gi|00000000|ref|CP021354.1|  Rhodococcus sp. S2-17 chromosome, complete genome. 6611769, gc%: 65.80%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
497540..498781                     PHAGE_Burkho_KS5_NC_015265: gp44; CBI38_02425; phage(gi327198042)                    3.62e-12            RhodococcusspS217MTRRRALSSAVARRLAAVATSGSWTRAAIAQRFEEIGTPDADRIATRLFDLLPTPPVEGVDSVYRLLSELPHIDEPAPVVEQPDHEWRFDVPKWTHTVAVAQAVGLTPAELDWFADPGEWLRNKAPTLQHYRYRIRSDHRLLEAPKERLREVQRRILTALLDRVPPHAAAHGFVRGRSVHTFAAPHAGRDMVVRIDLRAFFPSISQARVRAVFDSLGYPPRVSRVLTGLCTTSTPPDVLARLPFDTASRLRGSHLPQGAPTSPALANLVTYRLDRRLTGLARSSRAEYTRYADDLAFSGVDLAADRLISAVGRIAADEGFSVHPRKTRIMRAHRRQHLAGLVINSHAQVVRTEYDQLRALLFNSLRTGPDLQNRDGRSHFREYVYGRIAWIGESNPNRKRALLALADRIEWTG
498867..499151                     hypothetical protein; CBI38_02430                                                    N/A                 RhodococcusspS217MLYVALFGFILWVLCFADAITTEENEVRNLSKDGWLVVVLLLPIVGSILWLVAGRPEKYPGERLPEDPEEAEFVRRCRERAEEQRRENRRRPQE
complement(499176..499685)         polyketide cyclase; CBI38_02435                                                      N/A                 RhodococcusspS217MTSDTNETVPVRERLEVQRAIAAKPADIFSVLCDPNGHVAIDSSGMLMSAEGEPVTAAGDSVVVHMDRDALNDVDLGLYDVTVTIETFVPDREISWKVLGRIRPQIGHVYGYRLEPIEEGTMVTSFYDWSSIDPVWRDAGIFPVISDTALRATLGILARTVAPGLPRPL
complement(499793..500383)         PHAGE_Entero_phi92_NC_023693: Phi92_gp065; CBI38_02440; phage(gi726646998)           2.89e-32            RhodococcusspS217MEYRELTIPGAWEITPRQFGDDRGVFLEWFKGSEFEAAVGHRLDLAQANCSVSAAGVLRGIHFTDTPPGQAKYVTCVKGAFLDVIVDVRVGSPTFGQWDSVMIDDVDRRAVYLPAGLGHAILSLEDASTVMYLCSLEYTPELDHDVHPFDPELAIDWPAVGRDGSPLNFQLSGKDSAAPTLTQAAEAGVLPVYASS
complement(500385..501260)         PHAGE_Escher_phAPEC8_NC_020079: putative glucose-1-phosphate thymidylyltransferase; CBI38_02445; phage(gi448260372)     1.50e-117           RhodococcusspS217MRGIILAGGTGSRLHPITLGVSKQLVPVYDKPMIYYPLSTLMLANIRDILIITTPHDEEQFRRLLGDGSQFGVNLSYLVQKEPNGLAQAFVLGADHIGDQPVSLILGDNIFYGPGLGSRLNRFENIDGGAVFAYWVSDPSSYGVVEFDESGSATSIEEKPATPKSNYSIPGLYFYDNDVVAIARGLTPSDRGEYEITDVNQAYLQAGRLQVEVLPRGTAWLDTGTVDSLLEASNFVRTLEHRQGLKIGVPEEVAWRRGFITDTELAERAATLGKSGYGDYLLEILERGKDW
501324..502328                     PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; CBI38_02450; phage(gi100279)     8.09e-46            RhodococcusspS217MRLLVTGGAGFIGANFVHRTVAERPDVQVTVLDALTYAGNRRSLDPVADRIDFVHGDIADGALVNGLVAASDAVVHFAAESHNDNSLADPTPFLHTNVMGTFTLLEAVRAHDVRYHHISTDEVYGDLELDDPERFTESTAYNPSSPYSATKASSDMLVRAWTRSFGVRATLSNCSNNYGPYQHVEKFIPRQITNLIDGVRPRLYGSGRNVRDWIHVDDHNSAVWTILEKGSIGQTYLIGADGEVDNRTVVETLLELFGRDIDDLDFVTDRPGHDLRYAIDSTRLRTELGWTPQYADFRGGLEATVRWYRDNEPWWRAQKESAEKAYAATESVIG
complement(502394..503350)         PHAGE_Bacill_G_NC_023719: gp344; CBI38_02455; phage(gi593777800)                     1.03e-07            RhodococcusspS217MKDKYDVVIVGGGAAGLSGALALSRARRSVLVIDAGAPRNAPAGHIHNYLGRESTPPAELLDIGRGEVASYGGEVVTGTVTSAQTVEDDSFRVTLADGRSVSARRLLVTTGLVDELPDIPGVSERWGRDVLHCPYCHGWEVRDQPIGVLASSPFSVHQALMWRQWTDKVTLFLNDAIEPTGEEYEQLAARDISVVDGKLSGLTVAEDRLTGVRLHSGEEFACAAVVVAPVFTARADVLTTLGLEPVEQQMGGHVVGTYIASDATGATAIPGVWVAGNVADLKGQVIASAAAGLNAAAAVNTDLIAEDTRLAVAARAGR
503443..504048                     PHAGE_Burkho_KS5_NC_015265: gp45; CBI38_02460; phage(gi327198043)                    6.35e-07            RhodococcusspS217MSDDIPDLGGVLDAVGPRLKALRQQRGATLAQLSDATGISVSTLSRLESGQRKPTLELMLLLARAHQLPLDELVDAPATGDPRVHLRPIERFGTKIIPLTRRPGGIQAFKHVIPAREPSPSEPQLQVHEGYEWLYVLSGRLRLLLGEHDVILTAGEVAEFDTHVPHWFGNPGPEPVEILSLFGPQGERAHVRARPAGDAAL
504130..506004                     glycosyl transferase; CBI38_02465                                                    N/A                 RhodococcusspS217MDTANASVSDVELTEHRAVSDRLVAQRGPFTGTSPIVNDDLYAVVKRGGSTRTRFALHLHAGATVHTNTFFGRFPASYWQRWTTAAEVTATARIDAADHCRAQLLASDIGGHRRIIAAEVITGSGTVTLTAKLDKFADGGALWLQFDALEGGVTVADIEWTVASPETVRPVAIAICTFNRADDCANTVAALASDERVLSSLDAVYVVDQGTDPVETRELFQQVAPKFGDRLHYLRQANLGGAGGFSRGLYEASAAGPHADVLLMDDDVLCEPESVLRLSAFANMTTDPALIGAQMLFLYNPNYLLASGERADLTTLRRGLPTDKYGVRNSNVLKKLPERRIDAEYNGWWSCLIPAEVVRQIGMPLPVFFQWDDVEYSLRAGRAGIPTITLPSTGVWHADFYWKDVDGFAHYFSTRNGLITAALDPGFAPTSLAKQLSREISHSIVSLQYGLAHTQLRAIEGFLEGPNALADGGQAALAMINKERTRFPETITRPVSELPAGVRFRRADPPPKAGWDDLVLAKRAAAHLRGRLERGPVAISYEDARWWHVGRFDHVYVTDASQAGVRERKYDRELAAEMGGRLAGVMKRFRAEAPTVAEAFRAEMPTLTSRENWTRLYEMNQASS
complement(505996..506868)         PHAGE_Mycoba_Courthouse_NC_023690: gp15; CBI38_02470; phage(gi593774293)             9.00e-43            RhodococcusspS217MFEGFRRKARLKLQRAVYEVVAESDRRSRELHENQHDQTLAELSATNQELSRVLSELSDARMEVSDVQQRLGELEQQARRDITQALDVGATNQSAAFVLEHMPKAPVFWNPHDTLRYGLSQVQIPGMALEFGVASGTTLRIIAEQLKDAQHEVFGFDVFSGLPQTWRTGFPAGEFAQEKMPQVRGAQLVPGLFEDTLADFLDTHPDPVSFVHLDADLYSSTKTVLDRIGLRLVAGTVIVFDEFFNYPGWQEHEYRAWKEFVDRTEIGFEYLGYTANHEQVVVRITEPISR

#### region 2 ####
complement(3961890..3963680)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CBI38_18550; phage(gi526120183)     3.05e-13            RhodococcusspS217MTAVAPQPVPAIAAARPYPPRQGPKGSFIFKMITTTDPKVLGIMYLTTSIIFFLIGGLMALMMRAELAVPGMQFLSNEQFNQLFTMHGTIMLLLYATPIVFGFANYILPLQIGAPDVAFPRLNAFSYWLYLFGAIIATAGFITPGGAADFGWTAYTPLTSALHSPGVGADLWIMGLAVGGLGTILGGVNMITTVICLRAPGMTMFRMPIFTWNIFITSILILLAFPLLTAALLGLFVDRHLGGHIFDPATGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYSGLVYATIAIAALSIAVWAHHMYATGAVLLPYFSFMTFLIAVPTGVKIFNWIGTMWKGQLTFESPMLFSVGFLITFLFGGLSGVILASPPLDFHVTDSYFVVAHFHYVVFGTVVFATYAGIYFWFPKMTGRMMDERLGKWHFWTTFIGFHGTFLVQHWLGAEGMPRRYADYLPSDGFTMLNSFSTIFAFVLGASTLPFIWNVFKSYRYGEVVTVDDPWGYGNSLEWATTCPPPRHNFTELPRIRSERPAFELHYPHMVERMKAEAHVGPGHGGKHASTVLEEERHAPLTVSGEGEPGTDSGR
3963980..3964978                   iron siderophore-binding protein; CBI38_18555                                        N/A                 RhodococcusspS217MNILSRRRAVAAVVALAAAVAVTSCSSNDDASSTSDAAASAQFPRTVQHFRGNTEIPAAPQRVVALDNSFTDAVLLLETPLVGYVDYRDPGLPDYLGSTRDEYATEAESVGTVSTASLEKIAALQPDLIISAEVRDGKNYEQLSAIAPTIFTETTGPTWKENIRLVGQALGKEELANEKIAAYESRAAAVGSAINTKASNPVVSVIRFAGEPTARLYRTTSFSGIVLEDAGIARPASQGPDPADPTSIMQSISPELLSEADGNVIFVSTWQDPAGKSAEAARPFLESPLWQTLQGRKVDVDDARWMSPVSIQGAHLILDDLSDTFEVDKHSG
3965014..3966087                   transporter; CBI38_18560                                                             N/A                 RhodococcusspS217MSLRRFSTVRRASIGLVAGVAAFALAGCSQPADDDPASSIVRTTTKIAGAAVVGIERDTTTACPEPAPVDPELSGSTTHRVVHTTGTSEVPADPQRIVVLDSAALDAVCALGLWERVVGAATSGDGDSPQPGYLGTGISELPSVGPAGAPDVARIAQAAPDVILGSSPATGALYGELSPIAPTVFVGSDPVYWKTQFLLAGNALGRADAAAAALERYQADAKQLGIDIDAAQTQASIVRFDADSLEVEGPAAFAGQVLTDAGVRRPAYQNLDGAVTESIDDAELDRAEGDLIYAVLVGKDGTEHAEDVMSGQAWEDLGAAADSRVFAVEGEVWNGNGLVAARAVLTDLRNTLNGYAG
3966097..3966570                   PHAGE_Citrob_Margaery_NC_028755: baseplate wedge subunit and tail pin; CBI38_18565; phage(gi100182)     1.52e-05            RhodococcusspS217MPVPEFVAALRRHVGHAPLWLSGVSVVVRDDDGRLLLTRRADNGRWAVVSGVLEPGEEPGPAALREVREETGVDAELERITSVDVTGPITYPNGDVAQYLDVCFLARYVGGAAAVSDDENLEVAWFSPEEVPSDLTPSSRLRLEKALQDVPEAWFQR
complement(3966667..3967632)       PHAGE_Mycoba_PegLeg_NC_021299: NrdG; CBI38_18570; phage(gi508177953)                 0.0                 RhodococcusspS217MVKLVSRVSAINWNRVQDEKDAEVWDRLVGNFWLPEKVPVSNDIPSWGTLTAQEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDDAFRWSEENPNLQRKAEIVMDYYQGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLYDEVGLTEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYVIGKAVNTEDEDWDF
complement(3967710..3969893)       PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; CBI38_18575; phage(gi589890883)     0.0                 RhodococcusspS217MAPTITDTIDAGSVERDARGGDSTNGLDYHALNAMLNLYGPNGEIQFDKDVAAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDQYSRAFVKFLIDHAYSKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGDEDLATKLVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLTNVREHGAPIKRIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVPFADINVTEKYYEMVDDKRIRKSKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIEGKITHSNLCSEILQVSTPSLFNDDLSYSKVGKDISCNLGSLNIAKTMDSPDFARTIEVAIRGLTAVSDQTHIYSVPSIEEGNNDSHAIGLGQMNLHGYLARERIYYGSDEGIDFTNIYFYTVVFHALQASNRIAIERGTYFKGFPQSQYASGEYFDKYTDQVWEPKTDKVRQLFADSGVHIPTQDDWRELKASVQKHGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRKEGKIGRVYYPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML
complement(3969851..3970327)       PHAGE_Staphy_SPbeta_like_NC_029119: putative NrdI-like protein; CBI38_18580; phage(gi985761171)     3.72e-15            RhodococcusspS217MTSLVYFSSASENTHRFVQRLGVPATRIPIHDRDGTFEVHEPYVLILPTYGGGTTAMGRDTSYVPKPVIRFLNNPHNRSLIRAVIAAGNTNFGDSYCFAGNIISQKCHVPYLYRFELMGTAEDIERVKVGLGEFWEHLDDKEQELWRRPSQTPSMRGA
complement(3970416..3970649)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CBI38_18585; phage(gi589892251)     7.02e-31            RhodococcusspS217MSITVYTKPACVQCNATYRALDKEGIDYAVVDITEDAEARDYVMALGYLQAPVVVAGDEHWSGFRPDRIKTLSANAA

#### region 3 ####
6597884..6598855                   PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; CBI38_30450; phage(gi100233)     4.78e-06            RhodococcusspS217MKIAVTGGTGYVGAHTTLALLADGHTVRLLVLPHESIDVVVASAGDASARIEVVVGDIRDRTSIEQLLDGCDALLHGAGVVGTDDRREQLMWEVNAQATAAILVRAAFLGLDPIVHVASFSALFPSPDPVIGPDSPTAAGRSAYGRTKAAADRVARALQDAGAPVVITYPTSVVGPGLEGTKGVTEQGWAVLLGSGVAPRFRGGMQMIDVRDVAAVHAAVMQPGRGPRRYVCGGELIEFNHLIDILEHSSGRRLRRISLPGGVVRFLGRLADAVGKYTAVSAGFSYEAAWLLTSATATDDFRTRDELGLKWRPPRDALASTFA
6598892..6600079                   NADH:flavin oxidoreductase; CBI38_30455                                              N/A                 RhodococcusspS217MTTPTDRRTIWEPARLGPLTLRNRIMKAATFEGVMPRGQVTDKLVEFHAEVARGGAALTTVAYCAVSPGGRVHANTLVLDKASVPGLRRLTDAVHAEGALASAQIGHAGLVANTLSNRTKTLAPSTRLSPPAMGLVRGATHTELDQVVADFENAARAAVDAGFDAIEVHLGHNYLLSSFMSPNLNKRTDEYGGSLEKRAAFPRRVVEGIRRVVGDTIAVTAKFNMTDGVPKGLWLDESLRIARLLERDGHLDALQLTGGSSLLNGMYFFRGEVPMAEFVASQPKLVGYGLKLYGPRIFPTYPFEEAFFLPMARQFREALSMPLILLGGVNRLDTIDTALGEGFEFVAMARALLRDPDLVNKFRDQHVAEGLCIHCNKCMPTIYTGTRCVIRETLR
6600188..6601171                   PHAGE_Bacill_G_NC_023719: gp344; CBI38_30460; phage(gi593777800)                     7.36e-77            RhodococcusspS217MTTPSTVHELIIVGSGPAGYTAAVYAARAELEPLLFEGTQFGGALMTTTEVENFPGFRQGIMGPDLMDEMREQAKRFGADIRTEDVEELDLTGPIKKVVVGGETYQAHAVVLAMGAAARYLGIPGEEKLLGRGVSACATCDGFFFKDQDIVVVGGGDSAMEEATFLTRFARSVTVVHRREEFRASRIMLERAKSNEKIRFVTNAEPIEVLGENSVTGLVVRDTVTGEQSTLPVTGMFVAIGHDPRSELVKGQVEVDEAGYVRVQTPTTATSLDGVFAAGDLVDHTYRQAITAAGTGCSAAIDAERWLAERGDITANTIAAAGAPVDA
6601220..6601543                   PHAGE_Dinoro_DFL12phi1_NC_024367: putative host-like protein; CBI38_30465; phage(gi658311036)     2.98e-13            RhodococcusspS217MSNTVTITDDSFQQDVLGSDKPVLVDFWATWCGPCKMIAPVLEEIAGEHSDKLTIAKLDIDANPGAARDFQVMSIPTLILFKDGKPINTIVGTKGKAALLKELADVL
6601712..6602911                   PHAGE_Bacill_AR9_NC_031039: ss-DNA binding protein; CBI38_30470; phage(gi100271)     8.77e-16            RhodococcusspS217MHRLRHGDHGPAVAEIRGTLAGLGFLHDGVADTRRDTNNGSHWIAPDAVFDHHLDSAVRAFQQQRGLLVDGVVGPATYRSMKEASYRLGARTLIYQLSAPLYGDDVATLQTRLQDLGFYVGRVDGFFGPQTHESLSSFQREIGIAADGICGPATLRSLELLGTRVTGGSPHAMSEEEMVRSSGPQLSGKRIVIDPGLGGDTYGTIVHSPYGTISESDILWDLASRLEGRMAATGMETFLSRPHHANPSDIQRASTSNAFDADLMISLRCDSNSSPAANGVASFHFGNSHGSTSMIGQVLTGFIQREIVARTPLQDCRTHGRTWDLLRLTKMPTVQIDLGYLTNRSDAAVLSNPRARDAIAEAILISVKRLYLLGQDDQPTGTFTFAELLAEELSSSERS
complement(6602915..6603610)       hypothetical protein; CBI38_30475                                                    N/A                 RhodococcusspS217MSTHVTSLTLDGLDKLSAHARRCVFWEMDPAAIHSSRGFCDQEFEKEAWLSMVMLEWGSCGQVAVMDGKPVGSALYAPPRTVPRAQLLPTAPVGADAVLLTSLRLEPAGEEQNLGATLIQAVVADLVRRGVRALEAFGIRDGGSSDTDHSGIASATAAMECSPEECMIPAEFLEDNGFEIVAPHYRFPRLRLELNRDHGWKEDVEAALERLLHTASVSMVDIGERTPVGVR
complement(6603766..6604827)       PHAGE_Gordon_Nyceirae_NC_031004: hypothetical protein; CBI38_30480; phage(gi100046)     3.15e-08            RhodococcusspS217MSQTRKGGLGRGLAALIPTGPTTAPGLGTAAADVVIGTDKRHIPAPPTPNSSTSPSDSDRASASTGNNGDGKVTNGAEPVPSPTGAVYREIAPNLIVRNPKQPRQVFDDEALAELVHSIREFGLMQPIVVRPVEDGKFQLVMGERRWRAGQEAGLDTIPAIVRETGDDAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRNDDQIAPPQRRKPIQMPGLQDVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMMEAQRADS
complement(6604824..6605837)       PHAGE_Clostr_phiCD146_NC_028958: putative para; CBI38_30485; phage(gi971820185)      1.69e-13            RhodococcusspS217MSGGPESAVSRETVSRETEHRSDHATSSGNGDDGFTAPYNGISVEETPIGAAAHRASQVLHPHSVTLPKPPERRILTIANQKGGVGKTTSAVNLASALAVQGLTVLVIDLDPQGNASTALGVAHHSGIPSSYELLLGEVTAAEAIQTSPHNERLFCIPATIDLAGAEIELVSMVAREGRLKGALSEKALRDIDADFILIDCPPSLGLLTVNAMVAAKEVLIPIQCEYYALEGVGQLLRNIELVQAHLNPDLHVSTVLLTMYDGRTKLADQVAAEVRSHFGDAVLRAVIPRSVKVSEAPGYGMTVLDYDPGSRGAMSYLDAGRELAARTAQITKQEQR
