gi|00000000|ref|CP019240.1|  Rhodoferax antarcticus strain DSM 24876, complete genome. 3916274, gc%: 59.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
2429111..2429545                   PHAGE_Strept_phiC31_NC_001978: gp9a; RA876_11720; phage(gi40807289)                  5.71e-11            RhodoferaxantarcticusMTPAENVLSRLEKVRQRQPGQWSARCPAHADKGPSLSVRESPDGGVLIHCFAGCTAGEIVDAMGMELSELFPPRDRPPGAPKRTPRLLSAGQALDLLAAESQLVAVAAGNLGYGVKLTEVDTTRVLKAAGIINFLRDQSKGQYA
2429569..2429581                   attL                                                                                 N/A                 AGCGCATGGCCGC
2429804..2430723                   PROPHAGE_Deinoc_R1: integrase/recombinase, putative; RA876_11725; phage(gi15807824)     1.25e-05            RhodoferaxantarcticusMDTNTPDSANVHFNRQYQTHLKHLKLKGLQPKTIDAYARAIRRIGDYFGHSIDSLSESQLVDYFSDLIASHSWSAVKLDLYGLKFYTLHVLRKPWVMPHLIKPPKASRLPDIVTVAEAQALFAATRTLSYRVFYFTLYSLGLRLSEGLALKVSDIDGARHRVHIRDSKGNRDRLVPLPDATLNVLRKFWLVHRHPELLFPNRAGGLVGARSASSPLDRGGVQKTLHQVTLQCGLKKRSPRIACATAMQRTLRPVSIYWKCRRSWAITRSSPPRATPISPATPILLPAFASTPAASHCTGESNGA
2430720..2431847                   IS91 family transposase; RA876_11730                                                 N/A                 RhodoferaxantarcticusMITLASVIERFEADYLAQYGATSRLCHTKALAAMKRCRTQLAPRMLAQCGACGEQRVVPHSCGHRNCPHCQHHESQQWIERQLQRQVPASYFMLTFTVPAELRELAWQHQSWFYARLFDCAWETVNDFSHNDKKLQGKPGAVAVLHTHSRRLDYHPHVHLVMPAAALDAQINLWRTKCAKASNGLRQDKRYLFNHKALAKVFRAKLLAAIRQEGLVLPARLPEKWVVDCKCVGSGEKALVYLGRYLYRGVIQEKDILRCEDGQVSFRYVDAKSGKMQVRTLSGAAFLWLLLQHVLPKGFRRARNFGFLHPNSKRLIALLHLALRIVASPVQAWVKPRATLRCPCCGEAMQIVRRRICPSAPGREPDEALSGVAML
2432156..2433298                   PHAGE_Mycoba_Kratio_NC_028947: hypothetical protein; RA876_11735; phage(gi971759489)     9.83e-23            RhodoferaxantarcticusMTWVWENWLAQGKLHVLAGAPGQGKTTLALAMAATITAGGLWPDGSRSSLGNVLVWSGEDHYADTLLPRLIAMGADRSRVFFVTGARISGELLTFDPARDLNQLLRAIEKIGGINLLVVDPIVSAVAGDSHKNTEVRRALQPLVDLAAHCNCAALGISHFSKGGQGQDPTQRVVGSVAFSAVARVVMVAAKMRSEDGKDRRILARSKSNIGPDDGGFEYHIEQTEALPGIQASYIAWGDAVAGTARELLTEPDDGASGPSESADKSAQDEAEEFLIELLKDGPSPTKHVETEAKAAGLAWRTVRRASDTLGVKKRKTEGAWYWSKSNLSNEVVQLVQHSNVGQVGQVDGQHEIKPEDSNILNGESSESSDEMESSDVEFL
2433295..2433624                   hypothetical protein; RA876_11740                                                    N/A                 RhodoferaxantarcticusMTPHAILNELWRAGISIQLSDDGQNLVAPAGRLTPANRELVKTHRTELIALMLQARESTALLIAAAMRCCDRHGDGAQARDDMRQQCKDTPPHLRQDLLDHFNGKPANH
2433758..2434954                   PHAGE_Synech_S_CBS3_NC_015465: major capsid protein; RA876_11745; phage(gi331028011)     4.93e-45            RhodoferaxantarcticusMKTHEIREARALLASSPTLTPEGQAKFDALKTEITALENQEARAQFVDDAERRSLGQTVDKSRDSMERQVNVLDAIRCQVEQRAAVGALAEFQAEAKRQGLEARQGGVLVPSSVFEKRATQNTTTNAAVAPDEYRPEQFIGLLRNSMIVRSLGARVLSGLRGDTVVPKQTGSASAFWIAEGAALTESSATYGNVTLSPKHVGALSSMSRQLIQQANPAIEQLTRDDFAQVIGLAVDRALIHGASAAFQPVGILATAGVQTAVLGTPTWAALVAMLEKLAIANVTPNAVLTHAKGATKLQTVLKNAANGAEYLMAGGRVADLPAYVTNQLDAVSGVLGRVIAGDFSQILIGEWGVTEILANPYATGFYERGDVQIRILHTMDAVVRQPAAFVISSDMAI
2434958..2435485                   PHAGE_Lactoc_bIL312_NC_002671: protease; RA876_11750; phage(gi13095910)              2.28e-25            RhodoferaxantarcticusMSAPDIERRGAVAGVTASGRTLSGYAATFGTPAAIGGFTERIAPGAFRASLASGRDVLALLDHRADALLGRTRSGSLKLSEDAKGLHFELQLPDTAAARDVTALAERGDLGGMSFGFVATDESWDGNTRELRAVELHEVSIVQSWPAYQQTEINLRSKPFENEPRNNNYLWLSTL
2435482..2436678                   PHAGE_Entero_mEp235_NC_019708: portal protein; RA876_11755; phage(gi428781813)       3.15e-63            RhodoferaxantarcticusMTIANRVKSFLGLETRATLGINGWPMPLQAGQVTPESAQSVAAVYAAVALIAEAIGSLPLKLYRKADNGDRTVAVHPLATVLHRTPNGSQSATEFWEYLVTCMLLHGNAYARITRDAAGQVRALDPLAPERITIMRAGDRIGGFEYSARDGKRERLLPDDVFHLRHRAGSDPLIGVSPIQTALAVIQLAQAEAHHGQSVWENGTRASGILSMPGLLKPEQRAALANSWASQYAGGGNAGKVPVLESGVTYTPVSMSLADSEFVASRAFSVQEVARLFKIPPIMLGDLSNANYSVSESMNRWFVTHTLQRHLSAIEGAISRQLLTPAAAQTLYPEFNLEGLLRGDSAHRAAFYSSGIADGWLLRSEARALENLSQIPGIDAAPTGQATPKAADYPSKQV
2436723..2437085                   PHAGE_Pseudo_PAJU2_NC_011373: putative endonuclease; RA876_11760; phage(gi209552497)     1.17e-14            RhodoferaxantarcticusMKPARSKGNASGRDADPRRTLKLNGSAWQKLRAHVLDGEPLCRQCTSEGHTTVATDVDHADGNPGNNSMTNLQPLCHQCHSRKTAKDHRKRVACGCDVSGTPADPSHPWNRAAVGDSGTA
2437171..2437653                   PHAGE_Rhizob_16_3_NC_011103: terminase small subunit; RA876_11765; phage(gi195546531)     7.02e-19            RhodoferaxantarcticusMKVTPKRNRSNSAAAAVAAAQSASLGPLQPPAHISLRPGDRPFWDGIMRARARNTWTDADLATAAGLARSQADIERLQAEVDTEGFTILSGKGAPIVNPKHKVLETLTRRAVSLCRVLHVHAEATVGRSRDVGNALANERQACLPLDDEDDLIPRLRIVS
2437673..2439172                   PHAGE_Entero_mEp390_NC_019721: terminase large subunit; RA876_11770; phage(gi428782666)     0.0                 RhodoferaxantarcticusMTRAARVISFIEKHCVTPDGAHVGMPMVLAKFQKDFIRAVYDNAAGTRRAILSVSRKNGKTGLIAGLLLAHLVGPESKQNSQIISGAMSRDQAALVFNLAAKMVQLSPRLSGIVRIVPSGKRLLGLPLNTEYRALAADGRTAHGLSPVLAILDEIGQVRGPQSDFVDAITTSQGAHESPLLIAISTQAASDADLLSVWLDDAQLSADPRIVCRLYAAPDGCDLLDLEAWKLANPALGIFRSLDDLREQMTQAQRMPSMENSARNLLLNQRVSTESPFCSPDVWRACGGPVHPFDGPVYVGLDLSARIDLTAAVVIGQVGDVWQVVPYFWTPEQGLAERARRDRAPYDVWAKQGHLRTTPGASVDYSFVATALAELLADLDVRAVAFDRWRIDVFKRELDNIGCDLPMVPFGQGFKDMAPALDALEAELLNRRIAHGGHPVLTMCAANATVTKDPAGGRKFEKSRSTGSIDGMQALAMALGAATKAEQEQAFSLDSFTFV
2441094..2441106                   attR                                                                                 N/A                 AGCGCATGGCCGC

#### region 2 ####
2591009..2591025                   attL                                                                                 N/A                 ATTTGGCGGAGCGGACG
2591174..2592412                   PROPHAGE_Escher_CFT073: P4 family integrase; RA876_12400; phage(gi26248244)          7.15e-134           RhodoferaxantarcticusMPKKAKELSALEINRLTAPGMVAVGGVAGLYMHINANGAKSWILRAAVGTKRRDMGLGGFPDVTLAGAKERARAARQAIDQGVDPIAERQQAKSALSAKQATAKTFAQCAVEYIERHRDTWANAKHAAQWSSTLETYANPVMGKLLVSDVAQAHVLSVLEPVWKTKTETATRLRGRIEKVLDYATVRKYRSGENPARWKGHLEQLLPAPNKIAKVVHHRALPVDAIGAFMAQLRKQPGTAAKALEFAILCASRSGEVRLATWGEFDLGAKIWTIPAERMKAKVQHRVPLSESAMRILNEHSKQATPDALLFHAASGKPLSDMTLTALTRRMGVNAVPHGFRSTFRDWCAECTNYPRDLAEQALAHKLENKVEAAYLRSDVLEKRRTLMQAWADYCDRATADAKVVQFRGVAA
2592409..2592849                   hypothetical protein; RA876_12405                                                    N/A                 RhodoferaxantarcticusMISIGAAQLAERDLWDQKLMQGDCDLEAALMMVLHIGAPASPYLIARLEQAFMSYRDGLFDDLAIPFGCAINQREKQREKHETHRSNVKFHVQSFSEQGYPLLNPNNYPETESAFTKTADLLKTVTATTAFDIHYDRDTRKRKARK
2592968..2593159                   hypothetical protein; RA876_12410                                                    N/A                 RhodoferaxantarcticusMSQILNQSYRPKQAAELLGIAPATLWRWIKERPDFPKPKRLSARCTVIDGAELVAWRDAQGKP
2593161..2593595                   PHAGE_Strept_phiC31_NC_001978: gp9a; RA876_12415; phage(gi40807289)                  6.14e-11            RhodoferaxantarcticusMTPTENVLSRLEKVRQRQPGQWSARCPAHADKGPSLSVRESPDGGVLIHCFAGCTAGEIVDAMGMELSELFPPRDRPPGAPKRTPRLLSAGQALTLLADEALLVAVAAGNVGYGVKLTEVDTTRVLKAAGIINFLRDQSKGQYA
2593588..2595228                   PHAGE_Rhodoc_ReqiDocB7_NC_023706: gp102; RA876_12420; phage(gi593776036)             2.86e-07            RhodoferaxantarcticusMLNPETMAEVERMAAKYQPQMRNVSAFDYEALDDEVIDTPDHHRNAPKPDQACLHGLIGDVARAGSRDTEANPFAIAANFIVYMSAAIGRGAYTYIGNTRHHCRINALHVGRTGRGRKGDAASLIHRLDIALRALDEYIAPQVHSGGLSTREGLALMIHDGWSKGKNEVEPIHDKRLWVIESEFVNVLMQSKRDGNTLSSALRDCWDGVSIRPATKGQPRIWASHPHVNLSAAITGNELHAVMAARELTNGFANRFLIFWAERTRMLPFPRATPQHDVEALAQRVLEVIRFAGGDRPVERDALQITMSTDAQAMFASLYLDELNDQSSGEIVTALLERRAPVLRRLAMLFALCDLKTEVDVQHIEAALAWTRYWAESVKFIFSDGAAEAASAVTDDAARQILDFLAKDGKATRWEISKICFNGHKSKSLIDKALDELLTSSPAQIEVQTIPRPKGSPGTATKIYLLAAKCAKSAKSEHSRGLQPDFDVCEVCEVCEVSQESDSTLRTLRTLREVSNQPQTRASVDTSHTSHTSQGVSEKTIEREVL
2595225..2595560                   hypothetical protein; RA876_12425                                                    N/A                 RhodoferaxantarcticusMTPAEMLADLFHDDIDVRLADDGLNVVVSAPTGKLTDHHRRLVRGSKPELIGFLLDVERTTALLIAAAMRCCDRHGDGAQARDDMRQQCKDTPPHLRQDLLDHFNGKPANH
2595694..2596914                   PHAGE_Synech_S_CBS3_NC_015465: major capsid protein; RA876_12430; phage(gi331028011)     3.97e-45            RhodoferaxantarcticusMKTHEIREARAAKVSEARALLASSPTLTPEGQAKFDALKTEITALENQEARAQFVDDAERRSLGQTVDKSRDSMERQVNVLDAIRCQVEQRAAVGALAEFQAEAKRQGLEARQGGVLVPSSVFEKRATQNTTTNAAVAPDEYRPEQFIGLLRNSMIVRSLGARVLSGLRGDTVVPKQTGSASAFWIAEGAALTESSATYGNVTLSPKHVGALSSMSRQLIQQANPAIEQLTRDDFAQVIGLAVDRALIHGASAAFQPVGILATAGVQTAVLGTPTWAALVAMLEKLAIANVTPNAVLTHAKGATKLQTVLKNAANGAEYLMAGGRVADLPAYVTNQLDAVSGVLGRVIAGDFSQILIGEWGVTEILANPYATGFYERGDVQIRILHTMDAVVRQPAAFVISSDMAI
2596918..2597445                   PHAGE_Lactoc_bIL312_NC_002671: protease; RA876_12435; phage(gi13095910)              2.28e-25            RhodoferaxantarcticusMSAPDIERRGAVAGVTASGRTLSGYAATFGTPAAIGGFTERIAPGAFRASLASGRDVLALLDHRADALLGRTRSGSLKLSEDAKGLHFELQLPDTAAARDVTALAERGDLGGMSFGFVATDESWDGNTRELRAVELHEVSIVQSWPAYQQTEINLRSKPFENEPRNNNYLWLSTL
2597442..2598638                   PHAGE_Entero_mEp235_NC_019708: portal protein; RA876_12440; phage(gi428781813)       3.15e-63            RhodoferaxantarcticusMTIANRVKSFLGLETRATLGINGWPMPLQAGQVTPESAQSVAAVYAAVALIAEAIGSLPLKLYRKADNGDRTVAVHPLATVLHRTPNGSQSATEFWEYLVTCMLLHGNAYARITRDAAGQVRALDPLAPERITIMRAGDRIGGFEYSARDGKRERLLPDDVFHLRHRAGSDPLIGVSPIQTALAVIQLAQAEAHHGQSVWENGTRASGILSMPGLLKPEQRAALANSWASQYAGGGNAGKVPVLESGVTYTPVSMSLADSEFVASRAFSVQEVARLFKIPPIMLGDLSNANYSVSESMNRWFVTHTLQRHLSAIEGAISRQLLTPAAAQTLYPEFNLEGLLRGDSAHRAAFYSSGIADGWLLRSEARALENLSQIPGIDAAPTGQATPKAADYPSKQV
2598683..2599045                   PHAGE_Pseudo_PAJU2_NC_011373: putative endonuclease; RA876_12445; phage(gi209552497)     1.17e-14            RhodoferaxantarcticusMKPARSKGNASGRDADPRRTLKLNGSAWQKLRAHVLDGEPLCRQCTSEGHTTVATDVDHADGNPGNNSMTNLQPLCHQCHSRKTAKDHRKRVACGCDVSGTPADPSHPWNRAAVGDSGTA
2599131..2599613                   PHAGE_Rhizob_16_3_NC_011103: terminase small subunit; RA876_12450; phage(gi195546531)     7.02e-19            RhodoferaxantarcticusMKVTPKRNRSNSAAAAVAAAQSASLGPLQPPAHISLRPGDRPFWDGIMRARARNTWTDADLATAAGLARSQADIERLQAEVDTEGFTILSGKGAPIVNPKHKVLETLTRRAVSLCRVLHVHAEATVGRSRDVGNALANERQACLPLDDEDDLIPRLRIVS
2599633..2601132                   PHAGE_Entero_mEp390_NC_019721: terminase large subunit; RA876_12455; phage(gi428782666)     0.0                 RhodoferaxantarcticusMTRAARVISFIEKHCVTPDGAHVGMPMVLAKFQKDFIRAVYDNAAGTRRAILSVSRKNGKTGLIAGLLLAHLVGPESKQNSQIISGAMSRDQAALVFNLAAKMVQLSPRLSGIVRIVPSGKRLLGLPLNTEYRALAADGRTAHGLSPVLAILDEIGQVRGPQSDFVDAITTSQGAHESPLLIAISTQAASDADLLSVWLDDAQLSADPRIVCRLYAAPDGCDLLDLEAWKLANPALGIFRSLDDLREQMTQAQRMPSMENSARNLLLNQRVSTESPFCSPDVWRACGGPVHPFDGPVYVGLDLSARIDLTAAVVIGQVGDVWQVVPYFWTPEQGLAERARRDRAPYDVWAKQGHLRTTPGASVDYSFVATALAELLADLDVRAVAFDRWRIDVFKRELDNIGCDLPMVPFGQGFKDMAPALDALEAELLNRRIAHGGHPVLTMCAANATVTKDPAGGRKFEKSRSTGSIDGMQALAMALGAATKAEQEQAFSLDSFTFV
2601553..2601569                   attR                                                                                 N/A                 ATTTGGCGGAGCGGACG
