gi|00000000|ref|CP025078.1|  Enterococcus faecium strain LS170308 plasmid unnamed, complete 56373, gc%: 35.30%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
20106..20128                       attL                                                                                 N/A                 GGTTCTGTTGCAAAGTTTTAAAT
complement(20160..20846)           PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CWE29_13560; phage(gi985761246)     7.03e-91            MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
20856..20914                       attL                                                                                 N/A                 TATCTTTTTCTATTATTCTACCTTATTTGATAGTAGATTTAAAACTTTGCAACAGAACC
complement(21273..21485)           hypothetical protein; CWE29_13565                                                    N/A                 MIPLYRIVLIVGMELKTLKKEQLFKVKERHNQLLCSKTGTMNIEYRTEYLELTNQTDFLLIRKQQEQEKN
complement(21506..22357)           hypothetical protein; CWE29_13570                                                    N/A                 MKSDDWIEHTWLPLKRNSKRKKFWVLQLWPLGKLCSYGARLILDLTVYSIGVFGTAYYLINDPNRIAASDIFTVLMTLIFVMLLSIFTQLVMQFTRQKLTAGKLFKSLFDLIVVNAILATLIKQIEQSGRTTKGVKDFLLTFIHFVNGHMYLFEVGIILFFVGYVSTKLIKRSIEKEIEIDLIPTLLGYEYNVDFGRYDELINTDIVHTSIHESTVKGIRSILKNGQEMKAIDRRKEIYNFYEVEASLRYGIGKLWLDGSNIRQNKPYIFWNSSDLELPMKDK
22442..22454                       attL                                                                                 N/A                 AAGTAAATAAAAA
complement(22458..22754)           type III secretion system protein PrgN; CWE29_13575                                  N/A                 MSLKNYVYSHPVNVFIIGRLGLSVEVFCELYGFKQGTLSSWVTREKTVASLPIEFLHGLSLASGETMDQVYDCLCVLEQEYIEYKIANELRKRKKYIQ
complement(22889..24382)           replication protein RepR; CWE29_13580                                                N/A                 MLSEIYSAILKNGLRTYKYRNSTMKPAGHIDSSRSGAIFAYRSKQLMNVGRGMVITSEEAILENEKKLTHWTPNTYRFGTYADDYRTVVKGHSEKNLSQINTFVVDIDSKENHQGEIILACLDQVGYMPTLILESDHGYQVYFVLKTPGYVTKKSNFKVIDVAKKISKTIRLQLAEKLSGVDLGCNHFGIARFPQENNIVFKEMNYQYSFADWIQWSMKLESDQKTKEDRERKLIVFPEKKEIRQVDEPWFDMLLHKANIVGGEGRLGRNNVIFTLSLAYYSSGYALDTCEYNMFTFNERLQEPLSEAELVKIVRSAYSGNYQAASREFIIELCQQWVSPTLKNNDLFIQRRGWWKFKKPRDQRKYSHKNEWKEDLLAYLSEKSLASEPYLNLSKKELASQLTMPKRTLDKILNELREENKVFYKVTRGRNGGMIIASVKTLFARVIQLSKEKRLDYSTRITEVFGLNESLVEETFRQLSTPLNPLKEVNLFEVDTG
24994..25947                       PHAGE_Entero_EF62phi_NC_017732: chromosome partitioning ATPase; CWE29_13585; phage(gi384519759)     1.74e-18            MENLRTAFKTSDKLGKVVMLTGRKGGIGKTTDNDLLAIVSSQLFEKDVLLIDYDQQRNTTSNIGSTYQITSFDRSMSAAIKKGDWVSGITQVSPHLYIMAGSPGSEELNEYLSEKYPDRRKRSLAFIKPLEELRKNFDYIFIDCPPSTDNVVRAFLTAADYIIAMQELKRYAMEGTEDFINKVLVPIVTNFEESHLQIIGILPVLFSVRRSSQHANYQKTIDKYGESNIFKSIVKGSDRLEMYGENGIQLNDYVDRRWWAIFADIFTELEERIEYYEQHGDIEGFDYTPKYADSMANHILPLGKEIKLNGIITNEQR
25919..26194                       type III secretion system protein PrgO; CWE29_13590                                  N/A                 MALLPTNKDKKKIGAEDISIKDDINVELGERKYTAKERKPVQVDPPVLKTIRDLSYAKDIPMYEIVKLAMDAYVDTLNDEERIIYNRRSKD
26416..27102                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CWE29_13595; phage(gi985761246)     7.03e-91            MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
27230..28189                       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; CWE29_13600; phage(gi588498272)     5.09e-41            MTYTHLTTDELVMIESYYHQNIKIVKIAEYLKRSRTPIYNVINFLKEGHTALEYYQQYKENKKRCGRRNIVLPKKQQSYIKEKIAQGWTPDVIIGRKEKPISCSVRTLYRQFKEKVFDESTLPMKGKRKPNGHQERRGKQAFKRNIVERETDYPTFKEEFGHIEGDTIVGIHHKSAVITLVERLSKIIITLKPEGRKAIDIENTLNHWFGSIPRHLFKSITFDCGKEFSNWKALSNQHDIAIYFADPGTPSQRALNENSNGLLRKDGLPKNMDFNQVDQAFISSVANKRNNIPRKSLDYQTPLEVFMSYMNEDILSSLI
28525..28537                       attR                                                                                 N/A                 AAGTAAATAAAAA
complement(28622..29194)           PHAGE_Clostr_phiCD38_2_NC_015568: recombinase/resolvase; CWE29_13605; phage(gi333798162)     1.09e-49            MTKYGYARVSTASQSTKEQIQQLLENGVEKKNIFSEKFTGTKRDRPKFNQLLAGLKPGDEIVVTKLDRFARNTREALEIIEPLLDDNVTIKVLNLGTIENTSMGRMVTRTLLSVAEMERDMIVERTQEGKMFARKNNPNFREGRPKATITPKKRHAYELLTSGKSYKEVEAITGFSRSTLFRIKKKIEES
complement(29210..29815)           cell filamentation protein; CWE29_13610                                              N/A                 MILENKLGLTNQVELAKVEEKLSKQKAKELYDCGKINEIEVGTFKGLSEIHEFLFSDIYDFAGKIRSVNIAKGNFRFAPVMYLEHSLQHIDQMPQTSFEEIIKKYVEMNIAHPFREGNGRSTRIWLDLILKEELQKVVDWNLIDKADYLSAMERSPINDLEIRYLISNALTDKIDDRELYMKGIDVSYFYEGYSEYTIDDL
complement(29902..30012)           IS30 family transposase; CWE29_13615                                                 N/A                 TEPFIEYRKHFLYSILSSFKFSIDYIYCEFCRGSET
complement(30059..30745)           PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CWE29_13620; phage(gi985761246)     7.03e-91            MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
30814..31527                       PHAGE_Clostr_phiCDHM19_NC_028996: putative cell wall hydrolase protein; CWE29_13625; phage(gi971763891)     2.68e-19            LPPNSLSTEESIKQGVKYFSELLASSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIPINGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIMDEALKYEGWRYVYGGASPTTSFDCSGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLGNNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ
41572..41630                       attR                                                                                 N/A                 TATCTTTTTCTATTATTCTACCTTATTTGATAGTAGATTTAAAACTTTGCAACAGAACC
42169..42191                       attR                                                                                 N/A                 GGTTCTGTTGCAAAGTTTTAAAT
