gi|00000000|ref|CP020339.1|  Shigella flexneri 4c strain 0702 chromosome, complete genome. 4646872, gc%: 50.86%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
420..433                           attL                                                                                 N/A                 GGGAAAATATCATC
complement(444..689)               PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; BS653_00010; phage(gi966201425)     8.46e-17            Shigellaflexneri4cMAKNDAVIHVHTPFVLTLPDGSRREFVKGRHVVEEDVATHWFTRAHAEVSVGKATDARNEVKNAKELRCTGNSGHYHLFFF
complement(731..1671)              hypothetical protein; BS653_00015                                                    N/A                 Shigellaflexneri4cMITFDQATVDSSGAFLIGSWRDSTRRTCHWWGTPGAAIFNCVKTPPSQMTFPAGRIPASPLRVLAQIRMEKTGAKTQPLLLATWISANPVTRTCGGWNLAGRSNCRLLSRSAARLIRRSMTVCNNGRWITMNRYMLAIPHTKALLPWTACLSTTLPKRGQPQHRTKSAQALTRCCLMRGPLLVTLWFRVICSRLSSLLCCPASSFHLQVTSPCRTFRPTPSAITRTVFRISARLNGKAVVWGIRIALRTPTIKNTSATRWFRFRACRCSIAVCIRSSLTTASWVQSSQCTKKPFRTLMAFAA
complement(1816..2172)             hypothetical protein; BS653_00020                                                    N/A                 Shigellaflexneri4cMNNVFLYRMPVGIAGLSLARRTPSNRWSLNPITPSLPMAWLVNTMMTVFSCRWQMVIPQTRRGSTCALIRPRRSRTWFARWEQARTSRATPSVATPLISVLILMPALSKKGDLH
complement(2176..3396)             PHAGE_Iodoba_phiPLPE_NC_011142: gp27 putative head protein; BS653_00025; phage(gi197085641)     5.77e-20            Shigellaflexneri4cMKYFFETRLGETRYRLADGSLLCKDVPIGRTGKQLYGADDLPKLKPDKFVEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKVLAVGHLQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKAEQVDITGNHVALVPKGRAGNRCAIGDRDTMANQKKNWWNRMRAAIKTGDADTMNELVESAPASVTGDEGDLPQGVNLNINLSPQQPLPDKAPEMGGDPTGDSDDDLKTLLKALLAKLERNATGDNDNKPDDNPTGDGEDDEEETTITGDSAWRAEVIVPGIDLSRKMKPTAFKREVLASADKTLVRQIVGDADIRKLPKQSVDMAFNAVSEVAKGRNTRATTGDAQRLNMGMTSIASLNKQNAEFWANRKG
complement(3400..4017)             PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; BS653_00030; phage(gi966201421)     1.43e-120           Shigellaflexneri4cMAALERYSEIITPWATKVAENFTADLTRQNEKVWRQHSKNISRELRNLVESAPVGQVMQSIIAEQVKYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEQFAKEIASTGDVAKSRADLIARTELGRATGALDMARAIAIGSDGYIWRTADDGDVRDSHDHMKGKFVRWDSPPTLDGMTGHAGELPNCRCYKEIVFVRVPFAMKRAA
complement(4034..5500)             PHAGE_Salmon_SEN34_NC_028699: putative portal protein; BS653_00035; phage(gi966201420)     0.0                 Shigellaflexneri4cMARNKQALRRTVQATADGYENFIARVGMQTPNQHSASTYRANFTSRNRMLVEWSYRSSWIIGEAVDAIPDDMTRKGIRITSEIDAKDRGILESQLDELQIWDALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRPETIGKGKFKGILPLDRWMVDPALTRRIKDMGPDLGKPEFYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVERIWDRLTAFDSATVGAAQLVYKAHLRTYSVEKLRELIALGGPAYEALLKNIDLIRQFQSNEGMTLMDSRDKFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGDADLANYYDRISSLQERRLRLPVRRILDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRSTVALNTTNAISTAMGDGLMTLKAAMTDLRENSDVTGIGASITNEDIENAEDEAPPGIGEPDDEPQEPSGGNPVSNQPTQDSEGGRRHRKWSLRWFK
complement(5500..6260)             PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; BS653_00040; phage(gi764162249)     1.67e-57            Shigellaflexneri4cMSGNIGANPAIIKLSWIEAAVDAHKTLNFEPSGRKRIGFDVADSGTDKCANVYRHGSVVFWADEWKAKEDELLKSCQRTYQAALEREADIVYDSIGVGASAGAKFSEINADRKSENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLTVSEIRLTPLTTENSILWMSSAILVVRCLKSNWNQHLIVISTVTDVWSKVKKTSQNARYRHQTLLMHSLWPSRQSIHRWISGNSWGDRPGA
complement(6245..7517)             PROPHAGE_Escher_CFT073: transposase insC; BS653_00045; phage(gi26249447)             7.79e-65            Shigellaflexneri4cVIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGMGSKLSQPLSPGVACAVARHSQTNRLDGWPPQSSHYGCASPYTPCYRRAAHVWLSSGMGAASQTGRTWYACDQCQTCLPAHAPECAVAAKTCCTAIETGTYRQSGRERKQSAMVLRVRVLLRRETACHVRAGLLSGTALGGDYRRLQQNSTGRHAGSGGMPLRQRSSVVSSGVADGWFMLPGNTPVRPDVGTTEEHGGASGERNSRELRENDKALHQYHAQTRRVNGSKEPCRGVRALRMASACAGLSLATGISAAAGLWVKQMSGNIG
complement(7548..8231)             PHAGE_Acinet_IME_AB2_NC_041857: hypothetical protein; BS653_00050; phage(gi100027)     8.25e-122           Shigellaflexneri4cMTSTLTSKPTLNPALRSFWTMRARNKVLYGGRSSSKSWDAAGIAIFLSNKYTLRFCCARQIQNKIEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGIDMLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVTDFVWRNFVVDPPEGTLIRKINYDENPFLSDTMLKVIDAARRRDPDGFKHVYEGVPESDDDAAIRLAP
complement(8182..8700)             PHAGE_Escher_P13374_NC_018846: phage terminase small subunit; BS653_00055; phage(gi410491651)     2.33e-12            Shigellaflexneri4cMYTGYETDTRNAYRSPTNPFQPGNQQALKHGGYARRLLLKDEVIEDAKALTLEDELFRLRANNLVAAENIGRWLVSLEDANGDQERKMLIENISAAEKAMMRNTVRIESIVGTLATVGKIFADTAYRKAATDKVSLEADRLRRDAGIDDGNGERDLNDFYSDIQTDAESGFT
9459..9650                         hypothetical protein; BS653_00060                                                    N/A                 Shigellaflexneri4cMQNNSVSILFTSRFIAVLRYIAPLVAGMLQLHPVKVYTVSLISAASWSALYVGSFSFVLPFFS
complement(9739..9999)             PHAGE_Entero_mEp460_NC_019716: Rz lysis protein; BS653_00065; phage(gi428782373)     2.85e-48            Shigellaflexneri4cQCATSKAENDALRRKLDNGGRVLVKGKCPVPSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQTALRMLQEYIRIQCLGG
9975..10052                        pyrimidine monooxygenase; BS653_00070                                                N/A                 Shigellaflexneri4cFQLLKWHTEFGHLNRGDMLTSEQHR
10057..11224                       PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; BS653_00075; phage(gi41057344)          2.66e-35            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITRNKLKSVSSGKSYNALKWRMKYKRLPRSCQTPTVLDNRETQSALSCGHTLPCVRGSSQQLQILEKPSKTRRQTGCITQSGTATWHQPRFGRSKKHRHNGNPERLPDGTLACWQAHERAGAGQLSAADSPVTWWSTCCYPLPKAVRRDRAKSGVVRCDLYLDGALGVPRRCSRPVRKKTSGLGHVVLAGQQAHHESAGNGMGNPWARRGDVPQRSGQSLYEQAVPAVIVAIPDQTEYEPARKLLGQPNGTLLQESEERMDAGGGLRKLQRGSSRHNGLYRWILQCTKTARIRWVTPKRIGKSILEKLLGGQFLLA
11253..12131                       PHAGE_Entero_phiP27_NC_003356: putative replication protein DnaC; BS653_00080; phage(gi18249882)     3.36e-179           Shigellaflexneri4cMMTFNLREQQKRLQARMDELRAEIAFAQKGEKPWPYRSCLMREGRGYCEKHGEYHTHILVWSDRNGEDREEISCCPDCLIAEANDLTMELSSIKAEELTDNAGIALRFRDCEFDNYLEVNPGAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHLAVAMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADEVIERYASMDLLIIDEVGVQFGSAAEMAILQEIINARYESILPTILISNLSPEELWAFISPRIADRITDGGRNWLSFNWPSYRSRIRGVAA
12128..13519                       PHAGE_Entero_phiP27_NC_003356: putative helicase; BS653_00085; phage(gi18249883)     0.0                 Shigellaflexneri4cMTTPVWRNDDLEGAVIGAFFLRGADPEVMDILATLPADVFSVRAYQDIYTGICRQARVSGVIDPVLLCNEMPELAPVITDTGRKTWVKSSLEHYVAALRRNAALRDAEKTLNEALQKLRDAHTCEAAEDALKDAQNMMVTLSTGKGVIQPVHIDDVLPEVVERVECRNQGLEKSRTLMTGIDELDAKTGGMEPGDLVFIAARPSMGKTELALDIIDKVTEQGHGVLLFTMEMANIQIGERMVSAAGGMPVSRLKSVAHFEDEDWTRFSQGVGRMTGRNIWMVDQANLAIDEICATTKHHLIKYPETALVVVDYLGLIKTRTTGRHDLAVGEISKGLKGLAKSGGFPLIALSQLSRGVESRPNKRPMNSDLKNSGEIEADADIILMLYRDEVYNPDTQARGIAEINITKQRNGSLGTIYRRFYNGHFLPVDQESARVLSTPMKPGNPRRYSNKRTDSSKMERFF
13531..13773                       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_00090; phage(gi18249884)     5.16e-48            Shigellaflexneri4cMTFTPEQLRKHAQEMLRHAEQLEKTGITKDAIRKDMVPALRELMQAKHRAQKAVDELVDCVAELETRVGKFEKLVQEALR
13868..14068                       PHAGE_Shigel_Stx_NC_029120: NinH; BS653_00095; phage(gi985761277)                    1.64e-29            Shigellaflexneri4cMSVKIQTIPELLIQTRGNMTEVSRMLNCNRATVRKYAEDKEGKGHAIVDGVLIVHRGWDRGKDSDA
14061..14441                       PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; BS653_00100; phage(gi985761278)     1.63e-79            Shigellaflexneri4cMRDIQQVLERWGAWVANNHEDVTWSSIAAGFKGLIPSKVKSRPQCCDDDAMVICGCMARLNRNNNDLHDLLVDYYVFGMTFMTLARKHGCSDGYIGKKLQKAEGVVEGMLMMLGVRLEMDKYIEHP
14641..14717                       tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTTGGTCAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCA
14719..14795                       tRNA                                                                                 N/A                 CCACCACTAGCTCATCCGGATAGAGCATCAACCTTCTAAGTTGACGGTGCGAGGTTCGAGTCCTCGGTGGTGGGCCA
14798..14873                       tRNA                                                                                 N/A                 GCCGACTTAGCTCAGCAGGCAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCA
14877..14951                       tRNA                                                                                 N/A                 GCGGGCATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCA
15244..15459                       PHAGE_Entero_VT2phi_272_NC_028656: holin; BS653_00125; phage(gi966197762)            4.87e-35            Shigellaflexneri4cMKSMDKISTGIAYGTSAGSAGYWFLQWLDQVRPSQWAAIGVLGSLLLGLLTYLTNLYFKIREDKRKAARGE
15478..16092                       PHAGE_Stx2_c_86_NC_008464: hypothetical protein; BS653_00130; phage(gi116221997)     1.77e-40            Shigellaflexneri4cMNQRFNHLENEITELNKKLSALVSSEDENKRRDEHYAAIYDYCHKVAHETFMKFLQEKFLPAALSEKEAAYLRPEYVITVNSAGEEEHKSDFIASAPDKDQEPHRPFRVSCEEGEFVVYENGKPVRASHHHCLKIINLAIRCLKDENTRVMKRIGRCMGYLQVAAEIEALASGADMDAAVREALLRDFNTPPLRKSLMTGSSRG
16158..16691                       PHAGE_Entero_mEp460_NC_019716: endolysin; BS653_00135; phage(gi428782372)            5.35e-127           Shigellaflexneri4cMSAKIKYGLSAAVLALIAAGASAPQILDQFLNEKEGNHTTAYRDGSGIWTICRGATMVDGKPVIPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDVGRDCRIRSNNCYGQVIRRDQESALACWGIDQ
16688..17092                       PHAGE_Salmon_HK620_NC_002730: endopeptidase; BS653_00140; phage(gi13559860)          7.88e-90            Shigellaflexneri4cMSRVTAIISALVICIIVCLSWAVNHYRDNAITYKEQRDKNAGELKLANATITDMQQRQRDADALDAKYTKELADAKAENDALRRKLDNGGRVLVKGKCPVPSSAETSSASGMGNDATVELSPVAGRNVLGIRDG
17154..18310                       PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_00145; phage(gi21231087)            1.25e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPLQPSGKNIIRWLLAA
18338..18661                       PHAGE_Entero_N15_NC_001901: gp1; BS653_00150; phage(gi9630465)                       2.82e-23            Shigellaflexneri4cMPVHLKLLIARWELTAEQAVAQQLKNQVSKGNLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHIDHLKILIAKGANQCARAGDKLPDLLDEYIRTTTE
18633..20560                       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; BS653_00155; phage(gi169257235)     0.0                 Shigellaflexneri4cMNISEQQLSNMMVAVTIALQPLVRVLPVTAVEWADQNYYLPKESSYGEGEWKTLQFQVAIMNCMGNDEIRTVNLIKSARVGYTKMVLGVIGYFIEHKSRNTLLFQPTDSAAEDFMKSHVEATIRDVPCLKKLSPWLGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDDATSFGLKWEKGKPETVYYLCEHNGCVIRQSELDQTGGRWICDNTGMWTCDGLTFFSASGNEIPPPRSITFHIWTAYSPFTTRVQIVCDWLDALKDPNGVKTFVNTTLGETWEEAVGEKLDHQVLMDKVVPYTATVPVRVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDAAINKKYRHADGTEMTISRVCWDIGGIDGEIVYQRSKKHGIFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPVNEATSYAIRFPDNPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVQLHPARMQLHNRPLKNWQRSCPEEMVTVAGA
20544..20747                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; BS653_00160; phage(gi169257234)     6.48e-18            Shigellaflexneri4cMVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLNELNRAINDAESVLGTTRRRRPLGVRL
20744..22337                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; BS653_00165; phage(gi169257233)     0.0                 Shigellaflexneri4cMKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNGIAANAVALHKDHIVGHMFLISYRLNWRWLGMRETTAKSFVGEVEAAWSEYAEGMFGEIDVEGKRTFTEFIREGVGVHAFNGEIFVQPVWDTETTQLFRTRFKAVSPKRVDTPGHGMGNHFLRAGVEVDRYGRAIAYHICEDDFPFSGAGRWERIPRELPTGRPAMLHIFEPVEDGQTRGANQFYSVMERMKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQGQQDNPLINILEKFTRWYDTNNVTLGGVKIPHLFSWRCAEPADSAGFRQWIFGATGAAAVYCSRSWRFLRTVVPLLEGQLLKCPRLRQVVALFYGAAKIYCGPAGHADVFLLAGRGASSGDYSSATGAFFLPGAFSLVTGRVDLRKNGHRAQGGPGIGDAHGRTEHVERTGTDGRRLSGHFPPAGQGIRRARKSRTLTSGVDSPGVSAADSGESQAGRGDNITDVA
22327..23832                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; BS653_00170; phage(gi169257232)     0.0                 Shigellaflexneri4cMRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSSGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVMGTEAAVFEGQSGIEAELADELINASDAISVMAATLNTHDTGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAVAAPQQSGVSAQSEADRIMACEEAKGREQLAATLAAMPEMTVEKARPILAASPQANAGPSLRDQIMALDEAKGAEAQAEKLAACPGMTVENARAVLAAASGRAEPVSASTTAMFEHFMANHSPAAVQGGVPQTSADGDADVKMLMAMP
23869..24216                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; BS653_00175; phage(gi169257231)     2.82e-54            Shigellaflexneri4cMVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGHVVGILVLPLEGTETVLTYYKSGTFATEAIHWPERVDTHKKANAFAGSALSHAALP
24274..25302                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; BS653_00180; phage(gi169257230)     0.0                 Shigellaflexneri4cMGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGNNITQAGGTEWSAQDRDTFDPTHDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK
25354..25740                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; BS653_00185; phage(gi169257229)     3.65e-12            Shigellaflexneri4cMATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDDPTAHKGESVPEQPGIVTGDETGQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMAAGGLAKRQ
25752..26129                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; BS653_00190; phage(gi169257228)     5.10e-34            Shigellaflexneri4cMDGFDNLFDAALAGVNEVILRDMGISAVITSGELEGTHLTGVFDDPESISFVAGGIRLEDSSPCLFVKTADISQLRRQDTLTIGDDSFFVDRITPDDGGCCYIRLRRGSPAPQNNARMRRYDEGT
26116..26700                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; BS653_00195; phage(gi169257227)     3.92e-100           Shigellaflexneri4cMKGLENAIRNLNSLDTRMVPQTSAWAVNRVAAKIVSVATRQVAQNTVAGDNQVKGIPLKTVRERVRLLKASPSGKMYARMRVNRGNLPAIKLGTAQVRLARSRHGSNSRHRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIPMSGPLTQAFEDARDRIIAAEMPKQLGYALKQQLRLHLSK
26697..27098                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; BS653_00200; phage(gi169257225)     9.60e-65            Shigellaflexneri4cMNRHTQIRQSVLARLREQCGDSATFFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATWAMAEITYQITYTN
27109..27849                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; BS653_00205; phage(gi169257224)     9.78e-106           Shigellaflexneri4cMTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKGVKQGSVSIVGMTSDGEFVAVAAVTVSAP
27908..28294                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; BS653_00210; phage(gi169257223)     3.59e-43            Shigellaflexneri4cMFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDHEALTPEKS
28303..28632                       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; BS653_00215; phage(gi169257222)     3.13e-42            Shigellaflexneri4cMQFVMRLAREFRRADWRRMLSDMSATELGEWGDYFRMQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH
28604..31645                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; BS653_00220; phage(gi169257221)     0.0                 Shigellaflexneri4cMDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQRFMERQTQAARQTMQAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQKMREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQDYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGVSSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRAGWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEKFNRQLALTGHYAGVTVGQLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDTINQFKRLKDDPVNAAKALDNALHFLNATQLEQIRVLGEQGRSSDAARIAMSALAEETGKRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYPWTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKNELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGDKQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKRYWQELEVAQGDWKNGAMRAFQNFTADADNAAGTAEQMFTVAFSSAGNALATFCTTGKLNFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIEINNDGTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR
31645..31974                       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; BS653_00225; phage(gi169257220)     8.53e-57            Shigellaflexneri4cMETFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSTYSVTIRVRKGEHPSLKAFLERHGGVRAFQWTPPYDWKLIRVVCRKWSASVGALWVTVTADFEQVVN
31974..32672                       PHAGE_Entero_lambda_NC_001416: tail component; BS653_00230; phage(gi9626261)         1.13e-156           Shigellaflexneri4cMQDIRQETLNECTRAEQSARVELWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQAYPIQGSGFELNGRGCAARPTLTVSNLHGMVTGMAEDLQSLVGGTVVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDGAVFPGRIMLANTCMWTYRSDECGYTGRAVADEFDKPTTDIRKDKCSKCMRGCELRNNTGNFGGFLSINKLSQ
32677..33420                       PHAGE_Entero_mEp460_NC_019716: tail fiber component; BS653_00235; phage(gi428782332)     2.95e-176           Shigellaflexneri4cMTQTESAILAHARRCAPAESCGFVVRTPEGDRYLPSENISGEPEERFRMAPEDWLRAQMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHREWHASAFTGICNDLAAASTFV
33318..33959                       PHAGE_Entero_cdtI_NC_009514: putative tail component; BS653_00240; phage(gi148609399)     9.62e-130           Shigellaflexneri4cMAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVAIWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
34020..37498                       PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; BS653_00245; phage(gi148609400)     0.0                 Shigellaflexneri4cMGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKSVLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITRTITSANIDRLRLTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTTSQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCLWDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNVVEVNWIDPDNGHETATELVEDTQAIVRYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHLTAEVTADSGNIRCWRDGTRRRWRVASCFAPWQRTTAVSGWSAQPGRRKPHTASGSWRWGITVQSGRMPGGSRAIRRRYRSGLRHRQRLSLLNYRGIFRRWSRNWLYMTRRCSLSSGFRKSGLRISGRLKPAPAILARRCTGPPVSISGRAMIIIFTFAVTPLANRHLWRPSVGRAMMRKVIVFIKGSIKRISARSCGRRLITVSLRRTLKSGRPLRMSAMKSRKPSIKNWKIRVLQSSRYRKFRLIQIITTACGLSCNRRTDAFILRVSVPVLRIRQQECRVRCCWRQTGLRLILRMATQSRCLLVRAIRYSTTCSNARLRPLPAAVILRHFPHLADGRRKMPISAVTTRTPGRSTTSRLIRTVGFWENCPRTRLKAISLKQWANLSHGTPGHRRGGHQGPLPSGFMTISRLIGKLLFPRWRFAVLNMSGRITIFIRHAARKTVLKFITERPWIIRYIRVLLICLPVTVTRWSFLYRHGWMAGIPQQVSAICWLLRNPQQVSVSAGA
37566..38165                       PHAGE_Entero_BP_4795_NC_004813: outer membrane protein Lom precursor; BS653_00250; phage(gi157166058)     2.02e-133           Shigellaflexneri4cMRKLYAAILSAAICLAVSGAPAWASEHRSTLSAGYLHASTNAPGSDDLNGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGLSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAWGAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF
38229..39640                       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_00255; phage(gi18249920)     6.72e-68            Shigellaflexneri4cMAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEVMKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYRYWPISRLTGKIPQKILFTESWRALSATDGETLTLAGLLLRTREKLTVIKSSDLSGGSHTEAHDWDRWGFQCPVLPPERIHPHNFSLRDVQSIHYRGHIAPCPGCRMHMSLAQCPGFLFAHRGA
39591..40214                       PHAGE_Escher_Av_05_NC_025830: tail fiber protein; BS653_00260; phage(gi730985066)     3.68e-43            Shigellaflexneri4cMHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGRTWNADASSVARLSPVVMLAKSVAAQTHMVWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSSLDDLASIRAFDVK
40214..40393                       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_00265; phage(gi849255281)     1.07e-06            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRPPGCAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(40394..42157)           PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_00270; phage(gi169257209)     3.16e-09            Shigellaflexneri4cMKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGAATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPPSLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPDLPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRLPELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSSPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(42345..42425)           PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; BS653_00275; phage(gi16130281)     2.05e-09            Shigellaflexneri4cIYNHAQYLDKRREMMLWWADYWLDEKV
complement(42646..42825)           hypothetical protein; BS653_00280                                                    N/A                 Shigellaflexneri4cMKEPAARWSGLTFISTLWQAHRLPRCLVNHSARWRNAIWYHLKVLKTTFCLFTFPFRSS
complement(42740..43216)           kinase inhibitor; BS653_00285                                                        N/A                 Shigellaflexneri4cMKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDVERIDVDEGASGAMVGFNVHFHSLASASITAMFS
complement(43275..44564)           PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; BS653_00290; phage(gi100190)     7.35e-06            Shigellaflexneri4cMTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKTQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIIESGEWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
53801..53814                       attR                                                                                 N/A                 GGGAAAATATCATC

#### region 2 ####
182654..182665                     attL                                                                                 N/A                 CCTGTGGTCGCA
190546..191220                     PHAGE_Stx2_c_1717_NC_011357: truncated transposase; BS653_01035; phage(gi209447151)     8.59e-10            Shigellaflexneri4cMNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINNNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLSDPLTPELLRALIREMKGGIR
191217..191544                     PHAGE_Stx2_c_1717_NC_011357: transposase; BS653_01040; phage(gi209447152)            1.52e-34            Shigellaflexneri4cMITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFTKRLAGDPGRESAPDASSVIHATGGDRVATSQTDRTAWHPDIA
191564..193165                     PHAGE_Stx2_c_1717_NC_011357: transposase; BS653_01045; phage(gi209447153)            0.0                 Shigellaflexneri4cMNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSPPSENPIASKPEFPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQLDIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETGRVKEAGGLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGRVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK
193200..193466                     PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; BS653_01050; phage(gi24114950)     4.50e-59            Shigellaflexneri4cMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
193451..193699                     PHAGE_Salmon_HK620_NC_002730: endopeptidase; BS653_01055; phage(gi13559860)          1.18e-41            Shigellaflexneri4cMSGNIGANPVTAIISALVICIIVCLSWAVNHYRDNAITYKEQRDKNARELKLANATITDMQQRQRAADALDAKYTTELANAK
complement(193705..194873)         PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; BS653_01060; phage(gi24373865)       5.58e-10            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSERIILWSHSAMCSGFIAAATDTGKTVLKNQTADGLYYAVRYLSYMASATVRPEQEASPQWQPGEATRWDAGLLAGSKSWGWSAVSSRLTGINVVVMNMLLSLTTLKGSSPPSQIRCGAVMPISGRVSAGRTSPLFSTCSQENQWAGPCRSRRTAGSPKRWKWHGKPVVSPAGCSTAIRAVIIRAGSSGSYCGDTRSDRVAGAETAGITAQWNASSGVRTNGCRWWVTASARQLTPRTISLDITVHDRTNITVGYPQTNRKIDTGKTLTRWPVFVGA
complement(195156..195368)         PHAGE_Entero_933W_NC_000924: protein MokW; BS653_01065; phage(gi9632542)             3.20e-41            Shigellaflexneri4cMLCTCRLASYMPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESRK
complement(195539..196204)         hypothetical protein; BS653_01070                                                    N/A                 Shigellaflexneri4cMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASEIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
complement(196373..196729)         PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; BS653_01075; phage(gi100050)     6.35e-12            Shigellaflexneri4cMEIKPEDELSNIVLFPIKEDDPRNQVNFLYKPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRLLRQEEQERRRNIEKLIQIERNAKARIRRATKSRTE
complement(196787..197209)         PHAGE_Shigel_Stx_NC_029120: LygF; BS653_01080; phage(gi985761265)                    5.57e-67            Shigellaflexneri4cMAKPFTPEQREELKTRIVELVHQDGRVTIRQLSDETGISRASVGRLCIELVASGDVYNSGYGLFPSEQARKDWQSARKKLSRVKVRKPVVVDPDLIWSLPDGEIRRYDRRLNIICRECRKSEAMQRVLAFYQGNFQEAIL
complement(197224..197970)         PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; BS653_01085; phage(gi169257254)     7.88e-99            Shigellaflexneri4cMKNIATGGVLERIRRLTPQHVTAPFRTVAEWREWQLAEGQKRSEEINRLNRQLRVEKILNRSGIQPLHRKCSFANYQVQNDGQRYALSQAKSIADELMTGCTNFAFSGKPDTGNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEVMKTLLGERVMDRMVMNGGRWVNFNWESWRPNVSHSRVVK
complement(197977..198754)         PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; BS653_01090; phage(gi418487646)     6.76e-53            Shigellaflexneri4cMASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVTKSAIDRITFMSGFADALIQVGWLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELKRKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRASKKFEPEAIELPDWLPETLWHEWVRFRQALRKPIRTEQGDTGTGKIPSAGFYTAGDSTQHRQIPGPVRAERCSADVAPTGHRLVAGQCDPARLQGVA
complement(198832..199254)         PHAGE_Entero_mEp237_NC_019704: CII protein; BS653_01095; phage(gi435439306)          2.79e-09            Shigellaflexneri4cMKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELSLVPGKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLRIFDTLERRALLAAQEALSTAIDAHDDAVQAVYRKAHFSGGGSPGDSVVVH
complement(199238..199465)         PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; BS653_01100; phage(gi422936651)     9.89e-13            Shigellaflexneri4cMLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQEASGGELQYDPKVYDEYRKAKRPGKVIHENQA
199542..199949                     PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; BS653_01105; phage(gi401817574)     5.09e-39            Shigellaflexneri4cMKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQPAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPESEQKALLSEMRARVENFNKLFEELLKARKRSANK
200152..200307                     PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; BS653_01110; phage(gi472340166)     2.82e-11            Shigellaflexneri4cMNTIDLGNNESPVYGVFPNQDGTFTAITYTKSKTFKTEAGARRWLGRHSGE
200309..200512                     PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; BS653_01115; phage(gi401817573)     1.67e-16            Shigellaflexneri4cMNETELKHVIALLLEDAKRLQQLEPNAGTGARIWLAKEALESGDYDSEEAFYKAEGRAGYSPGLGGV
complement(200489..200779)         hypothetical protein; BS653_01120                                                    N/A                 Shigellaflexneri4cMITDVWKYRGKSTEPEDYEGLHKYMLSLGFRRTIPHGDGSYNQLPDGTYVSEKGGDIYQIRSQISDYADRLSGYRASVFVCEFSQCAWYLYPAKTR
complement(200754..202027)         PROPHAGE_Escher_CFT073: transposase insC; BS653_01125; phage(gi26249447)             1.24e-64            Shigellaflexneri4cVIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRHCTGRLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCGVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAG
complement(202146..202397)         hypothetical protein; BS653_01130                                                    N/A                 Shigellaflexneri4cMPRAHSRIHRITKFTLKRADISQQLNRCRQLVLHTAMSLFTTGSALPPFKFHRQDRLFMDTGNAPSCCARFYFTTSGLWWYLY
202530..203378                     PHAGE_Entero_mEp460_NC_019716: regulatory protein Rha; BS653_01135; phage(gi428782357)     3.97e-68            Shigellaflexneri4cMLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQPQGWPVSVVTGCSNPVRLTTHEIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTTSVAVAEFFRKMHKNVIQKIETLECSPEFNRLNFKPVTYTDAKGEKRPMYQITKNGFVFLVMGFTGKKAAAFKEAYIAEFDRMEAELRQNNTPPADKMIPGDGRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLLSLK
203395..203676                     PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; BS653_01140; phage(gi169257260)     2.64e-07            Shigellaflexneri4cMNPMLDYCFTSAPQQTITHTGIKNLLWIIKKNLQKGDPDLIPCAYGLCDRQVSPDKAYTAELIYMHGTMMRKKKRKYCSEICAEKDQMAHEL
203892..205021                     PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_01145; phage(gi21231087)            3.44e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKSTAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGSWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRLLAA
complement(205046..205690)         PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; BS653_01150; phage(gi169257262)     1.27e-49            Shigellaflexneri4cMSTKPLFLLRKAKKSSGEPDVVLWASDDFESTSTTLDYLLVKSGKKLSNYFKAVATNFPVVNDLPPEGEIDFTWSERYQLSKDSMTWELKPGAAPDDVHHQDNAQETKELAGGQEENAQADAHEDCQDCEVSVATLRFTQRLLHIFTYAAGDLKYLHHATREQRKHITALEMDQENSYVQNLLLAIRGMAEPTTLDNAALLRLTDAIKAEVYWQ
complement(205790..206022)         racC domain protein; BS653_01155                                                     N/A                 Shigellaflexneri4cMVVSAIASTPHIGYVIKTENKETPFTVVDIDGLSGNFKTLVEGATKMCLVYIGNNLPAEKKPNFWQILQNKVKSGA
complement(206034..207190)         PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_01160; phage(gi21231087)            1.72e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
207256..207873                     PHAGE_Escher_Av_05_NC_025830: tail fiber protein; BS653_01165; phage(gi730985066)     1.15e-43            Shigellaflexneri4cMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQRIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGRIWNAGPNSLGRLYPVVMAAKSDIVRDVMTWGDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
207873..208052                     PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_01170; phage(gi849255281)     7.57e-08            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRPPGRAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(208053..208919)         invasion protein; BS653_01175                                                        N/A                 Shigellaflexneri4cMAAWFPEADRREVSTQWTSFSTEENSRAFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSDDADAEREAGAQVMRETEQQIYRQLTDEVLALRLSENGSQLHHS
complement(209251..209878)         PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_01180; phage(gi169257209)     2.67e-05            Shigellaflexneri4cMREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQRTEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKELIARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLKKLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLA
210369..210500                     PHAGE_Entero_P88_NC_026014: DNA invertase; BS653_01185; phage(gi744692743)           3.20e-12            Shigellaflexneri4cMLIGYVRVSTNDQNTDLQRNAFICAGSELIVARMGSWPEVVMA
210760..211755                     6-phosphogluconolactonase; BS653_01190                                               N/A                 Shigellaflexneri4cMKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESVLPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDYSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
complement(211796..212749)         PHAGE_Burkho_phi1026b_NC_005284: gp58; BS653_01195; phage(gi38707948)                1.36e-08            Shigellaflexneri4cMKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFSLLINLWTDDKDNLWTNIVERQRHALQEIS
212933..213985                     isomerase; BS653_01200                                                               N/A                 Shigellaflexneri4cMKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
214061..215494                     anion permease; BS653_01205                                                          N/A                 Shigellaflexneri4cMNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKLIAYLLIGKIGNTMLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
215677..217857                     hydratase; BS653_01210                                                               N/A                 Shigellaflexneri4cMIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
complement(217998..219281)         acyl-CoA thioesterase; BS653_01215                                                   N/A                 Shigellaflexneri4cMNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEALNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNASGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEEKK
complement(219416..220186)         PHAGE_Entero_HK106_NC_019768: integrase; BS653_01220; phage(gi428783305)             0.0                 Shigellaflexneri4cMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
229154..229165                     attR                                                                                 N/A                 CCTGTGGTCGCA

#### region 3 ####
414755..414766                     attL                                                                                 N/A                 TGGTAGTGTCCG
426876..427838                     PHAGE_Escher_HY02_NC_028872: putative tail length tape-measure protein; BS653_02380; phage(gi971750937)     1.06e-52            Shigellaflexneri4cMTLPVFITVIADHDKPQPSGCLLDNLSSAAVKTAGVLISFQAVLSAYQRVMEVGLQRASAERSIDFVFSKDANQVKDFTKSLAQTTGLDIAELQSQFAGFGASARESLGIQGSEELFRNMIGYSRLMGRSEEEIKRALTALSQMAGKGQIMAEELKGQLAEAVPGMVQVFAKATGKTEQELFDAMKKGALKSADTLQKVTQELNKQITAKGGWKAISESTQAQLGNLKNSWNTTLDSIFRGSENGLQDFTRSLTNLLNALGGSGKSLGESLGSLMTSMSHGVDSLTDISYRVRAFFDEVTLAYRPLNDTQRKIVDGEVAH
427813..427914                     transposase; BS653_02385                                                             N/A                 Shigellaflexneri4cLLMVKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
427895..429062                     PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; BS653_02390; phage(gi41057344)          3.46e-34            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPLPRNKLKSVSSGKSYNALKWRMKYKRLPRSCQTPTVLDNRETQSALSCGHTLPCVRGSSQQLQILEKPSKTRRQTGCITQSGTATWHQPRFGRSKKHRHNGNPERLPDGTLACWQAHERAGAGQLSAADSPVTWWSTCCYPLPKAVRRDRTKSGVVRCDLYLDGALGVPRRCSRPVRKKTSGLGHVVLAGQQAHHESAGNGMGNPWARRGDVPQRSGQSLYEQAVPAVIVAIPDQTEYEPARKLLGQPNGTLLQESEERMDAGGGLRKLQRGSSRHNGLYRWILQCTKTARIRWVTPKRIGKSILEKLLGGQFLLA
complement(429068..429502)         PHAGE_Staphy_SA1_NC_027991: phage conserved protein; BS653_02395; phage(gi937456837)     1.59e-68            Shigellaflexneri4cMENFIDTLENWRDQKQIISVICKDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDVSAATGRTSTTNDGGATSKKNTGNTTTSLGSPMLTCKELFSYSASELSDEALKARVTCSKSVSVKNGESTFTASANE
complement(429499..429678)         hypothetical protein; BS653_02400                                                    N/A                 Shigellaflexneri4cVVRRLRFSGPKTSIICSPMTSLKTSIKTITISDTGCLEIQGASLVNPVVPLSHEIISWW
429590..430863                     PROPHAGE_Escher_CFT073: transposase insC; BS653_02405; phage(gi26249447)             1.09e-64            Shigellaflexneri4cVIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRHCTGRLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCGVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAG
complement(430875..431099)         PHAGE_Salmon_BPS17W1_NC_042097: hypothetical protein; BS653_02410; phage(gi100089)     1.88e-34            Shigellaflexneri4cMIYSNQLRYTGKDGVYFHLQGQPDNFLSLSATENMEFDSPMMVTTQNMQSGQTVTDNVMRSPRTISISGVVVVGE
431259..432468                     PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfA protein of IS629; BS653_02415; phage(gi157166066)     6.85e-70            Shigellaflexneri4cMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKKCHCWISCVSSTGSDRYAANCILPRQRITTVSNSDIIRINAVPVRSAMTGRRKRYSAYTMKITRYTVSLASVVTGRYQSGQMHCGTSHGGYGTCRCSPGKGPYDHQPESRCRRRPRKPSVRGRTTTAVGGFYLRQHMAGLRLCGVHHCVCRIHRGVAGLIVHGNDIRAGCTGAGVMGPSTVRHGPSQRFSVCIAGLHTAAGSRITGINRKYRRLVQRDGGEHQWSLQSGGNTPELEKPCRSGTGHTHVGGLVQSTIAGKAGPHPSGRSRKSLLCFHRKRSGSLA
432756..433912                     PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_02420; phage(gi21231087)            1.72e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
433925..433936                     attR                                                                                 N/A                 TGGTAGTGTCCG
complement(433937..434869)         PHAGE_Bacill_WBeta_NC_007734: putative site-specific recombinase; BS653_02425; phage(gi85701406)     1.19e-11            Shigellaflexneri4cMRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLKGGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEHYTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKKELISEGIKVSRRCPAWLRLNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTAVKKLLRNRAVIGCFTPAGREEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSNPLSVNLFRGIIKCEVYWQ

#### region 4 ####
506665..506685                     attL                                                                                 N/A                 CGGTGTAGTTAATGGTGTAGT
506712..507941                     PHAGE_Salmon_vB_SosS_Oslo_NC_018279: integrase; BS653_02810; phage(gi399528791)      9.04e-69            Shigellaflexneri4cMSRALNKLSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKLGNYPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEALKPVTVGDALTYWLESYAKENRVDYAALKKRLNNHVIQHIGAMPLDKCELRHWLACFDQVAKRTPVTAGFLLQTCKQALKFCRRRRYAISNVLDDMSVADVGKKPDISERVLSTKELGELLQALDKKIFSPYYIALIRLLIVFGCRTVELRLSEISEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEVKQETSVSQYGRLAHRRLNHPHWSLHDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNALDMWTERLGILAGTHENVTTLPVARRK
508316..508504                     PHAGE_Entero_P4_NC_001609: transcriptional regulator; BS653_02815; phage(gi9627517)     1.36e-10            Shigellaflexneri4cMLSTDRFIREKECEKLTGLSRSCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSCKAVH
508562..509011                     hypothetical protein; BS653_02820                                                    N/A                 Shigellaflexneri4cMKIEYTPERGRGFVRPGETGKPQNWGFSGIKKAAPKWSRLSEQITRCAVCVCDPKHKHGDDSRYQAGGQCNQSGSVRCHNCEVLSFDEYSLRYFSRAKEHGANRSDSCSFFLRRLFRAGDVFSVDSSLVIVCACKAMRRSTSHHGADSFY
complement(509008..509187)         hypothetical protein; BS653_02825                                                    N/A                 Shigellaflexneri4cMSTHKNERRGNPPFQFRLDPDLREKMEKAQQQDGDDSLAAWIKRIIRKELQQRGIEPKG
509317..509517                     host cell division inhibitor Icd-like protein; BS653_02830                           N/A                 Shigellaflexneri4cMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARSRCPSGCVAVFAARIRQGETYAQ
509507..509748                     hypothetical protein; BS653_02835                                                    N/A                 Shigellaflexneri4cMHNKTTPNAAAAALTTLMHALIDIECTAELAQGEEQKDRTQFALECIRYIATRSLNDAKNILVADCENGGGYASFFPGA
509721..509941                     hypothetical protein; BS653_02840                                                    N/A                 Shigellaflexneri4cMRDDRFNSLKQEFSGVPDDAADALSSMPELIRAAFFLLSTREYKSTGLMYISPPIMLISQRLFEKRRTGIAA
509943..510176                     hypothetical protein; BS653_02845                                                    N/A                 Shigellaflexneri4cMRDIYHETIDRAFLALSHSENMLEILRIWLETLGDNERDKQKSRIATALITLLEPVIMELQEIDLLHDRYKEQHTGE
510182..510481                     hypothetical protein; BS653_02850                                                    N/A                 Shigellaflexneri4cMKLKYSGLTASGNTHPKFTRGDIYRDQYGGMVTIKGVAERRITYRREGYEYDCVMPVYQFRRDFTLVQAAPRSKPTSREKARANIQEIKKMLNVFRGKK
510478..512226                     PHAGE_Entero_P4_NC_001609: DNA primase; BS653_02855; phage(gi9627512)                3.72e-103           Shigellaflexneri4cMKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAGELDLVETKKIGQKLAAADIQDANFYPEGMHVQKCENWRRYLNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAERFDGVCVHQESEIVHVWRGGVWCPVSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGALDLKTGEFSPHTPENWITTHNGIEYTPPAPGENIRDNALNFHKWLEHAAGKDQRKMMRICAALYMIMANRYDWQMFIEATGDGGSGKSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRAVVLATNNNPMIFTERAGGVARRRVIFRFDNIVSEAEKDRELPEKIAAEIPVIIRRLLANFTDSEKARALLLEQRDGDEALAIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVNDFGKAMKPAAKVYGHEYITRKVKGVTQTNAITTDECDAFL
512515..512793                     hypothetical protein; BS653_02860                                                    N/A                 Shigellaflexneri4cMHTSGKFNKSFKKRRDRTEPKYRALDMTEHALKVAIRTIDRHAGEGYAKAHPELISAFMTTTAANFATLTEREIAEAEQVTTINVKTGEVES
512790..513095                     hypothetical protein; BS653_02865                                                    N/A                 Shigellaflexneri4cMSEPKFGEKFYKHNGRITILQISAATPGWWVETDEGSSPVASWELCVLSYPDRDVYQDILPVISTDKGMKPVDIKNMGFQCVMLTEKMMEEMKKNNAGSLH
513570..514397                     PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; BS653_02870; phage(gi23505451)     3.22e-33            Shigellaflexneri4cMQRIIELRQQKTAIKNQMRDMLENAEKENRSLNDAEGAKFDELRAKAESLDKDISRLEAIADEERSKPGKSSQTTDPAELRNYILTGETRALSTGVPADGGYTVIPELNTEIMRMLADESTMRRICTVKKISSNEFKQLVSAGGATVNHGEEGKAREQTSTPQINEVSIKLYPVYAYPRTTQEIVDFSDVDILSWLTGEIGDTFTETEESDLVVGDGDKKAKGFLSVPRAEKNDKERDFGTLQVIKPSESLAWTSADPLIDLKFALRKKYRKNAV
514398..514727                     PHAGE_Shigel_SfIV_NC_022749: major head protein; BS653_02875; phage(gi557307531)     6.55e-14            Shigellaflexneri4cMVNSTTAAKLQKVKNANGDYIWRDRLQAGDPDTLLGLPVEYLEFMPDNVIALGDFKRGYYIVDHETGVRTRPDNLTEPGFIKIFTQKYLGGGVVDSNAIKILALPEDDD
514767..515339                     PHAGE_Entero_IME_EF4_NC_023551: prohead protease; BS653_02880; phage(gi589893040)     5.33e-36            Shigellaflexneri4cMGEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGNDVRGLYEHDHSMLLGRTRSGTLKLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGVELARRSLYEQHPEKMPRADNRRWWADLAGV
515341..516552                     PHAGE_Shigel_SfIV_NC_022749: portal protein; BS653_02885; phage(gi557307529)         2.45e-47            Shigellaflexneri4cMWPFRRKKEQRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISDAVATMPCYLYLVRNEKGKEAREWLDSHPVDHILNERPNAWQTPYQFKRMMIRYCLLSGNAYAVIQWGRDGFPAALHPYPPQSVNVEQTGDHNWRYCITDAYTGNIRNYLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARNAGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQIKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERGIKSDVMCPNEAREREGLSPRDGGDEFSQAWKQEVKISEGEKPE
516549..516887                     PHAGE_Entero_HK97_NC_002167: putative head-tail adaptor; BS653_02890; phage(gi9634168)     1.49e-34            Shigellaflexneri4cMNIGRLRDRITIQTLKQTRDITGEILETWEDGHTLWASVNMVSSKEAISSGAELAIGTVRIWIRYRKDINATSRIKVSTGPLAGRVLNIIGQPLPDAARTRLEILCREGAEK
516884..517180                     PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; BS653_02895; phage(gi526244642)     9.40e-10            Shigellaflexneri4cMTEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCMMFIAHLYENRQIVADNAKTRVPMTIGALWTAYRDVGGY
517180..517620                     PHAGE_Bacill_phi105_NC_004167: hypothetical protein; BS653_02900; phage(gi22855043)     2.56e-25            Shigellaflexneri4cMPWQPLRRCTEPGCNRRVKSGKCEEHRRAAWRAEDARRGHRRARGYSRQWDKYRAMYLSKNPLCVRCLEKGIYTPAVVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE
517613..517786                     hypothetical protein; BS653_02905                                                    N/A                 Shigellaflexneri4cMNEREQNRLIRGLIRQRDAWKTQETGHKDKASGRAERITAKRLTDRDREVMECFRNR
517842..518168                     PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; BS653_02910; phage(gi593779760)     5.39e-15            Shigellaflexneri4cMDDIAVKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLGFDPISRRKNPPETEEEDELDRLE
518152..519813                     PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; BS653_02915; phage(gi100002)     3.57e-100           Shigellaflexneri4cMTAWNKYAEDVKTGKIPACKRLKQAVKRYFSDLKSPLYTFDREVVERFIAFSRVCPHVKGPMRGRPIELEPWQQFAFACILGFKVKATGRRKYTSAFIEVPRKNAKSTTAAILANWFLIMENGQQDIYTAAVSRDQARIVFDNARQMCLLSRPLRRRVNIQAHKVIHPKSNSLLKPLAAKAATIEGTNPSLSIVDEYHLHPDNGVYSALELGMGARPEGLLFAITTSGSNVVSACKQHYDYCCQILDGEEVNDSIFVLIYELDDENEVDDPAMWIKANPNIDVSVDREKLASTIQKARGIPSQWVEMMTKRFNIWCQGTTPWMGNGAWAECAGTFTEEDLHGQECYAGLDLSSTSDISSVCYAFPVGKTIMLISRHYLPEFQLQNPANKNRAVYRQWAKAGWIRTTPGDCIDYDRIRDDIMQDAEKFNIRLVGFDTWNATHLRTQLQGAGFEVEPFPQTYLRFSPAAKSFEVFVNRRVIVHRGDPVLSWSMSNVVMQSDANANIKPNKKKSPNKIDPSVAALMAFGTFQAEHEDFAFDISDSHRQKLEEFSGV
519827..520108                     hypothetical protein; BS653_02920                                                    N/A                 Shigellaflexneri4cMTEAEILRLIRRVSGISQQADEQTTQPDSVTAENYARVVAEVMRRDGIQLNDADMRDIRIRVLEMLAYNRRVELYREKEKITYHWKKPERLRR
520804..520824                     attR                                                                                 N/A                 CGGTGTAGTTAATGGTGTAGT
complement(520905..522365)         Virulence sensor protein PhoQ; BS653_02925                                           N/A                 Shigellaflexneri4cMKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAQWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE

#### region 5 ####
715456..716652                     PROPHAGE_Escher_CFT073: transposase; BS653_03980; phage(gi26248352)                  0.0                 Shigellaflexneri4cMTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIAALHAGEAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPALERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTFYTPQGS
complement(716666..717028)         dienelactone hydrolase; BS653_03985                                                  N/A                 Shigellaflexneri4cMKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCKEQTSGNIYGKALAEKGYVVLAYDASFQGESGGPRWIEDPTQRVEDISRVIDYAVTLPYVDAERIGVLGVCGGCPY
complement(717028..717948)         hypothetical protein; BS653_03990                                                    N/A                 Shigellaflexneri4cMMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYPAIVVSHPGGGVKEQTAGTYAEKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDVSAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSIDALPHIEAGSNARTSDISSEEYAIMPLAPMKEADAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL
718086..718568                     PHAGE_Burkho_phi1026b_NC_005284: gp58; BS653_03995; phage(gi38707948)                2.09e-08            Shigellaflexneri4cMKREEIADLMAFVVVAEERSFTRAAARLSMVQSALSQIVRRIEERLGLRLLTRTTRSVVPTEAGEHLLSVLGPILHDIDSALTSLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVLRCTGNSGYYHLFFF
complement(718565..719721)         PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_04000; phage(gi21231087)            1.20e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNRRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
719825..720235                     PHAGE_Azospi_Cd_NC_010355: hypothetical protein; BS653_04005; phage(gi168495118)     4.71e-11            Shigellaflexneri4cMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWVDVEPSLREFFCDNGDEWMHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVGVVFEHD
complement(720249..721522)         PROPHAGE_Escher_CFT073: transposase insC; BS653_04010; phage(gi26249447)             1.11e-64            Shigellaflexneri4cVIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLIIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRHCTGRLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCGVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAA
721680..722309                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; BS653_04015; phage(gi169257279)     1.65e-24            Shigellaflexneri4cMLEGRLSGGTAAEFCNSAVVALQAAGLDVCREYPVPERGDGCGGRIDIVVTDRNGVRCGIELDRNSPRQKSLLKIGAVETGICVLRRSDIARHTEQGILVIGGAVRQKKFDPLSVDLPDWLSETLWHEWVQFRQALRKPIRTELGANGAIRELEKFRQQGFTPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG
722316..723062                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; BS653_04020; phage(gi169257280)     2.09e-101           Shigellaflexneri4cMKNIATGGVLERIRRLTPPHVTAPFRTVAEWREWQLAEGQKRCEEINRLNRQLRVEKILNRSGIQPLHRKCSFANYRAQNDGQRHALSQAKSIADELMTGCTNFVFSGKPGTGKNHLAAAIGNRLMAKGRSVIIVTVSDVMSVLHESYDNGKSGEKFLQELCGVDLLVLDEIGMQRDTKNEQVVLNQIVDRRTASLRGVGMLTNINHAAMNTLLGERVMDRMVMNGGRWVNFNWESWRPNVSHSRVVK
723077..723499                     PHAGE_Shigel_Stx_NC_029120: LygF; BS653_04025; phage(gi985761265)                    1.15e-65            Shigellaflexneri4cMAKPFTPEQREELKTRIVELVHQDGRVTIRQLSDETGISRASVGRLCIELVASGDVYNSGYGLFPSEQARKDWQSARKKLSRVKVRKPVVVDPDLIWSLPDREIRRYDRRLNIICRECRKSEAMQRVLAFYQGNFQEAIL
723557..723913                     PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; BS653_04030; phage(gi100050)     6.35e-12            Shigellaflexneri4cMEIKPEDELSNIVLFPIKEDDPRNQVNFLYKPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRLLRQEEQERRRNIEKLIQIERNAKARIRRATKSRTE
724006..724224                     PHAGE_Escher_PA28_NC_041935: hypothetical protein; BS653_04035; phage(gi100012)      1.12e-39            Shigellaflexneri4cMVTLFRKKYPRKSRTTEFLFLILFIVLMTPISPQIFVWIIGKIIEPVIELYNDVVWASFNTLHNKINPYKES
724226..724591                     PHAGE_Entero_HK225_NC_019717: HNH endonuclease; BS653_04040; phage(gi428782431)      3.06e-43            Shigellaflexneri4cMALTKKQRAELRMKFGGRCAYCGCELGEKWHADHVKPVIRFDGNMLHQERDDISNMVPECHPCNLHKHCSSLEDYRRIISDGRREFLASGKGKALVRMGLVEMKSDPVVFWFEIYQEGATA
724588..725253                     PHAGE_Escher_Av_05_NC_025830: hypothetical protein; BS653_04045; phage(gi730985112)     1.59e-44            Shigellaflexneri4cMTTITKERLQWLANISGRDDIDDIDGGEIRELALIALASLEAEPVAECIVEDGGMCIDGFGEYVGHSLPDGMHELYAAPRMRQPDGWKAVAVAWKVTFTQVDQESNTFTAIYFYKAEVERWVRLHKACDFRADITPLYAAPAVPVAVNDDMAYAFHHALSDSSLGSDEIEEIKTGLRAAFANVTIQPEPIVPDEIGPNDSNTFDYVDGWNACRAAMLKGDK
725343..725618                     PHAGE_Stx2_c_86_NC_008464: hypothetical protein; BS653_04050; phage(gi116222036)     8.82e-19            Shigellaflexneri4cMVEIVEMAMRKAGNSPVTLAGWISCSDAVPAEYCDVILLDDLGNVFPGSWDKVFCPTRGGNKMAFVDKDGVEVESSTHWMPLPEPPQEVNQ
complement(725897..725971)         PHAGE_Entero_Min27_NC_010237: hypothetical protein; BS653_04055; phage(gi170783688)     7.17e-07            Shigellaflexneri4cMLTGAFLCLPYSGMPEADSLKHPQQ
725991..726003                     attL                                                                                 N/A                 TTAACATTAATCT
726016..726228                     PHAGE_Entero_933W_NC_000924: protein MokW; BS653_04060; phage(gi9632542)             2.22e-38            Shigellaflexneri4cMSHKCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
726579..726716                     bacteriocin; BS653_04065                                                             N/A                 Shigellaflexneri4cMDYFPETPKSIMYRNGRKAIFLPMRVSDIMGNDKLLDELRVRASC
complement(726734..727431)         PHAGE_Entero_P1_NC_005856: InsA; BS653_04070; phage(gi46401643)                      6.64e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWDGSHCRSQNRWSCMTRSSGIITNTISAA
727351..727662                     transposase; BS653_04075                                                             N/A                 Shigellaflexneri4cMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPVSIGINSGILHNGLNTHSTAPAENYDGAYTTGQTNLFRITSPGDAGELRFFASNQNR
727565..728164                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; BS653_04080; phage(gi169257286)     3.56e-69            Shigellaflexneri4cMAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPVGGAITPRERKLVSGFVDYLCESVGREHTPALSDAAEQYLNTVATCRTRDTALLKSFDAFREWVTIQAGFYTEHIYPDGSRGRRAKSIAFANMDETEFQQVYKSVLNVLWNWILFRKFSSPEEVENVAAQLLEFA
728164..728454                     PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; BS653_04085; phage(gi327198620)     1.20e-41            Shigellaflexneri4cMVDLRKAARGQMCTVRIPGYCNHNPETSVLAHYRLAGTCGTATKPHDMQAAIACSSCHDLIDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKEGYL
728451..729005                     hypothetical protein; BS653_04090                                                    N/A                 Shigellaflexneri4cMIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGNMFNQLLASKKLTKTAVNEALRRMKKAGIEKPELEAFLREMINGKQKTWLAHCTDAEALCIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPEWCFRTCCSRVDVWLNLAEYMLYLPMRDAFSSGDLKTVC
729146..729331                     PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; BS653_04095; phage(gi100057)     3.31e-07            Shigellaflexneri4cMAGCVGEPKGSPVSVPGYANPAQFATSSIGVVGGDNFQMYGVIVMTTQISVETLSPITHNQ
729393..730532                     PROPHAGE_Escher_CFT073: transposase insF; BS653_04100; phage(gi26249410)             0.0                 Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILNCTGVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSCKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
730438..731085                     PHAGE_Entero_VT2_Sakai_NC_000902: similar to antirepressor of bacteriophage P22; BS653_04105; phage(gi9633431)     3.73e-62            Shigellaflexneri4cMRFSTIVSVVTLVWGISPRQPSGKNIIRWLLKKRTNGSVRYCQYTSQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGNDLKELRVALNYSQNPVSPKARSLILWTERGAARHGKMLETDQAWDVFEKLEDCYFSQRDPSTPVSCQKSYDTRVLCYQRGGVTVSTIQLRDDDIVISLESWLELARANGWFVVRRDKLVERLMQL
complement(731005..731193)         hypothetical protein; BS653_04110                                                    N/A                 Shigellaflexneri4cIKRVLSSVHVCYSPRDTALRSLPLKQFMCKNARTFLKLHQPFHQFISANNKPTIGSRQFQP
731294..731370                     tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTTGGTCAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCA
731372..731448                     tRNA                                                                                 N/A                 CCACCACTAGCTCATCCGGATAGAGCATCAACCTTCTAAGTTGACGGTGCGAGGTTCGAGTCCTCGGTGGTGGGCCA
731451..731526                     tRNA                                                                                 N/A                 GCCGACTTAGCTCAGCAGGCAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCA
731530..731604                     tRNA                                                                                 N/A                 GCGGGCATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCA
731719..733323                     PROPHAGE_Escher_Sakai: putative integrase; BS653_04135; phage(gi15834496)            8.97e-22            Shigellaflexneri4cMIQLSSSHKLPAVYYLYQRNGVYYFRLRVRQSNNDRMTSISLRTKDRRTAMAYSRHIKAALKAIHADRPNATYEEMREHLKDIAECELSMGRSDLFEPDMRDIYRDQYGELGESLTDALASEPLSIDQHRYINEALKVLKACMRRIEAGDSQPLIDYVDLFNDIDRQDNQADSVSLSVNAPEVKPEVTPSITIASLFEQYEAENYQNWKPATLRENKASHAALIEIFDHLGLNADANRADMLRVRDVLQQLPRNRKQRFKDVPLADLLSREDKTDCLDVVTINNKYLIKMAAVFRWAVRNDLIKKNMTEGLELKVPQRKASGARNAFSTEQVGQLLVAAKAYSQKTSGKPYHYYVTALAAITGARLNEIAQLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRCVPLVDGAYGFILADFMALVETRRGADGDDAMVFDGLRLMKNGYGEQVSKWFNRTLLPKVLVDRSGLAFHSFRHTVAAQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMADVYKET
734066..734164                     pyrimidine monooxygenase; BS653_04140                                                N/A                 Shigellaflexneri4cLLLKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
734145..735313                     PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; BS653_04145; phage(gi24373865)       5.07e-10            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSERIILWSHSAMCSGFIAAATDTGKTVLKNQTADGLYYAVRYLSYMASATVRPEQEASPQWQPGEATRWDAGLLAGSKSWGWSAVSSRLTGINVVVMNMLLSLTTLKGSSPPNQIRCGAVMPISGRVSAGRTSPLFSTCSQENQWAGPCRSRRTAGSPKRWKWHGKPVVSPAGCSTAIRAVIIRAGSSGSYCGDTRSDRVAGAETAGITAQWNASSGVRTNGCRWWVTASARQLTPRTISLDITVHDRTNITVGYPQTNRKIDTGKTLTRWPVFVGA
735691..735873                     PHAGE_Escher_C119_NC_042046: hypothetical protein; BS653_04150; phage(gi100023)      1.76e-09            Shigellaflexneri4cMSQQPQQPQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRKMLEELNAGNAANLLI
735902..736599                     PHAGE_Entero_P1_NC_005856: InsA; BS653_04155; phage(gi46401643)                      7.01e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWYGSHCRSQNRWSCMTRSSGIITNTISAA
736609..737520                     PROPHAGE_Escher_CFT073: transposase insF; BS653_04160; phage(gi26249410)             0.0                 Shigellaflexneri4cITKKSNSVFCTGVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA
737548..737916                     PHAGE_Entero_SfMu_NC_027382: tail fiber protein; BS653_04165; phage(gi849255282)     5.52e-24            Shigellaflexneri4cMPVHLSNPSRPVVAELGDDSGWHFFSQRNPDNSIVFTVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFCAPSGHGLSGMAISDTGRNSADNVDGVYYRPLQKLINGT
737940..738092                     PHAGE_Escher_pro147_NC_028896: tail fibers protein; BS653_04170; phage(gi971753728)     1.13e-19            Shigellaflexneri4cMLHLKNITTGNPKTAEQYQMTKRYSVTWLFSEDGKNWYEELKNFARTQLK
738113..738484                     PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; BS653_04175; phage(gi18249919)     4.34e-69            Shigellaflexneri4cMVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKSSYNAIEWPASPEGSS
738508..739776                     PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_04180; phage(gi18249920)     7.68e-109           Shigellaflexneri4cMSVVISGALTDGAGIPMSGYHIILKSRVNPPEVVMNTVADVMTGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAAGYARAAEQAKNDIDAALTGTLKTANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYRYWPISRLTDWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
739727..740350                     PHAGE_Escher_Av_05_NC_025830: tail fiber protein; BS653_04185; phage(gi730985066)     8.04e-41            Shigellaflexneri4cMLMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKLFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQRELKEELNSLKDLNSVRNFIVE
740362..740375                     attL                                                                                 N/A                 GCACGTCGTATGCA
complement(740551..741408)         iron ABC transporter permease; BS653_04190                                           N/A                 Shigellaflexneri4cMMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMGDAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFSFDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRFHIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNAHTQDLLSPN
complement(741405..742262)         hypothetical protein; BS653_04195                                                    N/A                 Shigellaflexneri4cMNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFFDENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRRAHKALEDRS
complement(742259..743086)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; BS653_04200; phage(gi371496158)      9.85e-14            Shigellaflexneri4cMMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGSGKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQGDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGTVLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR
complement(743086..744000)         metal ABC transporter substrate-binding protein; BS653_04205                         N/A                 Shigellaflexneri4cMHSIKKVTMLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAGKREK
complement(744432..745085)         PHAGE_Escher_phi191_NC_028660: integrase; BS653_04210; phage(gi966198071)            2.45e-75            Shigellaflexneri4cMAALPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVALLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVSSLGTRWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
745127..745824                     PHAGE_Entero_P1_NC_005856: InsA; BS653_04215; phage(gi46401643)                      7.01e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWYGSHCRSQNRWSCMTRSSGIITNTISAA
complement(745841..746011)         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; BS653_04220; phage(gi169257268)     4.99e-07            Shigellaflexneri4cMSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHQISSG
complement(746013..746180)         DNA-binding protein; BS653_04225                                                     N/A                 Shigellaflexneri4cMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
complement(746228..747434)         PROPHAGE_Escher_CFT073: transposase; BS653_04230; phage(gi26249430)                  8.87e-43            Shigellaflexneri4cMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAQRLAVRRRLCVSGFASMSGIPGRWRAHHRTSASERAGAKSTAPQRYPSPGFRLFCEGGVRPPLEKMMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVKSGVSCYGKVSEWPDALWHVSWRLWDLPVFSGVKRSVRPSAGKPLPQATATVSSWQNDLTSCGWLILLTSAHGGASSMWRSSLMCLPDTSWGGGSHRPWKRHSCWMHWSRRYGPVDRPARSITVIKVLSMYRWPTHSGLRKPDYWHQQEVQATRMTTRWRRASMVFTKRRYTVRAGKTVQKWNWPHRGWTGITIDDCWKGWATSSGRSRKSLLCFHRKRSGSLA
complement(747509..748606)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; BS653_04235; phage(gi401817570)     0.0                 Shigellaflexneri4cMALFQRAINTQAYLKAGIMGFAGDGKTYTASELAIGLVMLMRQRGIEAGNRPVMFLDTETGSDWVKPRFDAENIELFTAKTRSFVDLLEAINEAESSGSVMIIDSISHFWTGLCDEYARRRNRKRGLEFSDWAWLKQEWRRFTDRFVNSQAHIIMCGRAGYEYDFFEGDDGKRQLAKTGIKMKAETETGYEPSIRIQMEKQMNIETGQVWRTARILKDRSTRIDGQVFSNPTFKNFLPHIESLNLGGEHPGIDTSRDNSELFANDGTPTWLKEKRAKEIALDEIIELLNKHHGGTSNDAKRAKADLLEKTFTSRSWERIKGMDWPTIKAGRNALWIELEGVEYAFPDPQTQNETQQAGYDENIPV
complement(748612..748932)         PHAGE_Entero_Min27_NC_010237: host-nuclease inhibitor protein Gam; BS653_04240; phage(gi170783625)     2.18e-53            Shigellaflexneri4cMSVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHLQRHGANKQAISHAFDDDVEFQERMAEHIRYMAETIAHHQVDIDLED
748971..750127                     PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_04245; phage(gi21231087)            2.41e-08            Shigellaflexneri4cMSRKTQRYSKFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNRRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDLHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRVKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
complement(750175..751599)         PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; BS653_04250; phage(gi169257272)     3.11e-43            Shigellaflexneri4cMNTDKQVYPLYYEAKNDKVRKRLGIKGGFYWAEAKKLSIAISRGAVAIDDAGYDEDDFKKPVRVNLPVVDDLPPEGVFDTEFCNRYEKGGEDGITMVFIASSPSVQDKPASTDNTNVNGEDMTEIEENMLLPVSGQELPIRWLAQHGSEKPVTHVSRDELQALHIARDEELPAVTALAVSHKTSLLDPLEIRDLHKLVRDTDRVFPNPGNSSLGLMTAFFEAYMDADYTDRGLLTKEWMKGNRVSRITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDVDIYNLHPAHAKRVEEIIAENKPPFSVFRDKFITMPGGMDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKTQPSGAMADEQATAETMEPDATEHHQNTQPLDAQSQVNSVDEKYQELRAELHEARKNIPPKNPVDADKLLAALR
complement(751699..751974)         hypothetical protein; BS653_04255                                                    N/A                 Shigellaflexneri4cMITSYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLNDGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI
complement(752049..752225)         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; BS653_04260; phage(gi169257274)     1.01e-06            Shigellaflexneri4cMVMTKKIKCAYHLCNKEIEESKIITRPLHFMRGVIPTTEMKKYCSEICAEKDQMAHEL
complement(752219..752440)         PHAGE_Shigel_Stx_NC_029120: Kil protein; BS653_04265; phage(gi985761255)             2.10e-46            Shigellaflexneri4cMIAHHFGTDEIPRQCVTPGDYILHEGRTYIASANNIKKRKLYIRSLTTKTCISDCMIKVFLGRDGLPVKAESW
complement(752517..753790)         PROPHAGE_Escher_CFT073: transposase insC; BS653_04270; phage(gi26249447)             6.58e-63            Shigellaflexneri4cVIVLIPVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLIIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRHCTGRLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCVVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAG
complement(753787..754675)         PHAGE_Entero_mEp460_NC_019716: regulatory protein Rha; BS653_04275; phage(gi428782357)     7.42e-71            Shigellaflexneri4cMLNVAIENQNGWNYSASAPHKTGAGRGNPNVTRAHSRAEAVFLCVMHSSIQIMVGCAGQSQDWPGSRVTGISTPVRLTTLMVVENLGGELINLSLEDAIMATIPALSHPDVTIENGRAVTTSVAVAEFFHKRHDNVLRAIANTECSPEFNALNFEDVTYTDTKGEKRPMYQITKNGFVFLVMGFTGKKAAAFKEAYIADVRPHGGRTAPEYPVRQDDSGRSHSGCALRRTRQYQIHRNCSRCTGLYPGYFPVLSGKTGVGSCKPERNKYDRRAAARLAPISRQPVSLIVA
754942..755031                     hypothetical protein; BS653_04280                                                    N/A                 Shigellaflexneri4cLSLKRMVNLTTRCPQRGRNNSAILTAASFR
complement(755246..755542)         hypothetical protein; BS653_04285                                                    N/A                 Shigellaflexneri4cMSFRIFIAFLDRERLQYRYCSLRKTFWTKIHGNLARASIALSGIHNRSSNQLARFAVFTLELKLFYLREFCFERSLIAFRDCQLINEMTNIQAECLTT
complement(755801..755893)         general secretion pathway protein GspL; BS653_04290                                  N/A                 Shigellaflexneri4cMSINIDGRDCCQTGQFSQDVADGALTVVLR
755899..756510                     PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; BS653_04295; phage(gi157166064)     3.64e-08            Shigellaflexneri4cMNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDIRDFSAQYSHRNVYSIPTIFHYGMFRAFITGVILRPVRGAGCSCLWRNARAFYSHIVRNAPWKLKKSLIPVIPKVAQ
756399..757022                     PHAGE_Escher_Av_05_NC_025830: tail fiber protein; BS653_04300; phage(gi730985066)     1.44e-41            Shigellaflexneri4cMLMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPLTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
759201..759214                     attR                                                                                 N/A                 GCACGTCGTATGCA
768423..768435                     attR                                                                                 N/A                 TTAACATTAATCT

#### region 6 ####
903860..904557                     PHAGE_Entero_P1_NC_005856: InsA; BS653_05155; phage(gi46401643)                      7.01e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSGNALWPHWSVFACCRPLRSWYGRMAVRCMNHARESCTLSASVTLSALSDIIIDNIWQGWYGSHCRSQNRWSCMTRSSGIITNTISAA
904524..905453                     PROPHAGE_Escher_CFT073: transposase insF; BS653_05160; phage(gi26249410)             0.0                 Shigellaflexneri4cRALSEHKTLSVSWSHYPGVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(905478..905657)         PHAGE_Entero_933W_NC_000924: protein S; BS653_05165; phage(gi9632510)                1.14e-31            Shigellaflexneri4cMDQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTEVYWQ
complement(905807..905968)         PHAGE_Stx2_c_86_NC_008464: hypothetical protein; BS653_05170; phage(gi116221995)     5.74e-20            Shigellaflexneri4cMILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLVLEINAPASS
complement(905965..906153)         PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; BS653_05175; phage(gi209427766)     9.29e-34            Shigellaflexneri4cMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE
906413..906748                     PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; BS653_05180; phage(gi209447168)     2.66e-54            Shigellaflexneri4cMKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFTLTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQICPYGLKQQSP
complement(907029..907115)         DUF3927 domain-containing protein; BS653_05185                                       N/A                 Shigellaflexneri4cMSVPADGVLVAGVVVVAFPLLKKKTPDC
complement(907196..907522)         hypothetical protein; BS653_05190                                                    N/A                 Shigellaflexneri4cMVFSALSIYHSYGVGRVNIDEASGCFILRQRIDIVNAARAKAFSRLTVLFCTPDRLSGRDVIILNSDAIQRVCDEFMVANSELFALVQEYNRIARTCGMDELRITHLG
complement(907660..907736)         tRNA                                                                                 N/A                 GCGTTGTTAGCTCAGCCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGGTTCGAATCCAGTACAGCGCGCCA
complement(907838..907913)         tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA
complement(908058..908879)         PHAGE_Entero_HK225_NC_019717: late gene regulator Q; BS653_05205; phage(gi428782441)     1.86e-111           Shigellaflexneri4cMKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASYAFEDYARSAASKKQCPCCYGEKFIESIVFTNKIQYPDGKPPVWAKCTKGVYPFYWEEWKKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGYERLPSTEAFNAICEVTNQITRASWEKTVKKFYDALVTRFDIEEAWAERQLKKVTR
complement(908894..909250)         PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; BS653_05210; phage(gi985761276)     2.96e-46            Shigellaflexneri4cMLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQRLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQPVSGGRLGVKIYPIMH
complement(909263..910312)         PHAGE_Entero_mEp460_NC_019716: hypothetical protein; BS653_05215; phage(gi428782365)     2.41e-135           Shigellaflexneri4cMRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPHAHQQQNPQQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYKRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG
complement(910314..910592)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; BS653_05220; phage(gi401817580)     3.94e-14            Shigellaflexneri4cMARNAKYYNHDNSTVLAHTHERYSHAFKSDWYQHPSCTEEQAEWLIQCYRRRGCEVKKALSLDYRHIISVRLPYSEQPPRPSRTFQQRIWR
complement(910659..910910)         hypothetical protein; BS653_05225                                                    N/A                 Shigellaflexneri4cMMNIEELRKIFCEDGLYAVCVENGNIVSHYRIVCLQKNGAALINFVDARVTDGFILRDGEFVTSLQALKEIGIKAGFSAFSEE
complement(911128..911283)         PHAGE_Entero_933W_NC_000924: host killer protein; BS653_05230; phage(gi9632541)      1.17e-25            Shigellaflexneri4cMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
complement(911355..911642)         mRNA interferase RelE; BS653_05235                                                   N/A                 Shigellaflexneri4cMAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL
complement(911642..911881)         antitoxin RelB; BS653_05240                                                          N/A                 Shigellaflexneri4cMGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
911906..912211                     hypothetical protein; BS653_05245                                                    N/A                 Shigellaflexneri4cMSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLFFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVRCTGNSGHYHLFFF
complement(912208..913364)         PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_05250; phage(gi21231087)            7.88e-09            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRLLAA
913426..914445                     PHAGE_Burkho_phi1026b_NC_005284: gp59; BS653_05255; phage(gi38707949)                2.89e-12            Shigellaflexneri4cSPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL
914534..915994                     oxidoreductase; BS653_05260                                                          N/A                 Shigellaflexneri4cMGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLEHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRHAAYGMMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK
complement(916030..916233)         PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; BS653_05265; phage(gi410491512)     4.86e-18            Shigellaflexneri4cMTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN
complement(916411..917097)         transcriptional regulator; BS653_05270                                               N/A                 Shigellaflexneri4cMTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
complement(917186..917932)         PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; BS653_05275; phage(gi971760361)     2.64e-10            Shigellaflexneri4cMIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELTDELGDNLYIAQLDVRNRAAIEEMLASLPAEWSNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ

#### region 7 ####
complement(1244121..1244573)       PHAGE_Proteu_vB_PmiM_Pm5461_NC_028762: nudix hydrolase; BS653_07060; phage(gi971741020)     4.20e-07            Shigellaflexneri4cMKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
complement(1244691..1246463)       aspartate--tRNA ligase; BS653_07065                                                  N/A                 Shigellaflexneri4cMRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN
1246773..1247027                   nicotinamidase; BS653_07070                                                          N/A                 Shigellaflexneri4cMLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPVTLFVPLIMGC
1247219..1248415                   PROPHAGE_Escher_CFT073: transposase; BS653_07075; phage(gi26248352)                  0.0                 Shigellaflexneri4cMTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQVLIALARRRCDVLFAMMRDGTFYTPQGS
1248442..1248789                   hydrolase; BS653_07080                                                               N/A                 Shigellaflexneri4cSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILHAL
complement(1248871..1248987)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_07085; phage(gi18249922)     5.17e-06            Shigellaflexneri4cMNFADFHMTWQSNALIILKKTHALGRSLVIFKNPVSRS
1249144..1249392                   PHAGE_Entero_cdtI_NC_009514: hypothetical protein; BS653_07090; phage(gi148609412)     1.47e-52            Shigellaflexneri4cMRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH
complement(1249389..1249523)       capsid protein; BS653_07095                                                          N/A                 Shigellaflexneri4cMIGGGGRSDRRHVVCKNVLRLAGELPIVRVLNDFQPLLILRAN
1249522..1249728                   hypothetical protein; BS653_07100                                                    N/A                 Shigellaflexneri4cMIGQYQYSTSKDRKLAVSAKHRPDGEKTKRYAKMPRFQKNKKPLMDSLLNTVFYIHDSLIPVALIAII
1249991..1251742                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_07105; phage(gi169257209)     6.92e-09            Shigellaflexneri4cMLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEEQRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLTQLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPELLETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLPENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSHALQSLQRLTSSPDYHGPQIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(1251743..1251922)       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_07110; phage(gi849255281)     3.08e-06            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(1251922..1252546)       hypothetical protein; BS653_07115                                                    N/A                 Shigellaflexneri4cMLMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFRQGPGSSLHSHRCCTDGSANLAGTAKWQMGDSPIHCDTRNAGSGQRGQTSGNSMAHRTGGEAVHVMERPHVERRLVSGPPVPGGHAGKICRGTNTYGVECGSAGETVDAGTGRTGGSNGAGAGRSQRDLSPSAGDERGAEQSGFGFNSGVRVA
complement(1252497..1253908)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_07120; phage(gi18249920)     6.94e-68            Shigellaflexneri4cMAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEVMKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYRYWPISRLTGKIPQKILFTESWRALSATDGETLTLAGLLLRTREKLTVIKSSDLSGGSHTEAHDWDRWGFQCPVLPPERIHPHNFSLRDVQSIHYQGHIAPCPGCRMLMSLAQCPGFLFAHRGA
complement(1253972..1254571)       PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; BS653_07125; phage(gi148609401)     4.21e-132           Shigellaflexneri4cMRKLYAAILSAAICLAVSGAPAWASEHRSTLSAGYLHASTNAPGSDDLNGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGLSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAWGAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF
complement(1254639..1258118)       PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; BS653_07130; phage(gi148609400)     0.0                 Shigellaflexneri4cMGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKSVLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITRTITSANIDRLRLTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTTSQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCLWDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNVVEVNWIDPDNGHETATELVEDTQAIVRYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQLALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITVVPKLAVYDPTVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKSAFVEAVGRASDDAEGYLSFYKGLINKTHLGKELWTQIDNGQLAPDLTEIRTSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVGKPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCRLIVKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLVVVMKKSTAGISIS
complement(1258179..1258819)       PHAGE_Entero_cdtI_NC_009514: putative tail component; BS653_07135; phage(gi148609399)     4.35e-68            Shigellaflexneri4cMAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGQLLWRLLYGCRGELWRVICCFLSVPVRLAVLHRCWHRKPELPVHRQRITANRTPVSPHWITWLPRAMFCLFCTVKCAWGRGWYLRRSARQTKGMVVRLWLVAGA
complement(1258717..1259460)       PHAGE_Entero_cdtI_NC_009514: putative tail protein; BS653_07140; phage(gi148609398)     5.11e-167           Shigellaflexneri4cMTQTESAILAHARRCAPAESCGFVVRTPEGDRYLPSENISGEPEERFRMAPEDWLRAQMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHREWHASAFTGICNDLAAASTFV
complement(1259465..1260163)       PHAGE_Entero_cdtI_NC_009514: putative minor tail protein; BS653_07145; phage(gi148609397)     2.42e-155           Shigellaflexneri4cMQDIRQETLNECTRAEQSARVELWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQAYPIQGSGFELNGRGCAARPTLTVSNLHGMVTGMAEDLQSLVGGTVVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDGAVFPGRIMLANTCMWTYRSDECGYTGRAVADEFDKPTTDIRKDKCSKCMRGCELRNNTGNFGGFLSINKLSQ
complement(1260163..1260492)       PHAGE_Entero_cdtI_NC_009514: putative minor tail protein; BS653_07150; phage(gi148609396)     1.49e-73            Shigellaflexneri4cMETFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSTYSVTIRVRKGEHPSLKAFLERHGGVRAFQWTPPYDWKLIRVVCRKWSASVGALWVTVTADFEQVVN
complement(1260492..1263531)       PHAGE_Entero_cdtI_NC_009514: putative tail protein; BS653_07155; phage(gi148609395)     0.0                 Shigellaflexneri4cMDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQRFMERQTQAARQTMQAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQKMREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQDYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGVSSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRAGWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEKFNRQLALTGHYAGVTVGQLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDTINQFKRLKDDPVNAAKALDNALHFLNATQLEQIRVLGEQGRSSDAARIAMSALAEETGKRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYPWTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKNELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGDKQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRLRRCRGASDNMKTNATGRNWKWRRATGKTVPCGRFRILRRMRIMRRERQNRCLQWHSAVPVMHWRHSVPPVSILNPSPLPCCQIWPELWHRWPCRRRASVLYSASRLMLMAVFTSLLIVATVARWLTVRRFLLLQKARVWGSGTSHSATASRCWAGGCGGYWWFRHGDVCPAVQHDQRRHERADRSGCPEGGLPREKSGRGLYATAGPWWPVKWSIPVA
complement(1263503..1263832)       PHAGE_Entero_cdtI_NC_009514: putative minor tail protein; BS653_07160; phage(gi148609394)     2.23e-74            Shigellaflexneri4cMQFVMRLAREFRRADWRRMLSDMSATELGEWGDYFRMQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH
complement(1263841..1264226)       PHAGE_Entero_cdtI_NC_009514: putative tail component; BS653_07165; phage(gi148609393)     2.95e-63            Shigellaflexneri4cMFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGRRGFCRAVWGPLRMPGMMIMRRRRKSPGA
complement(1264285..1265025)       PHAGE_Entero_cdtI_NC_009514: putative major tail subunit; BS653_07170; phage(gi148609392)     2.72e-170           Shigellaflexneri4cMTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKGVKQGSVSIVGMTSDGEFVAVAAVTVSAP
complement(1265036..1265437)       PHAGE_Entero_cdtI_NC_009514: putative tail component; BS653_07175; phage(gi148609391)     9.34e-93            Shigellaflexneri4cMNRHTQIRQSVLARLREQCGDSATFFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDVPALSGLIDTLNPLGFNYQRDNEMATWAMAEITYQITYTN
complement(1265434..1266024)       PHAGE_Entero_cdtI_NC_009514: putative tail component; BS653_07180; phage(gi148609390)     1.02e-103           Shigellaflexneri4cMKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAGNTVAGDNQVKGIPLKLVRQRVRVFKASPSGKMTARIRVNRGNPPAIKLNTTRRRAGEGLRVGKYFFRGAFVQQLANGRWHVLRCLPEARFATGHDHQGRLRKNRLPVEVVKIPLSGPLTQAFEDARDRIIAAEMPKQLGYALKQQLRLHLSK
complement(1266011..1266382)       PHAGE_Entero_lambda_NC_001416: head-tail joining protein; BS653_07185; phage(gi9626253)     1.28e-35            Shigellaflexneri4cMADFDNLFDVALDLADKAIIRNMGIRAVITSGRLKGIMISGVFDDPENISLVAGGVRIEDSLPSLFVKTADILRLCRNDSLMIGRESFCVDRITPDDGGCSYIRLRREGLPGNVRAGRYYEGA
complement(1266394..1266795)       PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; BS653_07190; phage(gi100042)     1.78e-48            Shigellaflexneri4cMAKKDDNLKRLRELAASLGREPDISGSAADIAQRVAELEEELANMDDTDIRDKSAHPENALTGHENEVISAQPETVIQNMDDLVTVVALVTLHTDALHATRDEPLAFVPPGMAFRVFAGVAAGMTERGLARMQ
1267058..1268254                   PROPHAGE_Escher_CFT073: transposase; BS653_07195; phage(gi26248352)                  0.0                 Shigellaflexneri4cMTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQVLIALARRRCDVLFAMMRDGTFYTPQGS
complement(1268479..1268775)       hypothetical protein; BS653_07200                                                    N/A                 Shigellaflexneri4cMIHHSGVVNISSDNLQNILSKPREHTLNCLGWRFFVQRSVCVSWKSDFAWTGIMLLFRGEELAFSSAFSPVTIRKIMKCPPPGRRTVEKRTRQQKHWG
complement(1268953..1269027)       tRNA                                                                                 N/A                 GCGGGCATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCA
complement(1269031..1269106)       tRNA                                                                                 N/A                 GCCGACTTAGCTCAGCAGGCAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCA
complement(1269109..1269185)       tRNA                                                                                 N/A                 CCACCACTAGCTCATCCGGATAGAGCATCAACCTTCTAAGTTGACGGTCCGAGGTTCGAGTCCTCGGTGGTGGGCCA
complement(1269187..1269262)       tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCA
complement(1269439..1270128)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; BS653_07225; phage(gi169257244)     1.55e-97            Shigellaflexneri4cMNNQYLQFVREQLIIATADLSGATKGQLEAWQENAMFDTGRYRRKKIRYRDEVTGKMITRDNPPIPGKQSLAKGASIPLVSQVAFSTSSWRRAVLSLEEHYKAWLLWCYSGSICWEYQITITHWAWEEFKAHSGTRKIAEKTQERLKKLIWLAAQAVKAELFGGEGYEYQELALLAGVTTKNWSKTFTGHWVVMKHIFHRLDSEALLFVMRTRSEQKAAFSKQSIAKVD
complement(1270125..1270484)       PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; BS653_07230; phage(gi985761276)     2.25e-52            Shigellaflexneri4cMRHEFILPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDETNIVRGLPVPGGRLGIKITELECA
complement(1270484..1270672)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_07235; phage(gi18249884)     8.29e-25            Shigellaflexneri4cMPFYFRKECPLNSGYLNMVPALRELMQAKHRAQKAVDELVDCVAELETRVGKFEKLVQEVLR
1270688..1271844                   PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_07240; phage(gi21231087)            2.58e-08            Shigellaflexneri4cMSRKTQRYSKFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRVKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
complement(1271868..1272050)       hypothetical protein; BS653_07245                                                    N/A                 Shigellaflexneri4cMSYFLNHFSVYCFLAMSLRSRLIVRWCARVYSVVDSPRFHISFPLKIKRLSGWRCEVYWQ
1272157..1272345                   PHAGE_Cronob_vB_CsaM_GAP31_NC_019400: hypothetical protein; BS653_07250; phage(gi414086809)     9.81e-05            Shigellaflexneri4cMNIYFRIVISLAIIACIYGLIVPALISMKDTVAVISGFALACLTPPCIYAIYKGLSFSKDKR
1272342..1273169                   PHAGE_Entero_phiP27_NC_003356: putative serine protease; BS653_07255; phage(gi18249869)     0.0                 Shigellaflexneri4cMKKVIPALALVLLTTGLVGCDRVEPGNVGIKVNKLGDDKGVGEVVGVGRYWTGWNTEVYIFPTFKQMKTYDEPFSFQMSDGTTIGYHIGVAYKVDPSKVTTVFQTYRKGVDDITDTDLRQKIADALNRLASKMTTDKFIDGGKSELLDAALKDIQEEMTPIGIQVMSLSYVGKPEYPPTVIDSINAKVTANQKTLQCEQEVKQREAEANMLRAEAAGQADAIRTKAQAEADAIRLRGEALRQNPNVMELEAINKWNGTLPQYMTSGANTPFIQVK
1273213..1273962                   PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_07260; phage(gi18249878)     9.74e-70            Shigellaflexneri4cMNTVTINNKQFPVIEYRGQRVVTLAMIDEVHQRPEGTARAAFNRNREHFISGVDYAELGADVIRTDLPEGTFSKFAPSGIVLFESGYLMLTKPFNDALAWQVQRELVNSYFRTRTPLTEIEMIAAIAADAVRQQKRLNHVEEQLETVTEAVETIKRGNMRAGYVGYRQVVAKSGMSDTKCRNLVNAYQIPTDTHEFMTPDGLLSRRAIVELEPFMAAFHQMMSEADPRGTRWYHPKMGLFQVIGWEDKA
1273959..1274528                   PHAGE_Shewan_1/41_NC_025458: DNA polymerase III beta subunit; BS653_07265; phage(gi712915574)     4.63e-34            Shigellaflexneri4cMIIQSKLIRAALVCAAKNDVRYYLNGLHITPKHIEATNGSVALRMAHGIRTKKNIIVQFEGGVPAKAETTELIFSKEPIAVHRDQFQRRLSITGIKLVDGCFPDLDRIIPKKFDRCTHPVLQAGYLSYPEKMFGRERKFIPVQLRPSGDGQAVRIQFDSIINSMYGNPEFVVMPCRDHGDFNVAQEHPE
1274652..1274894                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; BS653_07270; phage(gi157165989)     9.82e-44            Shigellaflexneri4cMFALIQRGQIYTDRAGYPVEITRSTEHSVFFRRMDGRTGRVRIGEFSSLFEHIDHLEYHKILAETEQEKHLKKLRAMQRK
1274898..1275044                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; BS653_07275; phage(gi157165988)     2.46e-25            Shigellaflexneri4cMNKAFELWVHQRYGNHYDLTRDVDGFYCREIVKRMFEVWCHCRGLSVV
1275053..1275250                   PHAGE_Entero_phiP27_NC_003356: putative excisionase; BS653_07280; phage(gi18249866)     1.12e-33            Shigellaflexneri4cMGNVIQLAPNEWVCESVLIAITGLKPGTILRTRKECWMVGREYIHVSPDGNPKPSEVVNKNWPPS
complement(1275225..1276382)       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; BS653_07285; phage(gi41057343)     2.02e-51            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSERIILWSHSAMCSGFIAAATDTGKTVLKNQTADGLYYAVRYLSYMASATVRPEQEASPQWQPGEATRWDAGLLAGSKSWGWSAVSSRLTGINVVVMNMLLSLTTLKGSSPPSQIRCGAVMPISGRVSAGRTSPLFSTCSQENQWAGPCRSRRTAGSPKRWKWHGKPVVSPAGCSTAIRAVIIRAGSSGSYCGDTRMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
1276612..1276962                   hypothetical protein; BS653_07290                                                    N/A                 Shigellaflexneri4cMLILDSRPVHASRPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
1277015..1277410                   hypothetical protein; BS653_07295                                                    N/A                 Shigellaflexneri4cMVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR
1277451..1278194                   PHAGE_Staphy_SPbeta_like_NC_029119: tRNA (cmo5U34)-methyltransferase; BS653_07300; phage(gi985761180)     1.17e-36            Shigellaflexneri4cMSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALKAEDAA
1278191..1279162                   tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; BS653_07305     N/A                 Shigellaflexneri4cMIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNTVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIVDVCVTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP
complement(1279327..1281756)       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_07310; phage(gi100132)     1.85e-65            Shigellaflexneri4cMALTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMSVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHERIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQASWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWTAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQRANACAGNSALVYIEKYTGNAPKLTAFDKPAVQA

#### region 8 ####
1364028..1364039                   attL                                                                                 N/A                 ATGCCTGCCAGT
1372844..1372856                   attL                                                                                 N/A                 ATGGCTTATGAAA
complement(1376477..1376746)       PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; BS653_07935; phage(gi428782810)     2.00e-25            Shigellaflexneri4cMLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQGFSEHIAPLQDAVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM
1376886..1377470                   methyltransferase; BS653_07940                                                       N/A                 Shigellaflexneri4cMGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
1377786..1379429                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_07945; phage(gi169257209)     3.38e-05            Shigellaflexneri4cMLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGENRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALKELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMSLELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQLSPRIMQTLLQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(1379430..1379609)       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_07950; phage(gi849255281)     3.08e-06            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(1379609..1380136)       PHAGE_Escher_Av_05_NC_025830: tail fiber protein; BS653_07955; phage(gi730985066)     6.37e-34            Shigellaflexneri4cMLKKRTNGSVRYCQYTSVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE
complement(1380129..1380998)       PROPHAGE_Escher_CFT073: transposase insF; BS653_07960; phage(gi26249410)             0.0                 Shigellaflexneri4cQHYPLIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDKRLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQLPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLGHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA
1381044..1381319                   PHAGE_Entero_P1_NC_005856: InsA; BS653_07965; phage(gi46401643)                      7.24e-60            Shigellaflexneri4cMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
1381238..1381462                   PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; BS653_07970; phage(gi557307573)      8.90e-43            Shigellaflexneri4cMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVF
complement(1381834..1382316)       hypothetical protein; BS653_07975                                                    N/A                 Shigellaflexneri4cMIKPFLMTVAILTSCCAQAKILTNEEIVSRFISNVKTSADNDVDLDTDGFRQLRISCPSPSASGAIILRKASYEFGKSIGVFDFANNASPATMTFLIPIYKDDDFDSDTVGFTFAFKMPRGQFFVDVKENGNIRAGVNVNGESGVTYENCKLNMKDINDD
complement(1382384..1384333)       PHAGE_Shigel_SfIV_NC_022749: tail tape measure protein; BS653_07980; phage(gi557307539)     0.0                 Shigellaflexneri4cMADSFQLKAIITAVDKVSAPLKGMQRQLKGFKKEFASLSLGAAGAGTAVLGALALPVKSAIALESKMADVRKVVDGLDTPEAFKAMTEQVRDLSTELPMSAEGIAEIVAAGGQAGIARDELMQFTDDAVKMGVAFDTTAEESGQMMAQWRTAFKLTQGEVAGLADKINYLGNTGPASAKKISDVVTRIGPLGSVAGVASGEIAAMGATIAGMGVESEIAATGIKNFMLSLTARDSATKSQKKVLRSLRISPKKLAADMQKDARGAMLHVLDSLAKVPKEKQAAVLKALFGKESLGAIAPLLTNLDLLRTNFNRVADAQQYGGSMQKEYAARAATTENQLLLLQNQINAISSTLGETFLPSLNEGIKEMKPFLEEVRTFVRENPEVVKTIAKTGAALLTMGVAIGTLTRITKIMGSVMNMTPAKGLIALLVGGAYLIIDNWETVGPVVKKVWQEVDQVVRAMGGWEQAVKTIATVSALYIGVKAVASIRAATVAQNQWTTAAGKTGLKLKGLGKISLIGGLLELGMMAQEFEKEHPWLVKNFVADALNSGFGLNDKFDEWGKQFHDFVYDMTGWQMPRGDGYLSPDKRYTPNVSLERNQLLSLASSPATRSELKVTFDNAPPGMRVIDLPKTGDPFMKITHDVGYSPFKR
complement(1384418..1384747)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; BS653_07985; phage(gi557307538)     1.81e-50            Shigellaflexneri4cMNVTEIVLKKPVTAHNEMLHVLELREPTYDEIEALGFPFIISGEGSIKLDSQVALKYIPLLAGIPCSSAAQMAKLDIFKTSMQILRFFTQSETGSTSGNDSTMLPGSGN
complement(1384753..1385109)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; BS653_07990; phage(gi557307537)     8.30e-70            Shigellaflexneri4cMAKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVPKNFPVDKITTSDQMTITAELANGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ
complement(1385109..1386605)       PHAGE_Shigel_SfIV_NC_022749: tail sheath protein; BS653_07995; phage(gi557307536)     0.0                 Shigellaflexneri4cMTISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICGAGSQLARMVEVYRQTDPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYVGRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDAGVVTLTARHKGLYGNELPVCLNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMMMTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDELVASRLAREAVFIRNDPARPTQTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTLQIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVEKYDLFKQYLIVERDADNPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA
complement(1386602..1386763)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; BS653_08000; phage(gi19549000)     4.40e-21            Shigellaflexneri4cMFVKPLKGRSVPDPARGDLLPSEGRNVEESSYWFRRIAAGDVVRVKQDKAKKS
complement(1386773..1387132)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; BS653_08005; phage(gi557307535)     2.84e-45            Shigellaflexneri4cLLPVHLNERDEKGQWAAYDAVHDVRRELWKALLGWMPDPQGGEIVYVGGTLLDLNRYELYYQFDFTAKYEITEEDTRQAEDVNALPDLSLLSIDVDYIDPGTGPDGDIEHHLEMRFPQN
complement(1387157..1388313)       PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_08010; phage(gi21231087)            1.20e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNRRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
complement(1388379..1389191)       PHAGE_Stx2_c_1717_NC_011357: transposase; BS653_08015; phage(gi209447153)            1.37e-68            Shigellaflexneri4cMNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSPPSENPIASKPESPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQLDIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDT
complement(1389211..1389538)       PHAGE_Stx2_c_1717_NC_011357: transposase; BS653_08020; phage(gi209447152)            7.44e-34            Shigellaflexneri4cMITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLAGDPGRESAPDASSVIHATGGDRVATSQTDRTAWHPDIA
complement(1389535..1390209)       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; BS653_08025; phage(gi209447151)     2.29e-09            Shigellaflexneri4cMNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIREMKGGIR
complement(1390308..1390523)       PHAGE_Entero_VT2phi_272_NC_028656: holin; BS653_08030; phage(gi966197762)            5.66e-35            Shigellaflexneri4cMKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGSLVLGFLTYLTNLYFKIREDKRKAARGE
complement(1390816..1390890)       tRNA                                                                                 N/A                 GCGGGCATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCA
complement(1390894..1390969)       tRNA                                                                                 N/A                 GCCGACTTGGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCA
complement(1390972..1391048)       tRNA                                                                                 N/A                 CCGCCACTAGCTCATCAGGAAAGAGCGTCAACCCTTTAAGTTGAGTGTGCGAGGTTCGAGTCCCCGGTGGCGGTCCA
complement(1391050..1391125)       tRNA                                                                                 N/A                 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA
complement(1391168..1391289)       antiterminator; BS653_08055                                                          N/A                 Shigellaflexneri4cLPILYVMAKANKTRPQAGFLCHLSRIDMVNALVEEIRVIFGA
complement(1391319..1392007)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; BS653_08060; phage(gi169257244)     5.37e-102           Shigellaflexneri4cMNNQYLQFVREQLIIATADLSGATKGQLEAWQENAMFDTGRYRRKKIRYRDEVTGKMITRDNPPIPGKQSLAKGTSIPLVSPVEFSTSSWRRAVLSLEEHYKAWLLWCYSGSICWEYQIAITQWAWNEFNAQSGTRKIAGKTQERLKKLIWLAAQAVKAELFGGEGYEYQELALLAGVTTKNWSKTFTRHWVAMKHIFHRLDSEALLFVMRTRSKKRRHFQSKVLQKIGA
complement(1392004..1392369)       PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; BS653_08065; phage(gi985761276)     2.73e-51            Shigellaflexneri4cMTERIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQRLKLNLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDEINIVRGQLVPGGRLGIKITELGCA
complement(1392370..1393428)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; BS653_08070; phage(gi557307571)     4.25e-110           Shigellaflexneri4cMRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPHAHQQQNPPQEETVVSIAVDPESPAQYLQRQKPQREEMPVYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTKADDLFVIPLCRKCHNELHAGVKDFEEKHGSQLLLLIRFLMHARNSGVLKWKA
complement(1393430..1393708)       PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; BS653_08075; phage(gi401817580)     3.96e-12            Shigellaflexneri4cMAHDTKFYNSDNSAAPASRHGRRSHAFKSDGYQHDPCTEEQAEWLIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR
1393649..1393901                   hypothetical protein; BS653_08080                                                    N/A                 Shigellaflexneri4cVPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDAHISGGEGFLPRRVSYSSGSAVA
complement(1393876..1394088)       PHAGE_Entero_933W_NC_000924: protein MokW; BS653_08085; phage(gi9632542)             5.94e-41            Shigellaflexneri4cMLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
complement(1394291..1394470)       hypothetical protein; BS653_08090                                                    N/A                 Shigellaflexneri4cMKNALQFLFVAFWLFASCMPIIFTARYMEKIDVLILMFGHINALFLGVFMAVMCIEYWR
complement(1394683..1395099)       PHAGE_Escher_Av_05_NC_025830: hypothetical protein; BS653_08095; phage(gi730985110)     4.70e-32            Shigellaflexneri4cMTELTKEQLIEEAKLKIAITKCHPNSGMARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGLTMSVKRPAN
1395144..1395266                   DUF4224 domain-containing protein; BS653_08100                                       N/A                 Shigellaflexneri4cMENGLPFYTNRSGKPIVSRDLFTCNKTLPPREVEPNFGAI
1395266..1396291                   PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; BS653_08105; phage(gi100105)     8.31e-130           Shigellaflexneri4cMGRRRKNPEHEKLPPNVYPNKYSYVWKPTSRESVTLTAIKDGLAALWKKYEETVNNRDRAMTFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWGYERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK
complement(1396344..1396433)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGGAGTGGGGGCAACTCCACCGGGGGTTCAAATCCCCCTCTCTCCGCCA
1396527..1397324                   protein MtfA; BS653_08115                                                            N/A                 Shigellaflexneri4cMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFLQQKRLVPLQGFELNSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH
1397358..1397370                   attR                                                                                 N/A                 ATGGCTTATGAAA
1397425..1397500                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
1397662..1398924                   PROPHAGE_Escher_CFT073: prophage P4 integrase; BS653_08125; phage(gi26248270)        0.0                 Shigellaflexneri4cISLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQRAAERGSRTPEKVFKNMALAHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGKNKFIP
complement(1399031..1400199)       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; BS653_08130; phage(gi24373865)       5.58e-10            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSERIILWSHSAMCSGFIAAATDTGKTVLKNQTADGLYYAVRYLSYMASATVRPEQEASPQWQPGEATRWDAGLLAGSKSWGWSAVSSRLTGINVVVMNMLLSLTTLKGSSPPSQIRCGAVMPISGRVSAGRTSPLFSTCSQENQWAGPCRSRRTAGSPKRWKWHGKPVVSPAGCSTAIRAVIIRAGSSGSYCGDTRSDRVAGAETAGITAQWNASSGVRTNGCRWWVTASARQLTPRTISLDITVHDRTNITVGYPQTNRKIDTGKTLTRWPVFVGA
1408723..1408734                   attR                                                                                 N/A                 ATGCCTGCCAGT

#### region 9 ####
1521778..1521857                   attL                                                                                 N/A                 GAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTG
complement(1536409..1537106)       PHAGE_Entero_P1_NC_005856: InsA; BS653_08835; phage(gi46401643)                      8.70e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSGNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWDGSHCRSQNRWSCMTRSSGIITNTISAA
1537197..1537658                   hypothetical protein; BS653_08840                                                    N/A                 Shigellaflexneri4cMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
complement(1537699..1537863)       hypothetical protein; BS653_08845                                                    N/A                 Shigellaflexneri4cDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS
complement(1537879..1538576)       PHAGE_Entero_P1_NC_005856: InsA; BS653_08850; phage(gi46401643)                      4.27e-56            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYIASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSGNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWDGSHCRSQNRWSCMTRSSGIITNTISAA
complement(1538610..1538945)       hypothetical protein; BS653_08855                                                    N/A                 Shigellaflexneri4cMISNDILRSVRYILKANNNDLVRILALDNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILVMLPTY
complement(1538992..1539711)       DNA-binding response regulator; BS653_08860                                          N/A                 Shigellaflexneri4cMIKVLIVDDEPLARENLRIFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
complement(1539708..1541393)       PHAGE_Entero_YYZ_2008_NC_011356: putative 2-component sensor protein YehU; BS653_08865; phage(gi209427798)     0.0                 Shigellaflexneri4cMYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
1541619..1542946                   PROPHAGE_Escher_MG1655: IS4 transposase; BS653_08870; phage(gi16132099)              1.27e-54            Shigellaflexneri4cMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPVPLFRPASAWEVRLSAACSRKQRSSGITPRRIRTGAAPCWPSMVCSGAHRIHQRTMQPSPARHMPGTRRSTRRSKWSARWNPAICRLQPSARRTAKMSLLSNLNKPAITLRWIKVITHWDCMAGAWRENTATGYLSERERNMKSSENWVKAIIWSKPARRHEKSGRDWEMKQPACPRAKEKSAICRRRTPCASPEEKWRICTVIAGKSNWDTGRNRRCNAGREVKSRSLWSKSCGVSYWLIIWDIRLKWRNIKVTGRINVSQNHAEWECHCRALHRDVYRSCAILQVWDNLNYRREGEGPSREWRRGPGNTPQPRKRASQLLAA
1543344..1543592                   PHAGE_Entero_cdtI_NC_009514: hypothetical protein; BS653_08875; phage(gi148609412)     2.94e-53            Shigellaflexneri4cMRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH
complement(1543708..1543977)       PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; BS653_08880; phage(gi428782810)     2.00e-25            Shigellaflexneri4cMLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQGFSEHIAPLQDAVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM
1544118..1544702                   methyltransferase; BS653_08885                                                       N/A                 Shigellaflexneri4cMGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
1545018..1546661                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_08890; phage(gi169257209)     3.38e-05            Shigellaflexneri4cMLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGENRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALKELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMSLELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQLSPRIMQTLLQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(1546662..1546841)       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_08895; phage(gi849255281)     3.08e-06            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(1546841..1547465)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_08900; phage(gi18249921)     1.70e-05            Shigellaflexneri4cMHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFRQGPGSPLHSHRCRTDGSANLAGTAKWQMGDSPIHCDTRNAGSGQRGQTSGNSMAHRTGGEAVHVMERSYLECWPRLTGPPVPGSHAGKICHSTNTYGVERCRSAGETVDAGTGRTGGSNGAGAGRSQRDLSPSANERGAERSGFGFNSGVRVA
complement(1547416..1548831)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_08905; phage(gi18249920)     1.10e-115           Shigellaflexneri4cMSVVISGALTDGAGIPMSGYHIILKSRVNTPEVVMNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKTANHLSETAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQFFITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTS
complement(1548855..1549400)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; BS653_08910; phage(gi18249919)     1.14e-94            Shigellaflexneri4cMLHLKNITAGNPKTAEQYQMTKRYSVTWLFSEDGKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKSSYNAIEWPASPEGSS
complement(1549403..1549816)       PHAGE_Entero_SfMu_NC_027382: tail fiber protein; BS653_08915; phage(gi849255282)     2.37e-28            Shigellaflexneri4cMAALPKNAAFYLWGNPSRPVVAELGDDSGWHFFSQRNPDNSIVFTVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFCAPSGHGLSGMAISDTGRNSADNVDGVYYRPLQKLINGTWYNVASI
1549858..1550555                   PHAGE_Entero_P1_NC_005856: InsA; BS653_08920; phage(gi46401643)                      7.16e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAVRCMNHARESCTLSASVTLSALSDIIIDNIWQGWDGSHCRSQNRWSCMTRPSGIITNTISAA
1550280..1550359                   attR                                                                                 N/A                 GAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTG
1550567..1550926                   PHAGE_Entero_phiP27_NC_003356: putative integrase; BS653_08925; phage(gi18249865)     5.93e-53            Shigellaflexneri4cYRSTVHKCTFVFSPQVIKQRQFSGPHYKVDSIRESWTSILKRAGLRHRKSYQSRHTYACWSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLNRRLSESVPCMPHKKAG
1550947..1551228                   transcriptional regulator; BS653_08930                                               N/A                 Shigellaflexneri4cMGLPLIPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKILLSNENVDVQNVWRDQQETLLTYLQSVNRPGNPGD
1551254..1552463                   PHAGE_Stx2_c_1717_NC_011357: putative transposase; BS653_08935; phage(gi209447180)     8.40e-59            Shigellaflexneri4cMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKKCHCWISCVSSTGADRYAANCILPRQRITTVSNSDIIRINAVPVRSAMTGRKRYSAYTMKITRYTVSLASVVTGRYQSGQMHCGTSHGGYGTCRCSPGKGPYDHRPESRCRRRPRKPSVRGRTTPAVGGFYLRQHMAGLRLCGVHHCVCRIHRGVAGLIVHGNDIRAGCTGAGVMGPSTVRHGPSQRFSVCIAGLHTAAGSRITGINRKYRRLVQRDGGEHQWSLQIGGNTPELEKPCRSGTGHTHVGGLVQSTIAGKAGPHPSGRSRKSLLCFHRKRSGSLA
1552460..1552961                   MerR family transcriptional regulator; BS653_08940                                   N/A                 Shigellaflexneri4cLSSQIKHSPGNPGRFSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLARPLAQSTTPTIRRPYIAGVVRKSNLRPTAATHQLARTRPYFPTRYLA
1553021..1553128                   hypothetical protein; BS653_08945                                                    N/A                 Shigellaflexneri4cMRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG
complement(1553109..1553840)       osmoprotectant uptake system permease; BS653_08950                                   N/A                 Shigellaflexneri4cMKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGVLPILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQHAK
complement(1553845..1554771)       PHAGE_Bacill_G_NC_023719: gp245; BS653_08955; phage(gi593777701)                     1.76e-29            Shigellaflexneri4cMIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSELGVHLLSLRSVADYVRREERAEGEALAEEMTLRDALSLFVARGCEVLPVVNTQGQPCGTLHFQDLLVEA

#### region 10 ####
1993971..1995527                   PHAGE_Bacill_BM5_NC_029069: hypothetical protein; BS653_11140; phage(gi985757795)     2.78e-11            Shigellaflexneri4cMKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
complement(1995524..1996060)       PHAGE_Achrom_83_24_NC_028834: tRNA-specific adenosine deaminase; BS653_11145; phage(gi971747971)     4.32e-07            Shigellaflexneri4cMRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD
complement(1996085..1996720)       phosphatidylglycerophosphatase C; BS653_11150                                        N/A                 Shigellaflexneri4cMATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
1996929..1997777                   MurR/RpiR family transcriptional regulator; BS653_11155                              N/A                 Shigellaflexneri4cMNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAALRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV
complement(1998116..1998670)       PHAGE_Escher_pro483_NC_028943: DNA invertase; BS653_11160; phage(gi971758535)        2.86e-113           Shigellaflexneri4cMLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLKTLSAGDTLVVWKLDRLGRSMRHLVVLVEALRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLEAARAQGRIGGRRPKLSPEWAQAGRLIASGVSRQKVAIIYDVGESTLYKRFPARVI
1999176..1999803                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; BS653_11165; phage(gi169257209)     2.67e-05            Shigellaflexneri4cMREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQRTEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKELIARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLKKLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLA
2000135..2001001                   invasion protein; BS653_11170                                                        N/A                 Shigellaflexneri4cMAAWFPEADRREVSTQWTSFSTEENSRAFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFTVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
complement(2001002..2001181)       PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; BS653_11175; phage(gi849255281)     3.08e-06            Shigellaflexneri4cMNKPQLAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYAM
complement(2001181..2001805)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; BS653_11180; phage(gi18249921)     1.70e-05            Shigellaflexneri4cMHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFRQGPGSPLHSHRCRTDGSANLAGTAKWQMGDSPIHCDTRNAGSGQRGQTSGNSMAHRTGGEAVHVMERSYLECWPRLTGPPVPGSHAGKICHSTNTYGVERCRSAGETVDAGTGRTGGSNGAGAGRSQRDLSPSANERGAERSGFGFNSGVRVA
complement(2001756..2003022)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_11185; phage(gi18249920)     9.33e-75            Shigellaflexneri4cMSVVISGALTDGAGIPMSGYHIILKSRVNTPEVVMNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAAGYARAAEQAKNDIDAALTGTLKTANHLSETAAAGEKAQQKSRDNLGKVRPRWKHRATFTTGQKAVWRYPAHSALGVLFCLKMLSVLTLRVISWPGGMRCQVNIPLLAPTASSYPTHGLKGCSASGGLMHALRQQNRGTEPNPLLFTALTAPFITPATATGPYPDLAGKIPQKILFTESWRALSATDGETLTLAGLLLRTREKLTVIKSSDLSGAVIQRLTTGTGGDFSARYSHRNVYSIPTIFHYGMFRAFITGVILRPVRGAGCTCLWRNARAFYSHIVA
complement(2003046..2003591)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; BS653_11190; phage(gi18249919)     1.14e-94            Shigellaflexneri4cMLHLKNITAGNPKTAEQYQMTKRYSVTWLFSEDGKNWYEELKNFASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKSSYNAIEWPASPEGSS
complement(2003594..2004067)       PHAGE_Entero_SfMu_NC_027382: tail fiber protein; BS653_11195; phage(gi849255282)     2.14e-28            Shigellaflexneri4cMAIAFKNIQAGTARKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFFSQRNPDNSIVFTVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFCAPSGHGLSGMAISDTGRNSADNVDGVYYRPLQKLINGTWYNVASI
2004131..2005404                   PROPHAGE_Escher_CFT073: transposase insC; BS653_11200; phage(gi26249447)             5.59e-64            Shigellaflexneri4cVIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRYCTGRLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCGVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAG
complement(2005329..2006315)       PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; BS653_11205; phage(gi18249918)     5.03e-82            Shigellaflexneri4cMKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTARDNLQVYSKEQSDQRYVHREGDKITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGEISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFRWICPYISRHLLSLNPLQARCRRYSRGER
complement(2006302..2006907)       PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; BS653_11210; phage(gi422937564)     6.46e-40            Shigellaflexneri4cMQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIVGVSRWLTVKDDFNYLGFSESRMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMSYVFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ
complement(2006909..2007591)       PHAGE_Acinet_phiAC_1_NC_028995: putative baseplate J-like protein; BS653_11215; phage(gi971763836)     1.30e-07            Shigellaflexneri4cVPGSDEETRADFENRRRNSVARNARNILEAIRGEILSTVENVVDVYVTHNPKKTEQKAGVSIHHPVRFMLACTAAARQISRRPSGVRLRRVLIMATQRSLLQIRSTIRRILNTSAGRHSNPSVCMSVRKKVTTCLQILPDRYSNPCWTHLMVQMVVCGQELPLLSLPGATMPAFTKPIRNILIFWALLAVMVRHGQRLSLSGMRFRFWMCRISVNSRRHAA
2007671..2008827                   PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_11220; phage(gi21231087)            1.67e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRKDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA

#### region 11 ####
complement(2139705..2140402)       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_11955; phage(gi100131)     3.09e-51            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWYGSHCRSQNRWSCMTRSSGIITNTISAA
complement(2140436..2140630)       hypothetical protein; BS653_11960                                                    N/A                 Shigellaflexneri4cMIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIVSIGEPFFFRVIVPFKIKVMLPTY
2140706..2143267                   PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; BS653_11965; phage(gi374671664)     1.53e-12            Shigellaflexneri4cMSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRSNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
2143373..2144025                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_11970; phage(gi100100)     4.52e-30            Shigellaflexneri4cMPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPETDLLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMALDAFATGDGNMWLASGGDWFFDLNDCNKRQFCCNSITFHILLKSLTTNMSSHMQIIRVMNISLAKKRRANYSGLFIVCRNRLMASYNKTALIILYLDICLITFRRSLTRFILIPDRRKVGGCHFIKGAG
complement(2144076..2144843)       PHAGE_Escher_RCS47_NC_042128: DNA helicase; BS653_11975; phage(gi100021)             7.44e-94            Shigellaflexneri4cMIPVERRQIILEMVAEKGIVSIAELTDRINVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVLPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLCSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE
2145039..2145266                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_11980; phage(gi100020)     6.05e-14            Shigellaflexneri4cMKTGSEFHVGIVGLGSMGMGAALSCVRAGFSTWGADLNSNACATLKEAGACGVSDNAATFAEKLDALLVLVVNAA
2145276..2145947                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_11985; phage(gi100020)     1.21e-119           Shigellaflexneri4cMLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLVPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGAKS
2145944..2146177                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BS653_11990; phage(gi100019)     2.70e-28            Shigellaflexneri4cMIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQHEVA
2146229..2147340                   PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_11995; phage(gi21231087)            1.55e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRVKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGIGA
2147402..2148558                   PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_12000; phage(gi21231087)            1.60e-10            Shigellaflexneri4cMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRLLAA
complement(2148792..2150888)       PHAGE_Pseudo_JBD93_NC_030918: DNA topoisomerase II large subunit; BS653_12005; phage(gi100005)     5.21e-83            Shigellaflexneri4cMQSYVTVNDLLGVPGMPATTKGIRQALQRFSRDLGDVSRRREGTKAIEYHIDCLPEITRKALRERYVEQLVATENNVSEVKAVTRKTRNPDAVQAIEAYRGSPQLMEERLNALTENQRWVSEARAALVVEVLKLESAGNPGRLKAINFLVEKARKGELPERLQQAAVNANAKRGANRTISRDPLYQWVLKYNQSQNAAERLLLLAPGKRDEIKPEEISWLPEFLAQYRQVNGRPMSEAYEDFVAEWQRRHADEPYMLEVMPSYDVVRYAMKKLPEVVKQKGRVTGSEYRQLEGFTRRDWTAMPVNYVWIGDGHGMKLKCAHPIHGRPFSPEVTFVIDGGTRFVVGWSLDLAENVFAVAGAIQHGIRNHGKPFLYYSDNGSGETADMLDKEVVGILPRLGIKHPTGIAGNPQGRGIIERLNRTLPMRIARRYRTYFGKGADRESLRVLNRDLRSAFNALQQDKPLNDRQKAAMRELPSWAELIEAIREGVEWYNNRPHSELPMKPNGRHYSPTEFRKKRQAEEDTEIEWLSDLELRDMFRPMVERPVRRCEIQWLNNIYYAPELRDEHGRKVLISYDIHDAERITVRRKDGSFICEAIWNGNKRAAFAVSAEYHKQQQRIKGMRKRAEEKIRDAEDEGIQILEHKQAEPWLSNVYRPVGNVVAVQQPEYEEEHDEEFERDFRLGMQKLFAMQEEDDPLA
complement(2150890..2151141)       PHAGE_Haemop_SuMu_NC_019455: Mu-like prophage FluMu DNA-binding protein Ner; BS653_12010; phage(gi418489037)     6.16e-12            Shigellaflexneri4cMRQREDSDRDWPSLKIQLALKDNGWSSFRELSLHAGYAQDSLKAVVRTPNKKYERVISDAIGVPPEIIWPSRYRNDGFIRKAS

#### region 12 ####
3830830..3831834                   PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; BS653_20860; phage(gi15834405)     0.0                 Shigellaflexneri4cMRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
3831916..3832113                   DUF2065 domain-containing protein; BS653_20865                                       N/A                 Shigellaflexneri4cMNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYMLRKTIG
3832217..3833515                   PHAGE_Mycoba_Sebata_NC_041993: hinge connector of long tail fiber proximal connector; BS653_20870; phage(gi100264)     4.52e-23            Shigellaflexneri4cMGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPAELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA
3833720..3834145                   transcriptional regulator; BS653_20875                                               N/A                 Shigellaflexneri4cMQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE
3834184..3836625                   PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; BS653_20880; phage(gi115304286)     1.01e-78            Shigellaflexneri4cMSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRCQVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE
3836805..3837536                   23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; BS653_20885                  N/A                 Shigellaflexneri4cMSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS
3837637..3838334                   PHAGE_Entero_P1_NC_005856: InsA; BS653_20890; phage(gi46401643)                      7.01e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWYGSHCRSQNRWSCMTRSSGIITNTISAA
3838336..3838590                   DUF350 domain-containing protein; BS653_20895                                        N/A                 Shigellaflexneri4cMESLPTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW
3838600..3839238                   PHAGE_Citrob_Moon_NC_027331: putative lipoprotein; BS653_20900; phage(gi849248649)     2.19e-09            Shigellaflexneri4cMARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRNTSGDYSWRFGSGKKESYSSGGFTTRKASTVSRGGYGRSSSARGHWGG
3839241..3840404                   PHAGE_Ralsto_RSL1_NC_010811: glutathionylspermidine synthase; BS653_20905; phage(gi189426829)     4.85e-94            Shigellaflexneri4cMLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSRELFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKSQIAAGESYVRKPIYSREGGNVTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG

#### region 13 ####
4164854..4166127                   PROPHAGE_Escher_CFT073: transposase insC; BS653_22550; phage(gi26249447)             1.48e-64            Shigellaflexneri4cVIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGEASAVVSGCRVRSCTSFSDEPMTGWMAAAVVTLMIRMCFSVYTMLSESCPRMVIVGYGRCFADRQNLMVCLRSMPNVFTGSCARMRCCLSENLLYRHRNGHIQAEWPKKAISDGALTGSSSAVITERDCVSRSRWTAVIVRHCTGRGLPAASTVKQYRTSCWERWNAASATIFRRLQWSGRIMVHATGLMKHASSPGCWDLNRRTRRCGVRRVTEQRASKRSVTTSVSCPNQTGRQQRTLQRRSSIITNGIRIVRWVIARHGNICGSGLVMGVITDVWKYAG
complement(4166184..4166471)       hypothetical protein; BS653_22555                                                    N/A                 Shigellaflexneri4cMDEEYRKDLQLWFGLTHASFCVMPRVFMEAMPPEWQEKMAQLLFEYSDTIKTDVCGVHSCFVTAKDGNNRFMRMPEDILNYRHPRREFIESFLKK
4166470..4166568                   pyrimidine monooxygenase; BS653_22560                                                N/A                 Shigellaflexneri4cIVLKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
4166549..4167717                   PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; BS653_22565; phage(gi24373865)       4.02e-10            Shigellaflexneri4cMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWGKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSERIILWSHSAMCSGFIAAATDTGKTVLKNQTADGLYYAVRYLSYMASATVRPEQEASPQWQPGEATRWDAGLLAGSKSWGWSAVSSRLTGINVVVMNMLLSLTTLKGSSPPNQIRCGAVMPISGRVSAGRTSPLFSTCSQENQWAGPCRSRRTAGSPKRWKWHGKPVVSPAGCSTAIRAVIIRAGSSGSYCGDTRSDRVAGAETAGITAQWNASSGVRTNGCRWWVTASARQLTPRTISLDITVHDRTNITVGYPQTNRKIDTGKTLTRWPVFVGA
4167711..4168766                   PHAGE_Entero_IME10_NC_019501: terminase large subunit; BS653_22570; phage(gi422934280)     0.0                 Shigellaflexneri4cMLTTSPFFPNLVDHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPIARRT
4168767..4170932                   PHAGE_Entero_IME10_NC_019501: portal protein; BS653_22575; phage(gi422934281)        0.0                 Shigellaflexneri4cMADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVRPEVRKLVAEMRRNPVDVLFRPKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDANSKQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWVSNDVVYVAEYYEVEEEKEKVFIYRDPLTGEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVVRLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQANAYMLEAATNAVKEVASLGVDAQAANGQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLTLEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLDGKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQNQLNAAKIAEIFNNMDLDKQAELREYLRLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETPQ
4170946..4171857                   PHAGE_Entero_IME10_NC_019501: scaffolding protein; BS653_22580; phage(gi422934282)     0.0                 Shigellaflexneri4cMDQTTDIQASEELTLPGNHAAASADGLVVDNANDSAGQEEGFEIVRKDDEKPKQDPATNAEFARRRIERKRQRELEQQMEAVKRGELPEHLRVNPELPKQPDPNDYLSEDALAKYDYDQSRALAAFQQANSEWQIKAMDARSQAVAEQGRKTQEFTQQSAQYVEAARKHYEAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKTRQLLAMDGQSALIELTRLSERLTLKPRAKPVSEAPLPDEPIQGHAVAANISAIEKQMEAAANKGDVETYRKLKAQLNKGIR
4171857..4173152                   PHAGE_Entero_IME10_NC_019501: coat protein; BS653_22585; phage(gi422934283)          0.0                 Shigellaflexneri4cMALNEGQLVTYALDEIIGTVQNLTPMASKVTKYPPPAESMQRSSNTVWMPVEQEAPTQTGWDLTGNATGILELSVKCNMGDPDNDFFELRADDLRDERSYRRRIQASAKKLANNIESAIAKQATEMGSLVVHDTRAIGPSTGLPGWDFVSDAERLMFSRELNRDMGISYFLNPDDYRKAGRNLVDGDIFGRVPEEAYRNGTIQRQIAGFDEILRSPKLPAVTKSTATGVTVSGAQKFKPQAYTLDTDGNKENVDNRVATVTVSSTTGFKRGDKISFIGVKFLSQMAKNVLTDDATFSITRVIDGTHIEITPKPIALDDASLTKEEKAYANVNTSLADTTPVNVLNVATTTANVFWADDSIRLLSQPIPVTHELFAGMKTSSFSIPGIGVNGIFATQGDINTLSGKCRIAVWYSACAVRPEAIGVGLPNQTA
4173197..4173427                   PHAGE_Salmon_SPN9CC_NC_017985: hypothetical protein; BS653_22590; phage(gi389060541)     5.88e-06            Shigellaflexneri4cMTHMIFRHGDMKKWKGVGYDFEIVKAEELQEYLDAGWFSHPDDLLKDVAEPEPEEKQRKKPGRKPKAAADEPDNEG
4173405..4173905                   PHAGE_Entero_IME10_NC_019501: DNA stabilization protein; BS653_22595; phage(gi422934284)     3.28e-122           Shigellaflexneri4cMNLTTKGDLVLAALRKLGVASNATLTDVEPQSMEDGVNDLEMMMAEWLGGDASPGINVGYIFADADVAPDPGDEHGLSNNAINAVIFNLACRIAPDYALEASAKLITTARYGKERLVKLSAMDRAKAAKCKSGYPNRMPVGSGNQLAKWNGWNYFHRKEPCDNGSE
4173905..4175323                   PHAGE_Entero_IME10_NC_019501: DNA stabilization protein; BS653_22600; phage(gi422934285)     0.0                 Shigellaflexneri4cMPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIDSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSIANGPQWCVLKTGLYDDVYRAIDFVYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARVFDLEVESSTGVAQYADRLFLSATTDCINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGAQIRIE
4175323..4176171                   PHAGE_Entero_UAB_Phi20_NC_031019: membrane-associated initiation of head vertex; BS653_22605; phage(gi100034)     2.48e-46            Shigellaflexneri4cMADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVILADHEQRISAAEATLVNHEERIRQAESTLQDHETRIAQNESDISSLDTRVQSLESQVSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGSLAPFFDTVNNKMVVFNENKTLLFKLSIVGTWPSGTANRSMQLTFSGSVPDTLVSSRNAATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ
4176171..4176626                   PHAGE_Entero_IME10_NC_019501: head assembly protein; BS653_22610; phage(gi422934287)     2.95e-110           Shigellaflexneri4cMITFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQPLTLDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR
4176629..4177321                   PHAGE_Entero_IME10_NC_019501: DNA transfer protein; BS653_22615; phage(gi422934288)     2.17e-158           Shigellaflexneri4cMLYAFKLGRKLRGEEPYCPEKGGKGGSSDKSAKYAAEAQKYAADLQNQQWQTIMKNLAPFTPLAEQYVNQLQNLSSLEGQGQALNQYYNSKQYKDLAGQARYQSLAAAEATGGLGSTATSNQLATIAPTLGQSWLSNQMSNYNNLANVGLGALQGQANAGQTYANNMSSIAQQSAALAAANANKPSSLQTAISGGTSGAIAGAGLASLLGTSTPWGAGIGAGIGLLGSLF
4177331..4178662                   PHAGE_Entero_IME10_NC_019501: gp20; BS653_22620; phage(gi422934289)                  0.0                 Shigellaflexneri4cMATWQGTNGGLLAGIGGVNSNAPSVNDIGNTLQLIRQNNDIERSGANNVGLTALQGLSGIAGVFQQEKQAQRQKEFQQAYANAYASGDRGALRQLATQYPDQIESVRKGMGFIDEEQRNSIGTLAAGARLASSSPEAMQSWLQNNAGELARVGVNPHDVAQMYQQNPRQFGEFVDHLGMNSLGPEKYFDLQDKMQGRQVTMRGQDLDSQTAARNQAITMRGQDIQANLGQQRINLDAETNRINNENKRLDRMLSAETNDLKRQEIQSRIAANNQQLQQKQQALNDGYKDGINTLTTSMFTLNDIVSSPSLKSITGLRGVIPNVPGSQAADTQARLDTFKSQAYLTAVQAMRGMGALSDAEGKKLDQAVGSLQNSQSEESFRRNAGVILNTLNQKRNEAVGKYVQQNGIKRVEAPQASIDYLKQHPELSIDFINRYGYLPSLGQ
4178663..4180393                   PHAGE_Entero_Sf101_NC_027398: transglycosylase; BS653_22625; phage(gi849122275)      0.0                 Shigellaflexneri4cMANYRDLLEQAGARYGVPEGLMTALGAKESSYNPAAVSSAGAVGLTQVMPGTWRDMGYTDEQMQNPEYQADAGARYLAKMYQQFGNWRDSLQAYHDGPGNVMKAKRGEYTPGPEGRGYVDDRFAQWAGDPVTDSTVEQRATSAKVHPQQDPNNPFAQLEVQSSEQVSASGVQSDPNNPFAQIEQQAASQQPPQPVSSVAPKPVQQQTVNQANNAPTREEPSLMQQAGDWLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGESIGGYLVPGAGVAGNMVIGSLADAANQRGDFAENAAINAGLSIATHGLINGVTRGVRGASNIISGNKTSAQRATTAPTETSPFSGDAAAATNPAVHAAEARVAQGVPMTPATKNPEEVVRTVAAQKRPNLASSLDELDINPQAEALESAERLNVDSLLPSHFSGNEQYKAVEQAIKSRAGSALQVQENEAIRQLAQGAGEIIDRVSGAKDALGMSDKFIDTVNGRMSALMKRSDQLYRNVEKAMPAGAKIDAPSTRSMLKQVAEDLGGMKNLDPIEKRVEVA
4180519..4181728                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfA protein of IS629; BS653_22630; phage(gi157166066)     8.16e-70            Shigellaflexneri4cMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKCHCWISCVSSTGADRYAANCILPRQRITTVSNSDIIRINAVPVRSAMTGRKRYSAYTMKITRYTVSLASVVTGMYQSGQMHCGTSHGGYGTCRCSPGKGPYDHQPESRCRRRPRKPSVRGRTTPAVGGFYLRQHMAGLRLCGVHHCVCRIHRGVAGLIVHGNDIRAGCTGAGVMGPSTVRHGPSQRFSVCIAGLHTAAGSRITGINRKYRRLVQRDGGEHQWSLQSGGNTPELEKPCRSGTGHTNVGGLVQSTIAGKAGPHPSGRSRKSLLCFHRKRSGSLA

#### region 14 ####
4235607..4235618                   attL                                                                                 N/A                 CATCCGGCAATA
4236854..4237551                   PHAGE_Entero_P1_NC_005856: InsA; BS653_22975; phage(gi46401643)                      6.64e-57            Shigellaflexneri4cVASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSRPRAYNRAVMLSALKWTNIGATSVLNHVSAGCFTRMTGYGGRLWRTSSVNALWPHWSVFACCRPLRSWYGRMAGRCMNHARESCTLSASVTLSALSDIIIDNIWQGWDGSHCRSQNRWSCMTRSSGIITNTISAA
4237742..4238845                   glutamate 5-kinase; BS653_22980                                                      N/A                 Shigellaflexneri4cMSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRRNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR
4238857..4240110                   gamma-glutamyl-phosphate reductase; BS653_22985                                      N/A                 Shigellaflexneri4cMLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESAEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALTQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA
4240225..4240300                   tRNA                                                                                 N/A                 GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA
4240255..4240318                   attL                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAATCAATAAGTTAC
complement(4240315..4241475)       PHAGE_Entero_HK446_NC_019714: integrase; BS653_22995; phage(gi428782218)             0.0                 Shigellaflexneri4cMSIKLRGGTWHCDFVAPDGSRVRRSLETSDKRQAQELHDRLKAEAWRVKNLGESPKKLFKEACIRWLREKSDKKSIDDDKSIISFWMLHFREAILSDITTEKIMEAVDGMENRRHRLNWEMSRDRCLRLGNPVPEYKPKLASKGTKTRHLAILRAILNMAVEWGWLDRAPKISTPRVKNGRIRWLTEEESKRLFAEIAPHFFPVVMFAITTGLRRSNVTDLEWSQVDLDKKMAWMHPDETKAGNAIGVPLNETACQILRKQQGLHKRWVFVHTKPAYRSDGTKTAAVRKMRTDSNKAWKGALKRAGISNFRFHDLRHTWASWLVQSGVSLLALKEMGGWETLEMVQRYAHLSAGHLTEHASKIDAIISRNGTNTAQEENVVYLNAR
complement(4241367..4241699)       PHAGE_Entero_HK446_NC_019714: excisionase; BS653_23000; phage(gi428782219)           1.83e-77            Shigellaflexneri4cVEEEIFTREEAASYLKVDKGTITQWIRSGRLQAAKINPDKPKSPYRICKSDCIAALKSVRHNSAVNAVDVQEVKACQSNYAVARGTAISSRQMDQELDALLKHRTKGKRKN
complement(4241790..4242134)       PHAGE_Entero_c_1_NC_019706: hypothetical protein; BS653_23005; phage(gi428781761)     8.82e-80            Shigellaflexneri4cMSDLAMKVLKWQSTGDVGISSATLASIACGLKKNIYGHHFGAPHDAADFRRCVALVEQIPEIRDSFDKVAKRVPAFKGILNEWDSLVDLLKSEMKIHGNKAPETYRRISELRKD
complement(4242235..4242414)       PHAGE_Entero_HK629_NC_019711: hypothetical protein; BS653_23010; phage(gi428782043)     1.88e-36            Shigellaflexneri4cMSCPKCGSGNIAKEKTMRGWSGDYVCCDCGYNDSKDAFGERGKNEFVKINKEREGNEKS
complement(4242511..4243185)       PHAGE_Entero_HK629_NC_019711: hypothetical protein; BS653_23015; phage(gi428782044)     7.30e-47            Shigellaflexneri4cMSTITREWLQQAINDYESVRDELPFGLDDYQGNILAALRIALASLEAEPIGAFHIAEQQVDGTSDYIKDGEWPIDNGIIEVYAAPPVPVVPAALPENDDEDGHDIDYLEPSEVYALGRTAGWNACRAAMLQGKSEQPQNAQQNIPENIPGGNSPVTPDGWISCSDRMPEDTKMLLAFSQGEIVAAYWNWVANPIDYKKYRAFTYLSGYILDDVTHWMPLPEPPL
complement(4243182..4243754)       PHAGE_Entero_HK140_NC_019710: hypothetical protein; BS653_23020; phage(gi428781974)     2.27e-74            Shigellaflexneri4cMSEINYQALREAAEKATKGQWAVEFDDEIYSTDGVNHEQIAMVFSENESRDAAFIAAANPATVLALLDELERNQQYIKSRDQENEEIALTVGKLRVELEAAEALNKHLELAIRKADGCSEALRRKTEAAEKRIAELEAREVVLPQCYSMLHRVDFDEPYHTEMVYRQHQVLEALHNAGINVTEACKGEAS
complement(4243751..4243918)       PHAGE_Shigel_Sf6_NC_005344: gene 23 protein; BS653_23025; phage(gi41057301)          8.97e-33            Shigellaflexneri4cMRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNAMWRKGGNQ
complement(4243935..4244249)       PHAGE_Entero_mEpX1_NC_019709: hypothetical protein; BS653_23030; phage(gi428781904)     1.22e-68            Shigellaflexneri4cMKKTPWEKWEVDFLREVAATMPVEVIAEKLERTEKAVMAKATRIGADIVSRLRGRRWTRAEVSLFGKFSAEEIAIATCRSIYSVRAMRYKLKKLDEERAGIRIN
complement(4244261..4244743)       PHAGE_Entero_HK140_NC_019710: hypothetical protein; BS653_23035; phage(gi428781979)     2.28e-108           Shigellaflexneri4cMSKLYEIANEYAKLMDSDLEPEMIADTIEGMEGEFTDKIEQLLAIIKNEYGYAERLKDEAKSLNERAAVIQNKIDSIMAYIASSLEMVGKKKIRAGIHQVTIRKPSETVEIIDSSALPPEYVEFETTIKADKLAIKHQLKAGINIPGAQLKVGKPSLLIK
complement(4244727..4245629)       PHAGE_Entero_mEpX1_NC_019709: RecT family recombination protein; BS653_23040; phage(gi428781906)     0.0                 Shigellaflexneri4cMSNIVEFVKQQEQLFCGALTEQTVTWAKESQFAIQYFQKNDYLAKTALANPTSAQNAIINVAAIGITLNPASKLAYLVPRDGMVCLDISYMGLLHLAQSTGSIKWGQCKLVYSNDTYESNGLDSAPTHKYNAFGERGSIVGGYCTVKTADGDYLTEEMSLAEIKAVEATSKAKNGPWKTFWEEMARKTIVKRASKYWPKAQRLDNAIHLLNEDEGMHQEPVMPHKSEEDIREDERKRQQEIMDKAQLLCDEMAQAENMDDLKRYFAEAYRLTSGMKLQQNVQAIYIECKAKLEVASEQTV
complement(4245626..4245934)       PHAGE_Entero_HK140_NC_019710: hypothetical protein; BS653_23045; phage(gi428781981)     4.19e-69            Shigellaflexneri4cMILTLNDKREISQIIASFTDDDYERINSEVDRLCKRCDPISEMLRSYKPDEHTKDAIDWLEDDDCNYQEKAAEWFWDAITERVKAEYAFAIFKRRHIFGEAA
complement(4246416..4246481)       PHAGE_Shigel_Sf6_NC_005344: gene 35 protein; BS653_23050; phage(gi41057313)          4.83e-07            Shigellaflexneri4cWTIRTTAMIARELGKQNNKAA
complement(4246874..4247266)       PHAGE_Entero_UAB_Phi20_NC_031019: DCMP deaminase; BS653_23055; phage(gi100074)       1.48e-41            Shigellaflexneri4cMNCSCNDSNQKISTWRITTKAISHEENIMTVIVYGKSTFAGNAKTRRHERRRKLAIERDAICNIIDSIFGTDSEEPVQEAPRKRLILSEKAISLGNIRNQNTDECSGSICLPNVALYAAGYRKSKQLTAR
4247181..4247385                   hypothetical protein; BS653_23060                                                    N/A                 Shigellaflexneri4cMIFSSCEMALVVMRQVLIFWLLSLQLQFTSPPNPSRLVSVCALSAPHRSRACQSVPFGFQLPADGIG
complement(4247536..4248189)       PHAGE_Stx2_II_NC_004914: CI protein; BS653_23065; phage(gi32171122)                  3.58e-157           Shigellaflexneri4cMKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLDEIGVVFKYLGIDNVSFNHDGTFSPVGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDCAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNDSCSVVGKVIASQWPEETFS
4248307..4248522                   PHAGE_Entero_VT2_Sakai_NC_000902: similar to C2 of bacteriophage L; BS653_23070; phage(gi9633420)     1.00e-47            Shigellaflexneri4cMSNLRKYRESLNISQTTLAKAVGCTQGAIGHWESGRRFPDLKTCRALVACLNKLGAKVSLDDVFPPEHKAA
4248632..4248928                   PHAGE_Entero_HK629_NC_019711: CII protein; BS653_23075; phage(gi428782059)           4.03e-65            Shigellaflexneri4cMEQTSYSKLSQRDVDRAETDLLINLSTLTQRGLAKMIGCHESKISRTDWRFIASVLCAFGMASDISPISRAFKYALDGLTNKKRPEATERSEQIQMEF
4249109..4249999                   PHAGE_Entero_IME10_NC_019501: gene O protein; BS653_23080; phage(gi422934271)        0.0                 Shigellaflexneri4cMGVVKLADYRHNPVQHQEASSMGYVSIHRQFMDSRLYKDSQAVHLWLHLILKANHESTVVNTDIGPITVDRGQMITGRPSLVRETFIPDNKVRSLLRTFESKGMLNICSMGKKFSLFTIVKYDDFQAKNCPTVVQRLSNANTSNGASLSGDCPTVVQRLSINNNINNISNTDVLESATADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGHGFTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR
4249974..4251425                   PHAGE_Entero_VT2_Sakai_NC_000902: similar to P protein of bacteriophage HK022; BS653_23085; phage(gi9633423)     0.0                 Shigellaflexneri4cMRVNTMTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPQSKKKGGF
4251425..4251523                   PHAGE_Entero_HK97_NC_002167: Gp56; BS653_23090; phage(gi9634202)                     7.57e-17            Shigellaflexneri4cMTIYITELITGAIYTVALFYWIKNEGDPDGHR
4251510..4251722                   PHAGE_Entero_HK446_NC_019714: hypothetical protein; BS653_23095; phage(gi428782240)     4.74e-47            Shigellaflexneri4cMDTVNGMCSDAPRAKKCKCGKSPTIFDMENGCQIYCANHAAVAAANYRSAVTEWNNLKSVREGSHEKTNL
4251685..4252143                   PHAGE_Entero_Sf101_NC_027398: NinB; BS653_23100; phage(gi849122309)                  2.14e-104           Shigellaflexneri4cMLEREVMKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARWGDRAA
4252140..4252313                   PHAGE_Entero_mEpX2_NC_019705: NinD protein; BS653_23105; phage(gi428765664)          3.11e-35            Shigellaflexneri4cMMRCYRCGECKEDNRFRPNQPYWNRWCLRCERTPTGVLPLPQEKEDVWRDSDEVLLK
4252280..4252456                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: NinE; BS653_23110; phage(gi399498848)           1.63e-26            Shigellaflexneri4cMARQRRSITQIALDNLIFTPTKRTKSRKKPIPTESQVKTFDYVYGLLQAKWNRMRKTR
4252453..4252623                   PHAGE_Entero_mEp235_NC_019708: NinF protein; BS653_23115; phage(gi428781860)         1.76e-34            Shigellaflexneri4cMIDPNRSYEQESVERALTCANCGQKLHVLEVHVCSDCCAELMSDPNSSMYEEEDDE
4252616..4253338                   PHAGE_Entero_HK633_NC_019719: DNA-binding protein; BS653_23120; phage(gi428782577)     2.91e-175           Shigellaflexneri4cMNELINGNAIKMTSIEIAELVGKRHDNVKRTIETLAKNGVIRLPQIEVSERINNLGFSVQYEHYVFEGEQGKRDSIVVVAQLSPEFTARLVDRWRELEETAVNIPKTLPEALRLAADLAEQKMQLENQLAIAAPKVEFADRVGEASGILIGNFAKVVGIGPNKLFAWMRDHKILIASGSRRNVPMQEYMDRGYFTVKETAVNTNHGIQISFTTKITGRGQQWLTRKLLDNGMLKVTGEAA
4253338..4253628                   PHAGE_Entero_mEpX1_NC_019709: hypothetical protein; BS653_23125; phage(gi428781926)     8.13e-67            Shigellaflexneri4cMANLRKEARGRECQVRIYGVCNGNPETTVLAHYRMAGICGTGMKPDDLIGAWACSDCHAEIDRRTHNLDNKDARLYHLEGVIRTQAILLKEGKIKP
4253625..4253987                   PHAGE_Entero_HK542_NC_019769: Holliday-junction resolvase; BS653_23130; phage(gi428783393)     1.57e-81            Shigellaflexneri4cMNEYQFALPYPPSVNTYWRRRGSQYYISDKGQKYRKDVQQIIRQLKLDIFTKSRLRIKVIADVPDSRRRDLDNILKGLLDSLIHAGFAEDDEQFDDIRVIRGVKVPGGRLGIKITELENV
4253984..4254172                   PHAGE_Entero_HK629_NC_019711: NinH protein; BS653_23135; phage(gi428782071)          2.32e-38            Shigellaflexneri4cMNSTIQTIPELLIQTRGNQTEVARMLSCARGTVLKYNRDSKGERHVIVNGVLMVKQGKRGRR
4254169..4254687                   PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; BS653_23140; phage(gi100037)     3.10e-126           Shigellaflexneri4cMSIRELNLTKEQHDWLNGWLELWGAWVYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMYIDKKAFGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHIAVKSLDMQLSI
4255186..4255509                   PHAGE_Entero_IME10_NC_019501: holin; BS653_23145; phage(gi422934276)                 3.76e-72            Shigellaflexneri4cMKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRDLLDFAGLSSNLAYITSVFIGYIGTDSIGSLIKRFAAKKAGVEDGGNQ
4255493..4255969                   PHAGE_Entero_c_1_NC_019706: lysozyme; BS653_23150; phage(gi428781798)                1.30e-115           Shigellaflexneri4cMVEINNQRKAFLDMLAWSEGTDNGRQKTRNHGYDVIVGGELFTDYSDHPRKLVTLNPKLKSTAAGRYQLLSRWWDAYRKQLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVREIEV
4256104..4256543                   PHAGE_Entero_Sf101_NC_027398: Rz (i-spanin); BS653_23155; phage(gi849122322)         2.52e-65            Shigellaflexneri4cMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGASSMGDGESPRLTADAELNYYRLRSGIDRITAQVNYLQEYIRTQCLRRFYSSSFTSGSVDRVMITSGVNPDTSHCCLILSIWRAVRGCVGA
4256748..4257233                   PHAGE_Salmon_g341c_NC_013059: hypothetical protein; BS653_23160; phage(gi255252747)     4.70e-117           Shigellaflexneri4cMNNFVEITSRIGRMYQDFLISGKGSGDIIEEIDKLSAELRRNGCVNSIFFETLLKQGFMFDMINYNKVAPSASQKSYVYVLHAEDSGLTKIGFSRRVNKRISEISRMSGGKLNLIAKIPADRELETKLHQKYYNYRSHGEWFSLNRCHLKELKEMPGNELK
4257482..4257724                   PHAGE_Entero_Sf101_NC_027398: hypothetical protein; BS653_23165; phage(gi849122327)     3.65e-52            Shigellaflexneri4cMAEIIPMTEEQKFQLEIYKLVMNQNAAAEEAFQFIGTDELKLELFKIHFQSGGANSDITTRTIEAVRKSKEALDLFTTGA
4257726..4257905                   PHAGE_Salmon_HK620_NC_002730: hypothetical protein; BS653_23170; phage(gi13559864)     1.32e-34            Shigellaflexneri4cMSRVINLGKEKKFPITQELYERLESVIHDYDGEISLCEAIGTLELLKQSLIEGAKESLT
4257929..4258417                   PHAGE_Entero_IME10_NC_019501: terminase small subunit; BS653_23175; phage(gi422934279)     9.82e-119           Shigellaflexneri4cMAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWADDNPLWEGKVFSYQGEIIKANVPKMRAMTISGLCTFLDITRQTWGTFRSMEGFSDVTSRAEDIIYDQKFSGAAADLLNANIIARDLGLKEQSQVEDVTPDKGDRDKRRSRIKELFNRGTGRDS
4258395..4259894                   PHAGE_Entero_IME10_NC_019501: terminase large subunit; BS653_23180; phage(gi422934280)     0.0                 Shigellaflexneri4cMELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDIKKPKEKKIPAPIRPIARRT
4259895..4262060                   PHAGE_Entero_IME10_NC_019501: portal protein; BS653_23185; phage(gi422934281)        0.0                 Shigellaflexneri4cMADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVRPVVRKLVAEMRRNPIDVLFRPKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDANSKQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWVSNDVVYVAEYYEVEEKKEKVFIYRDPLTGEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVVRLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNKTDENGNDLPIGPISYMENPEVPQANAYMLEAATNAVKEVASLGVDAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLTLEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYIGVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLDGKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQNQLNAAKIAEIFNNMDLDKQAELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETPQ
4262074..4262985                   PHAGE_Entero_IME10_NC_019501: scaffolding protein; BS653_23190; phage(gi422934282)     0.0                 Shigellaflexneri4cMDQTTDIQASEELTLPGNHAVASADGLVVDNANDNAGQEEGFEIVLKDDEKPKQDPATNAEFARRRIERKRQRELEQQMEAVKRGELPEHLRVNPELPKQPDPNDYLSEDALAKYDYDQSRALAAFQQANSEWQIKAMDARSQAVAEQGRKTQEFTQQSAQYVEAARKHYDAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKTRQLLAMDGQSALIELTRLSERLTLKPRAKPVSEAPLPDEPIQGHAVAANISAIEKQMEAAANKGDVETYRKLKAQLNKGIR
4262985..4264283                   PHAGE_Entero_IME10_NC_019501: coat protein; BS653_23195; phage(gi422934283)          0.0                 Shigellaflexneri4cMALKEGQLVTYAIDEIIETVQNLTPMASKVTKYTPPAESMQRSSNTVWMPVEQEAPTQTGWDLTGKASGILELSVKCNMGDPDNDFFELRADDLRDERSYRRRIQASARKLANNIESAIAKQATEMGSLVVHDTRSIGPSSTDLSGWDFVSDAERLMFSRELNRDMGISYFMNPDDYRKSGRNLVDGDIFGRVPEEAYRNGTIQRQIAGFDEILRSPKLPAVTKSTATGVTVTGAQKFKPQAYTLDTDGNKENVDNRVATVTVSSTAGFNRGDKISFTGVKFLSQMAKNVLTDDATFSITRVIDGTHIEITPKPIALDDESLTKEEKAYANVNTSLAASTTVNVLNVATTTANVFWADDSIRLLSQPIPVTHELFAGMKTSSFSIPGIGVNGIFATQGDINTLSGKCRIAVWYSACAVRPEAIGVGLPNQTA
4264328..4264576                   PHAGE_Salmon_SPN9CC_NC_017985: hypothetical protein; BS653_23200; phage(gi389060541)     4.31e-05            Shigellaflexneri4cMTHMIFRHGDMKKWKGVGYDFEIVKAEELQEYLDAGWFSHPDDLLKDVAKPEPEPEPEPEEKQRKKPGRKPKAASDEPDNEG
4264554..4265054                   PHAGE_Entero_IME10_NC_019501: DNA stabilization protein; BS653_23205; phage(gi422934284)     3.28e-122           Shigellaflexneri4cMNLTTKGDLVLAALRKLGVASNATLTDVEPQSMEDGVNDLEMMMAEWLGGDASPGINVGYIFADADVAPDPGDEHGLSNNAINAVIFNLACRIAPDYALEASAKLITTARYGKERLVKLSAMDRAKAAKCKSGYPNRMPVGSGNQLAKWNGWNYFHRKEPCDNGSE
4265054..4266472                   PHAGE_Entero_IME10_NC_019501: DNA stabilization protein; BS653_23210; phage(gi422934285)     0.0                 Shigellaflexneri4cMPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEHNMAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARVFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGCQIRIE
4266472..4267320                   PHAGE_Entero_UAB_Phi20_NC_031019: membrane-associated initiation of head vertex; BS653_23215; phage(gi100034)     5.71e-48            Shigellaflexneri4cMADSNLNTPVIVQATRLDTSILPRNIFSQSYLLYVIAQSTDVGNVASKANEAGQGAYDAQVRNDEQDVILVDHEIRLASAEAKIQDHETRITNAEAAIVGLDSRLTTAENDIDYLTDEVVSIQNTLSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVGTWPSGTANRSMQLTFSGSVPDTLVSSRNAATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATIIKIIAEQ
4267320..4267775                   PHAGE_Entero_IME10_NC_019501: head assembly protein; BS653_23220; phage(gi422934287)     2.35e-109           Shigellaflexneri4cMIQFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQPLTFDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLNRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR
4267778..4268470                   PHAGE_Entero_IME10_NC_019501: DNA transfer protein; BS653_23225; phage(gi422934288)     6.65e-159           Shigellaflexneri4cMLYAFKLGRKLRGEEPYCPEKGGKGGSSDKSAKYAAEAQKYAADLQNQQWQTIMKNLAPFTPLAEQYVNQLQNLSSLEGQGQALNQYYNSQQYKDLAGQARYQSLAAAEATGGLGSTATSNQLATIAPTLGQSWLSNQMSNYNNLANVGLGALQGQANAGQTYANNMSSIAQQSAALAAANANKPSSLQTAISGGTSGAIAGAGLASLLGTSTPWGAGIGAGIGLLGSLF
4268480..4269907                   PHAGE_Entero_ST104_NC_005841: gp20; BS653_23230; phage(gi46358708)                   0.0                 Shigellaflexneri4cMATWQGTNGGLLAGIGGVNSNAPSVNDIGNTLQLIRQNNDIERSGANNVGLTALQGLSGIAGVFQQEKQAQRQKEFQQAYANAYASGDRGALRQLATQYPDQIESVRKGMGFIDEEQRNSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNSVAQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMAGRDIERGELAETIRSNKAGEGLQAQSIAVSRENSLRTAGGAVPASVKEYQYFNSLSPEQQKTYLRVRGRPDAGGENVVQLADGRTVTVGGKLHGAGANAFYEGIDNEGNMVRVPASSIAAPATSSASAQNYAMKKDIDAIANADASALDFMTGMTGGAGNPAIGADVRSRLTGKEQRQLYNSAQRIQGRMQNQGVAAARDMGASGINTVAEAKMYFQGMPQVDYSSPEAMQQSIREIQEYTNNYNQQYNVNVGKSQRQQSQPAQVSQPAASSNFSSLWGD
4269907..4271904                   PHAGE_Shigel_Sf6_NC_005344: gene 13 protein; BS653_23235; phage(gi41057291)          0.0                 Shigellaflexneri4cMAKAWKDVIASPQYQALAPEQKAQAQEQYFNEVVAPQAGENAEQAKQAFYAAYPLPSVQPVETQQPVAQQQPQQSGFMSDLGEAVKETGRGLVQAGVNVANIPASVADAVTSAAAWAGGKLGIGDGTYQPAPRVTTQGLEQDFGLQQGALTPQTTEGRVFAEALPYLTPAGVERAAAQAPTLAGRIAQGATRLLAENAVGSLAANSAKDDAEALATDLGVGVLAGGAINAAGRGLGAAYRGVRGAIAPEAQQAIRFAEREGVPLHTTDLLQPTSRVGKMAQTTAENIPLAGTSGMRATQQEARSQLVQRFADKFGEYDPAVVIDSLKAKTSGIRRAAGNRLEQVQNAMAGINIQPARAIQQIDTEISNLQKLGKVADNETISKLQSYRDELIRNAGPDGPVNLDLKQLSDLRSQFRMDVKGERPVLPNRSDAAIQRVYKAMTDDINGAIGQNLGNDTLRKYQQANAVYADEAAKLKNTRLKNVLMKGDLTPEVVNNMLFSKNKSEIKTLYNSVGRVGRVQMRNGIIGKAMEKSGGSPDQFLRQLNILQNQTGITFKGQDAAYLKGLKNYLQSTQQAAKAAVTTPTGQQTIPFIIGYGTAMNPATTGAAVSYGLLTRAYESEPFRNAMLRMANTPRGSTAFEKAMQQAQKAINALTQGAKSDALSE
complement(4271994..4272254)       PHAGE_Entero_Sf101_NC_027398: putative chromosome segregation ATPase; BS653_23240; phage(gi849122276)     2.23e-53            Shigellaflexneri4cMYSKYDEAQFHLRLPHELHAKIKQRAKMNNRSLNSEIIAAIEESLDKQNSASVYIDDAERMAEQQSDMVKKIVFDTLKELYKKDSS
complement(4272386..4272895)       PHAGE_Klebsi_KLPN1_NC_028760: HNH endonuclease; BS653_23245; phage(gi971740839)      2.70e-40            Shigellaflexneri4cMNWNEVFVLKDDGLLYWSDQYLSRPKMFNISKEKPAGHIFKDKNRKTSYIIIRYQDKIYAAHRIIWEMFYGEIPSGMQIDHKDGNGLNNSIDNLRLVSLGENLKNKSKYTNNTSGCAGVSWHKTHKKWVAYISDAGKRINLGYFKSLDDAIAVRREAEKTYGYHENHGR
4272983..4273357                   PHAGE_Entero_Sf101_NC_027398: bifunctional tail protein; BS653_23250; phage(gi849122277)     2.93e-75            Shigellaflexneri4cMTDSINANVVVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGYHVPVSQPIIINAAGYPVYNGQIAKFVTEQGHSMAVYDAYGSQQFYFPNLLKYDPEQLLQLLQSDEGA
4274075..4274699                   phage tail protein; BS653_23255                                                      N/A                 Shigellaflexneri4cLVLNNPYFEANAGGGRPCYRYWDAPCNCGYKRWKFSSREQCKIHAHYSSNKLRWGKSYSHTQRHNVPERRGLSAKCRSTILDNRSLRGSHWVCFYRNNQGNIGFCIVSHTLGKNRQWYRRCYWCFIGRGCYRCVGLFSSARSSCRLYCADNTYICAFSLCYLYWRRYIGDPAQYARSRNLQFVCIHYQATIA
complement(4274753..4276031)       PHAGE_Entero_SfV_NC_003444: serotype-specific glucosyl transferase; BS653_23260; phage(gi19549011)     9.47e-67            Shigellaflexneri4cMKIFIMRNWHKISIFILAFTLIWLRRIDILTNAQFWAEDAVFWYKDAYEQGFFSSLITPRNGYFQTVSTLIVGATTFINPIYAPLLSNFFGIIIRAIIIWFLFTDRFKFLSTTSKIFISVYLICMPGLDEVQANITNAHWYLSLYVAMIIISEESKSKLWKAHDLFFIVLSGLSGPFIIFIIASSVFKYLHLSKGVISIRGLYLFYTRLPYLAMILCGLIQATSIILTFNGTRSHAPLGFSFDVMSSIISSNVFLFSFVPWNIANAGWDNHLLSYTLSTLVITLCVFIYIKGNWQMKVFATLPILIVAFSMAKPQLADSVPQLPTLATGNGSRYFVNIHIAIFSLICVCLFQCIKNKTLKIFFKIYVSVILIAMIKLNFFITPLPDMNWSQGAELINKAKHGEAVSFTVLPPWLTLDLIKKNFTLA
complement(4276044..4276961)       PHAGE_Entero_SfI_NC_027339: bactoprenol glucosyl transferase; BS653_23265; phage(gi849250309)     0.0                 Shigellaflexneri4cMKISLVVPVFNEEEAIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHTTGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRTERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTIVFGNPVRGYPSMLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPRYLIKSRK
complement(4276958..4277320)       PHAGE_Entero_SfV_NC_003444: putative flippase; BS653_23270; phage(gi19549013)        1.43e-74            Shigellaflexneri4cMLKLFAKYTSIGVLNTLIHWVVFGVCIYAAHTNQAMANFAGFVVAVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWVADRCSLPPIVTLVTFSAISLVCGFVYSKFIVFRDAK
4277610..4277673                   attR                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAATCAATAAGTTAC
complement(4277670..4278134)       PHAGE_Shigel_SfII_NC_021857: integrase; BS653_23275; phage(gi526244664)              1.01e-104           Shigellaflexneri4cMPVHLKESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDLILNPSVPNLSQSRNKEGTNDV
complement(4278161..4279359)       PROPHAGE_Xantho_33913: ISxac3 transposase; BS653_23280; phage(gi21231087)            1.29e-09            Shigellaflexneri4cMIWQPEFTDKTLSRKPGAVQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGSRRSWQRMASSLVVTDWHVFVRSGYAVSRNASSERLRTRTTICQLRQICTRRSLLQHQIRSGWRTRMLPHRRDGCTSLASKMFIRAKLSATPWESAQKSQVKPCLWRSGASAHLPGSTTLIEVHSTAHTITGSYRSSLVKHQCRVKVTVTTTLRWKASGERKMRAATIVLITGMKPSQYGNTLRFSTIVSVVTLVWGISPRQPSGKNIIRWLLAA
complement(4279343..4280551)       PROPHAGE_Escher_CFT073: transposase IS629; BS653_23285; phage(gi26250986)            7.79e-161           Shigellaflexneri4cMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGAVMEGSPPLNVSVKSRSVKIVNCAAVTISFAWLPLILQRRSSTASGKNDATAGAAAVRGRTAMQRTAYCPVNVLPLSATATSSGTQCPCAARLAEERDTARIRKSQGIRCKVWRQLLRECIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKAYYASIGNDDLAA
4280702..4281817                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; BS653_23290; phage(gi100150)     8.67e-25            Shigellaflexneri4cMFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMILCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVVYPLMFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA
4288531..4288542                   attR                                                                                 N/A                 CATCCGGCAATA
