Rhizob_RR1_A_NC_021560(1),PHAGE_Synech_ACG_2014j_NC_026926(1),PHAGE_Salmon_Chi_NC_025442(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Cyanop_S_RIM32_NC_031235(1),PHAGE_Synech_S_CAM4_NC_031900(1),PHAGE_Salmon_BP12C_NC_031228(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Thalas_BA3_NC_009990(1),PHAGE_Vibrio_SIO_2_NC_016567(1)   7                                13.33%                           63.01%                        
                                  5              22.4Kb                   intact(120)                   terminase,portal,lysin,capsid,virion,tail,plate     653336-675753            0                        23                      18                               5                                100%                             0                                no                               7                                PHAGE_Burkho_BcepMigl_NC_019917(11),PHAGE_Burkho_Bcep22_NC_005262(10),PHAGE_Burkho_DC1_NC_018452(10),PHAGE_Burkho_BcepIL02_NC_012743(9),PHAGE_Sinorh_PBC5_NC_003324(6),PHAGE_Erwini_PEp14_NC_016767(5),PHAGE_Pseudo_H66_NC_042342(3),PHAGE_Pseudo_F116_NC_006552(2),PHAGE_Vibrio_12A4_NC_021068(2),PHAGE_Salini_CW02_NC_019540(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Synech_S_CBS4_NC_016766(1),PHAGE_Cyanop_KBS_S_2A_NC_020854(1),PHAGE_Sulfit_NYA_2014a_NC_027299(1),PHAGE_Synech_S_RIP2_NC_020838(1),PHAGE_Synech_S_SKS1_NC_020851(1),PHAGE_Acinet_vB_AbaM_ME3_NC_041884(1),PHAGE_Pseudo_nickie_NC_042091(1),PHAGE_Cyanop_KBS_P_1A_NC_020865(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Cyanop_MED4_117_NC_020857(1),PHAGE_Sulfit_pCB2047_A_NC_020858(1),PHAGE_Ralsto_RSB3_NC_022917(1),PHAGE_Yersin_phiR201_NC_019919(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Sulfit_pCB2047_C_NC_020856(1),PHAGE_Prochl_MED4_184_NC_020847(1),PHAGE_Pseudo_PS_1_NC_029066(1)   11                               47.82%                           65.07%                        
                                  6              35.1Kb                   questionable(70)              integrase,terminase,portal,virion            783193-818293            0                        36                      18                               17                               97.2%                            1                                yes                              7                                PHAGE_Pseudo_H66_NC_042342(11),PHAGE_Pseudo_F116_NC_006552(11),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Iodoba_phiPLPE_NC_011142(2),PHAGE_Burkho_BcepIL02_NC_012743(2),PHAGE_Pseudo_MD8_NC_031091(2),PHAGE_Burkho_KS9_NC_013055(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Arthro_Colucci_NC_042000(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Vibrio_12A4_NC_021068(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Burkho_BcepC6B_NC_005887(1),PHAGE_Vibrio_SHOU24_NC_023569(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Actino_phiAsp2_NC_005885(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Methan_psiM2_NC_001902(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Ralsto_RSK1_NC_022915(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Mycoba_Brujita_NC_011291(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Acinet_phiAC_1_NC_028995(1)   11                               30.55%                           61.99%                        
                                  7              39.4Kb                   questionable(80)              recombinase,lysin,tail,head,terminase        2022051-2061521          0                        28                      14                               14                               100%                             0                                yes                              12                               PHAGE_Burkho_phi1026b_NC_005284(3),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Burkho_Bcep176_NC_007497(2),PHAGE_Staphy_StauST398_2_NC_021323(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Rhodob_RC1_NC_020839(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Achrom_JWX_NC_028768(1),PHAGE_Rhodob_RcRhea_NC_028954(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Staphy_47_NC_007054(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Strept_TG1_NC_018853(1),PHAGE_Paraco_Shpa_NC_041868(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Gordon_BetterKatz_NC_031247(1),PHAGE_Rhodov_RS1_NC_020866(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Achrom_83_24_NC_028834(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Staphy_phi7401PVL_NC_020199(1),PHAGE_Synech_S_CBS1_NC_016164(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Geobac_GBK2_NC_023612(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_Arya_NC_031048(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1),PHAGE_Staphy_tp310_2_NC_009762(1),PHAGE_Staphy_3A_NC_007053(1),PHAGE_Clostr_PhiS63_NC_017978(1),PHAGE_Pseudo_PS_1_NC_029066(1)   3                                10.71%                           61.64%                        
                                  8              28.9Kb                   questionable(80)              lysin,tail,head,plate,portal,terminase       2207012-2235974          0                        30                      24                               6                                100%                             0                                no                               16                               PHAGE_Pseudo_PAJU2_NC_011373(8),PHAGE_Entero_HK022_NC_002166(5),PHAGE_Entero_mEp235_NC_019708(4),PHAGE_Entero_HK140_NC_019710(4),PHAGE_Pseudo_PMG1_NC_016765(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Entero_mEpX2_NC_019705(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Burkho_phi6442_NC_009235(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Roseob_1_NC_015466(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Xylell_Xfas53_NC_013599(2),PHAGE_Burkho_phiE125_NC_003309(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Synech_S_CRM01_NC_015569(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Vibrio_12B8_NC_021073(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Dinoro_vB_DshS_R5C_NC_041921(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Rhodob_RcRhea_NC_028954(1),PHAGE_Caulob_magneto_NC_019407(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Roseob_2_NC_041958(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Ralsto_RSJ5_NC_029007(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Gordon_BetterKatz_NC_031247(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Sphing_Lacusarx_NC_041927(1),PHAGE_Synech_ACG_2014j_NC_026926(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Synech_S_CAM4_NC_031900(1),PHAGE_Rhodob_RcCronus_NC_042049(1),PHAGE_Caulob_swift_NC_019411(1),PHAGE_Caulob_CcrColossus_NC_019406(1),PHAGE_Burkho_JG068_NC_022916(1),PHAGE_Caulob_phiCbK_NC_019405(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1)   8                                26.66%                           60.91%                        
                                  9              38.8Kb                   incomplete(60)                plate,integrase                              2237707-2276542          1                        40                      17                               19                               90%                              4                                yes                              17                               PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(2),PHAGE_Burkho_KL3_NC_015266(2),PHAGE_Caulob_CcrColossus_NC_019406(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Salmon_vB_SenS_AG11_NC_041991(1),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Psychr_pOW20_A_NC_020841(1),PHAGE_Salmon_BPS17W1_NC_042097(1),PHAGE_Achrom_JWAlpha_NC_023556(1),PHAGE_Microb_Dismas_NC_042099(1),PHAGE_Acinet_WCHABP1_NC_041966(1),PHAGE_Deftia_phiW_14_NC_013697(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Myxoco_Mx8_NC_003085(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Natria_PhiCh1_NC_004084(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Mycoba_CRB1_NC_023606(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Acinet_AP22_NC_017984(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Shigel_Sf13_NC_042017(1),PHAGE_Acinet_WCHABP12_NC_041924(1),PHAGE_Pseudo_JBD44_NC_030929(1),PHAGE_Mycoba_Mulciber_NC_031257(1),PHAGE_Mycoba_Blue7_NC_023713(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Escher_phiSUSP1_NC_028808(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Deep_s_D6E_NC_019544(1),PHAGE_Escher_phiSUSP2_NC_028935(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Salmon_SP_031_NC_021775(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Crocei_P2559S_NC_018276(1),PHAGE_Achrom_phiAxp_3_NC_028908(1),PHAGE_Xylell_Xfas53_NC_013599(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Pseudo_Noxifer_NC_041994(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Acinet_AB1_NC_042028(1),PHAGE_Escher_HY02_NC_028872(1)   1                                5%                               62.13%                        
                                  10             32.3Kb                   questionable(80)              integrase,lysin,tail,fiber                   2352737-2385044          1                        19                      12                               6                                94.7%                            1                                yes                              7                                PHAGE_Ralsto_RS138_NC_029107(5),PHAGE_Stenot_S1_NC_011589(3),PHAGE_Synech_S_SKS1_NC_020851(2),PHAGE_Shewan_1/44_NC_025463(2),PHAGE_Burkho_phiE125_NC_003309(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Burkho_KS9_NC_013055(2),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Pseudo_LKO4_NC_041934(1),PHAGE_Rhizob_vB_RleS_L338C_NC_023502(1),PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713(1),PHAGE_Vibrio_SSP002_NC_041910(1),PHAGE_Xylell_Salvo_NC_042345(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Cyanop_S_RIM32_NC_031235(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Pseudo_PAE1_NC_028980(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082(1),PHAGE_Xylell_Sano_NC_042344(1),PHAGE_Pseudo_M6_NC_007809(1),PHAGE_Vibrio_SIO_2_NC_016567(1)   6                                26.31%                           65.32%                        
                                  11             31.4Kb                   questionable(70)              capsid,head,portal,terminase,integrase       2363829-2395321          0                        24                      12                               12                               100%                             0                                yes                              11                               PHAGE_Synech_S_CBS3_NC_015465(2),PHAGE_Burkho_BcepMu_NC_005882(2),PHAGE_Pseudo_PPpW_3_NC_023006(2),PHAGE_Synech_S_CBS1_NC_016164(2),PHAGE_Stenot_S1_NC_011589(2),PHAGE_Burkho_phiE255_NC_009237(2),PHAGE_Bacter_Lily_NC_028841(2),PHAGE_Escher_vB_EcoM_ep3_NC_025430(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Erwini_phiEa104_NC_015292(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Proteu_pPM_01_NC_028812(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Achrom_phiAxp_2_NC_029106(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Agroba_7_7_1_NC_019519(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(1),PHAGE_Erwini_phiEa21_4_NC_011811(1),PHAGE_Roseob_2_NC_041958(1),PHAGE_Salmon_Chi_NC_021315(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Erwini_vB_Eam_MM7_NC_041978(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Provid_Redjac_NC_018832(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Pseudo_PAE1_NC_028980(1),PHAGE_Gordon_Hedwig_NC_031099(1),PHAGE_Rhizob_vB_RglS_P106B_NC_023566(1),PHAGE_Cyanop_S_TIM5_NC_019516(1),PHAGE_Xylell_Xfas53_NC_013599(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Salini_M8CC_19_NC_042349(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Salini_M8CRM_1_NC_042351(1)   2                                8.33%                            66.05%                        
                                  12             21.7Kb                   incomplete(40)                tail,head                                    2414651-2436379          0                        16                      11                               3                                87.5%                            2                                yes                              7                                PHAGE_Burkho_KS5_NC_015265(5),PHAGE_Ralsto_RSA1_NC_009382(4),PHAGE_Burkho_KS14_NC_015273(4),PHAGE_Burkho_KL3_NC_015266(4),PHAGE_Burkho_phiE12_2_NC_009236(3),PHAGE_Stenot_Smp131_NC_023588(3),PHAGE_Burkho_phiE202_NC_009234(3),PHAGE_Ralsto_RSY1_NC_025115(2),PHAGE_Burkho_phi52237_NC_007145(2),PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1),PHAGE_Pseudo_Cr39582_NC_042121(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Pseudo_PM2_NC_000867(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Escher_P2_NC_041848(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Escher_pro483_NC_028943(1)   5                                31.25%                           68.16%                        
                                  13             32.1Kb                   intact(110)                   lysin,tail,head,plate,portal,terminase       3030410-3062562          0                        37                      27                               10                               100%                             0                                no                               18                               PHAGE_Pseudo_PAJU2_NC_011373(8),PHAGE_Entero_HK022_NC_002166(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_mEp235_NC_019708(4),PHAGE_Entero_BP_4795_NC_004813(4),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_mEpX2_NC_019705(4),PHAGE_Pseudo_PMG1_NC_016765(3),PHAGE_Entero_HK140_NC_019710(3),PHAGE_Burkho_phi6442_NC_009235(3),PHAGE_Burkho_phiE125_NC_003309(3),PHAGE_Burkho_phi1026b_NC_005284(3),PHAGE_Caulob_CcrColossus_NC_019406(3),PHAGE_Caulob_karma_NC_019410(2),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Roseob_2_NC_041958(2),PHAGE_Roseob_1_NC_015466(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Caulob_swift_NC_019411(2),PHAGE_Caulob_phiCbK_NC_019405(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Vibrio_12B8_NC_021073(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Dinoro_vB_DshS_R5C_NC_041921(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Caulob_magneto_NC_019407(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Sphing_Lacusarx_NC_041927(1),PHAGE_Synech_ACG_2014j_NC_026926(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Synech_S_CAM4_NC_031900(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Rhodob_RcCronus_NC_042049(1),PHAGE_Xylell_Xfas53_NC_013599(1),PHAGE_Burkho_JG068_NC_022916(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Salmon_ST64T_NC_004348(1)   8                                21.62%                           59.94%                        
                                  14             21.1Kb                   incomplete(30)                plate,integrase                              3069853-3090964          0                        35                      18                               16                               97.1%                            1                                yes                              17                               PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Paraco_Shpa_NC_041868(2),PHAGE_Pseudo_JBD44_NC_030929(2),PHAGE_Ralsto_RSK1_NC_022915(2),PHAGE_Pseudo_PAJU2_NC_011373(2),PHAGE_Caulob_CcrColossus_NC_019406(2),PHAGE_Pseudo_AF_NC_019923(2),PHAGE_Salmon_vB_SenS_AG11_NC_041991(1),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Achrom_JWAlpha_NC_023556(1),PHAGE_Escher_SRT8_NC_042043(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Sulfit_NYA_2014a_NC_027299(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Pseudo_DMS3_NC_008717(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Pseudo_LPB1_NC_027298(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Pseudo_MP22_NC_009818(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Geobac_GBK2_NC_023612(1),PHAGE_Salmon_phSE_2_NC_031026(1),PHAGE_Salmon_SP_031_NC_021775(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Lactob_LBR48_NC_027990(1),PHAGE_Pseudo_Bjorn_NC_042103(1),PHAGE_Achrom_phiAxp_3_NC_028908(1),PHAGE_Crocei_P2559S_NC_018276(1),PHAGE_Lactob_CL1_NC_028888(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Pseudo_Noxifer_NC_041994(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Acinet_vB_AbaM_phiAbaA1_NC_031280(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Salmon_epsilon34_NC_011976(1),PHAGE_Acinet_AB1_NC_042028(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Lactob_iLp1308_NC_028911(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Thalas_BA3_NC_009990(1)   2                                8.57%                            63.21%                        
                                  15             23.5Kb                   intact(100)                   lysin,tail,head,capsid,terminase             3438316-3461833          0                        29                      18                               11                               100%                             0                                no                               14                               PHAGE_Pseudo_D3_NC_002484(4),PHAGE_Burkho_phi1026b_NC_005284(4),PHAGE_Pseudo_PMG1_NC_016765(3),PHAGE_Entero_mEp235_NC_019708(3),PHAGE_Xantho_phiL7_NC_012742(3),PHAGE_Psychr_Psymv2_NC_023734(3),PHAGE_Paraco_Shpa_NC_041868(2),PHAGE_Pseudo_PAJU2_NC_011373(2),PHAGE_Ralsto_RSY1_NC_025115(2),PHAGE_Burkho_phi6442_NC_009235(2),PHAGE_Roseob_1_NC_015466(2),PHAGE_Xantho_CP1_NC_019933(2),PHAGE_Pseudo_phi2_NC_030931(2),PHAGE_Burkho_phiE125_NC_003309(2),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Idioma_1N2_2_NC_025439(1),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Nocard_NBR1_NC_016569(1),PHAGE_Dinoro_vB_DshS_R5C_NC_041921(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Caulob_magneto_NC_019407(1),PHAGE_Vibrio_VpKK5_NC_026610(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Bacill_vB_BhaS_171_NC_030904(1),PHAGE_Phage_phiJL001_NC_006938(1),PHAGE_Lactob_LF1_NC_019486(1),PHAGE_Roseob_2_NC_041958(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Pseudo_JBD44_NC_030929(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Caulob_rogue_NC_019408(1),PHAGE_Propio_PFR1_NC_031076(1),PHAGE_Xantho_OP1_NC_007709(1),PHAGE_Sphing_Lacusarx_NC_041927(1),PHAGE_Xantho_Xop411_NC_009543(1),PHAGE_Lactob_J_1_NC_022756(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Rhodob_RcCronus_NC_042049(1),PHAGE_Pelagi_HTVC010P_NC_020481(1),PHAGE_Caulob_swift_NC_019411(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Lactob_Lrm1_NC_011104(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Lactob_PL_1_NC_022757(1),PHAGE_Caulob_phiCbK_NC_019405(1),PHAGE_Acinet_LZ35_NC_031117(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Pseudo_AF_NC_019923(1)   3                                13.79%                           63.69%                        
                                  16             20.6Kb                   incomplete(60)                terminase,portal,virion                      7152288-7172909          0                        28                      17                               11                               100%                             0                                no                               9                                PHAGE_Pseudo_F116_NC_006552(9),PHAGE_Pseudo_H66_NC_042342(8),PHAGE_Burkho_BcepIL02_NC_012743(3),PHAGE_Burkho_Bcep22_NC_005262(2),PHAGE_Vibrio_12A4_NC_021068(2),PHAGE_Pseudo_phiPSA1_NC_024365(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Burkho_DC1_NC_018452(2),PHAGE_Burkho_BcepMigl_NC_019917(2),PHAGE_Escher_PA28_NC_041935(2),PHAGE_Aggreg_S1249_NC_013597(2),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Pseudo_vB_PsyM_KIL4_NC_042054(1),PHAGE_Pseudo_vB_PsyM_KIL1_NC_030934(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Mycoba_Brujita_NC_011291(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Vibrio_X29_NC_024369(1)   9                                32.14%                           65.36%                        
