gi|00000000|ref|CP022358.1|  Shewanella bicestrii strain JAB-1 chromosome, complete genome. 4800597, gc%: 48.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1225983..1228103                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CF168_05405; phage(gi100068)      2.12e-07            ShewanellabicestriiMKHLSISTKLLWITSALFLSIVAILSISLWWTLSDQNTELSNQVQETLQTETRDKLEARAGEYGEMVAGFINEAYRIPFSFSGMLESTAEDLPLKRDRLELAVAAVLKKNNQISSMYAQFEPNGYDGLDSEFLNVEVSHSVASSGALEVYYTRNDDGTVEHHQVDDSAEKYVSTLNEFGIREAEWYLCAKETLKPCLMEPYLYEISPGNTALMTSLTVPVVKHKQFIGVVGVDVNLPVFQALIDKLSKSLYGGQAKVTLLSTRGLVVAASHYSKKARPLSESIDPKLASQIVALHKNGGYMASDDEIIVAYPIKIPLAKAEWSLAIQVPKAQAFKSSIELNDKMDEMATSLGSILLMVGLAVSILAVVTISIVIRSIIAPLRMIQGRVEHLASADGDLTQSIVVDAHAELIALGKGFNSFIHKLKDLISELKTLAGRTQEESLSSAQIAELTRDSVHRQYGEIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVRLSEESLTKAMEYVTTMSQESMQAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTQSSTDDISVLIDALQQEVNSASGIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEISSQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQLGKLKT
complement(1228331..1228407)       tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCACGGTTCAAGTCCGTGAGGGGCCACCA
complement(1228697..1230547)       PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; CF168_05415; phage(gi331028036)     3.72e-35            ShewanellabicestriiMDHTPQSQLKLLLAKGKEQGYLTYAEVNDHLPADMVDSDQIEDIIQMINDMGIRVFEEAPDADDMMMSEDNTDEDAAEEAAAALATVESELGRTTDPVRMYMREMGTVELLTREGEIVIAKRIEEGINTVQSSVAEYPQAIAMILEQYDQYEADELRLSDIISGFVNPDEEDLGPTATHIGSELSEEDLDDEDDDEDDEDEDGDGDGDDDGNKGPDPEEARERFSQLRTAYENALKIIDAKGREHPESIQALFEIGEIFKEFRLVPKQFDRLVKSMRSMMDRVRVQERLLMKLCVEQAKMPKKNFVKFFTGNETNLDWFDAEKNSTKPYAEGLRMVEEDVQRCRSKLAAIEEETGLVIAAIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPSPEELAERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLKSATHEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILKSFLDE
complement(1230683..1232407)       PHAGE_Helico_phiHP33_NC_016568: DNA primase; CF168_05420; phage(gi371671350)         8.22e-49            ShewanellabicestriiMAIPRDFINELIARTDIVELIDRKVPLKKAGKNYSACCPFHSEKSPSFTVSRDKQFYHCFGCGAHGNAIDFVMEYDRLDFVDAIEDLAGQLGLEVPREQGTGKRQDDGLSRDLYQLMEEASRFFQTQLRQHQDKQKVIDYLAYRGLSDDIVEHFGIGFAPDGWDGLLSRYRHSQDAQDKLLTAGMLISNDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKGNELYGLYELKQRHRDPDKVLIVEGYMDVVALAQYGVDYAVASLGTSTTAEQFQLLLRSAKEVICCYDGDRAGNEAAWRAFETALPLLKPGDKVRFMFLPQSEDPDSMVRKIGKDAFEQMMESAITLPEFLFDTLATKFGTDKGNLAKQAFGLIEKIQDTVLQNLLLENLAHKLGMNSSDDMKKKLGFSVKQTKPAVSTGLKGRGTPLRLAIALLVQHPELGVGLSPQPALNHLQMPGIDLLPLLLELTREHRLNSAQLLEQFRDSPHSGTLHKLAQWDHQVADENLLEKFKQTLVWLNNQYIEQRYQELSLKQTHTKEEKIQLQKLISVMKGLN
complement(1232491..1232934)       PHAGE_Bacill_G_NC_023719: gp509; CF168_05425; phage(gi593777964)                     2.27e-15            ShewanellabicestriiMSLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQRRDSIAQYEAAGRSELAAAEAEEIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGKVMGALKPKVQGRADMGAIGAMIRAKLQ
complement(1232941..1233156)       PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; CF168_05430; phage(gi460042545)     1.86e-05            ShewanellabicestriiMPIIKVRENEPFDVALRRFKRSCEKAGILADVRAREFYEKPTTARKRAKAAAVKRLAKKLSRENARRVRLY
1233371..1234387                   PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CF168_05435; phage(gi16130960)     0.0                 ShewanellabicestriiMRVLGIETSCDETGIAVYDDKLGLLSHALYSQVKLHADYGGVVPELASRDHVRKIVPLIRQALKNANTEIADLDGIAYTKGPGLIGALLVGACVGRSLAFAWNKPAIGVHHMEGHLLAPMLEDDAPEFPFVALLVSGGHSMLVKVDGIGLYEVLGESVDDAAGEAFDKTAKLMGLDYPGGPRLAKLAAKGEPAGYQFPRPMTDRPGLDFSFSGLKTFTANTIAAEPDDEQTRANIARAFEEAVVDTLAIKCRRALKQTGYNRLVIAGGVSANTRLRETLAEMMTSIGGRVYYPRGEFCTDNGAMIAFAGLQRLKAGQQEDLAVKGQPRWPLDTLPPVA

#### region 2 ####
2886435..2887673                   PHAGE_Clostr_c_st_NC_007581: putative uracil permease; CF168_12515; phage(gi80159777)     4.70e-36            ShewanellabicestriiMKRLAIPLQGAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFIAPILYGVQTWGIPSTMGGIIAAGFVYILLGALVKVRGTDFIHRLLPPVVVGPVIIIIGLGLAPVAVNMALGKSGDGSLTLVPTNTALIISLASLCTTIAVAIFAKGLLKVMPILAGIVVGYGLSLAFGIVDFAVVTAASWIAIPKFVAPEFNWHAIAFMIPVAIAPAVEHIGDILAISNVTGKDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNFDPRIMTWTAITAITLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLSEPRNLSIVGVTLVFGIGGMAFGIGSFSLTGISLCGIVAITMNLLLPASKHHERDAASH
complement(2887802..2888134)       PHAGE_Rhizob_vB_RleS_L338C_NC_023502: putative glutaredoxin; CF168_12520; phage(gi588498654)     1.12e-05            ShewanellabicestriiMETVEKIKQQIAENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAELPKYANWPTFPQLWIEGELIGGCDIVVDMYQKGELQPLIKATADKYKTAE
2888361..2888945                   superoxide dismutase [Fe]; CF168_12525                                               N/A                 ShewanellabicestriiMAFELPALPYAKNALEPHISQETIEYHYGKHHNTYVVKLNGLIEGTDFAGKSLEEIIKTSTGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGPVADAINAAFGSFDAFKAQFTDSAVNNFGSAWTWLVKKADGTVAIVNTSNAATPLTDSTVTPILTVDVWEHAYYIDYRNVRPDYLAHFWQLVNWDFVNQNFAG
2889197..2891131                   PHAGE_Thermu_TMA_NC_015937: serine kinase; CF168_12530; phage(gi343960439)           6.38e-40            ShewanellabicestriiMGIFEHYQKRYEQKLDEEYTLQEYLDICKEDRSAYMSASERLLLAIGEAEIIDTAKNPTLSRIFSNRLISRYPAFKDFYGMEDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLAEKLKALMQKVPIYILSANGVRSPVNDHPFCLFDVEEDGQLLRDEFNIPTRYLKTIMSPWAVKRLHEFGGDISKFRVVKVYPSILDQLAIAKTEPGDENNQDISSLVGKVDIRQLEHFSQDDADAYAYSGALCRANQGMMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPYSGIILAHSNESEWSTFKNNKNNEAFLDRVYIVKVPYCLRVSEELQIYKKLLQNSELSQAPCAPGTLETLAQFSVLSRIKTPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHSEIAANPVHLFYVLERQIEQEQFPGDTAERYLEFLKGYLIPKYVEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRSALNAELEKIEKPAGISNPKDFRNEIVNFVLRARASHEGNNPLWTSYEKLRTVIEKKMFSNTEDLLPVISFNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRVRKSS
2891197..2892465                   PHAGE_Thermu_TMA_NC_015937: conserved bacterial protein; CF168_12535; phage(gi343960436)     2.29e-18            ShewanellabicestriiMANFIDRRLNAKGKSTVNRQRFINRYKQQIKKAVSDAVTRRSVTDVDKGEKISIPTRDISEPMFHQGKGGVRDRVHPGNDQFTRGDKIDRPQGGAGGGAGKGDASDSGEGNDDFVFEISKDEYLELLFEDLELPNLQKNRLNKLVEYQIYRAGFTNDGVPANINIVRSLRSSLARRIAMSASKKKLLKELEQELAELENIPGTKAELILDLKAQIEALKQKIAKVPFIDTFDLRFNNFARREVPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMHEIQQARYPADEWNIYAAQASDGDNWADDSPTCRQLLEQKILPLVRYFSYIEITNRAHQTLWREYESLQQHYDNIAVQHIRQAEDIYPVFRELFKKQAV
2892475..2894001                   PHAGE_Thermu_TMA_NC_015937: SpoVR; CF168_12540; phage(gi343960437)                   1.56e-05            ShewanellabicestriiMGIKEAKTRTALSDGPDWSFELLQSYLKEIERVAAIYKLNAYPNQIEIITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKYGVEQVESIIDSCHALMNYGVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTHQQQQPSTTKRRFPAEPQENILYFIEKNAPLLESWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFMMEFLQSHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRMCENPTEEDKVWFPDIAGSNWLDTLHFAMQNFKDESFISQYLSPRVIRQFKLFGIHDDEKRNYLSVSAIHDEQGYQDIRNLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPSNDIPLASTYKEVLKHLHRLWGFTVSLEQLNADTSVTLLASCPEQPKAD
2894117..2895333                   PROPHAGE_Escher_CFT073: transposase insF; CF168_12545; phage(gi26249410)             3.51e-34            ShewanellabicestriiMTSTIKRTQRDYSLAFKLAVVDQVEKGELTYKQAQDKYGIQGCSTVLVWLRKHGKLDWSQGTPSTSMRGQLMTEPTELTPEQKIKALETELEDTRMKAAFFEAIVEKLRTDYGISVGKKATRETLQEKTAIGYRVTQCCRYLGISRQAYYQQCQRQTEWEQRERQVVQTVQYERLFQPRVGTRKMQYLLNKMHQIVIGRDRLFRCLRAHRLLVTPKRAYHKTTNSHHRFRCHPNLLKPSEQQVDISRSEQVWVADITYLPLQDNEAYLSLVTDAWSRKIVGYHVDDNLKTDGVLTAYKRALKQRQDKSKPLIHHSDRGIQCCSNAYQAVHAHHGVTCSMTDGYDCYQNALAERVNGILKQEFLTHKPATLEEARQMVTEAVAIYNQRRPHLALKYKTPDEVHRAF
