Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 8 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              26.4Kb                   questionable(70)              integrase,transposase                        71440-97922              0                        31                      25                               4                                93.5%                            2                                yes                              20                               PHAGE_Entero_HK022_NC_002166(3),PHAGE_Entero_SfV_NC_003444(3),PHAGE_Entero_cdtI_NC_009514(3),PHAGE_Entero_P22_NC_002371(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Sodali_phiSG1_NC_007902(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Salmon_HK620_NC_002730(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Pseudo_PS_1_NC_029066(2),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Vibrio_ICP1_NC_015157(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Paenib_Tripp_NC_028930(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Clostr_phiMMP03_NC_028959(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Lactob_CL1_NC_028888(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Vibrio_X29_NC_024369(1)   3                                9.67%                            43.23%                        
                                  2              22.8Kb                   intact(150)                   tail,plate,lysis,lysin,terminase,capsid,portal,integrase     310569-333445            1                        32                      27                               2                                90.6%                            3                                yes                              13                               PHAGE_Salmon_Fels_2_NC_010463(11),PHAGE_Erwini_ENT90_NC_019932(10),PHAGE_Salmon_RE_2010_NC_019488(10),PHAGE_Entero_PsP3_NC_005340(4),PHAGE_Salmon_SEN4_NC_029015(4),PHAGE_Salmon_SEN5_NC_028701(4),PHAGE_Entero_186_NC_001317(4),PHAGE_Escher_pro483_NC_028943(4),PHAGE_Salmon_SP_004_NC_021774(3),PHAGE_Yersin_L_413C_NC_004745(3),PHAGE_Entero_WPhi_NC_005056(3),PHAGE_Entero_fiAA91_ss_NC_022750(3),PHAGE_Salmon_SEN1_NC_029003(3),PHAGE_Entero_P2_NC_001895(3),PHAGE_Ralsto_RSA1_NC_009382(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Ralsto_RSY1_NC_025115(2),PHAGE_Burkho_KS14_NC_015273(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Acinet_YMC_13_01_C62_NC_024785(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Gordon_CaptainKirk2_NC_031072(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Acinet_YMC11/12/R2315_NC_028855(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Staphy_StauST398_5_NC_023500(1)   11                               34.37%                           48.44%                        
                                  3              26.5Kb                   intact(120)                   tail,transposase,terminase                   386018-412553            0                        31                      23                               4                                87%                              4                                no                               15                               PHAGE_Escher_HK639_NC_016158(5),PHAGE_Pseudo_PS_1_NC_029066(5),PHAGE_Entero_mEp235_NC_019708(3),PHAGE_Entero_HK022_NC_002166(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(2),PHAGE_Pseudo_YuA_NC_010116(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Sodali_phiSG1_NC_007902(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Cronob_ENT39118_NC_019934(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Pseudo_BS5_NC_031917(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Shewan_3/49_NC_025466(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Gordon_CaptainKirk2_NC_031072(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Pseudo_PAE1_NC_028980(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Staphy_StB27_NC_019914(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Edward_eiAU_183_NC_023555(1)   8                                16.12%                           48.23%                        
                                  4              14.6Kb                   intact(100)                   transposase,tail                             459921-474575            0                        12                      9                                1                                83.3%                            2                                no                               6                                PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_HK544_NC_019767(1)   2                                8.33%                            41.83%                        
                                  5              33.6Kb                   intact(150)                   integrase,transposase,tail,coat              530201-563810            1                        40                      27                               8                                87.5%                            5                                yes                              15                               PHAGE_Escher_HK639_NC_016158(8),PHAGE_Cronob_phiES15_NC_018454(6),PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Pseudo_PS_1_NC_029066(3),PHAGE_Escher_YD_2008.s_NC_027383(2),PHAGE_Sodali_phiSG1_NC_007902(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Entero_mEpX2_NC_019705(2),PHAGE_Edward_eiAU_183_NC_023555(2),PHAGE_Escher_Envy_NC_031081(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713(1),PHAGE_Tetras_TJE1_NC_019930(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Sodali_SO1_NC_013600(1),PHAGE_Citrob_Stevie_NC_027350(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Salmon_L13_NC_021317(1),PHAGE_Escher_HK578_NC_019724(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Clostr_phiCT19406B_NC_030947(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Entero_JL1_NC_019419(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Clostr_phiCT453B_NC_029004(1),PHAGE_Clostr_phiCTC2B_NC_030951(1),PHAGE_Pseudo_PaMx42_NC_028879(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Burkho_KL1_NC_018278(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Salmon_phSE_2_NC_031026(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Rhizob_vB_RglS_P106B_NC_023566(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1)   6                                20%                              45.62%                        
                                  6              8.5Kb                    questionable(70)              transposase,tail                             631472-639980            0                        11                      8                                2                                90.9%                            1                                no                               5                                PHAGE_Klebsi_KP36_NC_029099(1),PHAGE_Entero_vB_EcoS_NBD2_NC_031050(1),PHAGE_Entero_Phieco32_NC_010324(1),PHAGE_Shigel_pSf_1_NC_021331(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Klebsi_1513_NC_028786(1),PHAGE_Klebsi_Sushi_NC_028774(1),PHAGE_Escher_EB49_NC_023743(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Entero_fiAA91_ss_NC_022750(1)   3                                9.09%                            42.47%                        
                                  7              31.5Kb                   intact(150)                   integrase,transposase,head,terminase         656706-688219            0                        33                      21                               4                                75.7%                            8                                yes                              14                               PHAGE_Pseudo_PS_1_NC_029066(5),PHAGE_Escher_HK639_NC_016158(4),PHAGE_Entero_SfI_NC_027339(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Erwini_phiEt88_NC_015295(2),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Pseudo_PAE1_NC_028980(2),PHAGE_Pseudo_BS5_NC_031917(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Shewan_3/49_NC_025466(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Haemop_HP1_NC_001697(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Staphy_Twort_NC_007021(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Vibrio_X29_NC_024369(1)   7                                15.15%                           45.48%                        
                                  8              36.9Kb                   questionable(90)              tail,integrase,transposase                   698868-735847            0                        17                      13                               3                                94.1%                            1                                yes                              9                                PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_HK022_NC_002166(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Sodali_phiSG1_NC_007902(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Cronob_ENT39118_NC_019934(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Paenib_Harrison_NC_028746(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Pseudo_PS_1_NC_029066(1)   2                                17.64%                           44.57%                        
                                  9              10.4Kb                   questionable(80)              tail,transposase                             724562-734980            0                        13                      8                                1                                69.2%                            4                                no                               6                                PHAGE_Entero_HK022_NC_002166(3),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Cronob_ENT39118_NC_019934(2),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_36_NC_029071(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Escher_Tls_NC_009540(1),PHAGE_Salmon_phSE_2_NC_031026(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Klebsi_KLPN1_NC_028760(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK633_NC_019719(1)   3                                23.07%                           47.78%                        
                                  10             38.8Kb                   intact(130)                   protease,integrase,transposase,terminase     1137589-1176393          0                        41                      33                               6                                95.1%                            2                                yes                              24                               PHAGE_Salmon_HK620_NC_002730(4),PHAGE_Erwini_phiEt88_NC_015295(4),PHAGE_Entero_HK629_NC_019711(3),PHAGE_Sodali_phiSG1_NC_007902(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Escher_HK639_NC_016158(3),PHAGE_Entero_HK022_NC_002166(3),PHAGE_Entero_SfI_NC_027339(3),PHAGE_Pseudo_PS_1_NC_029066(3),PHAGE_Escher_PA2_NC_028449(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Prochl_P_SSM2_NC_006883(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Shewan_3/49_NC_025466(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Pseudo_BS5_NC_031917(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Paenib_Harrison_NC_028746(1),PHAGE_Hypert_2_NC_014321(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Bacill_phBC6A51_NC_004820(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Lactoc_BK5_T_NC_002796(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Clostr_c_st_NC_007581(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Synech_S_CAM1_NC_020837(1),PHAGE_Sulfol_SMV1_NC_023585(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Cellul_phi14:2_NC_021806(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Sinorh_phiLM21_NC_029046(1)   4                                9.75%                            44.99%                        
                                  11             13.2Kb                   incomplete(60)                integrase,transposase,terminase              1191649-1204944          0                        13                      7                                3                                76.9%                            3                                yes                              7                                PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_P4_NC_001609(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Sinorh_PBC5_NC_003324(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Pseudo_PS_1_NC_029066(1)   1                                15.38%                           43.28%                        
                                  12             23.2Kb                   incomplete(30)                integrase,lysin                              1200805-1224091          0                        29                      23                               3                                89.6%                            3                                yes                              14                               PHAGE_Salmon_SE1_NC_011802(3),PHAGE_Erwini_phiEt88_NC_015295(3),PHAGE_Entero_ST104_NC_005841(3),PHAGE_Entero_P22_NC_002371(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Entero_Sf101_NC_027398(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Paenib_Harrison_NC_028746(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Gordon_Blueberry_NC_030943(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Thalas_BA3_NC_009990(1)   6                                10.34%                           46.69%                        
                                  13             28Kb                     questionable(70)              integrase,transposase                        1244357-1272368          1                        36                      21                               11                               88.8%                            4                                yes                              17                               PHAGE_Salmon_SPN3UB_NC_019545(3),PHAGE_Entero_P22_NC_002371(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Sodali_phiSG1_NC_007902(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Salmon_SE1_NC_011802(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_HK022_NC_002166(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Salmon_vB_SemP_Emek_NC_018275(2),PHAGE_Pseudo_phi3_NC_030940(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Salmon_epsilon34_NC_011976(2),PHAGE_Pseudo_PS_1_NC_029066(2),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Clostr_phiCTC2B_NC_030951(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Lactoc_28201_NC_031013(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Sinorh_phiLM21_NC_029046(1)   2                                8.33%                            43.96%                        
                                  14             42.7Kb                   intact(150)                   coat,head,transposase,virion,tail,integrase     1296478-1339203          2                        43                      27                               6                                76.7%                            10                               yes                              15                               PHAGE_Escher_HK639_NC_016158(8),PHAGE_Cronob_phiES15_NC_018454(7),PHAGE_Pseudo_PS_1_NC_029066(6),PHAGE_Pseudo_YMC11/02/R656_NC_028657(4),PHAGE_Entero_P4_NC_001609(2),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(2),PHAGE_Sodali_SO1_NC_013600(2),PHAGE_Escher_YD_2008.s_NC_027383(2),PHAGE_Pseudo_MP1412_NC_018282(2),PHAGE_Edward_eiAU_183_NC_023555(2),PHAGE_Escher_Envy_NC_031081(2),PHAGE_Paenib_Harrison_NC_028746(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Rueger_DSS3_P1_NC_025428(1),PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Citrob_Stevie_NC_027350(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Lactob_phiPYB5_NC_027982(1),PHAGE_Escher_HK578_NC_019724(1),PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Escher_slur05_NC_028901(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Entero_JL1_NC_019419(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Escher_e4/1c_NC_024210(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Pseudo_PaMx42_NC_028879(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Entero_vB_EcoS_Rogue1_NC_019718(1),PHAGE_Burkho_KL1_NC_018278(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Escher_Tls_NC_009540(1),PHAGE_Pseudo_PAE1_NC_028980(1),PHAGE_Rhizob_vB_RglS_P106B_NC_023566(1),PHAGE_Escher_Gluttony_NC_031113(1),PHAGE_Entero_EK99P_1_NC_024783(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Lactob_Lj771_NC_010179(1),PHAGE_Shigel_Stx_NC_029120(1)   5                                18.6%                            46.44%                        
                                  15             53Kb                     intact(150)                   integrase,portal,terminase,capsid,tail,lysin,lysis,virion,plate,transposase     2109671-2162670          0                        47                      36                               6                                89.3%                            5                                yes                              17                               PHAGE_Salmon_Fels_2_NC_010463(15),PHAGE_Salmon_RE_2010_NC_019488(13),PHAGE_Erwini_ENT90_NC_019932(9),PHAGE_Ralsto_RSA1_NC_009382(5),PHAGE_Entero_PsP3_NC_005340(5),PHAGE_Burkho_KS5_NC_015265(5),PHAGE_Entero_186_NC_001317(5),PHAGE_Salmon_SP_004_NC_021774(4),PHAGE_Salmon_SEN1_NC_029003(4),PHAGE_Ralsto_RSY1_NC_025115(4),PHAGE_Salmon_SEN5_NC_028701(4),PHAGE_Entero_WPhi_NC_005056(3),PHAGE_Burkho_phi52237_NC_007145(3),PHAGE_Salmon_SEN4_NC_029015(3),PHAGE_Burkho_KL3_NC_015266(3),PHAGE_Klebsi_phiKO2_NC_005857(2),PHAGE_Yersin_L_413C_NC_004745(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Burkho_KS14_NC_015273(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Burkho_phiE202_NC_009234(2),PHAGE_Escher_D108_NC_013594(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Escher_172_1_NC_028903(1),PHAGE_Haemop_HP1_NC_001697(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Pseudo_phiKZ_NC_004629(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Escher_pro483_NC_028943(1)   15                               31.91%                           46.46%                        
                                  16             18.3Kb                   questionable(80)              transposase,tail                             2570845-2589186          0                        24                      15                               4                                79.1%                            5                                no                               14                               PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Aeromo_Aes012_NC_020879(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Hypert_2_NC_014321(1),PHAGE_Pseudo_H101_NC_029094(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Vibrio_12A10_NC_029067(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Clostr_c_st_NC_007581(1),PHAGE_Bacill_BCD7_NC_019515(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Pseudo_H103_NC_028819(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Sulfol_SMV1_NC_023585(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Yersin_phiR1_37_NC_016163(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Burkho_AH2_NC_018283(1),PHAGE_Thalas_BA3_NC_009990(1)   2                                12.5%                            42.32%                        
