gi|00000000|ref|CP019383.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4673894, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
263578..264297                     PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; FORC50_0256; phage(gi410491962)     2.01e-05            SalmonellaentericasubspentericaserovarTyphimuriumMIEQPDSKSAKPLYKQLEAALKEAIARGEYKPGQQIPTENELSARWQVSRVTVRKALDALTRENLLTRVSGKGTFVSGEKFQRSMTGIMSFSELCQSQGRRPGSRTIKSVFESVDDETKALLNMNDGEKAVVIERIRYADDVAVSLETVHLPPRFAFLLDEDLNNHSLYECLREKYHLWFTHSRKMIELVYASFEVAHYLGVNEGYPLILIKSEMIDNKGELSCVSQQLIVGDKIRFTV
264476..265450                     hypothetical protein; FORC50_0257                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGMKETVSNIVTSQAEKGGIKHVYYVACGGSYAAFYPAKAFLEKEAKALTVGLYNSGEFINNPPVALGENAVVVVASHKGNTPETIKAAEIARQHGAPVIGLTWVMDSPLVAHCDYVETYTFGDGKDIAGEKTMKGLLSAVELLQQTEGYAHYDDFQDGVSKINRIVWRACEQVAERAQAFAQEYKDDKVIYTVASGAGYGAAYLQSICIFMEMQWIHSACIHSGEFFHGPFEITDANTPFLFQFSEGNTRAVDERALNFLKKYGRRIEVVDAKELGLSTIKTTVIDYFNHSLFNNVYPVYNRALAEARQHPLTTRRYMWKVEY
265514..266359                     Phage tail fiber protein; FORC50_0258                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSISVLGIGDNVVDKYLHSGIMYPGGNALNFAVYAKLADIPSAFMGAFGNDDAAQHVQDVLHQLQIDISHSRHYTGENGYACIRLSHGDRQFVASNKNGVLREHPFSLSDDDLRYISQFTLVHSSINGHLESELEKIKQQTVLLSFDFSGRGTDDYFKKVCPWVDYGFISCSGLSPDEIKIKLNKLYRYGCRHIIATCGHEKVYYFSGADYLEWQPAYIEPVDTLGAGDAFLTGFLLSILQSGMAEPDKESVLRAMRQGGKSAAQVLSHYGAFGFGKPFAQ
266413..267732                     Phage tail fiber protein; FORC50_0259                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFWTELCFILVALMIGARIGGVFLGMVGGLGVGVMVFIFGLTPSTPPIDVILIILSVVLAAASLQASGGLDLLVKLAEKILRRHPRYITLLAPFICYIFTFMSGTGHVVYSLLPVISEVARDSGIRPERPLSISVIASQQAITASPISAAMAAMIGLMAPLGVSISTIMMICVPATLIGVAMGAIATFNKGKELKDDPEYQRRLAEGLIKPAQKESKNTVVTSRAKLSVALFLTSAIVIVLLGLIPALRPMVETAKGLQPLSMSAAIQITMLSFACLIVLLCRPQVDQIISGTVFRAGALAIVCAFGLAWMSETFVNGHIALIKAEVQTLLQQHTWLIAIMMFFVSAMVSSQAATTLILLPLGLALGVPAYALIGSWPAVNGYFFIPVAGQCLAALAFDDTGTTRIGKYVLNHSFMRPGLVNVIVSVIVGLLIGKMVLA
267791..268834                     Prophage tail protein; FORC50_0260                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKIRVFMATVLLLISHCVFSTTSLPHIVILATGGTIAGTAANNTQTAGYKSGELGVQTLINAVPEMNNIARVDGEQVANIGSENMTSDIILKLSQKVNALLARDDVDGVVITHGTDTLDETAYFLNLTVKSDKPVVFTAAMRPASAISADGAMNLLEAVTVAADPNAKGRGVMVVLNDRIGSARFVTKTNATTLDTFKAPEEGYLGVIVNGKPQFETRVEKIHTLRSVFDVRNIKKLPNVVIIYGYQDDPEYMYDAAIAHHADGIIYAGTGAGSVSVRSDAGIKKAEKAGIIVVRASRTGNGVVPLDKGQPGLVSDSLNPAKARVLLMTALTQTRNPELIQSYFSTY
complement(268881..270233)         Phage FluMu protein gp47; FORC50_0261                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHLYGPDYGFDTTINQFDWSKLIASRTAYIDRIHTSYDNVLGKNNVDVIKGFARFVDAKTIEVNGETITADHILIATGGRPSHPSIPGVEYGIDSDGFFALSALPERVAVVGAGYIAVELAGVINALGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTHAVPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPSTDNINLAAAGVKTNEKGYIIVDKFQNTNVEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLSEPQAREQYGDEQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGPEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTASEEFVTMR
270246..270377                     Bacteriophage protein GP46; FORC50_0262                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFVVGRIDSALPAKIFAIVYLKVKGSTDGCDYSGTIQLTEVCP
complement(270338..271180)         Prophage baseplate assembly protein V; FORC50_0263                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEPYISVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDFPLLRAEFQKDNRARVERADGYQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGISEGYKRFATGTYALWYPVVLRQQIKRMVHDLEATGIRKILQIELAIRPDSDQRGMTASGMIVVNPPWKLEQQMNNVLPWLHSRLAPNGHGHTSVSWIVPE
271391..272662                     Prophage tail protein; FORC50_0264                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKLHITVLASSLALAMPALAKDIPLSQAESIAKSVTPDSASVAFNDLEAQWLTQLRKALQGDTAALTRDAMAQMRQNSIQADNAWLQASGYDFHTTENQQMGITLLSAFNTLPEAVLKDNLATVTAINHDADVNTRHQALADAESVEYLYFLSDAMGPRLGRAFLAAYDKGELGKAAALIKASEVSTGAAKKYFHYPRPFQVPGNTIHLTPDDVVVKDGHPYTAGGGAFPSGHTNTGYTDALLMAEMIPERFDALVIRGARYGYSRLVLGVHYPLDVMGARMVAQRNVAHYLNDPYYRTLFNEARAQLREALVKECGTTIVECAASTGKDDPYRDPAMHTFYRFTMTYNLPQQKGEHQPLKIPKGADVLLQTALPNLSSAQCQALMEETALPAGYPLSGETEDQQFWQRLDLSAAYEMARKTR
272844..274886                     Phage tail/DNA circulation protein; FORC50_0265                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTNPLLTSFSLPPFSAIKPEHVVPAVTKALADCRAAVEGVVAHGAPYSWENLCQPLAEADNVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLITDEAELAGMPESALAAAKAQAEAKEQEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEEILALRHELAQLLGFENYAHESLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVEELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERTDVDVWHPEVRFFELYDENNELRGSFYLDLYAREHKRGGAWMDDCVGQMRKADGTLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFNPQQGAKILETLFEIKKQVAVVPSPTWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAYSRFEEEGIFNRETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLEHYGIKG
274893..275651                     Phage tail length tape-measure protein; FORC50_0266                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQICLMDETGATDGALSVLAARWGLEHDEDNPMALVLTPQHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHRQKSALVKKEMRVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYAGTPLTE
complement(275743..277164)         Phage protein; FORC50_0267                                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTLVLGAIVLAIGYFMTGMSLLNPDLIFIALGTIAVGNGLFKANPASLLSKCYQPKDPRLDGAFTLFYMSINIGSLLSLSLAPVIADKFGYAVTYNLCGAGLIVALLVYFACRGMVKNIGSEPDHKPLRFRNLLLVLLGTVVMIFLCAWLMHNVKIANLVLIVLSIVVTIFFFREAFRLDKTGRNKMFVAFILMIEAVLFYILYAQMPTSLNFFAINNVHHEILGFAINPVSFQALNPFWVVVASPVLAAIYTRLGSKGKDLTMPMKFTLGMFLCALGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELLISALGLAMVAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPENITDPLQTLPIYTGVFSKIGLVTLAVTVVMAIMVPWLNRMINTPGTEQ
complement(277540..277974)         Phage tail tube protein; FORC50_0268                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE
278416..278697                     Bacteriophage tail sheath protein; FORC50_0269                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMARYFSSLRALLVVLRGCDPLLYQYVDGGGFFTTHGQPNKQVRLVWYIYAQRYRDHHDEEFIRRCERVRRQFLLTSALCGLVVVSLIALMIWH
complement(278838..280334)         Mu-like prophage FluMu protein GP38; FORC50_0270                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSAHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNAMMTGTSVVDALNIPKVINIFGSLIISPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNASSYEITRTRDAINNVETYFEQRPDLLKAVTGVDQLIPSPEPGATEPTEFHCHPANTINALNRAKGMLANVESYDKLSVEQRSQLRRIMLCISDTTDKVVKLPGVSSDDQRLLKKLKTDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIILSGVLYWLSLKII
280565..281761                     IS, phage, Transposon-related protein; FORC50_0271                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPAAYLSQNPHFCKSALARYTQWDFIDLVGRYGIAWYEKTLGQLFCDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFILALNGETVTTQKLVIASGGLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPCVITARNGTVFRENLLFTHRGLSGPAVLQISSYWQPGELVSINLLPDLSLEDVLNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLGQIPDVSLRQLNVRDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLAAKR
complement(281844..281975)         hypothetical protein; FORC50_0272                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKKEKGPDDEQTPMKRSPSKGVNDVGTRKRGSNVVIISVPGRK
282067..283134                     hypothetical protein; FORC50_0273                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDKMKRHLVWWGAGILVAVAAIAWWMLRPAGIPEGFAASNGRIEATEVDIATKIAGRIDTILVSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVVKQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIEAARTSIIQAQTRVEAAQATERRIVADIDDSELKAPRDGRVQYRVAEPGEVLSAGGRVLNMVDLSDVYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATISFVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPWPDALSVRLSQ
283131..285872                     PHAGE_Bacill_G_NC_023719: gp245; FORC50_0274; phage(gi593777701)                     2.53e-16            SalmonellaentericasubspentericaserovarTyphimuriumMTSLKLVPVPPVAQLEGVSQHYGKTAALNNITLDIPARSMVGLIGPDGVGKSSLLSLISGARVIEQGNVIVLGGDMRDAKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREARITELLNSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQTNMSVLVATAYMEEAERFDWLVAMNAGEILATGSAQQLRAKTHSATLEQAFIALLPEAQRQAHKPVVIPPYHAEQEEIAIEAKDLTMRFGKFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGQPVDPNDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPPAEIPARVAQMIERFMLTEVEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRMSLMHAGKVLASGTPQELVQQRGAANLEAAFISWLQEAAGAAPETPIPPSQTPAASGKPSRQGLSFRRLFSYSRREALELRRDPVRSTLALLGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWSLNLAGSRYFIEQPPLASYDELDRRMRSGELAVAIEIPPNFGRDIARGTPAQIGVWVDGAMPSRAETVKGYVQAMHQSWLQEAASRQPNPVKQTGLLNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFLLLCALSVFVFGVPLKGSFLTLTLAALLYVIIATGLGLLISTFMKSQIAAIFGTSIITLIPATQFSGMIDPVASLEGPGRWIGEIYPTSHFLTIARGTFSKALDLSDLWPLFMPLLIAVPVVMGLSILLLKKQEG
285872..286996                     Phage major capsid protein; FORC50_0275                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRGLRNIYNLGVKELRSLLGDKAMLSLIVFAFTISVYSSATVLPGSLHLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITATEMDAGLDAGRYTFAVNIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNSYIQNIISGEVNSFVARARGDNVQPVSLEIRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPVTPFEIMMAKVWSMGLVVLVVSGLSLMLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLMILVLLPLQMLSGGSTPRESMPQAVQDIMLTMPTTHFVSLAQAILYRGAGLSIVWPQFLTLLAIGGVFFLIALLRFRKTIGTMA
complement(287085..287522)         metalloendopeptidase associated Membrane protein; FORC50_0276                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRRRAIPKGLSQMQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
complement(287578..288156)         Phage portal protein; FORC50_0277                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYQIVLGKVSTLSAGQLPDALIAQAPQGVRRASWLAGRVLLSRALSPLPEMVYGEQGKPAFSAGTPLWFNLSHSGDTIALLLSDEGEVGCDIEVIRPRDNWRSLANAVFSLGEHAEMEAERPEQQLAAFWRIWTRKEAIVKQRGGSAWQIVSVDSTLPSALSVSQCQLDTLSLAVCTPTPFTLTPQTITKAL
complement(288208..289257)         hypothetical protein; FORC50_0278                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMATAQPDKTGMHILLKLASLVIILAGIHAAAGIIVQLLLALFFAIVLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLLVHMVIGNIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
289389..290606                     Phage terminase, large subunit; FORC50_0279                                          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVLGPKKIVVFGLCGCFLSGLGYLLADIASAWPMISLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSLVFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPEAASSS
complement(290610..291167)         putative phage terminase, small subunit, P27 family; FORC50_0280                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIINTLVIK
complement(291240..291905)         PHAGE_Pantoe_vB_PagS_Vid5_NC_042120: clamp-loader subunit; FORC50_0281; phage(gi100041)     6.06e-69            SalmonellaentericasubspentericaserovarTyphimuriumMTPFTQSQRVKALFWLSLFHLLVIISSNYLVQLPITIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLVSYVVSSLFYMGAWQGFAALANFNLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNISDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIIFFLPMYGVLLNMLLKKLADKSEISPLPAS
291985..292320                     hypothetical protein; FORC50_0282                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMANFHAIVNLPGLLTKMGVKYRRFSTIETKMSDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQTGETLLIIADDPATTRDIPGFCTFMEHDLLAQETEGLPYRYLLRKAH
complement(292344..293987)         phage-tail assembly-like protein; FORC50_0283                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASALSYQQQELGGSFQTLIETRVTINRVAIRMLKNQRDPASLDAMNTLLTNAGASLNEAEKHFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAYGNLDAQKAQDDMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLLRPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVNTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRIQKQPRREASPTPLSKGLTPQPAAEQANWESF
complement(294187..296217)         Lytic enzyme; FORC50_0284                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDCAACARKVENAVRQIRGVNQAQVLFATEKLVVDADADLRAQIERAVQKAGYTLRSEDSRDAAPESRLKENLPLITLIIMMAISWGLEQFNHPFGQLAFIVTTLVGLYPIARQALRLMKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARKGVSALMALKPETATRLRDGVREEVAINTLRPGDIIEVAAGGRLPADGKLVSGFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILTLIEEAEERRAPIERFIDRFSRIYTPVIMVIALLVTLIPPLMFDGGWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRITQVAFDKTGTLTIGKPRVTAIHPASGISEAELLALAAAVEQGATHPLAQAIIREAQTRDLAIPTAESQRTLAGTGIEAQVNGERILICAAGKQPAAAFAGQISELENAGQTVVLVLRNETVLGVLALQDTLRDDARDAIRDLHQLGVNGVILTGDNPRAAAAIAGELDLAFKAGLLPEDKVRAVTALNQQAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMITLARATHANIRQNITIALGLKAIFLVTTLLGFTGLWLAILADTGATVLVTANALRLLRKN
296243..296401                     Putative prophage membrane protein; FORC50_0285                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPATAVETGALDAQCSSQQQLSAFCIAGANLKEVKGGTFLPSVSGVDITSSG
complement(296466..297092)         Putative prophage membrane protein; FORC50_0286                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLWSFIAVCLSAWLYVDASYRGPAWQRWVFKPVTLLLLLLLAWQAPMFDAISYLVLAGLCASLVGDALTLLPRQRLLYAVGAFFLSHLLYTIYFASQMTLSFFWPLPLALLIVGALLIAVIWTRLEELRWPVCTFIAMTLVMVWLAGELWFFRPTAPALSAFTGATLLFIGNIVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
297234..297605                     hypothetical protein; FORC50_0287                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKLVVVSSKREKPVNDRRSRQQEVSPAGTSMRYEASFKPLNGGLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTPDNE
complement(297627..297896)         hypothetical protein; FORC50_0288                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLINLGRLLMLFVWAFLILNLVHPFPRPLNIFVNVALVFMALMHGMQLALLKSTIPKEGPQMTTGEKIRIFLFGVFELLVWQKKFKNKK
complement(297886..298509)         Phage antitermination protein Q; FORC50_0289                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQQAVRAREMKKPTHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVMVDAHCLDCFAGSGALGLEALSRYAAQATLLEMDRAVSQQLQKNLATLKANNARVVNTNTLTFLSQPGTPHHVVFVDPPFRKGLLEETLQLLETQGWLADDALIYVESEVENGLPPVPANWALYREKVAGQVAYRLYQRDAQGENDVD
298608..300083                     Phage antitermination protein Q; FORC50_0290                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAKQKKRGFFSWLGFGDKEQKQEQTEEQQIVEEQRPVEPPVETAADVDAQTPAHSKAETEAFAEEVVDVTEKVQESEKPQPVEPEPAAAIEMAAPQIAVEREELPLPEEVKDEAISPEEWQAEAETVEVIAAVEEEGENAAKFTDEELEAQALAAQAAEEAVMVVPPAEEDEPVEAIVQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIIANLTEGASRKQLKDAEALYGLLKDEMGEILAKVDEPLNIEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED
300086..300754                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; FORC50_0291; phage(gi371496158)      6.57e-31            SalmonellaentericasubspentericaserovarTyphimuriumMIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIFFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKARNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRQLVLSDGHLHGGLANE
300747..301802                     Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA; FORC50_0292     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNRRDAINQIRQFGGRLDRLRKSRGGTGGGRNAPGRQKPTPKPNSRKTNVFNEQVRYAWHGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAATQYYPSPQITVYLQKTLDDDAAARVVGQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQSTASLNTLRDRISQINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDLNGLSFDECLLLLLVCSMIGWIAAWLATVQHLRHFTPD
302048..302902                     PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; FORC50_0293; phage(gi331028036)     7.72e-13            SalmonellaentericasubspentericaserovarTyphimuriumMTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA

#### region 2 ####
complement(1112331..1113575)       Type III secretion injected virulence protein YopE; FORC50_1128                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRLSPPVAPVAIQTATRLRRQLAAGSQVDASHFWREANSLALPLVTAINGADDEREVTFLWRAASPLRGVYVRLNRVTDKDNVAKGMMTQLPTTDIWHLTLRLPASYCGSYTMVEIPPETPDETVLQLGSRFASLVGKADPLNSTPGINVRGNAQESVLALDHAPAQEEWSGCRAYAGQLFTSEHRLAGQCRRVRLYLPDVPVVQPLGLLVLTDGEIWFDHLGVSAAIDAAIRSGRIAPVAVLGIDNINARERVAILGGRRELVLDIAERLLPTLRANYPERRWADRTQTVLAGQSLGGVTALMAARHTPESFGLVLSHSPSMWWTPDNRNRPPHFSAEERSWVSEHVLSAPSPAVRTHLCVGALEGSTVPQVKQLHEKLRAAGVESHCSVYTGGHDYAWWRGALIDGLRLLPR
complement(1113685..1117341)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; FORC50_1129; phage(gi9630145)        6.79e-25            SalmonellaentericasubspentericaserovarTyphimuriumMPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFIGNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVMLWMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVRIGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSRMEDGTESVEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWLNTTTGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLAERGSNLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQAAKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQVSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAESVQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVPVVILATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRALSDNFRATRVRAQKYLAVYFPFLTLCTEAAYAAVLLIGATRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSITPGTGGALRLEALTFRYPEKTQPVLDNLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDYRRQTGLVTQDVALFSGDIAENIRYSLPDSSDTEVEIAARQAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHLAQAHILLLDEATARIDRSAEERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIATHGLYARLWRDSIGQTRDTQGEVIG
complement(1117422..1118537)       Type III secretion negative modulator of injection YopK, YopQ; FORC50_1130           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAAEAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMGNFSFFSEEMTDPLVAFVGQWRPDLIVYPPLGVVGPLIAAKYDIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPRDLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKPMVDGLDLISWVMDSAGEVDAEIILHLPANARSDLRSLPSNVRLVDWLPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGIIPGKSGLTSSMINTFLGNRALREASQEVAAEMAAQPCPTEVAKKLIAMLQHG
complement(1119163..1119279)       PROPHAGE_Salmon_Ty2: transposase; FORC50_1131; phage(gi29143766)                     1.37e-19            SalmonellaentericasubspentericaserovarTyphimuriumMGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
1119622..1119888                   PROPHAGE_Salmon_LT2: transposase; FORC50_1132; phage(gi16766077)                     3.42e-58            SalmonellaentericasubspentericaserovarTyphimuriumMRKARFTEHQIITVIKSVEAGRTVKDVCREAGISEATYYNWKSRYGGMEPSDIKKIKDLEDENRRLKQMFADLSLENRALKDVIEKKL
1120110..1120733                   PROPHAGE_Xantho_33913: ISxcC1 transposase; FORC50_1133; phage(gi21231060)            1.83e-89            SalmonellaentericasubspentericaserovarTyphimuriumMWNHKRIHRIYCLLKLNFRRKGKQRLPVRNPSPLATPEALNQSWSVDFMHDALVCGRRFRTFNVVDDFNREALSIEIDRNLPAPRVVRVLDRIAANRGYPAMLRMDNGPEFISLALTEWAEKHAVKLVFIQPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEVREITEKWLSEYNCERPYESLNNMTPEEYRQHHYLAGNSKNVWN
complement(1120789..1120971)       flagellar export component, Type III secretion inner membrane protein YscT,HrcT,SpaR,EscT,EpaR1; FORC50_1134     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMENPQLGWGFRKAFSFKPVIKTPFDLLKHLAVWQLQKFNKKSKGGPNGGRKELSAHPMEL
complement(1121529..1122332)       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; FORC50_1135; phage(gi109289966)     7.25e-75            SalmonellaentericasubspentericaserovarTyphimuriumMESNDPGKLIWHVACDESGIDGQRFYGFGSLWMKYQRRGDFARIVRELREKHNCSDEIKWQKAHSKRNAAFYQDLIETFFKHPWLAFHCIVVEKSKVEKSFHGGDYDLAMRKHFGKLIETKIGNVIKAHPDRECEFRVEVDPLPSRYKKADEEFHVITNHTLARRFGRKDIIKSVVSKDSKASEHIQIADFLLGAVMCAYQGKATSEAKLAVANNVASYLGWDSLMHDTWPTERKFNIWFFFDRSKGPRDIVTQEVKLTYALPNTRK
complement(1122731..1123324)       flagellar export component, Type III secretion inner membrane protein YscR,SpaR,HrcR,EscR; FORC50_1136     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPTPESLWKILASPISTKTAVRYGFLSVAIVLSIRFILPILKDIAPLTEQDLPGYSYAAHFALTILFSLIAETLTFELVAWMYLKLEKFIERRKLRKELARKQEIESKEIKRIQEKFIENFILAWPLIAPRYKYFVYELRRGHKGYSDTNSAINYLRQQGWIHPITELPYSHCLYRLDELIFEALNRIESAATATDS
complement(1123422..1123784)       tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGTGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
complement(1123856..1125046)       flagellar export component, Type III secretion inner membrane protein YscQ; FORC50_1137     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKINQHDAAMDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
complement(1125027..1127207)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; FORC50_1138; phage(gi9630145)        8.76e-25            SalmonellaentericasubspentericaserovarTyphimuriumMTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEDAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA

#### region 3 ####
1527945..1527956                   attL                                                                                 N/A                 GGATAGTGAAGC
1528291..1528995                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; FORC50_1505; phage(gi100027)     9.09e-175           SalmonellaentericasubspentericaserovarTyphimuriumMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
1529117..1530475                   putative membrane protein YqjD; FORC50_1506                                          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWKAALYMPAFGAIVVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEEELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPNVDMACMIIIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLVVVMIGEKRHHDELQLKRNGG
1530480..1531550                   PHAGE_Staphy_MCE_2014_NC_025416: glycerophosphoryl diester phosphodiesterase; FORC50_1507; phage(gi725948760)     8.22e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKTTLKNLSVALMLAGMTIGSGAVAAEKVVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKQDNVYLQCFDVAELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLVAEGSTKGNIKLTGMVQDAHQNKMVVHPYTVRADQLPDYATDVNQLYDILYNKAGVDGLFTDFPDKAVMFLQKND
complement(1531666..1532544)       PHAGE_Burkho_phi1026b_NC_005284: gp58; FORC50_1508; phage(gi38707948)                8.59e-07            SalmonellaentericasubspentericaserovarTyphimuriumMTLTQIHALLAVLEYGGFTEASKRLYMTQSAVSQAISALEEELGVDILIRERRKEIELTAAGSRIVRHLRAIQRDVNAVKEIAEQEKKNPARTLRIGCFPSACACILPGVIRYFESHHPNVKIIPYEENSTAIIDSLQDGSIDAGFVPFPVNGMYCVPIYRDKFTVVVPENHPLAANSTVTVEELMDEPLIVSKGRYELSIMALFKEKGIEPIFKYEFNHPDTALNFIRQGLGIALLPELTLKATTGKLCSVALEPTFYRQISLLAKEPPVEGSPLFLLQKCMETLTDEGLL
1532706..1533896                   Inner membrane protein YqjF; FORC50_1509                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKEKLWTKDFWAITIVSFIIFFVFYVLLTLLPIYIADRLHASADKAGLLVTCFLAAAIVIRPFAGQWVGKYSNKKILVLSSLAFLVITALYPVCHSIESLLFIRVLHGITFGVITTVKGTISARLIPASRRGEGISFFSLAMGLAMVVGPWIGLNMARWNAFTAAFWLCSAVAALGIVLSLIVTVPPVIRHADGSKPNLGFAAMFDRAALPFALVTFFMTFSYAGVSAFLALYARELDLMAAASNFLLCYAIFLMICRTFTGNICDKKGPKYVVFPCLLAFTIGLVALGYTNGSIMMIISGGLIGIGYGSVTPVFQTQIISSVEPHKIGVANSLFFNAMDAGMAIGAFIMGMMVESVGYRMIYVAGAVLVVLAGALYAVQMKKRGVMPLVSTSELH
complement(1533898..1534152)       PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; FORC50_1510; phage(gi100068)     2.67e-07            SalmonellaentericasubspentericaserovarTyphimuriumMGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDIEIEM
complement(1534152..1535282)       PHAGE_Erwini_vB_EamM_Simmy50_NC_041974: hypothetical protein; FORC50_1511; phage(gi100091)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDELIEMTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
complement(1535395..1537680)       PHAGE_Colwel_9A_NC_018088: ribonucleotide-diphosphate reductase subunit alpha; FORC50_1512; phage(gi392973311)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNQSLLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQFEPPALYHHVVKMVELGKYDNHLLEDYTEEEFKQMDSFIVHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLDYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGGDITLFSPSDVPGLYDAFFADQDEFERLYVKYEHDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPVVAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAIKTLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIVNEPLHYDWQQLRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLKDAYELLWEMPNNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLAPSIQDDGCESGACKI
1547895..1547906                   attR                                                                                 N/A                 GGATAGTGAAGC

#### region 4 ####
1843991..1844002                   attL                                                                                 N/A                 AATAAAGGAGAT
1850185..1850436                   PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; FORC50_1825; phage(gi414090415)     4.80e-06            SalmonellaentericasubspentericaserovarTyphimuriumMSKNVKQTSENVASTAAKTLTDPNASAIQKSLAGSALSQRGTSNQTSGKMEHKASSALDNPRSSELTKQLAASVLAQSNKGRK
complement(1850508..1851782)       PROPHAGE_Shigel_301: putative P4-type integrase; FORC50_1826; phage(gi24114228)      3.74e-179           SalmonellaentericasubspentericaserovarTyphimuriumMSLTDTKVKNTRPSEKAVKLTDGFGLYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLTQGIDPNAKKQADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELDTGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHRPALELEEIPLLLERIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKPMSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQKQ
1851812..1851835                   attL                                                                                 N/A                 CAAATCGAACCAGCTTTACCAGCA
complement(1851962..1852037)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
complement(1852446..1852634)       PHAGE_Pseudo_phi297_NC_016762: integrase; FORC50_1827; phage(gi374531312)            2.09e-07            SalmonellaentericasubspentericaserovarTyphimuriumMFSIGVYLAVSLTDARQRRDEVKRLLAQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(1852594..1852764)       Putative ribokinase; FORC50_1828                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSLTDTKVKNARPAEKAVKLTDGFGLYRFKILADRLSLQWQTEGVFYWGLPCGFSY
1852794..1852817                   attR                                                                                 N/A                 CAAATCGAACCAGCTTTACCAGCA
1852796..1852807                   attL                                                                                 N/A                 AATCGAACCAGC
complement(1852932..1853007)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
complement(1853108..1853905)       hypothetical protein; FORC50_1829                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
1853994..1854083                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
complement(1854197..1855153)       PHAGE_Salmon_ST64B_NC_004313: Integrase protein; FORC50_1830; phage(gi23505472)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(1855188..1855430)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1831; phage(gi23505473)     6.59e-55            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
complement(1855455..1856012)       PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; FORC50_1832; phage(gi23505474)     2.48e-137           SalmonellaentericasubspentericaserovarTyphimuriumMVDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
complement(1856021..1856884)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1833; phage(gi23505475)     1.56e-24            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLSDDDAKVLIVLKRALASLEAEPAGYHVIKECGKVGCSVATLEEAEKTRDFWNKKWTIRPYFYTAQPVQETGVYNDVLNIISLLENNEWAEHCTSTVLGSLLESEITRLVGKEQSAPVVTFYRDGVEAAAKWIDQQREAYDSEHGWSDPDTGAFEFGNDAQRGYSSTLEELAEGIRALHPNAGNSPVIPDGWISCSERMPEDEQEVIVHNKLGYRYVSYFDEHSGLFFDMRGGNQMNCIEHIFVTHWMPVPAAPKPEINNE
complement(1856881..1857174)       PHAGE_Klebsi_phiKO2_NC_005857: Gp43; FORC50_1834; phage(gi46402129)                  5.44e-46            SalmonellaentericasubspentericaserovarTyphimuriumMWRGLNRGGSQMILTAYEYDPETEKSQSVYLLRHHSKVKKTTLEQKLTVKNDAFGRFKPFVELEDFPEGLSEREAMLKLADWLHRLSVAIEDNWSTP
complement(1857177..1857275)       Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; FORC50_1835          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLVLQWHRQRAVQTKLVELRQKLNAAGIGKGK
complement(1857446..1857805)       PHAGE_Salmon_SPN1S_NC_016761: eaf; FORC50_1836; phage(gi374531242)                   1.74e-76            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKLNDHELVDLKNAIERELKRRADGPKVTTYYVVSCITDAQHFTDLDCALRCLKSVTENLMEWVTESPENRDYVNQCTGIVGAKLQVKEMNLDHFNMRVAEKYFDDICYPQETAQ
complement(1857802..1858317)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1837; phage(gi23505477)     3.68e-122           SalmonellaentericasubspentericaserovarTyphimuriumMSNRIRNAQVFDARTGEYPVDMYIRWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKLITNEIPIILADGPLYWRDMTRAEQLAFGRRPLPAVVLDEVTYKDRLAYFMAVNFTGVPQSEEHKRHVMQLMEAAQ
complement(1858314..1858544)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1838; phage(gi23505478)     1.32e-49            SalmonellaentericasubspentericaserovarTyphimuriumMKLEMYTLDGSVIVDSNLVTQFYPDYKSGGELTVIETISATGETFTVRVKHSFLQVTSALATAWSVDEKKAEGAAQ
complement(1858615..1859154)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1839; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
complement(1859249..1860166)       PHAGE_Entero_P1_NC_005856: HrdC; FORC50_1840; phage(gi46401690)                      5.64e-110           SalmonellaentericasubspentericaserovarTyphimuriumMHNPFFKNMLIYRFSRDFNIDIDSLDKKLELFRFSPCGSQDMAKSGWFSPLVQYSDVLYHAVNNQLLLVIRREEKIIPKQTIADEINKKVSTLEREQGRRLKKTEKDSIRDEVLHSLLPRAFTKNSLVRIWINTAAGFIVVDTSSIKRAEDSLALLRKTLGSLPVVPLTMENPIELTLTEWVRSEAAPSGFSIGDEAVLKAILEDGGTGRFKKQDLACDEILTHIEAGKVVTQISMEWQQRISFTLSCDGILKRIKFADQLISQNDDIDSEDVVQRFDADITLMTGELSNLISDLTAALGGEAKR
1860587..1860598                   attR                                                                                 N/A                 AATCGAACCAGC
1860736..1860987                   hypothetical protein; FORC50_1841                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSQKDDIPVFPVTGWQAGPLPGYDALVVKFQFLSSPMQPIESAQETQFLVLTPEMAESLASDLQRHIQDLRNSDVHSPQEGKH
complement(1860887..1861135)       Branched-chain amino acid transport ATP-binding protein LivF; FORC50_1842            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKHSYQLRSRDKASKTERHEGGMMLVNAKKSAITQRRFKGNEVVQVFLISACLLVGCERRNFANPEYAFASLKPGSQPSQE
complement(1861063..1861248)       PHAGE_Salmon_118970_sal3_NC_031940: recombination endonuclease subunit; FORC50_1843; phage(gi100052)     1.24e-18            SalmonellaentericasubspentericaserovarTyphimuriumMNNYYTCSFCGVSELDAKKLIAKGSKDEPAICSECVVSCVNILINYAAVIKPVKLNVTKGE
complement(1861454..1862149)       PHAGE_Salmon_ST64B_NC_004313: regulatory protein; FORC50_1844; phage(gi23505482)     3.68e-169           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLSVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
1862247..1862471                   PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; FORC50_1845; phage(gi23505483)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
1862500..1863054                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FORC50_1846; phage(gi100118)     1.69e-133           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINHRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCVPEKGDARECAAPGAVASNFMEKTNA
1863051..1864208                   PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; FORC50_1847; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLSNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRKRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYIDAFNQMEKQLSTPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLHDRINDAAALASLINMTLNRSEVRGRK
1864205..1864429                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FORC50_1848; phage(gi100121)     1.47e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
1864426..1865400                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FORC50_1849; phage(gi100059)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSSLIQLLDRPIAYNPAFAKLKAGKVKAGPVAAVFLSQLVYWHNRMDGGWMYKTQADIASETALTRDEQETARKRLVALGVLEEARRGVPATMHYRINTARLEALLLETAKPVKKGAQEKTRLRDFQNVETPQSGLVQPRKPDCGDAANKNVETPQTSTGQPNEQACGDPTIFPTGDYTETTQEITQESKTPFCPVAEQPDPEVTLTDQAIEVLTHLNQVSGSRYQKSKTSLENIRARLREGYSVADLQLVIDLKHEHWHENDEQYQYMRPETLFGPKKFESYLQSATRWDQKGRPKRADWGAKKRDVMAFGPVDTTIPEGFRG
1865397..1865870                   PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; FORC50_1850; phage(gi23505487)     4.46e-39            SalmonellaentericasubspentericaserovarTyphimuriumMSLLAKVQAFIELNPGLTSNEIADAFPEYARFDVQRSASKLYRCKRVNRRLDGDVFRYYAGKDEAVILTLRQKRSGHTGSGDPMVIAKLVSRAEELESRGLFNRASIVWLEAFSESQFIYEREEFLRRRQKCLNRIKKRIRPVEQVYLAGRFVGNVE
1865867..1866748                   PHAGE_Salmon_118970_sal3_NC_031940: thymidylate synthetase; FORC50_1851; phage(gi100061)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTSESVCIESSDVTISVDESASRTWRRPFLKWAGGKYSMLPDLYQVIPAGMRLIEPFVGGGSVFLNSDKHACFLLADVNTDLINLYQMLAVVPGAVIRHARVMFDRLNDAESYMALREEFNAQVMDAPERAAAFLFLNRHCFNGLIRYNRNNQFNVGWGKYPSPYFPEEEIRAFTEMAHNCVFMAAGFRRTLALAGEGDVVYCDPPYEPMPGKDGFTHYAAGGFTWDDHIALAECCVAAHQRGARVVIGNSTSPRVIDLYSQHGFEIRYISARRSISSKGSTREKAKDLVAIL
1866838..1867146                   PHAGE_Salmon_ST64B_NC_004313: holiday-junction resolvase; FORC50_1852; phage(gi23505489)     3.34e-63            SalmonellaentericasubspentericaserovarTyphimuriumMVSASGRKYQSEACAAVIEQLRRLPKPSTAPAAVEITLYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAA
1867163..1868023                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1853; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTRSLARAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQISSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGAPDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1868103..1869020                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FORC50_1854; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSVWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLESIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWINERYTRWVKSQPCACCGKQADDPHHLTGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1869034..1869786                   PHAGE_Entero_SfV_NC_003444: antitermination protein Q; FORC50_1855; phage(gi19549033)     2.02e-177           SalmonellaentericasubspentericaserovarTyphimuriumMNLEALPKYYSPKSPKLSDDAPATTSESLTITDVMAAQGMVQSKAPLGFALFLAKVGIQNPDFAIEGLIHYAVALDNPTLNKLSEETRLQIVPYLVNFAFADYSRSAASKARCEHCAGTGFHHVLREVVKHSRNGEPVIKEEWEKELCQHCHGKGEVSTVCRGCKGKGIVLDEKRTRFHGAPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQWYKGYADVIDKLVTKCWQEEAYAEAQLRKVTR
1869836..1870909                   PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FORC50_1856; phage(gi526244684)     2.75e-05            SalmonellaentericasubspentericaserovarTyphimuriumMDKILPTMGFVCLSLISLKNPPPSGFFICDHFIFCLAKLLYGQELKLSGDIVLSNNERWVSFFDFAFTPTHAAAPSIPIEDILKKLKVLVSSGSAVKLYNHRSRALRISEMKYSIGDSQATLLIQLCDKNGSDPVFGELTTGNLRVEPKLAGEGIAVSCHIVISTDVVKNTADHHKTLVESVPGISKSVLEPFLNAMLREAFAGCEFKNPATKGMCQHRPKLEIYSHGSQTLMDALKGAKIHNVKLVSTRRKGGLDQTAYTELSERSVKYKIIRQPPLKDKERLLEILRKKGQQSGYTKVSISYSKDGKQASLDLDRNEDAATKLFTKSERVILGNLINQCESTVHLQLETKMIGLL
1871291..1871494                   Putative receptor; FORC50_1857                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLFCLGMISILIGKPFHLWLLTFCSPDAILWLKTVFVGVYIFILMNIITTTLLGLYFLAVRFHQSSL
1871628..1871972                   PHAGE_Entero_mEp390_NC_019721: putative holin; FORC50_1858; phage(gi428782712)       3.04e-48            SalmonellaentericasubspentericaserovarTyphimuriumMGASVFGLATGTDYGVVFGAFAGAVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRIRGGGSDGSK
1871959..1872240                   PHAGE_Entero_mEp390_NC_019721: putative holin; FORC50_1859; phage(gi428782713)       4.91e-49            SalmonellaentericasubspentericaserovarTyphimuriumMVANDPSAALNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDALRH
1872240..1872857                   PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); FORC50_1860; phage(gi23505496)     5.44e-121           SalmonellaentericasubspentericaserovarTyphimuriumMNQQQFQQAAGISAGLSARWFPHIDAAMKEFGITAVNDQAMFIAQTGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLLQITGRENYVKCGAALKLDLISTPELLAQEKHAARSAAWFFTLRGCLMYSGDVVRVTQIINGGQNGLADRNSRYNKARAALLV
1872854..1873393                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; FORC50_1861; phage(gi16765210)     2.76e-76            SalmonellaentericasubspentericaserovarTyphimuriumMTAVFAFVKARWKTIIVLLMLAGAFLAGIIWSDRGWQKKWADRNSMESSQEANAQTAARWIEQGRIIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEATKLAARLDAAKHTSDLAAAVRSKTAGADAAVLADMLGRLAEEARYYAERSDESYRAGMTCERIYNSVRESTNNPIAPH
1873639..1873767                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1862; phage(gi23505500)     7.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMREAKTVDHIIPKAHGGTDADSNLQSLCWPCHKAKTARERLK
1874013..1874351                   PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; FORC50_1863; phage(gi23505446)     2.95e-13            SalmonellaentericasubspentericaserovarTyphimuriumMSDIAIRIWKTQSKILIERGVFDLEDAPLLLAYCNAFHLMIEAEKVIAEEGLTVSSEMGGEKKHPAVNVRNDSVSQLARLGSLLGLDPLSRIRMTSGKNDPDDEGNEFDEFD
1874351..1876081                   PHAGE_Entero_phiP27_NC_003356: putative terminase; FORC50_1864; phage(gi18249900)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMATYPNVNAANQYARDVVNGKILACRLTMLACQRHLDDLERAKDPHWPYRFDKNKAERFLRFSQKMPHTSGEWARRKLRIEFEPWQKFALGVPFGWVRKDTGFRRFTEIYIEVPRKNGKSAIAAAVGNYMFCADGEYAAEVYCGATTEKQAWKVFAPALAMVKKLPALRQKFCIKPWAKKMTRPDGSLFAPIIGDPGDGDSPSCAIIDEYHEHDTDALYTTMTTGMGAREQPITLIITTAGFDIASPCYEKRTQVVEILERIREGGENEAIFGIIYTLDDDDDWTQPEALIKANPNYNISVKEGFLKAKQLLAMSTPGQTNKILTKHFNKWVSSKAAYYNLQKWMTAADKTLRLSDFAGEECYPGIDLASKLDLNAVVPVFRREIDGLSHYYCVSPMFWVPEDTVYATDPALKTIADRYQSFVNQGVLVPSDGAEVDYRLILEAILKLRETVKIAASPIDPYGATGLSHMLQDEGLEPVTITQNYTNMSDPMREIEAAIAAGRFHHDGNPLMTWCISNVVGKYLPGSDDVVRPVKEGAGNKIDGAVGLMMGVGRAMLNEPKDFLSNLDPDEELLFL
1876078..1876236                   Putative PerM family permease; FORC50_1865                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKSLIIDVAGVAGFGALVGGIYLKFGAAVALMAGGSGLLLWALLAARRIKTC
1876230..1877447                   PHAGE_Entero_SfV_NC_003444: portal protein; FORC50_1866; phage(gi19548993)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLIDAIFRSNSLENPAVPVTVEAVENDGIFNGDVIVNPRTAMKLAAVYACIYVISSNVAQMPLHVMRRTGKKVETARDHPAFYLVHDEPNSWQTSYKWRELKQRHILGWGNGYTRVLRHRRTGEVTGLEACMPWETTLLNTGGRYTYGVYNEEGSFAINPDDMIHVRALGNDQKMGLSPVLQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKGELNDGSWKRLKEMWQKATAMLRSQENRTMLLPAELDYKALTVSPVDAQLIDMMKLNRSMIAGIFNVPAHMINDLEKATFSNISEQAIQFVRYTMMPWVTNWEQELNRRLFTRAEREAGYYVRFNLAGLLRGTAKERAEFYHFAITDGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKSTTQENTQDE
1877440..1878042                   PHAGE_Entero_SfV_NC_003444: capsid protease; FORC50_1867; phage(gi19548994)          1.05e-132           SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRLLDVSPVTYPAYQEADSAVRSMKAWQEARDSSALQKAINQRMARERVLTLLNA
1878052..1879281                   PHAGE_Entero_SfV_NC_003444: capsid; FORC50_1868; phage(gi19548995)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKLHELKQKRNTIATDMRALNEKIGDNPWTDEQRTEWNKAKSELEALDERIAREEELRRQDQTYVDENEEEQRNNQDPDKDPQQDEKRGQIFDKWMRHGASELSSEERKALRELRAQGVAPDEKGGYTVPDTFLAKVVEQMKSYGGIASVAQILATSDGRTMEWATADGTAEVGVLLGENEEAGEEDTEFGMDSLGALKMTSKIIRVSNELLQDSAIDMEAYLARRIAERIGRGEARYLIQGTGTGTPKQPKGLKASVTGTTQTAAAGAVKWQEILALKHSIDPAYRRGPKFRLAFNDNTLKLISEMEDGQGRPLWLPDIVGVAPASVLNVPYVIDQEIDDIGAGKKFMFCGDFDRFIIRRVRYMILKRLVERYAEFDQTGFLAFHRFDCILEDTSAIKALVGKGSASS
1879361..1879684                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; FORC50_1869; phage(gi19548996)     1.55e-48            SalmonellaentericasubspentericaserovarTyphimuriumMLLSPEEIKLQLRLDEDYADEDKFLELLGRAVQARTENFLNRRLYTAEAGVPADDPEGLILSDDIRMGMLLLVTHFYENRSTVTEVEKVELPMSFNWLVGPYRYIPL
1879681..1880085                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1870; phage(gi23505454)     1.20e-91            SalmonellaentericasubspentericaserovarTyphimuriumMKLRQAQASATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRAWAKKAQPGAAAYQGAVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNSKRRFLLLECEELGTDNGSDYAAESIFTR
1880057..1880569                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1871; phage(gi23505455)     3.03e-112           SalmonellaentericasubspentericaserovarTyphimuriumMPQKAYLHVDFEQPETLVFNRARMRRAFVSIGQVHMRDARRLVMKRGRSGPGDNPSYRTGKLARSIGYYVPRASSRRPGLMVKIAPNQKNGEGNRPISGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVAPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
1880566..1881126                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1872; phage(gi23505456)     5.62e-135           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDPQAHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
1881130..1881294                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1873; phage(gi23505457)     1.90e-32            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
1881284..1882780                   PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; FORC50_1874; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNTMATEMNDSSGRWSYIRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIRGELGSTYRQLEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
1882780..1883136                   PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; FORC50_1875; phage(gi23505459)      2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
1883133..1883459                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1876; phage(gi23505501)     2.05e-73            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
1883544..1885472                   PHAGE_Salmon_ST64B_NC_004313: tail protein; FORC50_1877; phage(gi23505460)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRASTTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLGRAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
1885506..1886846                   PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; FORC50_1878; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPDVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSFPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
1886843..1887901                   PHAGE_Salmon_ST64B_NC_004313: Tail protein; FORC50_1879; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDAVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGKNLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
1887901..1888434                   PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; FORC50_1880; phage(gi23505463)     3.75e-128           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGGRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
1888439..1888852                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; FORC50_1881; phage(gi23505464)     3.87e-96            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
1888845..1889924                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FORC50_1882; phage(gi100096)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIGDVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGADTEEPETWRARVMERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
1889927..1890514                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; FORC50_1883; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1890501..1892063                   PHAGE_Salmon_ST64B_NC_004313: tail protein; FORC50_1884; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRASGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
1892063..1892632                   PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; FORC50_1885; phage(gi23505469)     1.45e-138           SalmonellaentericasubspentericaserovarTyphimuriumMKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
1892767..1892916                   PHAGE_Entero_PsP3_NC_005340: major tail sheath protein; FORC50_1886; phage(gi41057373)     1.72e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSDFHHGTQVIQFNGGTRVTSTISIEIVSMVFTFSFAETLLAFISYVCK
complement(1892917..1893924)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FORC50_1887; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
1894137..1894358                   PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; FORC50_1888; phage(gi23505471)     2.83e-47            SalmonellaentericasubspentericaserovarTyphimuriumMFLLYCRGTGEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
1894474..1894485                   attR                                                                                 N/A                 AATAAAGGAGAT
complement(1895140..1895259)       Phage-like lysozyme; FORC50_1889                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRSRSLTANVTLFTWLHFSSSFRPQHAYQQVSLLSDCFA
1895701..1896519                   Putative regulator; FORC50_1890                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQLPEQDEFSDFFAANDDEQASLRRKFFLEKHKEPCLSESALEDYQALFMSIYGINIDWKEGTFSLLEALSDNQGGKPVTVKFDYDSEIETATINLVDTQYVFHHYPMGSDGFDTELVRIEHILANSGYSLRVYQNSTFSDTLSFLLIPSDEWKRVEQHYSPEHISEYFVPYGKQLVIPEVTAPVVNYVPSVKQEASNVPALFNARGIRICFLSIMLIAFAIYILWNILTKIEPLSSGQPAGCENLQNLYSKLRPEVAEPLKEKMRKSLGCK
1896693..1898003                   PROPHAGE_Shewan_MR-1: IS110 family transposase; FORC50_1891; phage(gi24375433)       4.16e-74            SalmonellaentericasubspentericaserovarTyphimuriumMTLINFVAANQKYYAFNLLSVFIMVFWSVQYLLQHLLVQTQVSHQLLQPLILILQLPQTPQFRHARPGKFFLPVNGMDYFLPLRLTVRNVLTRRITMNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYWQREFEKLGHKVKVISPQYVRPFVRGQKNDGNDAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRIVNHRTATVCQIRGLLLDRGIPIGSAVSRARRAIPLILEDAENGLSSRMRRTIAELYDLFNDLGRRIHFFDKEIETVFRQSEACPRIAKVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNDTGYQVVCN
complement(1898176..1898325)       PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; FORC50_1892; phage(gi17546157)     2.61e-15            SalmonellaentericasubspentericaserovarTyphimuriumMKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYIYGLPPFCKY

#### region 5 ####
2420509..2420520                   attL                                                                                 N/A                 GTAAAAAAATTG
complement(2430516..2430854)       PHAGE_Acinet_ZZ1_NC_018087: putative quaternary ammonium compound-resistance protein qacE; FORC50_2456; phage(gi392973036)     3.10e-13            SalmonellaentericasubspentericaserovarTyphimuriumMTKEAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYAIWSGVGIVLIGLIGWLFLGQKLDMPAIIGMLLIICGVIVINLFSKSVSH
complement(2430847..2430999)       STMF1.14 protein; FORC50_2457                                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRMVRITATNASTFLWQDTQWFKSVFILSSVLLKISSRPEKYWNEEMYD
2431018..2431158                   PHAGE_Entero_phiP27_NC_003356: putative integrase; FORC50_2458; phage(gi18249865)     6.30e-16            SalmonellaentericasubspentericaserovarTyphimuriumMTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
complement(2431494..2431676)       hypothetical protein; FORC50_2459                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPRMAAKWALVAILVPFLLVGCASLDKARQIFEAAGQSRSERLLGLKSKSPVVADNWGFL
complement(2431700..2432245)       PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; FORC50_2460; phage(gi422935930)        1.04e-86            SalmonellaentericasubspentericaserovarTyphimuriumMKPKDEIFDEILGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRNLTRGQALEILETDYWYGPRFDRVAKASPDVAAELCDTGVNMGPSVAAKMLQRWLNVFNQGGRLYPDMDTDGRIGPRTLNALRVYLEKRGKDGERVLLVALNCTQGERYLELAEKREADESFVYGWMKERVLI
complement(2432242..2432523)       PHAGE_Entero_phiP27_NC_003356: putative holin; FORC50_2461; phage(gi18249893)        2.47e-24            SalmonellaentericasubspentericaserovarTyphimuriumMESNLTGTLNAGLCLVTVLALFLYRRNGARYKPGIAWLSYLLMLGYALVPFRFLAGHYPSSSWPVVLMNALFCGLVLWARGNVSKILSLLRLR
complement(2432623..2433018)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FORC50_2462; phage(gi100118)      1.12e-62            SalmonellaentericasubspentericaserovarTyphimuriumMLGIFRKKTRKAIVEVKKMENRDAVEATVWGAYSIAYADGTCDAKEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAQALRELADVAGTAEAVDVLCLYWPRSCPALLTTTVNRWMRCVQW
2433628..2433801                   Thiazole biosynthesis protein ThiH; FORC50_2463                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVSHHDPQTKINAPHILFMPHFMWVSLHSDGVPQIPYVLQEHQTVAQAMTVFLQYAI
2433807..2433818                   attR                                                                                 N/A                 GTAAAAAAATTG
2434152..2434164                   attL                                                                                 N/A                 TAATTCAAAAAAG
2435016..2435156                   Thiazole biosynthesis protein ThiG; FORC50_2464                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFNNPDYTGEYFSVLQKRQNPHDGGFQNAFMSVISLAIQLCEAYWN
complement(2435189..2435725)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; FORC50_2465; phage(gi100055)      6.94e-07            SalmonellaentericasubspentericaserovarTyphimuriumMIYPTNTGKSGEHLRLSTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAINDALRRMKKAGLEKPELEVFLREMINGKQKSWLAHCTDTEALIIDRVVGEVLTDHPGLLGILNQRYVGRGMSKRRMAELLNEQYPEWALITCRRRVEQWLSIAEFILYSPMRKAFDYA
complement(2435722..2436012)       PHAGE_Shigel_Stx_NC_029120: hypothetical protein; FORC50_2466; phage(gi985761275)     1.41e-30            SalmonellaentericasubspentericaserovarTyphimuriumMADLRKAARGLMCTVRIPGHCNHNPETSVLAHYRLAGTCGTATKPNDMQAAIACSSCHDIVDGRVKIDDFTKTEIRLMHAEGVFRTQEIWREKGIL
complement(2436012..2436611)       PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FORC50_2467; phage(gi435439315)     1.47e-71            SalmonellaentericasubspentericaserovarTyphimuriumMAHLQLVKQTSSGLLLPATPESEDFLRSVKIGAWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPIGGAILPQEQELITGFVDFLCESAAQGHSPALSDAAEQYLHKVAVNRTLDVALLKSFDAFREWVTIQAGFYTEHYYPDGSRGRRAKSIAFANMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
complement(2436674..2436844)       Thiamin biosynthesis protein ThiC; FORC50_2468                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKKLKDLLELDEDGLYAVRVKNGEISFCTLIPDDHLILSVEAFIDYLIRLGFTVSY
complement(2437135..2437290)       PHAGE_Entero_933W_NC_000924: host killer protein; FORC50_2469; phage(gi9632541)      1.17e-25            SalmonellaentericasubspentericaserovarTyphimuriumMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
2437717..2438649                   NADH pyrophosphatase; FORC50_2470                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMHSVNFYSFRVLTHKGSRASKKLNDLGLSNKKTAYELFVDYFTLYKNTPIEFGVSKTKISLEQHTKLHFDNTKKIIYGYIKVGKYGESSEIKDVKLKKVHYRTTAYDVTLKERYILIYLPDNLEEGIIAFHSCDNISARGVLSDSITEYLKKQFQLEARINPLHHKKIPQYILNSELKQIKAQGYKAPEDIADSFGKNKTNIKTDLIIKANDGIFGSFRDLRNKNIGNIIEIIEDKCDAIKVSLQLGSRTVVFNYDTILKKGISAELDDNDLKINPLTGIPDLTALHDTIKNLSNDILEELHCGNKGVII
2438646..2439200                   Uroporphyrinogen III decarboxylase; FORC50_2471                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKINVLGVIIKHYKTMSDQRGTMLMSDITVHFIVPLSLSFVLCWTYGIMKPAIASVFVNFGAITTALLMSAVIMIYEQKQKTITKISDIIEGNKSRDKLISLNTNKTIYEQLCHNVAYAILTSIVLVIFSVIIYFLPDNAVDLMKWYFRAPAYIVSFLAYTSFFITVITFLMVIKRFSTILDN
complement(2439362..2439652)       PHAGE_Shigel_Stx_NC_029120: LygF; FORC50_2472; phage(gi985761265)                    1.27e-21            SalmonellaentericasubspentericaserovarTyphimuriumMTGLTIYSTRHYLDKAERCGDVYQAGRRGGIFPSEEAYRAWKKQAKVDADLIWKLPDGEVRRYDRHHNVICRECRKSEYMQRVLAFYRGNFQEVLL
2439964..2440431                   PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; FORC50_2473; phage(gi56692918)     1.71e-10            SalmonellaentericasubspentericaserovarTyphimuriumMRKKREEIAPPEATQRLRAIWDAKKRDLKLTQEIAADLMGFETQSTVSHYLNGKAPLNTDAALKFSVLLRVKPEELRPDLADLMNYVRSSGTYDDNFEGGGWRMVSRQQADLLNLFDILPESEKEKLIDRLKGQNELYKEAFQNMLAAQKRLKNQ
2440664..2440804                   DNA-binding protein HU-alpha; FORC50_2474                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGRNEVIQYLMDSCNVSFSAALQALRDNGWDMFLAQCELQEQYYPG
2440807..2440971                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; FORC50_2475; phage(gi472340166)     7.43e-11            SalmonellaentericasubspentericaserovarTyphimuriumMDKLQKIHLGNNESLVCGVFPNQDGTFTAMTYTRSRTFKTETGARRWLERNSGE
2440973..2441089                   PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403: hypothetical protein; FORC50_2476; phage(gi414087578)     1.19e-05            SalmonellaentericasubspentericaserovarTyphimuriumMDFDTIMEKAYEEYFESLDEGEEALSFSEFLLALSANG
complement(2441079..2441600)       zinc sigma-54-dependent two-component system Sensor protein; FORC50_2477             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSETALVIVKFLIGKSVGQFMLTVALFFLIIIFIPRDITELIEARSDLPYAVQIFSFAVAYLIVLILKVTGYFFVSALPLCQRRGRAKRMLKTLNSLSTEQLFLLEPFLKTHSPTFRASWDNPDADALVKAGIVRPAGSCIDGVSVMFKIEPEYESLMLSTWNPCTKRFDISR
2442038..2442259                   PHAGE_Shigel_Stx_NC_029120: Kil protein; FORC50_2478; phage(gi985761255)             1.16e-40            SalmonellaentericasubspentericaserovarTyphimuriumMIAHHFGTDEIPRQCITPGDYVIHDGRTYIASANNIKKRRLYIRDLTTQRCITDCMVKVWLNRNGLPAKAESW
2442542..2442661                   Phosphoribosylamine--glycine ligase; FORC50_2479                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLLKMNEAPPENFISLLKLMECKELVTNAFCSMKNESLH
2442689..2443306                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; FORC50_2480; phage(gi985761253)     1.22e-47            SalmonellaentericasubspentericaserovarTyphimuriumMSDNKTEYSYYIKVKNESARKRLGFPFAFWWKTESSEAAATARLAVSMLDAGFEPTDFAKPVRVNSPAVNELPPEGSFDTTFCQKYELGGEDGKTFMLIPGTPATDAHDEKTEECADDAGTEESGTDTSDNDECQDCEVSVATLPFPQRVLHIFTYAATDKKYLHHATRAQRRHITVLEMEQENSYIQNLLMVLRKSEQVHAQDE
2443299..2443571                   PHAGE_Entero_phiP27_NC_003356: putative integrase; FORC50_2481; phage(gi18249865)     4.37e-32            SalmonellaentericasubspentericaserovarTyphimuriumMSKGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS
2443623..2444558                   not available; FORC50_2482                                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQEIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIVRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALEALRLDVIEVK
complement(2444602..2445975)       PHAGE_Entero_CAjan_NC_028776: helicase-like protein; FORC50_2483; phage(gi971742387)     3.74e-06            SalmonellaentericasubspentericaserovarTyphimuriumMTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPSLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
2446300..2446312                   attR                                                                                 N/A                 TAATTCAAAAAAG

#### region 6 ####
2655547..2655561                   attL                                                                                 N/A                 GAATACGATTCCTGT
complement(2660661..2660897)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; FORC50_2717; phage(gi16765208)     9.15e-47            SalmonellaentericasubspentericaserovarTyphimuriumMNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2661110..2661541)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; FORC50_2718; phage(gi16765208)     2.67e-91            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVVADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPDSVARQIVLI
2661967..2662101                   hypothetical protein; FORC50_2719                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSPHLLDTNPVADLVRCRTSPILTTQRRRYLDGCEYMQVQEHH
complement(2662117..2662713)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; FORC50_2720; phage(gi169257320)     5.26e-120           SalmonellaentericasubspentericaserovarTyphimuriumMGEVQTKAPLDSLALTGTPTAPMPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYVGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEY
complement(2662706..2663080)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; FORC50_2721; phage(gi169257299)     3.62e-69            SalmonellaentericasubspentericaserovarTyphimuriumMFRDGSFLQIGWPSITVFSSSDYKRVALTDYDRFPEDIDGEGDGFSLASKRTTTFMSAGMTPAESSPGREITDVKWRRSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGDWFQSAMENMVGYG
complement(2663100..2663279)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; FORC50_2722; phage(gi169257185)     6.07e-29            SalmonellaentericasubspentericaserovarTyphimuriumMTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPK
complement(2663266..2663757)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; FORC50_2723; phage(gi169257298)     1.78e-36            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRFWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVVDEARILLVKAIQETADDDGE
2663812..2664000                   D-Glucosaminate-6-phosphate ammonia-lyase; FORC50_2724                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
2664065..2664232                   D-glucosaminate utilization operon 2-dehydro-3-deoxyphosphogluconate aldolase; FORC50_2725     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
2664385..2664504                   Putative BglB-family transcriptional antiterminator; FORC50_2726                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSTYQFHLVKNLFLFIWFHLMICSHFFTAILQGEFQCLL
complement(2664489..2665022)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; FORC50_2727; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2665076..2665306)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; FORC50_2728; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2665337..2665990                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; FORC50_2729; phage(gi169257272)     1.20e-15            SalmonellaentericasubspentericaserovarTyphimuriumMPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPAPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVQEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2666008..2666619                   PHAGE_Entero_HK022_NC_002166: integrase; FORC50_2730; phage(gi9634144)               8.51e-53            SalmonellaentericasubspentericaserovarTyphimuriumMALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEYLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLQAPGLRPGRLSIAADW
2666634..2666903                   PHAGE_Entero_HK022_NC_002166: integrase; FORC50_2731; phage(gi9634144)               3.53e-15            SalmonellaentericasubspentericaserovarTyphimuriumMISAGIRKNSPTGNIHPDGLTKKFVKARKISDVKCSDNPPTFHEIRSLLGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
2667030..2667059                   attL                                                                                 N/A                 AAATAAAAAGAGACCGAATACGATTCCTGT
2667848..2668648                   Trehalose-6-phosphate hydrolase; FORC50_2732                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVFLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINLLYRVNLDEIQLTNPFKFI
complement(2668763..2668915)       PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; FORC50_2733; phage(gi169936026)        1.99e-14            SalmonellaentericasubspentericaserovarTyphimuriumMERELIVERTSAGLAAAREQGQIGGRRPKLTTEQWAQPGASLGPEYRDSR
2669128..2669850                   Trehalose operon transcriptional repressor; FORC50_2734                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP
complement(2670052..2670345)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; FORC50_2735; phage(gi169257321)     3.50e-56            SalmonellaentericasubspentericaserovarTyphimuriumMPENVTSVSPDGEYQKWDGKAWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPS
complement(2673614..2673895)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; FORC50_2737; phage(gi169257315)     3.30e-58            SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGTVCRAC
complement(2673905..2674600)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; FORC50_2738; phage(gi169257314)     9.41e-173           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPGADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
2674918..2675223                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; FORC50_2739; phage(gi169257313)     2.06e-66            SalmonellaentericasubspentericaserovarTyphimuriumMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(2675340..2675519)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; FORC50_2740; phage(gi169257312)     1.66e-35            SalmonellaentericasubspentericaserovarTyphimuriumMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(2675596..2675910)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; FORC50_2741; phage(gi169257298)     4.94e-71            SalmonellaentericasubspentericaserovarTyphimuriumMDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSV
complement(2676118..2676597)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; FORC50_2742; phage(gi169257297)     6.25e-115           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
complement(2676615..2677064)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; FORC50_2743; phage(gi169257296)     3.42e-106           SalmonellaentericasubspentericaserovarTyphimuriumMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2677051..2677386)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; FORC50_2744; phage(gi169257295)     2.16e-75            SalmonellaentericasubspentericaserovarTyphimuriumMKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2677705..2677977                   hypothetical protein; FORC50_2745                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYPILMTARYFQTFQNTKIILRNYASNMMVLLPMIKPGWNQCVLLNTLSLDQEEWILISKLMMIPMMNAVRCYHAYLKMHTLKAGHSAD
2677869..2678342                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; FORC50_2746; phage(gi169257294)     2.06e-111           SalmonellaentericasubspentericaserovarTyphimuriumMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELRDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2678703..2679152                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FORC50_2747; phage(gi169257293)     1.10e-105           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENSLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2679149..2679286)       hypothetical protein; FORC50_2748                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMHNDPHSMDSQSIFALIASLTFFDCESLQIAAGPDTTTVPGGVMC
complement(2679526..2679789)       Protein yjgK; FORC50_2749                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLEISEDFNACGSKFCIDAREEVANHWLKFGTWAEPPMFIERSLIIPGESGLHLMEGHTRLGTLLGAIKYKFVQLADTHELYIASQK
complement(2680147..2680836)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; FORC50_2750; phage(gi169257244)     5.53e-112           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLEYVRQQLIVATADLSGATKGQLQAWLENAQLYTKNYPRKKQRIRDEVTGKMITLNNPPIAGKQSLAKGSAIPLVQPVEYSTSSWRRALLSLEEHNKAWLLWNYSENTCWEYQVTVTRWAWEKFSQQLEGKRVAKKTLARLRQLIWLAAQDVKAELARRETYEYQTLAELMGVAKSTWTETYMSHWLVMRNSFKRLDSDALISVTRSRSQQKATNLDISLAKPN
complement(2680966..2681193)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; FORC50_2751; phage(gi169257288)                 3.59e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKMTWFQHPVCTTEEADELVAGYRRRGVKVERYGEAEVLELESNNTPQRWTVEELKEIRIAALADLRALKKLEAA
complement(2681190..2681789)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FORC50_2752; phage(gi169257286)     2.14e-70            SalmonellaentericasubspentericaserovarTyphimuriumMAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWMPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2681853..2682071)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FORC50_2753; phage(gi423262436)     6.71e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKNLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDTLINELTIRAGYHE
2682508..2682633                   putative exported protein; FORC50_2754                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMPVNHTGIMANRHRKACWPDSQAIESRNNQLLSSDEKGCA
2682614..2682772                   putative exported protein; FORC50_2755                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKKAVHNRIRTDWYQGHVLQQQIHKMKQDIKNEGKIEYKKRTELSEVTSLQH
complement(2682790..2684757)       Aspartate N-acetyltransferase; FORC50_2756                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIVKSFALAGLLSSTALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAGLPEEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTDGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKAGMDLYFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDASGQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKADFDQGNYRWVAQVVSKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHINGEKAGNARAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATITLNRDTLNKIILKEETLKQAQDKGEVNVTGNAAKLDEMLGYMDKFEFWFNIVTP
2685436..2686515                   PHAGE_Entero_HK022_NC_002166: integrase; FORC50_2757; phage(gi9634144)               2.82e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSRKKYDANLPRNLTYRKASKSFFWRNPLTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
2686651..2686680                   attR                                                                                 N/A                 AAATAAAAAGAGACCGAATACGATTCCTGT
2686666..2686680                   attR                                                                                 N/A                 GAATACGATTCCTGT

#### region 7 ####
2891100..2891114                   attL                                                                                 N/A                 GCTACATTTTTATAA
2891420..2891611                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; FORC50_2986; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2891882..2892568                   Ferredoxin-like protein FixX; FORC50_2987                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
2892565..2892744                   Putative metabolite transport protein yaaU; FORC50_2988                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIVNLYQDNYSGYRQHGGSGVGGSNPLVPTKIPLKNQPVRAVFFMAQFPTGKLWGETGE
complement(2892797..2892946)       Putative lipoprotein; FORC50_2989                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQSVHTYETSSRQTESIGQGENVARSGNDLQGIYTVIRNENLCIDEFRN
2892928..2893554                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; FORC50_2990; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(2893686..2893934)       PHAGE_Stx2_c_1717_NC_011357: transposase; FORC50_2991; phage(gi209447153)            2.73e-30            SalmonellaentericasubspentericaserovarTyphimuriumMEIDNNICENALRCVALGRRNYLFFGSDRSGEAAAIIYSLLGTCKLNGVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(2894202..2895170)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; FORC50_2992; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2895265..2895501                   hypothetical protein; FORC50_2993                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVVLPWRASEGAEEKSVMMTGWRDCHFTAKVSIFSGSLSTMTRSSGISARAFNFGGQKSPGRNYLTMQIMPLRTGAQN
complement(2895648..2896229)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; FORC50_2994; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(2896229..2897938)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; FORC50_2995; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIIGFGNNVVSSLAADITASQTTIQVMPGVGAMFANLLTSDYANSSNPLKTYAKITLTDAKETVFEVCHLTAVNNDMLTVIRGQEGTTAKGWSLNDVIANFATRGSENQFVQIEELQSGHYVAGVAGGTENNLTLELPATYFVNGGVDWTLRTPLVVIPALNNTGASTLQLTMGGRVLGIFPLYKGNKAELSANDIIKDIPVLCVLDNTKTYFSVLNPLEIYLGSRYLQKDQNLSDVPDKAKGRSSLEVYSKTESDENYMAKSQCGADIPNKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQVTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2897935..2898561)       Dihydrofolate reductase; FORC50_2996                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAALLESIIPAYPYTQYNDDPDIVAFFDAYNKLAQGYLDYFNNLNLPCWTSPAITGELLDWIAAGIYGESRPLLQISEDAIARGAYNTIEYNNVAYAKLRNYVPGSASYVPDDYFKRILTWNFYKGDGSHFCINWFKRRLARFIHGANGIDPPVQSTFDISVMPDKGIFFVSIPDYGDGVGHFLKDAIDQSLVKLPFIYTYSVTVVEQ
complement(2898545..2899174)       Bis(5'-nucleosyl)-tetraphosphatase; FORC50_2997                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYGVQGTPDCYRIELKNVYGVQENLISYRQASLGAWVAIAGGGDPYEVAYAIYKAVPDISVLTNDVVNPSGAAVDKKTIPIIVYPDTYHVPFVVPSSQNVTLLITWNTASTSYIDPTGIEKAVQQSIADYINGIATGEPINIFLIRDIFLNQVKGLVSSNLVSMIDIQVGINGKIVPPATDSSLVYGDTYAYFSTSSSQIQVKQYGSSS
2899195..2899605                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; FORC50_2998; phage(gi169257271)     1.46e-44            SalmonellaentericasubspentericaserovarTyphimuriumMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2899640..2899654                   attR                                                                                 N/A                 GCTACATTTTTATAA
2899800..2901002                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; FORC50_2999; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 8 ####
3314193..3315047                   PHAGE_Vibrio_Aphrodite1_NC_042100: hypothetical protein; FORC50_3398; phage(gi100055)     1.15e-05            SalmonellaentericasubspentericaserovarTyphimuriumMDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTVTQGEAQLEMPTGDAMTLTPGKVVILPQNSAHRLRQSGEAPTHIVCGSLRLHTTSRYFLTALPEVLCLAPPLHSPASIWLNAAILLLQQESERHLPGADVLYSQQCATLFTLAVRDWLSQAGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVETLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASESSFHKAFVREFGCTPGEYRKRVSALER
complement(3315098..3315277)       TetR (AcrR) family multidrug efflux pump acrAB operon Transcription repressor; FORC50_3399     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRPKAMTVAVIIAGLLPVLWGTGAGSEVMSRITAPLLSLFIIPAAYKLMWLRRHRRLAA
3315386..3315715                   Potassium efflux system KefA protein / Small-conductance mechanosensitive channel; FORC50_3400     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRRAISNLLSNTMRYTPPGKTITLRIKEADDQIHIIVENPGTPIAPEHLPRLFDRFYHVTPSRQRKGEGRGIGLAIVKSIVTAHQGKVSVTSDTRATRFILTLPKYLR
3315915..3316160                   Putative transposase; FORC50_3401                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMESRQLSATAHEMMNNGDAFAHQQMAQTQKTSAPATVENATSFSEMDGYEKAMVIHQSMNNAHSFSHEIQAEEHHKQIKRN
3316670..3316945                   PHAGE_Salmon_SPN9CC_NC_017985: bactoprenol-linked glucose translocase; FORC50_3402; phage(gi389060491)     1.52e-60            SalmonellaentericasubspentericaserovarTyphimuriumMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
3316942..3317868                   PHAGE_Salmon_SPN9CC_NC_017985: O-antigen conversion protein; FORC50_3403; phage(gi389060490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDTVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGVLSWVGGKTDIVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKKRPKYIIKNEKKNG
3317861..3319501                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; FORC50_3404; phage(gi221328637)     6.32e-102           SalmonellaentericasubspentericaserovarTyphimuriumMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMDIKTFVIFEFNKNPADSLDEKTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINDIDSNELESITSGTWDVRTGARTNENITEIIK
complement(3319558..3319716)       PHAGE_Salmon_Marshall_NC_022772: tailspike; FORC50_3405; phage(gi568191873)          1.47e-17            SalmonellaentericasubspentericaserovarTyphimuriumMGFGHMRILACIGQLPESGLMHYGSVGFFFGTDGALRLLAKKPDGAFVTYDM
3319888..3320106                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; FORC50_3406; phage(gi557307550)            2.93e-26            SalmonellaentericasubspentericaserovarTyphimuriumMSGKRYPEEFKIEAVRQVVERGHSVSSVATHLDITTHSLYARIKKYGSNSSTNKEIKSSQMIRPKSADSRKS
3320283..3320555                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; FORC50_3407; phage(gi557307549)            3.09e-42            SalmonellaentericasubspentericaserovarTyphimuriumMSRRGNCHDNAVAESFFQLLKRERIKEKIYGTRDEARSDIFDYIEMFYNSRRRHGSSEQMPPAEYENLYHQRLRSVQVIRGDSQICSPCA

#### region 9 ####
4050207..4051211                   Phage holin; FORC50_4138                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVISLKNRNFLKLLDYTPAEIQHLIDLAIELKAAKKAGCEKQTLIGKNIALIFEKTSTRTRCAFEVAAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIEYRGFGQHIVEELGEYAGVPVWNGLTDEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLIAPKSFWPDAALVAQCREIASVTGARITLTESVEDGVHGVDFLYTDVWVSMGEPKEAWAERVSLMTPYQVNQQVVNATGNPDVKFMHCLPAFHNEHTKVGREIEMAYGLKGLEVTEEVFESAGSIVFDEAENRMHTIKAVMVATLGD
4051267..4052670                   Phage lysozyme; FORC50_4139                                                          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMEENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM
4052744..4052860                   Phage outer membrane lytic protein Rz; FORC50_4140                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIGFSFSCKTARLIRNRCDKCDEFRQSVDINNKDKVHL
4052857..4053345                   Attachment invasion locus protein precursor; FORC50_4141                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKEYDDYSAKEQQQLAVCQRLISEKSYLSQEEIRRDLQNEGFEGISQSTVSRLLKLLGAIKIRNTKGQKIYSVNPQRRPSPDAGRSIAEMVVSVEHNSEFILIHTAAGYGRAVARILDYHALPEILGVVAGSSIVWVAPRVVQRTALVHKQINYLLKMNLNS
4053573..4054508                   Superoxide dismutase [Cu-Zn] precursor; FORC50_4142                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGQVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHIAMVGDLKYGRTVHSLTQALAKFSGNRFYFIAPDALAMPQYILDMLDEKGMAWSLHGSIEEVMADVDILYMTRVQKERLDPSEYANVKAQFVLRASDLNGARENMKVLHPLPRIDEITTDVDKTPHAWYFQQAGNGIFARQALLALVLNSELSL
4054521..4054982                   Phage minor tail protein; FORC50_4143                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTHDNKLQVEAIKCGTVIDHIPAQVGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLTEEQVNQLALYAPQATVNRIDNYDVVGKSRPSLPERINNVLVCPNSNCISHAEPVSSSFAVKKRANDIALKCKYCEKEFSHYVVLAN
4055059..4055445                   Phage tail assembly protein; FORC50_4144                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPKTGAVAEDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
4055520..4055966                   PROPHAGE_Xantho_306: ISxac2 transposase; FORC50_4145; phage(gi21244663)              9.07e-06            SalmonellaentericasubspentericaserovarTyphimuriumMVRARFTEEQIADFLQQSKNGVPNKALCEEYGFSNSTLRRWQEKHAESIRQELKQIESTAKIVFLCFIVAAILLTLMFPKPTAALAIPPYLVYCISYIRRFRRISAKHIRRWDISSSRSGLGAENVFYKLSWTFLFFMPAYSILQLLE
complement(4056082..4058838)       Phage tail fiber protein; FORC50_4146                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPEEFSAPDFGAEGLPMLKTITRQLFARLNRHLPYRLVHRDPLPGAQTAVNATIPPSLSERCLKVAAMEQETLWRVFDTHPEGLNAAEVTRAREKHGENRLPAQKPSPWWVHLWVCYRNPFNILLTILGGISYATEDLFAAGVIALMVGISTLLNFVQEARSTKAADALKAMVSNTATVLRVINENGENAWLELPIDQLVPGDIIKLAAGDMIPADLRIIQARDLFVAQASLTGESLPVEKVAATREPRQNNPLECDTLCFMGTNVVSGTAQAVVMATGADTWFGQLAGRVSEQDNEQNAFQKGISRVSMLLIRFMLVMAPVVLIINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKPSEHVLHCAWLNSHYQTGLKNLLDTAVLEGVDETAARQLSGRWQKIDEIPFDFERRRMSVVVAEDSSVHQLVCKGALQEILNVCTQVRHNGDIVPLDDNMLRRVKRVTDTLNRQGLRVVAVATKYLPAREGDYQRIDESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGDVIIGSDIEGLSDDALAALAARTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFSNMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDEEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRLPFIQSRAAWPLMAMTLLVMVVGVSLPFSPLASYLQLQALPLSYFPWLIAILAGYMTLTQLVKGFYSRRYGWQ
complement(4059071..4059190)       Phage tail fiber protein; FORC50_4147                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRFCILFSRGVTLMVIKRVTLLKRRAMGKVWFIVGLIT
4059174..4060121                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; FORC50_4148; phage(gi100002)       1.71e-13            SalmonellaentericasubspentericaserovarTyphimuriumMQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNIDGVVLFGFTGITEELIAPWKASLVLLARDAQGFASVCYDDEGAIHILMQRLYEQGHRNISFLGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCATDTLALGASKYLQEQRIETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAASQLIEQINGRCDPRRIVIPSTLA
4060259..4061677                   Phage DNA invertase; FORC50_4149                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSKVKQADIDRLIDLVGGRDNIATVSRCITRLRFVLHQPANARPKKIEQLPMVKGCFTNAGQFQVVIGTDVGDYYNALLETTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLALGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVIANGIGVGGLPGILSIPPRYWQVYSMAMVIAIVIPVILTTFIYQRKHRQGTLQIV
