Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 8 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              48.4Kb                   intact(130)                   transposase,lysin,terminase,portal,coat,head,tail,integrase     1460394-1508796          2                        68                      65                               1                                97%                              2                                yes                              34                               PHAGE_Entero_Sf101_NC_027398(19),PHAGE_Salmon_HK620_NC_002730(18),PHAGE_Shigel_Sf6_NC_005344(13),PHAGE_Entero_IME10_NC_019501(10),PHAGE_Entero_c_1_NC_019706(10),PHAGE_Entero_HK140_NC_019710(8),PHAGE_Salmon_SEN22_NC_028696(8),PHAGE_Salmon_epsilon34_NC_011976(8),PHAGE_Salmon_103203_sal5_NC_031946(7),PHAGE_Entero_mEp235_NC_019708(7),PHAGE_Escher_HK75_NC_016160(7),PHAGE_Entero_VT2_Sakai_NC_000902(7),PHAGE_Salmon_118970_sal4_NC_030919(7),PHAGE_Entero_mEpX1_NC_019709(6),PHAGE_Salmon_g341c_NC_013059(6),PHAGE_Salmon_BTP1_NC_042346(5),PHAGE_Stx2_II_NC_004914(5),PHAGE_Escher_phage_NC_004913(5),PHAGE_Entero_HK633_NC_019719(5),PHAGE_Salmon_vB_SemP_Emek_NC_018275(5),PHAGE_Sodali_phiSG1_NC_007902(4),PHAGE_Entero_mEp213_NC_019720(4),PHAGE_Stx2_c_1717_NC_011357(4),PHAGE_Stx2_c_86_NC_008464(4),PHAGE_Salmon_ST160_NC_014900(4),PHAGE_Entero_HK629_NC_019711(3),PHAGE_Entero_mEp234_NC_019715(3),PHAGE_Escher_PA28_NC_041935(3),PHAGE_Escher_HK639_NC_016158(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(3),PHAGE_Entero_HK106_NC_019768(3),PHAGE_Entero_HK544_NC_019767(3),PHAGE_Ralsto_RSK1_NC_022915(3),PHAGE_Entero_UAB_Phi20_NC_031019(3),PHAGE_Entero_P22_NC_002371(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Entero_HK022_NC_002166(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Entero_mEpX2_NC_019705(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Deep_s_D6E_NC_019544(1),PHAGE_Rhodoc_ReqiPoco6_NC_023694(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Agroba_Atu_ph07_NC_042013(1),PHAGE_Vibrio_12A10_NC_029067(1),PHAGE_Mycoba_Enkosi_NC_028936(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Vibrio_12B3_NC_021067(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Rhodoc_ReqiPepy6_NC_023735(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Salmon_epsilon15_NC_004775(1)   10                               27.94%                           46.72%                        
                                  2              32.9Kb                   intact(110)                   tail,transposase,integrase                   1531438-1564379          0                        29                      25                               2                                93.1%                            2                                yes                              6                                PHAGE_Entero_P88_NC_026014(18),PHAGE_Salmon_SEN4_NC_029015(8),PHAGE_Salmon_SEN5_NC_028701(8),PHAGE_Escher_P2_NC_041848(5),PHAGE_Salmon_Fels_2_NC_010463(5),PHAGE_Escher_pro483_NC_028943(5),PHAGE_Salmon_RE_2010_NC_019488(4),PHAGE_Salmon_SP_004_NC_021774(3),PHAGE_Yersin_L_413C_NC_004745(3),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Entero_WPhi_NC_005056(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Erwini_ENT90_NC_019932(2),PHAGE_Burkho_KS14_NC_015273(2),PHAGE_Entero_P2_NC_001895(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Entero_SfMu_NC_027382(1)   18                               62.06%                           51.53%                        
                                  3              32.9Kb                   incomplete(50)                integrase,transposase                        1767951-1800942          2                        56                      49                               4                                94.6%                            3                                yes                              18                               PHAGE_Entero_BP_4795_NC_004813(25),PHAGE_Stx2_vB_EcoP_24B_NC_027984(16),PHAGE_Entero_933W_NC_000924(16),PHAGE_Entero_VT2_Sakai_NC_000902(16),PHAGE_Stx2_II_NC_004914(14),PHAGE_Stx2_c_86_NC_008464(13),PHAGE_Entero_YYZ_2008_NC_011356(13),PHAGE_Stx2_c_1717_NC_011357(9),PHAGE_Escher_PA28_NC_041935(8),PHAGE_Entero_lambda_NC_001416(7),PHAGE_Escher_phage_NC_004913(7),PHAGE_Entero_DE3_NC_042057(6),PHAGE_Entero_SfI_NC_027339(4),PHAGE_Shigel_Sf6_NC_005344(3),PHAGE_Entero_Min27_NC_010237(3),PHAGE_Entero_HK544_NC_019767(3),PHAGE_Entero_HK542_NC_019769(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Xantho_Xp10_NC_004902(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Xantho_Xop411_NC_009543(2),PHAGE_Escher_Pollock_NC_027381(2),PHAGE_Entero_HK630_NC_019723(2),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Vibrio_12A4_NC_021068(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Acinet_phiAC_1_NC_028995(1),PHAGE_Shigel_Stx_NC_029120(1)   25                               44.64%                           47.06%                        
                                  4              28.6Kb                   intact(130)                   integrase,transposase                        1934251-1962905          0                        32                      17                               7                                75%                              8                                yes                              10                               PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_P1_NC_005856(2),PHAGE_Pectob_CBB_NC_041878(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Escher_PA28_NC_041935(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Pseudo_pf16_NC_041881(1),PHAGE_Klebsi_vB_KpnP_KpV41_NC_028670(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Bacill_IEBH_NC_011167(1),PHAGE_Serrat_BF_NC_041917(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Yersin_fHe_Yen9_04_NC_042116(1),PHAGE_Klebsi_vB_KpnP_KpV475_NC_031025(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Klebsi_vB_KpnP_KpV71_NC_031246(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Pseudo_M6_NC_007809(1)   5                                15.62%                           50.53%                        
                                  5              54.7Kb                   intact(120)                   integrase,transposase,lysin,head,tail        2021857-2076583          4                        76                      56                               13                               90.7%                            7                                no                               25                               PHAGE_Entero_DE3_NC_042057(17),PHAGE_Entero_lambda_NC_001416(14),PHAGE_Entero_HK629_NC_019711(14),PHAGE_Entero_HK630_NC_019723(14),PHAGE_Entero_YYZ_2008_NC_011356(13),PHAGE_Entero_BP_4795_NC_004813(12),PHAGE_Stx2_c_1717_NC_011357(9),PHAGE_Phage_Gifsy_1_NC_010392(8),PHAGE_Entero_HK225_NC_019717(7),PHAGE_Entero_cdtI_NC_009514(7),PHAGE_Entero_mEp237_NC_019704(6),PHAGE_Entero_phi80_NC_021190(5),PHAGE_Salmon_118970_sal3_NC_031940(5),PHAGE_Entero_mEp460_NC_019716(5),PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Phage_Gifsy_2_NC_010393(4),PHAGE_Entero_933W_NC_000924(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Entero_N15_NC_001901(3),PHAGE_Stx2_c_86_NC_008464(3),PHAGE_Entero_VT2_Sakai_NC_000902(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Spirop_1_C74_NC_003793(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Escher_phage_NC_004913(1)   17                               22.36%                           50.62%                        
                                  6              9.7Kb                    incomplete(30)                integrase,plate                              2377262-2387043          0                        10                      7                                1                                80%                              2                                yes                              6                                PHAGE_Entero_933W_NC_000924(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_phiP27_NC_003356(1)   2                                20%                              46.35%                        
                                  7              38.6Kb                   intact(100)                   lysis,lysin,tail,transposase                 2385893-2424523          0                        47                      40                               2                                89.3%                            5                                no                               16                               PHAGE_Entero_lambda_NC_001416(21),PHAGE_Entero_HK629_NC_019711(21),PHAGE_Entero_HK630_NC_019723(21),PHAGE_Entero_DE3_NC_042057(20),PHAGE_Entero_mEp460_NC_019716(7),PHAGE_Salmon_118970_sal3_NC_031940(6),PHAGE_Entero_cdtI_NC_009514(6),PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Entero_mEp237_NC_019704(5),PHAGE_Entero_HK225_NC_019717(5),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Entero_N15_NC_001901(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Escher_D108_NC_013594(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Vibrio_VBP47_NC_020848(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_JenK1_NC_029021(1),PHAGE_Entero_9g_NC_024146(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Pseudo_pYD6_A_NC_020849(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Vibrio_VBP32_NC_020868(1),PHAGE_Escher_pro483_NC_028943(1)   20                               44.68%                           51.52%                        
                                  8              23.6Kb                   questionable(70)              integrase,head,tail,plate,transposase        2556570-2580206          0                        26                      15                               10                               96.1%                            1                                yes                              13                               PHAGE_Vibrio_12B8_NC_021073(3),PHAGE_Entero_JSE_NC_012740(2),PHAGE_Entero_RB49_NC_005066(2),PHAGE_Escher_ECD7_NC_041936(2),PHAGE_Entero_Phi1_NC_009821(2),PHAGE_Entero_GEC_3S_NC_025425(2),PHAGE_Salmon_(in:Nonagvirus)_NC_042025(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Escher_SRT8_NC_042043(1),PHAGE_Citrob_Moon_NC_027331(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Pseudo_pf16_NC_041881(1),PHAGE_Mycoba_George_NC_042312(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_JenP1_NC_029028(1),PHAGE_Entero_CAjan_NC_028776(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Escher_Seurat_NC_027378(1),PHAGE_Proteu_93_NC_027390(1),PHAGE_Entero_phi92_NC_023693(1),PHAGE_Mycoba_Theia_NC_028960(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Proteu_vB_PmiP_Pm5460_NC_028916(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Entero_vB_EcoM_VR26_NC_028957(1),PHAGE_Entero_JenP2_NC_028997(1),PHAGE_Pantoe_vB_PagS_Vid5_NC_042120(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_vB_EcoM_VR5_NC_028881(1),PHAGE_Pectob_PP1_NC_019542(1),PHAGE_Sinorh_phiM7_NC_041929(1),PHAGE_Salmon_BP12B_NC_031271(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Escher_slur01_NC_028831(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Shigel_pSf_1_NC_021331(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Escher_phAPEC8_NC_020079(1)   3                                11.53%                           42.79%                        
                                  9              42.5Kb                   intact(120)                   tail,capsid,head,lysis,transposase           2760760-2803280          3                        50                      44                               4                                96%                              2                                no                               21                               PHAGE_Entero_DE3_NC_042057(17),PHAGE_Entero_lambda_NC_001416(17),PHAGE_Entero_HK629_NC_019711(17),PHAGE_Entero_HK630_NC_019723(16),PHAGE_Phage_Gifsy_1_NC_010392(8),PHAGE_Entero_HK225_NC_019717(8),PHAGE_Entero_cdtI_NC_009514(8),PHAGE_Entero_BP_4795_NC_004813(6),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_mEp237_NC_019704(5),PHAGE_Entero_YYZ_2008_NC_011356(5),PHAGE_Entero_phi80_NC_021190(4),PHAGE_Stx2_c_86_NC_008464(4),PHAGE_Entero_SfV_NC_003444(3),PHAGE_Entero_N15_NC_001901(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_JenK1_NC_029021(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Bacill_Phrodo_NC_031100(1),PHAGE_Bacill_Riley_NC_024788(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Bacill_Troll_NC_022088(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Shigel_Stx_NC_029120(1)   18                               34%                              52.40%                        
                                  10             23.4Kb                   incomplete(30)                plate,integrase                              2805363-2828837          0                        14                      8                                3                                78.5%                            3                                yes                              7                                PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Bacill_vB_BhaS_171_NC_030904(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Pseudo_AF_NC_019923(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Shigel_Stx_NC_029120(1)   2                                14.28%                           47.17%                        
                                  11             21.7Kb                   incomplete(50)                head,capsid,integrase                        2915346-2937051          0                        20                      8                                6                                70%                              6                                yes                              7                                PHAGE_Entero_DE3_NC_042057(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Staphy_phiN315_NC_004740(1),PHAGE_Mycoba_Phipps_NC_028942(1),PHAGE_Mycoba_Minerva_NC_026584(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Staphy_23MRA_NC_028775(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Staphy_phiBU01_NC_026016(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Staphy_DW2_NC_024391(1),PHAGE_Mycoba_Acadian_NC_023701(1),PHAGE_Mycoba_Wanda_NC_022067(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Mycoba_Baee_NC_028742(1),PHAGE_Staphy_Ipla88_NC_011614(1),PHAGE_Burkho_KL3_NC_015266(1)   2                                10%                              48.57%                        
                                  12             54.2Kb                   questionable(80)              tail,head,integrase                          2938434-2992699          2                        80                      62                               14                               95%                              4                                yes                              28                               PHAGE_Entero_DE3_NC_042057(17),PHAGE_Entero_HK629_NC_019711(16),PHAGE_Entero_lambda_NC_001416(16),PHAGE_Entero_HK630_NC_019723(16),PHAGE_Entero_phiP27_NC_003356(15),PHAGE_Entero_BP_4795_NC_004813(14),PHAGE_Phage_Gifsy_1_NC_010392(9),PHAGE_Entero_YYZ_2008_NC_011356(9),PHAGE_Entero_cdtI_NC_009514(9),PHAGE_Stx2_c_1717_NC_011357(6),PHAGE_Salmon_Fels_1_NC_010391(5),PHAGE_Entero_HK225_NC_019717(4),PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Entero_mEp460_NC_019716(4),PHAGE_Escher_PA28_NC_041935(4),PHAGE_Stx2_c_86_NC_008464(4),PHAGE_Entero_SfV_NC_003444(3),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Entero_VT2_Sakai_NC_000902(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Salmon_103203_sal5_NC_031946(2),PHAGE_Escher_PA2_NC_028449(2),PHAGE_Burkho_BcepIL02_NC_012743(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Synech_S_CRM01_NC_015569(1),PHAGE_Burkho_BcepC6B_NC_005887(1),PHAGE_Lactob_phiadh_NC_000896(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Lactob_Lj771_NC_010179(1),PHAGE_Lactob_JCL1032_NC_019456(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Halomo_phiHAP_1_NC_010342(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Pseudo_SM1_NC_041877(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Escher_P13374_NC_018846(1)   17                               21.25%                           50.64%                        
                                  13             49.1Kb                   intact(150)                   tail,transposase,head,portal,terminase,lysin,plate,integrase     3078469-3127575          0                        71                      57                               9                                92.9%                            5                                yes                              27                               PHAGE_Entero_YYZ_2008_NC_011356(26),PHAGE_Entero_BP_4795_NC_004813(25),PHAGE_Stx2_c_1717_NC_011357(20),PHAGE_Entero_cdtI_NC_009514(7),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Entero_DE3_NC_042057(4),PHAGE_Entero_HK629_NC_019711(4),PHAGE_Entero_mEp390_NC_019721(4),PHAGE_Entero_mEp237_NC_019704(4),PHAGE_Escher_PA2_NC_028449(3),PHAGE_Escher_HK75_NC_016160(3),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Escher_phage_NC_004913(3),PHAGE_Entero_HK446_NC_019714(3),PHAGE_Salmon_Fels_1_NC_010391(3),PHAGE_Pseudo_PAJU2_NC_011373(3),PHAGE_Stx2_c_86_NC_008464(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Erwini_PEp14_NC_016767(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Entero_VT2_Sakai_NC_000902(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Salico_CGphi29_NC_020844(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Escher_TL_2011c_NC_019442(2),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Burkho_Bcep176_NC_007497(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Entero_HK630_NC_019723(2),PHAGE_Sinorh_PBC5_NC_003324(1),PHAGE_Nitrin_1M3_16_NC_024217(1),PHAGE_Hypert_2_NC_014321(1),PHAGE_Bacill_Fah_NC_007814(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Xantho_OP1_NC_007709(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Gordon_CaptainKirk2_NC_031072(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Sulfol_SMV1_NC_023585(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Helico_phiHP33_NC_016568(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Staphy_StB27_NC_019914(1),PHAGE_Escher_ECML_117_NC_025441(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Sinorh_phiLM21_NC_029046(1)   26                               36.61%                           52.21%                        
                                  14             50.2Kb                   intact(100)                   tail,head,lysis,integrase                    3495866-3546109          0                        74                      61                               10                               95.9%                            3                                yes                              23                               PHAGE_Entero_lambda_NC_001416(26),PHAGE_Entero_DE3_NC_042057(25),PHAGE_Entero_HK629_NC_019711(22),PHAGE_Entero_HK630_NC_019723(22),PHAGE_Stx2_c_1717_NC_011357(12),PHAGE_Entero_BP_4795_NC_004813(11),PHAGE_Phage_Gifsy_1_NC_010392(9),PHAGE_Entero_SfI_NC_027339(9),PHAGE_Stx2_vB_EcoP_24B_NC_027984(8),PHAGE_Entero_933W_NC_000924(8),PHAGE_Entero_cdtI_NC_009514(8),PHAGE_Escher_PA28_NC_041935(8),PHAGE_Stx2_II_NC_004914(7),PHAGE_Entero_YYZ_2008_NC_011356(7),PHAGE_Entero_VT2_Sakai_NC_000902(7),PHAGE_Entero_HK140_NC_019710(6),PHAGE_Stx2_c_86_NC_008464(6),PHAGE_Entero_HK225_NC_019717(5),PHAGE_Entero_HK106_NC_019768(4),PHAGE_Entero_N15_NC_001901(4),PHAGE_Entero_Sf101_NC_027398(4),PHAGE_Entero_UAB_Phi20_NC_031019(4),PHAGE_Escher_phage_NC_004913(4),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Entero_mEp234_NC_019715(3),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Entero_HK97_NC_002167(3),PHAGE_Entero_mEp213_NC_019720(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Entero_P22_NC_002371(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Salmon_BTP1_NC_042346(2),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Salmon_7_11_NC_015938(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Entero_ES18_NC_006949(1)   24                               35.13%                           49.88%                        
                                  15             10.6Kb                   incomplete(50)                transposase,virion                           4024450-4035122          0                        12                      7                                1                                66.6%                            4                                no                               7                                PHAGE_Prochl_P_SSM3_NC_021559(1),PHAGE_Entero_P4_NC_001609(1),PHAGE_Entero_vB_KleM_RaK2_NC_019526(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Prochl_P_SSM4_NC_006884(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Cyanop_P_RSM1_NC_021071(1),PHAGE_Prochl_P_RSM4_NC_015283(1),PHAGE_Agroba_Atu_ph07_NC_042013(1),PHAGE_Klebsi_K64_1_NC_027399(1),PHAGE_Synech_S_WAM1_NC_031944(1),PHAGE_Bacill_AP50_NC_011523(1),PHAGE_Escher_121Q_NC_025447(1)   1                                8.33%                            53.46%                        
