gi|00000000|ref|CP025068.1|  Bordetella parapertussis strain B144 chromosome, complete genome. 4773899, gc%: 68.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1760269..1760742)       PHAGE_Synech_S_CBP2_NC_025455: MarR family transcription regulator; CWR58_08355; phage(gi712915375)     7.35e-06            BordetellaparapertussisMKTATDNRLMAMTANLMVLSRAYRSAADKALADFGLSQATAWPVILTGRLGDGVRQGALAEALGVEGPSLVRVLDQLVAAGLIERREDPQDRRARTLHLTPAGQSLREQVENVLVQLRRQLFQGIADADLETCLRVFDSLKSALGRESAAAREDYRP
complement(1760906..1761526)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; CWR58_08360; phage(gi100037)     2.82e-05            BordetellaparapertussisMASCVLTHSPPPPMTAKSPPIPAPSPEQIGLRIRALRKRQKRTLAWLSAQCGLDKGFLSRLERGEKSASVGTLHTVAGALGSSLSALLGEADPQTEIQIVRAADRHRMTTAPGPGEHIYEAITLGSSHSGLSVMVVEVGTHGAHTEAHHGGDELIFVLDGRIRVHFGGHTVLLERDDSVRFPGYLPHSLSAEGRKLARALVVIASG
1761662..1762462                   PHAGE_Synech_S_SM2_NC_015279: class II aldolase/adducin family protein; CWR58_08365; phage(gi326781951)     2.59e-07            BordetellaparapertussisMESMMSSSYTVQDKDVLRARVDREIESRVSEPQWTRAQKMALACRMLAEQGHWHGGLAGQITARGDEPGTYWTLPFGVGADEARASELILIDEDLNPLDGKSLPNPANRFHIWIYRHRPNVQCIVHTHPPAVSALSMVGEPLVVAHMDATPFYNDCAYLPQWPGLPIGDNEGEVISAALGEKRAILLANHGLLTAGSSIEESAVMALWMEQAAMLQLRARAIGPVKAVPGELAQESHDFLVKPKIQSLTFAYFARRVLRAAPDCLD
1762517..1763608                   ABC transporter substrate-binding protein; CWR58_08370                               N/A                 BordetellaparapertussisMQRRRFLTAAAAGAGSAVLAAPAVAQEAPTIRWRMPSSFPRSLDTVWGAAEAITARVSELTDGKFAIRAFPAGEIVPPLQVLDAVQNGTTECGHTAGFYYMGKEPALVFDTGVPFGLTPRQHSAWVLQGGGQALIDELYAGFNAIAIPCGNTGAQMGGWFRKQMRTPDDFKGLRIRTPGLLSMVYQKLGAIPQQIAGSDIYPALEKGSLDAVEFVGPYDDEKLGFAKVAQYYYGPGVMELGANLCLNVNRESWQSLPPRYQVALRAACAMAGEELLAKYDAYNIPALKRLVGQGAKLQSWSPEIMAAMQKATREVLEEYAGKNPRFAKVLESWRAFRADQLLWASVNDGVAERYLPATRENGL
complement(1763630..1764073)       PHAGE_Escher_Seurat_NC_027378: hypothetical protein; CWR58_08375; phage(gi100036)     1.71e-14            BordetellaparapertussisMISVTRRLEFDAGHRIPDHNSQCRNLHGHRYVLEVTLSGDVVQAPGASDNGMLMDFSEIKRIARTHIVDVWDHAFLVYEGDHAVRGFLDTLPDHKTVVLDRIPTAENLASIIFATLAPHYHGHYGADLRLTRVRLYETPNCWADCGS
complement(1764102..1764734)       PHAGE_Escher_Seurat_NC_027378: hypothetical protein; CWR58_08380; phage(gi100043)     3.34e-22            BordetellaparapertussisMAYSVKELFKTLQGEGAQAGRAAVFCRFAGCNLWTGRESDRAGAACTFCDTDFVGTDGQGGGKFADAAGLADAIAACWGEHPADRYVVFTGGEPLLQLDEALLQAVHAQGFTVAIETNGTLPPPPGIDWICVSPKGRAPVVVERGHELKLVFPQADARPEAFAHLAFEHFFLQPMDGPARAAHTAQAVQYCLDHPQWRLSLQTHKYIGIP
complement(1764792..1766012)       PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; CWR58_08385; phage(gi145708108)     0.0                 BordetellaparapertussisMLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAAFPGNAR

#### region 2 ####
2139082..2140329                   PROPHAGE_Shigel_301: serine protease; CWR58_10175; phage(gi24114232)                 7.11e-09            BordetellaparapertussisMKPTSILARLPRYLGACALAALAVAPLAPAQAQTPLPAGLGAAEVRQYLSGLPSDALRQQASWLAPALLRPYLSGLTDAQLRQYVQALTPGQITQGLAALTPAQRARLQREFERQARRQVQQAVRAEVAARSARAVAMGQSASMLLLDAEMGTLAQRQGDLRRGHDEGAFWARGSANRFKVDTPDTPAFDLRVEYLTLGADHGWRLDTGRLYLGAYAGVSRARMDDNDIMHGRIESRFLGTYLTYVDNGGFYVDAVSKLGRIDESVSFDLPLELGDYDDDISHTTYTGSVEAGYHFRLPQRWFVEPQAQVIYSRSSQTSVQGRAGVRAGRDFTLAGGATLRPYVSASYLHEFSHDDSVDFGGKSYDAELPGSRWQLGAGAALDVGAHRAYADLRYGHGANISQDLSLNIGYAYRF
2140404..2140685                   hypothetical protein; CWR58_10180                                                    N/A                 BordetellaparapertussisMVYEDFFWFMAALVALALVGGALFGRLGRLAHSVIAMLGLAIAVGVAVLLGARGEDVGPYAPLLAIAAFMFCLMIGGAATLVTRRVRRRHLTH
2140727..2141047                   hypothetical protein; CWR58_10185                                                    N/A                 BordetellaparapertussisMDISSHLLAELANGVCLETRVDGQTIGTYVVLGPADLDAIADIVPRQRVEEGADIHAAAVDSVDGAQMEIDQVIENMNPGDVAVFFCADGDCYGAALDLLGLPVDE
2141354..2141557                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CWR58_10190; phage(gi13095918)                   4.05e-21            BordetellaparapertussisMETGVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKGPQATKIQIL
2141641..2142207                   DUF924 domain-containing protein; CWR58_10195                                        N/A                 BordetellaparapertussisMSDSMAGPAALPDAATVLAFWREAGPARWYAKDEQFDRTFTMRFEAAHMAAARGELMAWSASAEGVLALLILLDQFPRNAYRGTGHMFATDGLARQICEQAIAAGLDRQGPEDLRQFYYMPLEHAEDLAAQEQCVSLMAPLHAETLRWAEIHRDIIARFGRFPHRNTVLGRATTVEEQQFLDQGGFSG
2142553..2142759                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CWR58_10200; phage(gi13095918)                   4.95e-21            BordetellaparapertussisMATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEIRSEGYKSLQENQRVSFEVGQGPKGPSAKNIKVIA
complement(2142857..2143435)       PHAGE_Caulob_CcrColossus_NC_019406: UPF0114 protein; CWR58_10205; phage(gi414088293)     1.56e-32            BordetellaparapertussisMARKPPMHPIQEPRLGPLPALIFSSRWLQLPLYLGLIVAQGVYVLLFLKELWHLVTHTLSFGEQEIMLIVLGLIDVVMISNLLVMVIVGGYETFVSRLRLEGHPDQPEWLSHVNASVLKVKLAMAIIGISSIHLLRTFIEASNLGSPNSRFTETGVMWQTIIHVVFILSAIGIAYVDRLTSQSVGHGAHPSH
2143614..2144924                   trigger factor; CWR58_10210                                                          N/A                 BordetellaparapertussisMQPVVETLSGLERRVDLAVSVAEVEKEVQAQLKRVGRTAKVAGFRPGKAPLAMLERSHGPGIRYDVINSLVGRAFEQAVDGAKLRVAGSPTLTPKTEGVADDTLAFTATFEVYPEVTVPDLSALAVTRYDTPVTDAEVNQTLDVLRKQRAKFETREGRASQDGDRVVLDFAGTIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAALGLKAGESKVFPLKFPDDYQGKEVAGKTAEFTVTVKEVAEGVLPEVDAEFAKSLGQAEGDVEKLKADIRTNIEREVKARLQGRTKGSVMDALVEAGKFDVPKALVDSDVEGRIAAAREELKQRGVPNADSVPMPAEVFSTESERRVRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNYEQPAQVVSYYLADRQRRAEIEAIVLEDNVVAHVLENAKVADEKVPFDQLMGMA
2144927..2145580                   PHAGE_Bacill_G_NC_023719: gp257; CWR58_10215; phage(gi593777713)                     1.14e-61            BordetellaparapertussisMQRFTDFYAAMHGGSSVTPTGLGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDNTANLVVAQLLFLESENPDKDISFYINSPGGSVYAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSRAQT
2145685..2146989                   PHAGE_Bacill_G_NC_023719: gp258; CWR58_10220; phage(gi593777714)                     1.32e-162           BordetellaparapertussisMPEKKGSADAKVLHCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIREEAQATARAAIRSELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIKGDEVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGELFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNALVKQFQKLFAMEGAELDVRPDALKAISRKALKRKTGARGLRSILEGALLDTMYDLPSQGNVSRVVLEANAVEGDGKPLLIYADESEAASGEKAGRGEVRDAAA

#### region 3 ####
complement(3036813..3037220)       PHAGE_Pectob_phiTE_NC_020201: endolysin; CWR58_14460; phage(gi448244889)             4.97e-35            BordetellaparapertussisMGFQLSARDRQRLAGVYPDLAAVVEAAAGAYNGRFTVLEGARSAQRQSRLLAQGVSQTLRSLYIPQPDGWAHAVDLAPLVEGTISWEDWASFKRLAEVMKESAARLEIPLGWGGDWTTLKDGPHFQLPRGWRGKA
complement(3037557..3037934)       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; CWR58_14465; phage(gi157166006)     1.57e-30            BordetellaparapertussisMNMEIRPVRTEADYKSALKEISRLMESDPELGTPDGDRLDVLATLVQAYEARHYPIDLPDPVEAIKFRMEQGGLTPKDLEPMIGKRNRVYEVLNRKRGLTLPMIWRLHTELGIPAESLIRPPAHA
complement(3037931..3038233)       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; CWR58_14470; phage(gi157166007)     2.55e-23            BordetellaparapertussisMRVIALSTLRQFWEKHPAAEQPLKAWVDEASRARWAPPADLKAQYRSASVLKNRRVVFKIKGNDYRLIVAVAFKLGIVYVKFVGTHVEYDRVDAETVEME
complement(3038376..3038454)       tRNA                                                                                 N/A                 GGGCCTCTAGCTCATGCCTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGAGTTCGACTCTCGGGGGGCCTACCA
complement(3038464..3040632)       PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; CWR58_14480; phage(gi331028036)     5.28e-39            BordetellaparapertussisMKVAKPAAKTAAKKTATKTVAAKTAAADKPAKTTKARAKKAEDKLADLVGAARPAPSGRRPGRPAKNANNDSDAFDDSMDGEGEVLPDLKPPKRGGKRGKADPKDLIVRGPVSPEEYEARRNRLKQLIKLGKDRGYLTYGEINDHLPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTTVDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILAHITRVREGQAQIDEVVDGLVDPEDGEEYAGAGVTADEDEADDGPAGGMSSKQLEDLRVKALAKFDEVSKQFEKMRQSYEKEGYKSDAYLKAQDIIQTELMGIRFTAKMVEKLADTLRAQVEEVRQLERAVLHTCVDRAGMPRSHFLKAFPGNETNLQWVLDEVAAAHAYSETLERQIPAVQELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDDSHLGDFIEDTATLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLEGQ
complement(3041425..3043476)       PHAGE_Helico_phiHP33_NC_016568: DNA primase; CWR58_14485; phage(gi371671350)         2.20e-52            BordetellaparapertussisMIPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFGCGAHGSAITFLMEHTGASFPEAVRTLAAAVGLTVPEENRSPRQQAESARRKAEVSRHTQVLDAAQAHYLRQLRGSPQAIAYLKQRGLTGEIAAHFGLGWSGTDRHGLSHVFDNYEDPVLVEAGLVIESEDGRRYDRFRERVMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLFSKGHELYGLWEARLAIRQEGQVVVVEGYMDVVGLAQQGIANAVATLGTSTTPDHVKKLLRASDKVIFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVRELGAEAFRTRLGEAVALSRFLLDELASRHTMGEAEGRASCLHEAKPLLAAIPECALRVQIERELARLVQLTPEEMAQVLAQQPARPLASAAAPAQASAPAAGREGGPGHADEAPPDWAFEPVHDFEPDAYSVGAVDGEPGMPAAGGWQERKGRQGGDWKGKKGDWKGKKGDWKGKKGDWKGRRDNDTGGYEGRRTMPSLARRLLCLLLAHPELVDTMGDQQLEVIDHGPHLGLVRDLILLAQTSGARHVGALMEAADPDSDLYVVLKGLRADVLAQEDLPHPQTEWDDALRRMEFDAARAEMAKLAESGLATDEARRRYLELSSRIMVLKNAGAH
complement(3043496..3043708)       PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; CWR58_14490; phage(gi460042545)     3.46e-05            BordetellaparapertussisMPIVRLKENEPFEAALRRFKRTIEKTGLLTELRSREFYEKPTAERKRKHAAAVKRHYKRIRSQQLPPRLY

#### region 4 ####
3732678..3733433                   PHAGE_Bacill_G_NC_023719: gp350; CWR58_17540; phage(gi593777806)                     3.55e-23            BordetellaparapertussisMARLDNADATSMTGRPPLIMNDQRKSSRASCRASANYLRAEAALPRRRYPQPPVSGAATLQELQAQVDTLELENARLRRLALTDDLTGAYNRRYFATMLRDALRERVRGGGLALCLFDIDNFKTINDRHGHFAGDYLLRRVALAARRCMRRTSDDLCRVGGDEFAAVLSAPSASAALAQAQRVLDAIRAIAPLDTPHGPRHVTATFGLAWIAPGVSLTWEQAYSDADRALYRAKQAGKNRLHLIASRTAGA
complement(3733449..3733610)       hypothetical protein; CWR58_17545                                                    N/A                 BordetellaparapertussisMENDPLAIIHIHEDGGATLMGTDYRVEPEGVASMIRQGERFFWIEPPVISQEG
3733779..3734294                   PHAGE_Myxoco_Mx8_NC_003085: hypothetical protein; CWR58_17550; phage(gi15320584)     1.95e-10            BordetellaparapertussisMTPGPRTSPLVFASASIQAIKAGKQRQARRIVKPQPPPAATLWYCDPAHAERWIAATARPDDATPAQTVSKWLVCPYGKPGDLIDLAHESGQPFGRAILMGVRIQRLQAINEADAAAEGFAAASRLDEFLPETPPQAAFALAWCERYGARAWAANPWVWVLEFRLLNQNGH
3734567..3734884                   virulence factor; CWR58_17555                                                        N/A                 BordetellaparapertussisMKKWFVAAGIGAAGLMLSSAALARVDIGVSIGIPGVVYPAPVYVAPAPVYAPPPVVHYPAPVYVRPQVVYPAPVYYGGPRYYKGHRHYDRGHRGHRGHGRGHWRD
complement(3734943..3736163)       PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; CWR58_17560; phage(gi145708108)     0.0                 BordetellaparapertussisMLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAAFPGNAR
complement(3736387..3736635)       hypothetical protein; CWR58_17565                                                    N/A                 BordetellaparapertussisMTSRMIGDFRVRCTVVQEEGNQYSVQICTRRVGGNAPEKCWTVPGQVSYQDREDAERTSQQIFERINGVRFNGEPEFAHASA
complement(3736914..3738269)       PHAGE_Bacill_G_NC_023719: gp287; CWR58_17570; phage(gi593777743)                     2.98e-09            BordetellaparapertussisMLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQALPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASSDENVEVRRWLPGAADERGNPAALGFEVRDHVAVGEPLGLDFDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPKVDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPEHSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQNKPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP
complement(3738316..3739695)       PHAGE_Bacill_G_NC_023719: gp70; CWR58_17575; phage(gi593777538)                      1.12e-96            BordetellaparapertussisMRVGSARVFFLLSMSNDLFASDPAHRPYVPLAERLRPRTLSDVVGQSHLLGPDKPLRVAFDSGRPHSMIFWGPPGVGKTTLARLMADGFDAQFIAISAVLGGVKDIRDAVVTAQVAQGQGRRTILFVDEVHRFNKSQQDAFLPYVESGLFTFIGATTENPSFEVNSALLSRARVYVLQSLSAEELMQLVDRAVAALNEGLEDGQQIRFEAEAREQLAAWADGDARRLISAVEVVAESAQAAGRDSVDAAWLETSLSQNLRRFDKGGDAFYDQISALHKSVRGSDPDAALYWLARMLDGGADPKYLARRLVRMAIEDIGLADPRATELAVNGADIYERLGSPEGELALAQAVVYMACAAKSNAVYNAYNAARKFAAEHGSAPVPLHLRNAPTKLMKQLGHGKAYRYAHDQPHAYAADEQYFPDGLNPTFYRPTDRGLEAKIQQKLAFLDELDAQERARKR
complement(3739758..3740390)       outer-membrane lipoprotein carrier protein LolA; CWR58_17580                         N/A                 BordetellaparapertussisMHMIRRAAGALAVFAVAALAAAPAWAATAQEQLDTFVATVKGATGSFKQSTVSPQGATQPTQSGTFAFQRPGKFKWAVQLPYEQLIVSDGKQVFQYDPDLAQVTVRQVDQAIGTSPAAILFGAGQLGQAFAVSALPDRDGLQWLRAKPRNADAGFSQVDIGLRDNQPARIELVDAFGQTTRVELSNLLPGAVPASEFQFTPPQGVDVVKM
complement(3740390..3742750)       PHAGE_Mycoba_Minerva_NC_026584: FtsK; CWR58_17585; phage(gi764159392)                2.81e-97            BordetellaparapertussisMPRISNATPRASRNTRNGPSPFQARISALLREARWILFAALAAWLTLVLATWSPADPGWSHSVSGDAIHNGGGTLGAYLADILLYLFGFSAWWWVVLLLHRVRAGYRRLASNLRVTSGKQPDALPRVHWEEGIGFVLLLTGSLGIEALRLYSWGMHLPGGTDGESGAGGVIGQMLAGWLSRGVGFTGGTLALLVLLAVGLSLFFSFSWLQIAERVGSWLEGLVRRVRDSYAAREDRKVGEVAKAVRTEQVVAKQEKLVHEQPVRIEPAITVVPRSDRAEKEKQQSLFAPPAGESDLPAIGLLDPPLQNQETVSAETIEFTSRLIEKKLADFGVSVVVVAAQAGPVITRYEIEPATGVKGSQIVNLAKDLARALSLVSIRVVETIPGKNLMGLELPNPRRQMVKLSEILGSQTYHASHSVLTMALGKDIAGNPVVADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKADASHTRLILIDPKMLEMSVYEGIPHLLAPVVTDMRHAANALNWCVGEMEKRYRLMSKMGVRNLAGYNSKIRDAIKREEPIPNPFSLTPDAPEPLQALPHIVVVIDELADLMMVVGKKIEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQMGAETLLGQGDMLYMPPGTGLPVRVHGAFVHDDEVHRVVEALKAQGEPNYIDGLLEGSEGETGDGLSSVTGMGDAESDPMYDQACEVVLKHRRASISLVQRHLRIGYNRAARLLEQMEQAGMVSPMQSNGNREILVPAREEA
3742792..3743751                   PHAGE_Bacill_G_NC_023719: gp344; CWR58_17590; phage(gi593777800)                     2.92e-67            BordetellaparapertussisMSTPKHAKVLILGSGPAGYTAAVYAARANLSPALITGLAQGGQLMTTTEVDNWPADVQGVQGPDLMQRFLQHAERFNTEILFDHVAKVDLSRRPFTLTGDTGNLYTCDALIIATGASAKYLGLASEQAFMGRGVSGCATCDGFLYRNKDVVVIGGGNTAVEEALYLSNICRKVTLIHRRDKFRAEPILVDKLMDKVANGNMELKLFHTLDEVLGDDSGVTGVRIRSTETDATEDLDVAGCFVAIGHQPNTGIFEGQLEMKDGYIITKSGLSGMATMTSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRWLENAGQ
3743738..3744424                   DNA mismatch repair protein MutS; CWR58_17595                                        N/A                 BordetellaparapertussisMRGNKTGLADLKRLHEQVRETRARAEAAEREAAARASAAAPEADVAAFRRAVQAATPLKPSGRLANRRPDATPATAAAVASRRAAALGEAAPRADAGVSDASDIGALLTDGGTAYVRAGVAPDTARNLKRGQWRVGAELDLHGLRVEQARHAVLSFLDECLEHGIRCVRIVHGKGYGSQGLEPVLKDKARTWLVQKADVLAFSEAPERGGGAGALLVLLRQAEAGGRP
3744421..3744753                   PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; CWR58_17600; phage(gi311992758)     2.49e-10            BordetellaparapertussisMNSWIHLSVAIVAEIIATSALKSSEGFTRLLPSLVTVAGYAIAFYFLALTLRVIPVGVAYAIWSGVGIVLISLVGALLFKQHLDLPAIIGIALILAGVVVMNVFSKSVGH
complement(3744767..3746833)       PHAGE_Aeromo_44RR2.8t_NC_005135: hypothetical protein; CWR58_17605; phage(gi37651715)     6.19e-08            BordetellaparapertussisMPFTGNTPQEFEQRLRRIYTLYTLGFILLVLLLALAELMGMARSWIGYVFLLVTVSLYACIGIVCRTSDQVEYYVAGRRVPAFYNGMATAADWMSVASFIGVAGTLYLTGYGGLAYIMGWTGGYVLVALLLAPYLRKFGQYTIPDYLGARYGGKLPRLAGVFCAILCSFTYLVAQIYGVGIITTRLTGISFELGIFVALGGMLVCSFLGGMRAVTWTQVGQYIILVIAYLVPVVWLSVKHTGMPVPQLSAGTVLQEITEKEVYLAHDPGERAVRQLWRSRADEMDERLRALPDSLAHEKDRLRGRLAQLNASDAPMVEIRSLERELASYPVTVEEARTLWSQARAAFEARATPPVPHAEPFPAEDPRERENMRINFLALVLCLMLGTAGMPHILMRSYTTPSVGEARRSVCWSLLFILLLYFMAPALALLVKYEVYTQVVGTSFLSLPSWVHAWSAVDIHLLDVFDVNRDGIVQLGEISMGADVVVLAMPEIGGLPYVVSGLVAAGGLAAALSTADGLLLTLSNSLSHDTWYRVVSPRMSAGRRVMVSKILLLLVAFGAAWVAARKPADILFMVSAAFSFAASSFFPALVMGVFWRRANKWGATLGMFAGLAATFAYMAHTHPWLREWVFGVTRAEPVDLWWGIQPVAAGVFGAPMAFLTIIVVSLLTPRPDSATEALVDYLREPGGR
