gi|00000000|ref|CP024660.1|  Escherichia coli strain RM9872-C1 plasmid pRM9872-C1, complete 89518, gc%: 47.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(7323..8861)             PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28300; phage(gi209447153)            0.0                 EscherichiacoliMNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRPRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTRRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGRITEAACWAHARRKIHDEHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVPGVIADWPVNRVSELLPWRIALPAE
complement(8911..9258)             PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28305; phage(gi209447152)            1.25e-78            EscherichiacoliMIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML
complement(9405..9476)             IS66 family insertion sequence hypothetical protein; CUB84_28310                     N/A                 EscherichiacoliMILSVFITVISGHDKPQPPGCLLD
9495..9860                         transposase; CUB84_28315                                                             N/A                 EscherichiacoliMSRSAKPRKRKPAPQRSKLPRYVVKLHDDDFFDEEDAEALRFDNFDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILAGISAGGMYCPECGTVHWPDGVPPPF
9860..11047                        IS91 family transposase; CUB84_28320                                                 N/A                 EscherichiacoliMLPRFADIFQQGNRWLNWLEKQPEGSVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCSHIKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVFTLPCQYWSLVFHNRRLLAEMSRIAADVIQEICRQADVVPGIFTVIHTWGRDQEWHPHIHLSTTTGGVTSDHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVIPDALAAEGSSKRDWNRFLDSHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLVMSGDEFMERFSWHVADKGFRMVRYYGFLSPVKRRLLEDVVYVITETVRKTAMQIRWRGMYQRLLKVDPLKCILCGGQMRFTGLKRGYRLTELVLMHEPLAQQRVCG
complement(11326..12894)           PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28325; phage(gi209447153)            0.0                 EscherichiacoliMIKQGNEQHTPRRHRATEGPADRTAGCYRLSGEITGYAREISSLRALVAKLQRMLFGRSSEKSREKIEKKIARAETRITELQNRLGEAQLQLTSMAGETAPKTSDSPVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPKLACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELHRNTMGRWVDIMGEQLRPLYDELKHYVLMAGKVHADDTPVNVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYRGILQADAYAGYNALYESGQVTEAACMAHARRKIHDVHVRHPTTVTGEALRRIGELYAIEAEIRGSPAEERLAVRKARTVPLMQSLYEWLQGQMSTLSRHSDTAKAFTYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMFFGSDGGGESAAVMYSLIGSCKLNGIEPETWLRHVISVINTWPANRVKELLPWNVTQSVN
complement(12898..13245)           PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28330; phage(gi209447152)            1.42e-53            EscherichiacoliMITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI
complement(13242..13916)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CUB84_28335; phage(gi209447151)     1.84e-10            EscherichiacoliMNSQTKKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFIASGIAWPLPDSVSLAQLDAILYANRKKELTEPQISEGTWRKERRASYSREFKVRLAKQALQPGAVVARIAREHGINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKPDECPESDPGNVPRCELHLKSGVVKLFDPLTPEMLRALIREMKGGTR
13938..14000                       porin; CUB84_28340                                                                   N/A                 EscherichiacoliMGAIVARQDNFHKTSQMGRLR
14000..14266                       DUF1449 domain-containing protein; CUB84_28345                                       N/A                 EscherichiacoliIAPWLPRDETTALTEEAFIGCMATITGYHAVAGSPCEGRFTDRFGQVHYLLLEPEAGKEFRRGDKVIIVCRLSGSRWLGELNPWPDVL
complement(14314..14526)           PROPHAGE_Xantho_33913: ISxac3 transposase; CUB84_28350; phage(gi21231087)            6.66e-05            EscherichiacoliMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLQ
14588..14761                       PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28355; phage(gi209447153)            2.47e-32            EscherichiacoliSDHGGERGALLYSLIGTCKLNDVDPESYLRHVPGVIADWPVNRVSELLPWRIALPAE
15204..19106                       PROPHAGE_Shigel_301: serine protease; CUB84_28360; phage(gi24114232)                 0.0                 EscherichiacoliMNKIYSLKYSHITGGLIAVSELSGRVSSRATGKKKHKRILALCFLGLLQSSYSFASQMDISNFYIRDYMDFAQNKGIFQAGATNIEIVKKDGSTLKLPEVPFPDFSPVANKGSTTSIGGAYSITATHNTKNHHSVATQNWGNSTYKQTDWNTSHPDFAVSRLDKFVVETRGATEGADISLSKQQALERYGVNYKGEKKLIAFRAGSGVVSVKKNGRITPFNEVSYKPEMLNGSFVHIDDWSGWLILTNNQFDEFNNIASQGDSGSALFVYDNQKKKWVVAGTVWGIYNYANGKNHAAYSKWNQTTIDNLKNKYSYNVDMSGAQVATIENGKLTGTGSDTTDIKNKDLIFTGGGDILLKSSFDNGAGGLVFNDKKTYRVNGDDFTFKGAGVDTRNGSTVEWNIRYDNKDNLHKIGDGTLDVRKTQNTNLKTGEGLVILGAEKTFNNIYITSGDGTVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKSILSLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGVDTTNDISLRNTQLSMQGHATEHAIYRDGAFSCSLPAPMRFLCGSDYVAGMQNTEADAVKQNGNAYKTNNAVSDLSQPDWETGTFRFGTLHLENSDFSVGRNANVIGDIQASKSNITIGDTTAYIDLHAGKNITGDGFGFRQNIVRGNSQGETLFTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFSTSDISISGNLSMTGNPDKDNKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHSTKSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGDSALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGENNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKITWSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGTGSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGYQFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
19411..19593                       PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; CUB84_28365; phage(gi374531886)     8.81e-08            EscherichiacoliMKNIKTHTGLLIHKEQTRRVRLHETPTAWCHTHRECYSKTTGRRCGSPDSLSRLILSSMR
19650..19862                       PROPHAGE_Xantho_33913: ISxac3 transposase; CUB84_28370; phage(gi21231087)            6.66e-05            EscherichiacoliMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLQ
complement(19910..20254)           DUF1449 domain-containing protein; CUB84_28375                                       N/A                 EscherichiacoliMSIYIDGRDCCQTGQFSQDVADGALTIAPWLPRDETTALTEEAFIGCMATITGYHAVAGSPCEGRFTDRFGQVHYLLLEPEAGKEFRRGDKVIIVCRLSGSRWLGELNPWPDVL
complement(20265..20360)           ferritin; CUB84_28380                                                                N/A                 EscherichiacoliLTDLGGKTCIFSHPVYLFLREFSLQDSRGGSE
20322..21535                       PROPHAGE_Escher_EDL933: transposase for IS629; CUB84_28385; phage(gi15801145)        0.0                 EscherichiacoliMTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMTVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVCVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
complement(21510..22063)           PROPHAGE_Xantho_33913: ISxac3 transposase; CUB84_28390; phage(gi21231087)            7.46e-12            EscherichiacoliMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTRSNNGDNNFPLKRCVRYLVYPGAVITTGYSMNPQTENKVMSGNWRLRWHISALAKHMEPGGTAPVFLESVLSVNSGCQIIVSGA

#### region 2 ####
complement(26360..27208)           PHAGE_Marino_P12026_NC_018269: putative DNA modification methylase; CUB84_28415; phage(gi399528347)     5.51e-18            EscherichiacoliMNQTLPTADLNTAGTTDIIPSMAIDRIIAQRNEGIALFMQAMECLATARRILLDASGDIFLYGFEDCVTDSVRCMDKPEEAKKNITRLADRKIWDRLMTYTGMYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRHLNASKMQTFEQELIDIWRKLSWDYRTNNPCRLGKRIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRNSIGAQYGEFLGNGDNIGELFEGEYFTVRGYQKGTVHIVFKRPDLVEKLNDIIARHYPGVLPPRV
27558..27753                       hypothetical protein; CUB84_28420                                                    N/A                 EscherichiacoliVQGAPHPARLKKNDSTTMACGGHWRTTPAQVKTEKTARHLQLKSEISSLFHSYLSRPGDYDDKIA
27787..28038                       PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; CUB84_28425; phage(gi374531851)     1.50e-06            EscherichiacoliMTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAGNV
complement(28069..28290)           hypothetical protein; CUB84_28430                                                    N/A                 EscherichiacoliMPGFFVSRSRANSMTIAERLIQKGFDEGFKKGALEVAREAACRLRDMGWTPERIQEATGLSGEELKKLFPDEQ
complement(28314..29204)           PHAGE_Sodali_phiSG1_NC_007902: transposase; CUB84_28435; phage(gi89886005)           1.90e-92            EscherichiacoliMSKKKNTTTPTPHDAAFWSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFEEPALAAKIYTKPFPLVDITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGALEKALAIACQLQKMGMTPEQIKQATGLSEAELKNITH
complement(29269..29535)           hypothetical protein; CUB84_28440                                                    N/A                 EscherichiacoliMRPSIIFATAEYVKRLREECLRENKPLHRHTRVRRQELAQDEINPDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERACH
complement(29628..30062)           PHAGE_Yersin_fHe_Yen9_04_NC_042116: hypothetical protein; CUB84_28445; phage(gi100356)     5.02e-16            EscherichiacoliMTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQLAEALVEHGDIRCLGPRCDKSAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFMEAIATESTEEVRFHYVFIDGYWKVMYRTPEGWKMKALALALRRCPK
complement(30059..30274)           hypothetical protein; CUB84_28450                                                    N/A                 EscherichiacoliMYQPQNFLPQASKTFASAPGQLPRAVAVAAPSERSTAGRNPEEVDGRRGFRPSGGATGRPGDLIQQKETFS
30296..30495                       hypothetical protein; CUB84_28455                                                    N/A                 EscherichiacoliVLWPLQPPESPQRETGRRGGGRRVDCAIRRSGLTHRQVCRERRFRRDRGGATGTVAAGLVFQTSDRAG
complement(30790..31290)           PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; CUB84_28460; phage(gi966199624)             1.45e-10            EscherichiacoliMSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRALHQDEADPELMFQDYEGFPVNMASECHINWAWVEGFRQARDEGCEEAYRLWVDDTGETDFDTFRDAWGEADSEEAFAVEFVSDTGLLADVPETVALYFDYEAYARDLFLDSFTFIDGHVFRR
complement(31247..31680)           DUF1472 domain-containing protein; CUB84_28465                                       N/A                 EscherichiacoliMRRVLCTRRNKEVAGGSAFTRPCGAWPCGFSVMWPQRRVRAVPCLHRSRASAGGMQGKMNRCGHPVPPSRLPFSGRSPAQISRSHPPTPVSRARRAAASLAPLHPCRPGKDGGTAPPGVAEHVTMEDSGMSVVAPAVYVGTWHAA
complement(31752..32069)           PHAGE_Escher_P13374_NC_018846: hypothetical protein; CUB84_28470; phage(gi410491607)     3.24e-08            EscherichiacoliMSKALSGERMAARDRYAELAWIRQQLVDAAWFVRATLEAHGTSVGNESPSALPETMPDIQTRELVMLIKRLASSLKAVKPDSSVVRAAQDWLCDRKLVDITDILR
complement(32346..33065)           plasmid SOS inhibition protein A; CUB84_28475                                        N/A                 EscherichiacoliMSARSRALIPLSAEQQAAMQAVAVTEQRRRQGRTLSAWPYASAFFRCLNGSRRISLTDLRFFAPALTKEEFHGNRLLWLAAVDKLIESFGEVCVLPLPSDAGHRLFPSVPFREGERRRQKTTLTEQKYSRQREREAERRELEYQTCFAQAQIDLAFHTPATVGSWLSRWSGVVEEHDLETIFWGWCGRFPSLSSFDRFFWQEEPLWRLIFEAGEAGRGAPVQVRALEQWMIPNKLENAI
complement(33062..33544)           recombinase; CUB84_28480                                                             N/A                 EscherichiacoliMNKTLNALICRHARDLLLAQGWPEETDVDQRNLKYPGWISIYVRLDAPRLATLLVNRHDGVLPPHLASAIQKLTGTGAELGFTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVVQVQHIFTPVAISHTLALAATLDAQGYSVNDIIHILMAEGGQA
complement(33589..34023)           DUF1380 domain-containing protein; CUB84_28485                                       N/A                 EscherichiacoliMYGTCETLCRALAAKYPGHTPLMLVIWSPEEIQALADGMDISLADHEIRTILARLEDIPEDQRTESGISSSAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPECVTRRQAVVNQARILLKNNTHEND
complement(34035..34253)           hypothetical protein; CUB84_28490                                                    N/A                 EscherichiacoliMNYSGFEDMREQVAELANTMCDLRTTMNEMEQRYSDADTLPERLVRQTLFRASHLFMKAYNEILELDYCFKD
complement(34253..34936)           PHAGE_Staphy_Stau2_NC_030933: aerobic ribonucleotide reductase B subunit; CUB84_28495; phage(gi100063)     3.92e-28            EscherichiacoliMSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRSGRTIAGDVNDDWLQPASNEMYRVLKKDALMVSFYGWHRIDRFMAVWIRAGFSVAGHLVFTKNYTSKSAYVAYRHECAYILAKGSPARPRNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNSIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDNRFEPEAA

#### region 3 ####
complement(37929..38696)           PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; CUB84_28520; phage(gi157166067)     8.28e-44            EscherichiacoliMTKNTRFSPEVRQRAIHMVLESQGEYDSQWAAICSIAQRLAVHRRLCVSGDASMSGIPGAVMVGSPALNVSVKSWNVKTVNCAAVTISFARLPLILRRPSSTASGKNNATAAAAVRGRTGMQTAYCPVNVLPLSATAVSSLTCLCTARLAEERDTALIRESSGIRWRKVRQLLQEGIRVARCIVARLMAVMGLAGVLRGKKVRTTVSRKAVAAGDSVNRQFVAERPDQLWVADFTYVSTWQGFVCMAF
complement(38810..39199)           cytochrome b562 family protein; CUB84_28525                                          N/A                 EscherichiacoliMQKSNKVIISCGMALYFLCGGITVAEELDESMQVLARNMSVLQSSMDKKELLEALDRMDDAVDESMKRLPESISPADEEGKNDYIKELQKLEKEIMLAKQKVLSGQLSDIPDSVNKMNKIRVEGHDKFR
complement(39243..41453)           Catalase-peroxidase 2; CUB84_28530                                                   N/A                 EscherichiacoliMIKKTLPVLILLALSGSFSTAVAADKKETQNFYYPETLDLTPLRLHSPESNPWGADFDYATRFQQLDMEALKKDIKDLLTTSQDWWPADYGHYGPFFIRMAWHGAGTYRTYDGRGGASGGQQRFEPLNSWPDNVNLDKARRLLWPVKKKYGSSISWGDLMVLTGNVALESMGFKTLGFAGGREDDWESDLVYWGPDNKPLADNRDKNGKLQKPLAATQMGLIYVNPEGPGGKPDPLASAKDIREAFSRMAMDDEETVALIAGGHTFGKAHGAASPEKCIGAGPDGAPVEEQGLGWKNKCGTGNGKYTITSGLEGAWSTSPTQFTMQYLKNLYKYEWELHKSPAGAYQWKPKKAANIVQDAHDPSVLHPLMMFTTDIALKVDPEYKKITTRFLNDPKAFEQAFARAWFKLTHRDMGPAARYLGNEVPAESFIWQDPLPAADYTMIDGKDIKSLKEQVMDLGIPASELIKTAWASASTFRVTDYRGGNNGARIRLQPEINWEVNEPEKLKKVLASLTSLQREFNKKQSDGKKVSLADLIVLSGNAAIEDAARKAGVELEIPFTPGRTDASQEQTDVASFSVLEPTADGFRNYYSKSRSHISPVESLIDKASQLDLTVPEMTALLGGLRVMDINTNNSSLGVFTDTPGVLDNKFFVNLLDMSTRWSKADKEDTYNGFDRKTGALKWKASSVDLIFSSNPELRAVAEVYASDDARNKFIHDFVKSWNKVMNSDRFDLNNK
complement(41562..41660)           PHAGE_Escher_PA28_NC_041935: hypothetical protein; CUB84_28535; phage(gi100080)      4.71e-12            EscherichiacoliMLPSETMIWQPEFTDKTLSRKTGAVQLRLGTP
complement(41626..42839)           PROPHAGE_Escher_EDL933: transposase for IS629; CUB84_28540; phage(gi15801145)        0.0                 EscherichiacoliMTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVCVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
43645..44622                       PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; CUB84_28545; phage(gi410491479)     7.98e-136           EscherichiacoliMDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKFFCIHYRRPRLKAPNDESKENPLPPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
44785..45012                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CUB84_28550; phage(gi209447151)     1.00e-43            EscherichiacoliMGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGSKRPICDVL
45066..45740                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CUB84_28555; phage(gi209447151)     1.84e-10            EscherichiacoliMNSQTKKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFIASGIAWPLPDSVSLAQLDAILYANRKKELTEPQISEGTWRKERRASYSREFKVRLAKQALQPGAVVARIAREHGINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKPDECPESDPGNVPRCELHLKSGVVKLFDPLTPEMLRALIREMKGGTR
45737..46084                       PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28560; phage(gi209447152)            1.42e-53            EscherichiacoliMITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI
46088..47656                       PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28565; phage(gi209447153)            0.0                 EscherichiacoliMIKQGNEQHTPRRHRATEGPADRTAGCYRLSGEITGYAREISSLRALVAKLQRMLFGRSSEKSREKIEKKIARAETRITELQNRLGEAQLQLTSMAGETAPKTSDSPVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPKLACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELHRNTMGRWVDIMGEQLRPLYDELKHYVLMAGKVHADDTPVNVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYRGILQADAYAGYNALYESGQVTEAACMAHARRKIHDVHVRHPTTVTGEALRRIGELYAIEAEIRGSPAEERLAVRKARTVPLMQSLYEWLQGQMSTLSRHSDTAKAFTYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMFFGSDGGGESAAVMYSLIGSCKLNGIEPETWLRHVISVINTWPANRVKELLPWNVTQSVN

#### region 4 ####
59655..59668                       attL                                                                                 N/A                 AGATGAAAAAACAC
complement(72273..73841)           PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28685; phage(gi209447153)            0.0                 EscherichiacoliMIKQGNEQHTPRRHRATEGPADRTAGCYRLSGEITGYAREISSLRALVAKLQRMLFGRSSEKSREKIEKKIARAETRITELQNRLGEAQLQLTSMAGETAPKTSDSPVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPKLACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELHRNTMGRWVDIMGEQLRPLYDELKHYVLMAGKVHADDTPVNVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYRGILQADAYAGYNALYESGQVTEAACMAHARRKIHDVHVRHPTTVTGEALRRIGELYAIEAEIRGSPAEERLAVRKARTVPLMQSLYEWLQGQMSTLSRHSDTAKAFTYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMFFGSDGGGESAAVMYSLIGSCKLNGIEPETWLRHVISVINTWPANRVKELLPWNVTQSVN
complement(73845..74192)           PHAGE_Stx2_c_1717_NC_011357: transposase; CUB84_28690; phage(gi209447152)            1.42e-53            EscherichiacoliMITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI
complement(74189..74863)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CUB84_28695; phage(gi209447151)     1.84e-10            EscherichiacoliMNSQTKKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFIASGIAWPLPDSVSLAQLDAILYANRKKELTEPQISEGTWRKERRASYSREFKVRLAKQALQPGAVVARIAREHGINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKPDECPESDPGNVPRCELHLKSGVVKLFDPLTPEMLRALIREMKGGTR
complement(74917..75303)           recombinase; CUB84_28700                                                             N/A                 EscherichiacoliMNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPRKRPICDVL
75431..76291                       alpha/beta hydrolase; CUB84_28705                                                    N/A                 EscherichiacoliMKITDHKLSEGIALTFRVPEGNMKHPLIILCHGFCGIRNVLLPCFANAFTEAGFATITFDYRGFGESEGERGRLVPAMQIEDIISVINWAEKQACIDNQRIGLWGTSLGGCHVFSAAAQDQRVKCIVSQLAFADGDALITGEMNELERASFLSTLNKMAEKKKNTGKEMFVGVTRVLNDDESKVFFEKVKAQHPEMDIKIPFLTVMETLQYKPAESAARVQCPVLVVIAGQDSVNPPEQGRALYDAVASGTKELYEEADACHYDIYEGTFFERVAAVQTQWFKKYI
complement(76384..76572)           PHAGE_Escher_PA28_NC_041935: hypothetical protein; CUB84_28710; phage(gi100080)      5.56e-11            EscherichiacoliMLPSETMIWQPEFTDKTLSRKPGAVQTFQRWLFFSVNTSVRVPHTCSLVKSGGLAIQSASRK
complement(76538..77751)           PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; CUB84_28715; phage(gi157166067)     0.0                 EscherichiacoliMTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
77902..78447                       hypothetical protein; CUB84_28720                                                    N/A                 EscherichiacoliMQICKSITASADCEEIIKLIYLRRYFEIVDERGDAYQLLSNLFHRRVAPLDYREPAAAGSGYPKMAPEKIQQALRDIREYVDSFDYPRLQALVSSPDEIKNLYRRCRNGYEKLQVFRLLELDQDHPVIRKFVNETYHIENEFICQLDPSRFDLIPEYVIMECDKLIALPPAANQSSVARIA
complement(78609..79025)           PIN domain-containing protein; CUB84_28725                                           N/A                 EscherichiacoliMNKTYMLDTCICSFIMREQPEAVLKRLEQAVLRGHRIVVSAITYSEMRFGATGPKASPRHVQLVDEFCARLDAILPWDRAAVDATTKIKVALRLAGTPIGPNDTAIAGHAIAAGAILVTNNTREFERVPDLVLEDWVK
complement(79022..79252)           AbrB/MazE/SpoVT family DNA-binding domain-containing protein; CUB84_28730            N/A                 EscherichiacoliMRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFLEYEKADPDFMAEREDVVSDEGRFNL
complement(79230..79367)           toxin-antitoxin system, antitoxin component, AbrB family protein; CUB84_28735        N/A                 EscherichiacoliMLPLYICHTSAYTKHMHTPGALNIPDMFHISICSGEKEHENRIDI
79340..79543                       hypothetical protein; CUB84_28740                                                    N/A                 EscherichiacoliMCGICIAVAYVDARHMFSISLFLSFLSEIRKKVVQDLPLPPHNATSRHHNMWCRIHLLMTLYVVSSP
complement(79504..79698)           hypothetical protein; CUB84_28745                                                    N/A                 EscherichiacoliMITSIHITTLLNYRRTISDRSDFSVIDGFSEVYHAEEIIISLFSAPARRITGQGDDTTYSVISR
79812..80225                       hypothetical protein; CUB84_28750                                                    N/A                 EscherichiacoliMFFIENEGQAVARTDYWQSVQAQAGYVYLSWNAGAARLLVPDAAKHLLREMRGAEYVIISKGTLHGRDALELIFEDGSDAPFVIHMLSEQCDRLLPENNQGGGFVVTVWTRGGNQLRYPGKYRVVENLPDVSPWSEH
80227..81009                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; CUB84_28755; phage(gi764159894)     6.97e-07            EscherichiacoliMQHLPAPIHHARDAAQLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQRTEKAARTAGRTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFSMPESDAVTMLKNKHA
81424..81437                       attR                                                                                 N/A                 AGATGAAAAAACAC
