gi|00000000|ref|CP024175.1|  Bordetella bronchiseptica strain A345 chromosome, complete genome. 5303666, gc%: 68.28%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
516115..516132                     attL                                                                                 N/A                 GGCGGGGGATTTTGAGTC
520512..520937                     PHAGE_Ralsto_RSP15_NC_030948: portal vertex protein; CS343_02435; phage(gi100192)     1.33e-19            BordetellabronchisepticaMGNPIPDVDHRAHGGGWLDACSGDVRERIAACLSALPLAIEVETPSGVVGMAHADFPYDDWQAIHGATFSPEDEDACLWSVDRYRMQYSQPVRNVRAVVHGHMTLRKPAQLGNVYYIDTGGWQDAGRFTLLDLHTLKWWPR
521674..522621                     hypothetical protein; CS343_02440                                                    N/A                 BordetellabronchisepticaMTEKSRSQHILELARELLDDIELGRAEGERLILKASRLARWVGGDEFRDWLKYEMGGYNSSEPLSLKYMARTGRWTNREEKKGWWGPLAQQEAAILAQQAKLATMRTPDIGGDYANVAIMNTHKAMNDAALLIQQLSGIRSRVLAILHGFVSEVYYAKEFDSLTDSIFERYQRDVDALIVQYCGDVLTKIPALMDRLASGDSEAISQALSTCRRIIESFADSIFPPSEQIFEIGGDILKLDASKHQNRINVYVYQRTDSQSRRKRIRQNLSNLFDRVSSGVHKDISSEEARALFLNTYLFLGEILHLDNAATSRS
523135..523467                     PHAGE_Cellul_phi19:3_NC_021789: hypothetical protein; CS343_02445; phage(gi526177007)     7.26e-38            BordetellabronchisepticaQMIASYGMPVGREVFETCVWIGRFVQAWGGKTEMVYRKDVKMHLCGTAKAKDGNVRQAILDLYPRTGGGATPQVGTKGQPGPLYGVSTHAWAALGVALAAQHRMAQERAA
523464..523670                     hypothetical protein; CS343_02450                                                    N/A                 BordetellabronchisepticaMTWARRSDRGDPAKVLERRQEPPPVRSYAGCAHIRLVKSEFDGRRILACSHGMQVGQRCRLFEERRSE
523667..524112                     hypothetical protein; CS343_02455                                                    N/A                 BordetellabronchisepticaMTTRKMLLDRLPADFHARLENWGEVMRSRPHYAVLPTYEVCRRLAKRTGQGAWEGEEYVRELDERDAGLIEAAWRNSVYRMLHQRRDILRAHYVTRSYWLATCRALGLRTREYDDVLVRAVGNFEDFVARYATPLLCIIRPKTDRLPSAA
complement(524192..524878)         PHAGE_Strept_SM1_NC_004996: gp7; CS343_02460; phage(gi32469438)                      9.38e-07            BordetellabronchisepticaMKKADDIHRPQFELKAFRCPHCSVVAQMKWSSLVSAQGSSRVGSDFLQAVCTHCEKPSLWFRHWASLGSTRIPRGGEMAWPTAIVQATQAHPDLPRDCEADFEEARQVASMSPRAAAALLRLCVQKLCVHLGCPGKNINDDIAALVKRGLPVQIKQALDVVRVVGNNAAHPGEMSSEDTSQVVNSLFGLINFIVEQMITQPKEIDRLHSQLPTGALQAIERRDNPATQ
524982..525431                     PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative terminase small subunit; CS343_02465; phage(gi589286873)     3.25e-33            BordetellabronchisepticaMARPSKYKPEFAVQAKKLAALGATDMEVAEFFGVTDRTIYRWKAEFKPFCQASKAGKSTADDRVERALYQRAVGYSYHTEKLFQHDGSVVRAKISTHVPPDVAASFIWLKNRRPELWRDKPDPTNDDNAPPPVKVVIEVVNASVPDADA
525418..526082                     PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; CS343_02470; phage(gi100002)     2.69e-64            BordetellabronchisepticaMPTLNQSQTRFLALPHKFRAFVAGFGSGKTWVGGAGLCRHAWEFPRVNSGYFAPTYGQIRDIFYPTIEEVAHDWGLAAKINESNKEVHLFAGRKYRGTVICRSMEKPGDIVGFKIGKGLIDELDVMKADKAALAWRRSLPACATPRPACTAWTPRRPRASSSSTSSSSSRSASAPSWLRSTGWCRPAPTRTARTCRKTTSRRCARATRRSLRRTCVGSTC
526085..526284                     hypothetical protein; CS343_02475                                                    N/A                 BordetellabronchisepticaAVDLAPLVDGAILGVTGRRSRAWPMSRRALRRRLYSWNGAGIGRRGAGLISRFPESGGAGMQFPGA
526271..526609                     PHAGE_Erwini_PEp14_NC_016767: holin; CS343_02480; phage(gi374531877)                 6.14e-07            BordetellabronchisepticaMQFPEEFSGGGVGGWVGAIAATVIGGGLMLRKWLSRDAVDRAGDKAEVNIIETLTIQLAVATARADAFAKERNESVREIGEQKAQIAKLTVQVEMMQAQLERMYGQTNPSGT
526641..526931                     hypothetical protein; CS343_02485                                                    N/A                 BordetellabronchisepticaMVLEGGLLILLMVGGGVGIGFFLGGLRTDAMLADQARGHAAELQRMQASYQYLVENLAPQVRQAATDAKGAAEEVQEAVTPPPRVDKPVPPWLSTP
526928..527392                     hypothetical protein; CS343_02490                                                    N/A                 BordetellabronchisepticaMSPIFKAAAPYLIGAGVLASLAAGVWMYGGHPYRACLVAERAATLERQARVERAMLEERGRADAQYRGAVLAREAAQRDLSGVRARLDMLLSEQARRRPETARAGSGPDGAGADWIGGFAACYAAYGDLAADAARWADQVNGLQGFSRGLGVAP
527506..528339                     DUF3800 domain-containing protein; CS343_02495                                       N/A                 BordetellabronchisepticaMSRELVLYCDESDISGKHFANFYGGALVESTHLHEVVSILQAAKDRLNLGAEVKWQRITENYADKYIQLMDETFALMREGKLKMRVMFTQNYFGAKQLTPAQRENGFFLLYYQFVKHAFGFRYCGGDLGAAKARIYFDKLPDTDEKCQAFKGYVSGLNWSREFRGAGLSIAEDQIAEVDSKEHVLLQCLDVVLGAMQFRLNEKHKEKPEGARIRGKRTRAKEVVYRHINGLIREIYPNFNIGISTGGEPEMRWHHPYRHWLFKPADFEIRPQYAKRK
complement(528487..529470)         PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; CS343_02500; phage(gi100034)     1.32e-80            BordetellabronchisepticaMPTFRKRGDSWRAEVARNGHRESATFPTKREAMDWANRRELELANVRAEKVTRWTLADVMQRYADDVSPEKAGERWERARIAAMKVDPIAKLVMQDIGPAELAAWRERRLKVVQGATVLREIGLLRAIWTRAKMGEWRYVDHDPWPDVIKPQDHPARKVIFLDGQAERIVDALGYAGGTPKDKRQQTAVAFLLALETAMRSGEILTLEWKHVHLARRMLHLPKSKNGDARDVPLSRRAVELLEAMSGIDEEMVFTVNAGLRDTYFQHGKTLAQVDGPTFHDARATAITRLAKKLDLLELARMVGHRDPRSLLIYYRASATDIASKLD
529662..529679                     attR                                                                                 N/A                 GGCGGGGGATTTTGAGTC

#### region 2 ####
3220097..3220768                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; CS343_15070; phage(gi56692976)     8.97e-39            BordetellabronchisepticaMCGRIAQKSAPEDYVEILWPNARLIFDDVAGPRYNIPPGTRPLTMHRLVDQAEALARLPWGYKPHGSRFFMVNAKLETIERHGWPWKLMIGAGRILVPADGWYEWKALDSGPKPAKQPYYIHGDAPLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMVDVHDRRPVALPPELAREWVDPATPVARAMEILRAGLPETAFSWHPVRQEVGSSKYQLPDAIDPI
3220816..3221109                   hypothetical protein; CS343_15075                                                    N/A                 BordetellabronchisepticaMPFRSPLTHAELRAIRERQPWNPDVLTLLWEVKRLRSMMLRAYQLSGEFRRPVGVLANCYDEYMAQLVVEPCVLERDADVAEMLNAPAKPRKGMGER
3221467..3221721                   transcriptional regulator; CS343_15080                                               N/A                 BordetellabronchisepticaMTYTAPTPQDLQRLKTELDYTGREMAALACVGEQHWRKYTGGADPREMPYPNLFHIAAALELSPEEMERVHARMRAIGAQVRVE
3222209..3222706                   PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; CS343_15085; phage(gi100018)      1.82e-10            BordetellabronchisepticaMTTNQIIRYHSGFVTSTIVSEYPDSQADAKTISSTPAVQSFNAESKPRRSKRSDRLPRRAERHIREESDAQLQADLSTARKMWATEAYAGTPDSMAGMRLAAGLSQTQLAKLVGTSQSHIAKIEAGHVRVYLDTANRLAAALEVDLERLNAILQSAQVETSSRGI
3222988..3223188                   hypothetical protein; CS343_15090                                                    N/A                 BordetellabronchisepticaMAERLKGVGSEHDPIDRIMIGIQIALTPYVVSADHTLKLTFVADGEELVAGKLRIRIKSSPAAENA
complement(3223380..3223646)       PHAGE_Pectob_PM1_NC_023865: hypothetical protein; CS343_15095; phage(gi602993996)     5.28e-05            BordetellabronchisepticaMAILSRVWGYLAAAAAAVAAVAIIFVRGRASGRAVERTEREAAVNEQAAKARKEARDVQNQVAAADDDGVADRLKSDWVRRPGGSGRR
complement(3223646..3224194)       PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; CS343_15100; phage(gi985757722)     3.16e-37            BordetellabronchisepticaMTLLQKITEGAIGPALALLPAAMDTAEARVMLLAICLQESAGVHRFQVVQGRPGVRGPARGLWQFEKGTRASRGGVWGVYLHQASRKPLEALCAARSVRFDPDAIYGALEYDDALAAGVARLLLWTDPKALPRVSDVEAAWALYLRTWRPGAYTRGTEAQRAALRSKWGSYYSQVLAFMGKG
complement(3224191..3224664)       PHAGE_Pseudo_MP29_NC_011613: hypothetical protein; CS343_15105; phage(gi215479996)     2.02e-15            BordetellabronchisepticaMQTLHRSKTIMEPSSTGIGGWAAVKLALAFGVPAALAAIIGMVIMPPRTAREFVARTVCTAFSSFIFGPMLAIAVISWRPSLIDAAHWVAKRSGTGEEGLLAMFYVLGPCMLLAGLPAWWVLGAYMRWMASMREKGFLVWVAEARAKLFGLRGGSAE
complement(3224724..3225113)       PHAGE_Sinorh_phiN3_NC_028945: tail fiber assembly protein; CS343_15110; phage(gi971758992)     8.15e-06            BordetellabronchisepticaMKEITEFLLSVYPGREWQLPQDGGLADLAWLDGPPPGDLEQQYADYVPAVAPVSVSRFQALAALLQAGLLDAVTAWANDPGTDPLHKLAFETATEFSRTSPTLAAGAAALGWSEQQLDALFDAAMQIQA
complement(3225110..3225838)       hypothetical protein; CS343_15115                                                    N/A                 BordetellabronchisepticaMAMVQQVNAALATIATDFAGPDDPGALAGPFMMWADTGNNLIKRRNAAGSAWVQEGVLLRAHAPIIPSGSLPTTDIGPIIVPGVGLMEWSGAAYAAARSFLPGEIIQQISFTTTGSTRTSTTPGNAQGVTLTVQPKSTNSILVLNCNFYAGIAPSAGNPLGSWRIYETTGTPTPIGTGLRSLYAYASGGSAMGLEAMGHILVPDLANTALTERRFLLYSWTNQATSAVRTETINYTVTEVSQ
complement(3225891..3229664)       PHAGE_Xantho_CP1_NC_019933: putative tail component protein; CS343_15120; phage(gi431811018)     3.63e-46            BordetellabronchisepticaMVVRNPFVASEGREAYCAAFLPGETLGRYCERMGVALPSRVVNVWHNGCPVPLALWQRLIPRQGDQVVIRAKGEGGGGGGKVLRTVAMLALVIAAPQLGALAFGAGTIGAAALTSGIMIGGSLLINHLLPPPTPTSAKLGQGQKYESSPTYSIQGGRNRPRPWEPMMLVFGRHKVVPDVAVDPYTEQAGDNQFLRQAFHFGLQGMDVSLTDLRIGSTLVEDYKDVQIQRSGANGKLSLIAGNPETIQGFALPQAEGWQTRTTGPDVYCLSVELASRLFRINDDGGIASRSVDIRIQYRRVGTSSWIEQGLIGAQFATHYWSLRWRDQQQTEYGSTNPADHTDGDTIPVTGGFYRWRWVPHPYQLGQPWQGIAPDPLKVPAQPGVRLTGARQEPTRRQVTWDVPVGQYEVRVIKVTADINTSRESNETAVSQIMAFQQDKADYTGQVRLAMRARATGQLNGAIDEFSAIASAQCLAWTGSAWVKQETSNPAWWYLFFARGKVEGGKRVYGGGLSDAEIDIESIKAWGAWCAAKRLTFDYVLTEKMSTAAVLQMIARAGRGTLTYQTGKLGVIWDAENLPESAMFGPFNVKAGSFKIAYTNDGTVDEIVGNFINSARGWILDEVRVKVPGATTTNNPLQLDFDGCVYEDMAGREANLLAAAQVWKRRRIQWETDVEGLVAVRGDVVSFSHDLTEWGYSGRLMPGSGGTTMKLQKKVPSAGSGTVLLRDPDGNMKTVSVVSAVGEVDELTIVSDLDGFPMPGDTGYEDCAVFDWAWQFDPLATPGRRFKITAVVPAGDGLRFEAVDDDLEYYKSESNPYQYTPPRDGALLGGVVFLITFAETIRSVVNDDVAVEIGWVLSVQTRASVTVSINGVSQPTVTTEERRLIVSAKTGDMITATVRPVTGSNTGQPRTQDYTVAGLLMPLPPVTGLTTVFRDGLTTLVWDRVVDIRQPSYEVRLGPGWANSRTVTITPSLETLAVGNGLYWVAARFQYGTTTIYGPPDSLLVSGAVLVRNVLEVINEHPSWTGDLSGGAIVHNRELTLVGTGDILTAEDVLALDDVLFYGGVSSGGAYETAESNVVDIGYPAPVRVDFEIDEYALNFGENVLAMEDVLSVDDFLNDSNRQFYHVVPQIRHAQTAGDWTEWRDYVPGTINARYFDVRLLLRTDDPLIVPFVRAFTWTIDVPDLVQQGTEVTVPVGGMRVTFPKHFHAKPNIQVTTLDAKDGDREVITNTDLEGFDIQMVNFSAPVERVINWFAQRY
complement(3229703..3230089)       PHAGE_Xantho_OP1_NC_007709: hypothetical protein; CS343_15125; phage(gi84662613)     2.86e-12            BordetellabronchisepticaMHWSDRYLNRPYVPDVGDCAAFAELVACEVLGIVPGLPGSHEDTLRAQAAQIVRVKADFADRVAQPVEGHPVLLTSRGDLFHIGVMCQLAGEWWVLHADKSFGAVIRQRLRAMTMIDYKIEGFYRWKS
complement(3230089..3230565)       PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; CS343_15130; phage(gi100049)     6.12e-13            BordetellabronchisepticaMTRQFSAKAKRNVNATSADEPLLELIEITHPDLAVPARFVNDTQDIQVEGHAFLACRFDLSIPDDQAEQVPGARLEVDNIGRELTQWLEYSQGGKGAKCRFILLLRSNPWNLEMDMTMDLTGLEITNLRVSGDLGFKNTLMQAGVAMRFDPLTAPGVF
complement(3230567..3230914)       PHAGE_Xantho_CP1_NC_019933: hypothetical protein; CS343_15135; phage(gi431811014)     4.70e-12            BordetellabronchisepticaMATLPSYVRILLPGYAERPDYGVLRTDMDGGIAKQRPQYTTPIVTREVTLQVPSRVEKLSFDAWFGKEIAGGSDWFLWEDPIDGVVKQGRIVGGALQWTSPGRVWRAAVQLETVG
complement(3230916..3233054)       PHAGE_Idioma_Phi1M2_2_NC_025471: putative tail tape measure protein; CS343_15140; phage(gi722142267)     9.67e-36            BordetellabronchisepticaMASAGSIVVDLLMRTGSFETDTDRATKRAVKQFRDMERQAKETASAINRSIGGVLSGALFGIGVSSIFSKFVTETRSAQDEQAQLGAVLRSTGEAAGWSIGQLNSMASSLSGVFSEGDINRAQTRLLSYTGVVGEQFPRALQALLDMSARTGMAVEQSAETVGRALDVPSQGLSALSRQGFRFSDEQKKLVERLEQTGRVAQAQDVVLGALESAYGGAASAARETFGGALQALQNQIDSLMTGDEGTVGGLTRSVNDLSDVLGSPETKQAFADFVTLLADVSRAIVGAANDFAEGMRAAEGFFDAVLTYGLTNPFNSNAENAAKYREELQDLYAWQKRVRESGGTTDAIDNKIRITRNRITYFDRRSGNDFDDVVRAYRDVGETGRENNEPVATMPAIAVSGSSKKGGKSRVDEGQRLIDQMEKRIALIGRETEYEKLLEQISIGAITFRTQAQKDDALAAAQTLDFLVEQNKAYEDTQKHLEALSKVTQDTGREMDEFSREAARGIQRSLGDGLYDTLSGRFDDIGKNFADMLLRMAADAAAADLARAAFGDFGRTGRWGGVVGNLLGAFSGPIGVSGSLAQGGSAIGAWDGLMRAYDVGGYTGSGGRLEPAGVVHKGEYVFDARSTQRLGVGFLESLRGYADGGFVGSSSVDPVSQRTGPRVEIVNNGTPQRVVSTTSFFDARGEVISILVDDIKKNGRAARAIQSMGRG
complement(3233055..3233279)       hypothetical protein; CS343_15145                                                    N/A                 BordetellabronchisepticaMSQDEFNRWKAFYLLNPFDDLHRYHRPAALVSSSIGGDFRERLEVLCRPIQGEHESADEATLRAFGLGRIYKER
complement(3233360..3233692)       hypothetical protein; CS343_15150                                                    N/A                 BordetellabronchisepticaMSELDNDLFVEPDVFTRPVTVADGSVRTFHFRKYSGAAYAAHISAAASRDPLVREAAVPHLVAASLCDEDGASVITVAQACRLKPTVLAALYREVTAINAPPSVEAEKKD
complement(3233696..3234172)       PHAGE_Pseudo_PMG1_NC_016765: putative major tail protein; CS343_15155; phage(gi374531661)     4.44e-24            BordetellabronchisepticaMSLKTQGTHLFLRMEDSNGPSALKIKCPTGIQGLGGPRDQIDSTCLDDLDDRQYLSGLGNPGQVSVPFNYDPRAASHQLLYTLKEEGTTLQWLLGLSDGATTPTFDSNEDFEPMTTRSGFVFDAYVADVNIDISTNTIVQGTMVLQRSGKVRPFFKAV
complement(3234232..3234603)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; CS343_15160; phage(gi374531660)     2.70e-11            BordetellabronchisepticaMLPDVFKTLSTTEMLALVGNPPRIFGFDTAPQGVKVPYLTWFVVLDDPHVNLSSVPKSDVGVVQIDCYAGPGGSAESLVERLATAARDALDAAGIVNRISFSTREPDTELFRISLQADFIRNR
complement(3235348..3235710)       PHAGE_Pseudo_PMG1_NC_016765: putative head-tail adaptor; CS343_15165; phage(gi374531655)     2.08e-39            BordetellabronchisepticaMLAYRLRHRIAFQQLVTEQDSEGRRTEVWRNVWLDSNTELVDVPAEVLTGPGREFRAAGATQAETSARINLRWFPASEIDVSRWRILWDGREYDIGSIETDRTGRREWRLRCTAGPSEGR
complement(3235711..3236055)       PHAGE_Pseudo_PMG1_NC_016765: putative head-tail connector protein; CS343_15170; phage(gi374531654)     1.16e-30            BordetellabronchisepticaMSVIDLETAKSFLDVIHSADDPKLQLLLDAAEDEALQYMDRPDFDGPWRRGVAFEPKSEQPSEPASEAPAIPKSVVLGVMLFLQAAYEAGPDDIEKYRRAGEVKLAPYRLCLGA
complement(3236046..3236699)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; CS343_15175; phage(gi374531658)     1.14e-60            BordetellabronchisepticaMSISAPGWTDKAFSAWASSGLVWLPEIGIGYYPVRPQDMPYDDSYFERYQRQADTAIGRALTETRASLVARHYAGWLLDVGIGCGQFVQARPQTCGYDINPAGVRWLRERGLYIDLYGQSYPALTFWDSLEHIPDPAAAVARAREWVFVSLPIYESAEHVLRSKHFRRDEHIWYHTDAGLRRWFELQGFACVECNAAETTIGREGVGSYAFRRVQCP
complement(3236623..3237507)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; CS343_15180; phage(gi374531657)     6.03e-78            BordetellabronchisepticaMRGLGDNIYQRGFVRNLQGPVWVDTPWPELYGDLPHVQCIRADTQLRTQKRNVERTSYSWAKVPAGQCEIRVAYGHADLARGSIVDAMRRAFRVAPKFDLPDLGPSPLAAGAEGRPVAIVRPVTVRSEWHNQARAPLPAYVAAVAAELRRRGYHVVSLADLAPGQEWLVGEAPPVDRALHQGELAVTQLLAAVAQAAVVVGGVGWIVPACIAAGTPLYTILGGNLAHNAPDRVTDAGAMDLSRTGWAWPDRPCVCAMKAHNCNKVISGFDEHFSAWLDGQGLFSLGVERPGLAA
complement(3237519..3237761)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; CS343_15185; phage(gi374531653)     1.38e-29            BordetellabronchisepticaMAAHSGARRIVLVGYDCQLTGGRSHWHGDHPKGLGNAGSLPQWAAQFGSLARRLRGIEAINCSRDTALTCFPRAALEDVL
complement(3238273..3239478)       PHAGE_Pseudo_PMG1_NC_016765: major capsid protein; CS343_15190; phage(gi374531651)     4.34e-124           BordetellabronchisepticaMSHPEKDIEQINANLKEIGDQLKSHAERADKEIKAHQKLSEETRASVDKLLTQQGELQARLATSEQLLAKVQNGGGDAAAPRSVGEQITESDEFKAFAANPRGSFRMGVQAAITTGAGSAGDLVVPDRIPGIQAPALRRLTIRDLISWGRTASNSIEYARELVFTNNADVVSENPSAGKPQSNITFEPDSAPIVTIAHWVPASKQVLSDVPMLQSYVDGRLRYGLKFKEEAQLLKGSGVGLNIDGIYTQASSYVNPGVVVQAETRIDRLRLALLQVELAEYWADGIVISPLDWAAIELTKTKDNAYLFANPRAQNLPGLWGRNVVPTQAMDASDFLVGAFGGGLAVEGWDREDVSVTISLEDRDNFIKNMATILCEERVGLTVYRPQAFVKGDFTGLEIAS
complement(3239481..3240356)       PHAGE_Pseudo_PMG1_NC_016765: Clp protease; CS343_15195; phage(gi374531650)           1.39e-106           BordetellabronchisepticaMSNRILPRAAEGRPCAAIASHLSPRALERWDAGLRAAAEDDEDRSISIYDVIGYDWWTGEGVTMKRIASALRSLGAGPVTVNINSPGGDMFEGLAIYNLLREHKGEVTVKVLGLAASAASVIAMAGDKVEIARAGFFMIHNCWVVASGNRHDLREFADWMEPFDASMADIYTTRTGLKLADVQKQMDGETWIGGSSAVEQGFADELLASDQVGKSESKASASAVRRVEAAIRAAGLPRSEAQRLIHEFKSSLSDSAGSGERDATERGLSDSAALRTTAALAASLTNIFQTR
complement(3240374..3241744)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; CS343_15200; phage(gi374531649)     6.54e-117           BordetellabronchisepticaMKPNTKRVGRVRAAILGWLGAPFGLTDADAWARLGVSSSAGVNVNNTNVLTLSSAWACGRLISETIGTLPLGMHEKTRDGRRPAPQHPLDFILGTQPNSDTVSSVHWEAVVAAMLFRGAARCEKLMVGDRLVGLEFLNPDRLAITRGADGNKEYRYTDDSGWQRTIPASRIWTIPGFSLDGKNGVSVIRYGANVFGAALATDQAATGTFKRGLMPTVWFKYPQLLKKEQREEAREMIENRLSGALNAGKPAILENGMEVGNLGINPDDAQLLESRRFSVEEVCRWFRVPPWMVGHTDKSTSWGTGIEQQMIGFLTFTLAPWLKRIEQYIAKDLMSPAERSRYYPKFAVEGLLRADSAARAAFYSVMVNNGILTRDEVRELEDRAPMGGNAAVLTVQTALSPLDDLGKNNSRALSAVEAVQKAYLGVGKVITSDEARQLVNVAGADLKIPGPSFPTP
complement(3241741..3243414)       PHAGE_Pseudo_PMG1_NC_016765: terminase large subunit; CS343_15205; phage(gi374531647)     4.86e-112           BordetellabronchisepticaMTPVQSYDWEWYGREVMAGRIPVCRLTRLAVERHYRDLETGAKRGLWFSEALAQHALESFLFLRHSKGEWAGRQFELAPWQQFWIALAFGWMRLDGTRRFREVWEEVPRKNGKSTKLAGIGLYLFTFDGEGGAEVYSAATKMEQAKITHSEAVRMVEASPHLRRSLAMRLNEIYDPRPGRADKFVPLGRDAKSLDGLNPHGGILDEVHAHPTREIYDVIKSGMGSRKQPMIWQITTAGFDLSSFGYSQHEYAEKVLEGIFEDDELLVIIYTVDHPDRWDDPVEMAKANPNLGVSVYEEQLRAMVERAKRQPSELPNVLTKRLNIWLRGGSRWVPADSWKACGDGSLSIEDFVGEPCWVGLDLAEKKDVAALCIVFKRDGRYYAFFKLYLNEEQVQAPENRHYFAWEQSGHLIMTPGNATDFDVIRRDLVDLSQQVSVQEVVYDPKFATYFAAKLRDEDGLLMVEMPQTSSRFTLPIVSVENLVLTKDLQHDANPAVAWMISNVVMRESKFSGLKHPTKEKPENKIDAAIALIQAMSRALSSDGQPDMSDYFKNPVVG
complement(3243411..3243917)       PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp1; CS343_15210; phage(gi255033733)     1.10e-27            BordetellabronchisepticaMAAQHPYPVPATGAGQGTVAPAAGVVPVEVPDPAAKLSVKEKRVWDHVTASLRDCGLIHRTDAIMLTVICRTFIRWVDAEEELSKLIKDKGSYLVATPKGYEQPHQLFYLTRTLKRELLQWLPEAALTIPSFQKVMGERAQPGQGDLFDDDPVESHRRRRTAAGMRAV
complement(3243999..3244376)       PHAGE_Burkho_phiE125_NC_003309: putative class I holin; CS343_15215; phage(gi17975232)     2.67e-18            BordetellabronchisepticaMATSSPKPCRHAGCPALVYDGSGWCDRHRPAAWSEKRGGSTKRITGRKLQRMRAELFASEPLCAECLRQGRVRLATQRDHIRPLFEGGTEAPSNVQGLCDDCHDAKSLAERQRAQGRGGVKVEAD
complement(3244664..3244915)       hypothetical protein; CS343_15220                                                    N/A                 BordetellabronchisepticaMVDASALDTDRAVAALPPEVKRTVIAAYRWEGGQQAIADKLGITRATLHRRLCHADRRIAEWFETKRQRAADIRNNLNYATYT
complement(3245046..3245273)       hypothetical protein; CS343_15225                                                    N/A                 BordetellabronchisepticaMSKGLRDQMPEVASFVDALRDVFGKASIDGQIRRGIAGEPVFYASENGHEIGTPLPGMERFKTAVRDDDGTDKMG
complement(3245610..3248021)       PHAGE_Staphy_phi7401PVL_NC_020199: virulence-associated protein E; CS343_15230; phage(gi448244658)     1.52e-48            BordetellabronchisepticaMTTHGGSKPARINRRRWLMAERIDFAAIADAALSSASVLLPQWLPGGRREGHEWRCGSIHGEPGTSFAVNLTTGVWADFASDSDRGGDLISLYAAIFMDGDQGKAARELARTLALEHRAVAEPPRKAASKRTPWQPVLPVPADAPAPPAAHSVRGRPELRWEYRACDGELLGLVYRFRTSDGGKEVLPCVWATNPQRGQAEWRWMSFPEPRPLYGLEHLRVAKHVLVVEGEKCVDAARVELSEWFDVVSWPGGGKAVDKADWSPLRGRKVVIWPDCDSKREKGDAPELERPFLPQEKQPGMLAAKAVLAQLLAQDCQVRLVEIPAIGDKADGWDVADAIADGITGRALRDWIVERLREPASDAQPSATSRGPAEATSTPHSAGAGRDHWTRRLLRKPRGGWEDCKENVAIALEDHPALRGLLVYNEFSGRIEKRRAPPWPTREGEWTEDDDRELGMWLGMTCELLLRSTRTVGEGVQIVANRNRHHPVREWLESLVWDGKDRNSTWLRDCLGVEGSEYAALVGTLWLRQAVNRIMRPGSKGDYALILEGPQGLRKSTALKRLGGEWFSDAPLDLNSKDAMMSISGVWIYEIAELDAFNRAESTRIKAFMTMTEDRYRPPYGSRFITQPRQTVFAATTNNDEYHKDPTGNRRFWSVLCRKVDLELVERQRAQMFAQAIAEVLEDKPCYPTRDEERCLIAPEQEKREIVDPWMEYIIRWTDDPERALQKEFSTADILKGAIQMAADRMDGQRSAATRVGNCMKKLGWGKRRGGKGDYRPWVYVRPESASPGGSSNNGVEDDALPI
complement(3248303..3248857)       PHAGE_Stenot_S1_NC_011589: hypothetical protein; CS343_15235; phage(gi213163945)     6.61e-26            BordetellabronchisepticaMTKHYAETQWRGALYNALRAAPDGVAGFCSWAAEFRERKIASKTLYKRLDGSDPAERMTIEDAELITEYLLRHCTTRSRARTWIVALAAQHDLAAIELDAPPSAGGWPCEITAIMEKGFTLSEQGGVLSGMLAGALRDRQISAHEAEGIRGQAHAEIRMLLRLVRNVERAAEQGATLATIGSDE
complement(3248947..3249237)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; CS343_15240; phage(gi100049)     2.10e-18            BordetellabronchisepticaMKLSTYLSEERGRQAKLAAALRCHSVLLYQWANGIRQTPAERCPSIERETGGLVTCEELRPDVDWAVLRGCLRSRADFDSALAHAYQFTDPEPPNA
