gi|00000000|ref|CP023149.1|  Mycobacterium intracellulare strain FLAC0181 chromosome, complete 5613941, gc%: 67.93%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
3278392..3278436                   attL                                                                                 N/A                 TTCAAAACCCGTCCAGTGTGAGTTCGAATCTCACCGAGGGCACCA
3278512..3279879                   PHAGE_Mycoba_Gaia_NC_026590: integrase; CKJ67_15260; phage(gi764160134)              1.12e-58            MycobacteriumintracellulareMPVRTQSAGGFTLRTVTPKKRSVRHGAEDRWHRPARRGEQVNWPADQAGGPVWCTDPKHTKAPGTVVCTARHGQGKRWLARWVDHEGNEATKAFHRRADAQRHADSKRTEIDTGTYADPHRSAVTFGTIAEAWIATKAKRAPKTVGGYRGLLDVLILPKWQGEPLHDITHERIQTWITWLSTDPEARQRKTANGNNTGLSPARVIQAHQVMHQVLAYAVRAKYLAVNPATDIELPSKPQSKEIALTHDQVRALADETASAPVRQRSDLRPSLTSLAAMVRFLSYSGLRFGEAAALRVGDVDLAKRRVSISKGVTGVRGQGRIEGETKTHQRRSVPILTTECVEELRQAVAGRDPGEFLFPGPDGGAMTNGWFRVRFDKAVAKLGLDGVTPHTLRHTAGSLAISESPTATGVLLASKLLGHRNLTTTANTYSHMLDGDFDKLAVAMDKAVQAPANG
3280023..3280205                   PHAGE_Mycoba_Gaia_NC_026590: excise; CKJ67_15265; phage(gi764160133)                 8.53e-11            MycobacteriumintracellulareMSEFMTHPEWCEKARITQSTGYYWRQIGKGPKAARIGKQLLYRRADVDAWLDSQFAGAGA
3280247..3280426                   hypothetical protein; CKJ67_15270                                                    N/A                 MycobacteriumintracellulareMGELWLIGGTDGKVHLIFDYPNPDWSDDRELTPEIAEKIGRELIRAAQKAKPRKRYRLV
3281231..3281479                   hypothetical protein; CKJ67_15275                                                    N/A                 MycobacteriumintracellulareMNVNMKVVPSSIELSPLVDAEEGQAEGIGVRFHICQSWPQDDVDSVLMPFDAESALSLGAQLIAWSDWLAGRPERDWSKLTA
3281868..3282266                   PHAGE_Mycoba_Dylan_NC_022325: hypothetical protein; CKJ67_15280; phage(gi543170525)     9.27e-07            MycobacteriumintracellulareMQRAGGRGRSGQVNRPCIGCGKLIAKGSRCGPCTPKRQRPDGHPHTNTGRMKRLSKATRKAQPWCLDCRATTNLTADHIIPVSERPDLAHEPLNLTTRCRSCNGRRGDRCTDAERGEVLHAIAKRRARLARF
complement(3282263..3282451)       hypothetical protein; CKJ67_15285                                                    N/A                 MycobacteriumintracellulareMLATGTLLLPAIAVVMALVAACLVTIDRITRKRLIRRGNDLLAKLKALREEIDELPDMDGRS
3283361..3284836                   PHAGE_Strept_Lilbooboo_NC_048155: hypothetical protein; CKJ67_15290; phage(gi100002)     1.02e-47            MycobacteriumintracellulareMRAGPKRAVDDSVLPFRPLSEGSARFAAFCEEFVKVRESSRVVPLRLRAWQLELVGMVLDADPQPRVAGWCLPRGQGKSTLVAALGVYELMTGGEGAAVIVAAVDERQAGIVFGVAARMVELNDDLAARVQVFKDRLVVPSRGASFACLPASPASLEGLDYSLAIVDEIGRVAPETWEVIALAQGKRERSTLIGIGTPGPTDDNVLTRLRAYSFDHPEDTSQVYREFSATGFEDHPPSCEHCWELANPALDDYLHRDALRALLPPKMTEAHFRRARLCQFVGPVEDAFLTADVWDGLDTGQAIPDGAEIVIALDGSFGGAYADTTAVLLGTVSVAPHFQPLRVWQSDGTDDYRVPLREVEDTIREACKRYRVREVVADPFRLNHTLQVLAAERIPISEFPHSPARLTAATTDLYSAAQNGRMTHDGSELLRRHVLAATLVESDKGLRLGKVSRSRTAPKIDLAACMVMCHSRATWLAAQQKPRKRTVSFAA
3284859..3286220                   PHAGE_Mycoba_Rufus_NC_028810: portal protein; CKJ67_15295; phage(gi971745359)        1.91e-39            MycobacteriumintracellulareMSSDLLVELLQTLDGPQHRYTELDRYASGRQKLAYLSPEARIALPALNRIVSNIPGLAVTSLAERLRVTGFKGVDVWADWLANDLDQTSTVLHREALTFGDSYVICWARPDGSPLVTVESPQQVAAIRDPATREIASAVKRWRTKTETHAMVYLADRIEHWRARTAGAATSAFELVEVIEHHLETVPVVGFSNQLRILGCGHSELDDLIPLVDGLNATLAGLAVAQEFTARPRRWATGIELVEVPKLDADGNPILDGDGQPVTETVNPIPEGNRAMLSENDQAKFGQLPGADLAGYEAACRIWLQQIMAVSALPAHMVGITTENPSSSEAIRASESALTARAEQRQAIFGRSWEQVARLMVAIRDGARVDSVTVNVQWRDPSSTSVAAEADAVTKLVQAGILSKSGALRRLGYSEDEIVRESASRANEEENESAMGIFYGRQIHDAGKAAQAA
3286377..3286724                   hypothetical protein; CKJ67_15300                                                    N/A                 MycobacteriumintracellulareESAGDSFPRAYVEDLRKESAGYREKAKQADERADALAKRLHRELVTVTGRLENPADLAFDAEHLDDADKLNAAIDALLAERPYFAKRKVAGDAGQGPRGEADAGVNLLGLLRGER
3287059..3287397                   PHAGE_Mycoba_Archie_NC_028878: hypothetical protein; CKJ67_15305; phage(gi971751520)     3.04e-40            MycobacteriumintracellulareMITESVEVYRGDTDKYGNPTKALHGTVSGVFAWGTGSSSYRAFPDRAGKRESTRAIADLYVPRGTDLKTRDRVKRANGDEYAVVGRPLWDQPHPMTGHNFSWMVFQVVAISG
3287477..3288337                   PHAGE_Synech_S_CBS1_NC_016164: major capsid protein; CKJ67_15310; phage(gi356870798)     7.54e-08            MycobacteriumintracellulareMAIEVTSGNTTLLQSQVADILVNPLAQESTFLAAGPQIFDTSDQLRIPRVASGVTAGFVGEGVQITDGDVSFDEVTLLPSTLKSLKVLVRFSNEMTRQSVVALDATLKTTLVTNVAEALDKALWDGDGSSNTIKGIFRQTGIATGTLDLTDPDSLIDALAVAQGNHVSPTHWVMTAASFAAIRKVKVGTSDKRYVIDPSTIQNGTAFQLFGLPVIITDNIPAVSTKNRVALVDFSKVAVARDVDAEVKILDQTWGDYDSVGIRVVTRYDVGLLQAKAVTLLTEASS
3288340..3288657                   PHAGE_Mycoba_Snenia_NC_028778: hypothetical protein; CKJ67_15315; phage(gi971742451)     2.55e-08            MycobacteriumintracellulareMAAPTANHLSAFTGQAIDAGQADAVISVVTALASAYTRGRGFVAGEPNNDIRAAILTASARLLSDTSQVKSGEQMGPFQVQYRAGFDGWSTAELATLNRYRERAR
complement(3288980..3289252)       hypothetical protein; CKJ67_15320                                                    N/A                 MycobacteriumintracellulareMTLADVPAPRDATAVHGWLEDSSDPRRHFTTRTRTIAGTITVEVSGEQVQSGDILRRYGYVSGERELTASQLRQLAAACLDAADELDQTG
3289485..3289529                   attR                                                                                 N/A                 TTCAAAACCCGTCCAGTGTGAGTTCGAATCTCACCGAGGGCACCA
3290262..3291593                   PHAGE_Pelagi_HTVC008M_NC_020484: adenylate/guanylyl cyclase; CKJ67_15325; phage(gi460042455)     9.69e-12            MycobacteriumintracellulareMAAKDCGGPPRWPDGSSKRPDCVAAARAQSRARNQHYADSAARQYRVLAIAAWLAVLVCVDFVALQLITGVWTWQIISLNALAAMIFAAVPWLHRFGDLIAPLTFIGAAYVTVFVSTWDAGTGTGAQFFFLVGACLVVLLLGIEHTVLAAGLTAVGAGLVIALEFLVPRDTGLQPAWAQSMTFVVTIVSACVMVFVAVWFALRDTQRAEAVMEAEYERSEALLANMLPGSIAERLKSSSRSVIADKYDEVSVLFADIVGFTERASATTPADLVRFLNRLYGAFDELVDKHGLEKIKVSGDSYMVVSGVPRARPDHAFALADFALDMANVAAALKDPHGDPVALRMGMACGPVVAGVVGSRRFFYDVWGDAVNVASRMESTDSVGRIQVPEAMYERLKNEFVLQERGRIEVKGKGVMRTWYLIGRKADEEPADLLTGRPHTVHV

#### region 2 ####
3822476..3823981                   PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; CKJ67_17680; phage(gi100004)     3.99e-97            MycobacteriumintracellulareMAATKASPATDGPVKRTATKSASSPAKRPAAKAANGSAPAKRAAKTTARSTKSDAAEPAKKTRAKGAEAKGRGTKAAKGGPADPDALDSDGAVEDLDNEPDLEGEPGEDLDIDSDLSLDDLEEDVASEGAEVESGDSEVGDDEEAPAPAAAAEPAADEDDEIAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTEMTERGDKLPAAQRRDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
3824116..3824532                   RidA family protein; CKJ67_17685                                                     N/A                 MycobacteriumintracellulareMSAHRTVVASGSEFESVAGYSRAVRVGPHVAVAGTTGTGPAGDIAAQTRDALRRIDIALQQAGASLTDVVRTRLYVTDISRWREVGAVHEEVFGAIRPVATMVEVSALIAPELLVEIEADAYVDSPVTGGKAPSAPGG
complement(3824478..3824849)       DUF952 domain-containing protein; CKJ67_17690                                        N/A                 MycobacteriumintracellulareMTVVTFAADVLVHLCGAEQWAQARRDGAIRPADGADFIHLSTPEQVHLPANRLYRGRRDLVLLRIDPARLDAPVRWEPGVPTDPASMLFPHLYGTLPVAAVTRVTPYPPGADGAFPPVTGEST
3824973..3825158                   PHAGE_Mycoba_DrLupo_NC_048743: tail assembly protein; CKJ67_17695; phage(gi100053)     1.03e-09            MycobacteriumintracellulareMNATLTSPELTRADRCDRCGAAARVRAKLPSGLELLFCQHHANEHEAKLTELDAVLEVSGS
3825223..3826224                   YihY/virulence factor BrkB family protein; CKJ67_17700                               N/A                 MycobacteriumintracellulareMSDQVAKPSRHHIWRITLRALSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGTMAYVAPLFGPDMLPNILRQLLSTAHSVFSPSVVNEIIEPTVRDIASNARGEVVSLGFIISLWAGSSAISAFVDSVVEAHDQTPLRHPVRQRFFALFLYVVMLVVVVATAPLVVVGPRKVEEHIPLGLSNVLRYGYYPALIIGLTLGVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITSTGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPTTHAHRVRTWLFSRSPALKKTVETLASPIANPATQQRDTAPAKPPG
complement(3826225..3826473)       PHAGE_Mycoba_OkiRoe_NC_024366: hypothetical protein; CKJ67_17705; phage(gi658310975)     6.08e-20            MycobacteriumintracellulareMSGMQTQTIERTETDERVDDGTGSDTPKYFHYVKKDKIAESAVLGNHVVALCGEVFPVTKAAKPGSPVCPECKQIYDRLKKG
3826534..3826980                   DUF3099 domain-containing protein; CKJ67_17710                                       N/A                 MycobacteriumintracellulareMWDSGEMKHGSDAGFDGSFDDFAGHKGRPVLITAAEPSYEEQHRARVRKYLTLMAFRIPALILAALAYGAWHNGLISLAIVAVSIPLPWMAVLIANDRPPRRPDEPRRFDNARRRTPLFPRAERPALEAPRHPQPGWPPDPRGGIDDG
complement(3826977..3827963)       PHAGE_Mannhe_vB_MhM_1127AP1_NC_047750: hypothetical protein; CKJ67_17715; phage(gi100031)     2.06e-09            MycobacteriumintracellulareMTHGNAPLSVEGRRRLVARCVDRPIAHVAAEMGISRACASKWVNRFRRFGELGLYDRSSAPVGQPTATAAEIISAIEAMRRGRKWSAARIAFELNARGIVIGRRTVSRQLVALGLHRRKFLDPSGDLNRVPQRIIARRPGHMVHVDVKKVGRIPDGGGWRVHGKNSAQGRASRRARPGYVYLHSAVDGYSRLTYTEALTDEKAITAIGFMHRARVWFAAHGIDRIQRIVTDNGSCYRARDFAHVLHGARHQRITPYTPRHNGKVERYHRILAEEFLYARTWTSESQRTEALKVWNIHFNYHRPHSAADGQPPASRLTTGVTNVLSSYS
3827883..3828086                   hypothetical protein; CKJ67_17720                                                    N/A                 MycobacteriumintracellulareMGNGTVDAAGNEAATAFNGQRGITVGHGRVPSGSGRGVWRFLILPPKDPSSSHPDHPGVYNVMTRNS
3828222..3829211                   PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; CKJ67_17725; phage(gi100004)     1.19e-82            MycobacteriumintracellulareMTVQAEREVAMANASTSRFDGDLDAQSPAADLVRVYLNGIGKTALLNAAGEVELAKRIEAGLYAEHLLETRKRLGENRKRDLEAVVRDGKAARRHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREMHQNLGREATDEELAAESGIPVDKINDLLEHSRDPVSLDMPVGSEEEAPLGDFIEDAEAMSAENAVIAELLHTDIRSVLATLDEREHQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQIERDVMSKLRNGERADRLRSYAS
