Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 6 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              9.9Kb                    incomplete(10)                NA                                           1009435-1019415          0                        11                      8                                1                                81.8%                            2                                no                               2                                PHAGE_Escher_RCS47_NC_042128(6),PHAGE_Entero_P1_NC_005856(2),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Staphy_SA1_NC_027991(1),PHAGE_Synech_S_IOM18_NC_021536(1),PHAGE_Synech_S_ShM2_NC_015281(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Bacter_B124_14_NC_016770(1),PHAGE_Cyanop_P_RSM1_NC_021071(1)   7                                54.54%                           50.01%                        
                                  2              25.9Kb                   questionable(90)              integrase,head,transposase,tail              1486175-1512152          0                        39                      32                               3                                89.7%                            4                                yes                              16                               PHAGE_Entero_HK630_NC_019723(14),PHAGE_Entero_DE3_NC_042057(13),PHAGE_Entero_lambda_NC_001416(13),PHAGE_Entero_HK629_NC_019711(10),PHAGE_Entero_mEp237_NC_019704(4),PHAGE_Stx2_II_NC_004914(4),PHAGE_Entero_cdtI_NC_009514(4),PHAGE_Entero_VT2_Sakai_NC_000902(4),PHAGE_Escher_PA28_NC_041935(4),PHAGE_Stx2_vB_EcoP_24B_NC_027984(3),PHAGE_Entero_HK106_NC_019768(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Salmon_118970_sal4_NC_030919(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Mycoba_Bxz1_NC_004687(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Mycoba_MoMoMixon_NC_023733(1),PHAGE_Mycoba_ArcherS7_NC_021348(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Mycoba_Alice_NC_028986(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Bacill_BMBtpLA_NC_028748(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Mycoba_Lukilu_NC_041901(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Shigel_Stx_NC_029120(1)   12                               35.89%                           50.18%                        
                                  3              34Kb                     intact(150)                   integrase,portal,terminase,capsid,tail,lysis,lysin,plate     1584460-1618469          0                        47                      42                               3                                95.7%                            2                                yes                              5                                PHAGE_Salmon_Fels_2_NC_010463(38),PHAGE_Salmon_RE_2010_NC_019488(34),PHAGE_Salmon_SEN1_NC_029003(12),PHAGE_Erwini_ENT90_NC_019932(12),PHAGE_Entero_186_NC_001317(12),PHAGE_Entero_PsP3_NC_005340(11),PHAGE_Salmon_SP_004_NC_021774(5),PHAGE_Burkho_KS5_NC_015265(4),PHAGE_Burkho_KS14_NC_015273(4),PHAGE_Escher_pro483_NC_028943(4),PHAGE_Entero_WPhi_NC_005056(3),PHAGE_Ralsto_RSY1_NC_025115(3),PHAGE_Escher_P2_NC_041848(3),PHAGE_Ralsto_RSA1_NC_009382(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Pseudo_phiCTX_NC_003278(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Salmon_SEN5_NC_028701(2),PHAGE_Entero_P2_NC_001895(2),PHAGE_Escher_D108_NC_013594(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Erwini_vB_EamP_Frozen_NC_031062(1),PHAGE_Erwini_Ea9_2_NC_023579(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_YMC11/06/C171_PPU_BP_NC_030923(1),PHAGE_Burkho_phiE202_NC_009234(1)   38                               80.85%                           50.95%                        
                                  4              52.3Kb                   intact(120)                   integrase,protease,envelope,head,tail        1879877-1932237          3                        77                      60                               10                               90.9%                            7                                yes                              33                               PHAGE_Entero_DE3_NC_042057(19),PHAGE_Entero_HK629_NC_019711(14),PHAGE_Entero_lambda_NC_001416(14),PHAGE_Entero_YYZ_2008_NC_011356(13),PHAGE_Entero_BP_4795_NC_004813(13),PHAGE_Entero_HK630_NC_019723(12),PHAGE_Phage_Gifsy_1_NC_010392(8),PHAGE_Entero_HK225_NC_019717(8),PHAGE_Stx2_c_1717_NC_011357(8),PHAGE_Entero_cdtI_NC_009514(7),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Entero_mEp237_NC_019704(6),PHAGE_Entero_933W_NC_000924(6),PHAGE_Entero_N15_NC_001901(5),PHAGE_Entero_VT2_Sakai_NC_000902(5),PHAGE_Escher_PA2_NC_028449(4),PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Stx2_II_NC_004914(4),PHAGE_Escher_P13374_NC_018846(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Entero_mEp235_NC_019708(3),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Escher_phage_NC_004913(3),PHAGE_Entero_Min27_NC_010237(3),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Pectob_ZF40_NC_019522(3),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Escher_TL_2011c_NC_019442(2),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Salmon_37_NC_029045(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Salmon_FSLSP030_NC_021779(1)   19                               24.67%                           50.68%                        
                                  5              27.2Kb                   intact(110)                   integrase,tail,plate,transposase             1941460-1968686          0                        32                      27                               3                                93.7%                            2                                yes                              16                               PHAGE_Shigel_SfIV_NC_022749(12),PHAGE_Entero_SfV_NC_003444(9),PHAGE_Entero_SfI_NC_027339(7),PHAGE_Shigel_SfII_NC_021857(7),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Entero_cdtI_NC_009514(6),PHAGE_Salmon_ST64B_NC_004313(4),PHAGE_Entero_lambda_NC_001416(4),PHAGE_Entero_DE3_NC_042057(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Acinet_Acj61_NC_014661(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_JenK1_NC_029021(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Entero_9g_NC_024146(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Paenib_Shelly_NC_041909(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Acinet_ZZ1_NC_018087(1),PHAGE_Acinet_Acj9_NC_014663(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Paenib_Xenia_NC_028837(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Escher_PA28_NC_041935(1)   11                               37.5%                            46.07%                        
                                  6              49.7Kb                   intact(130)                   integrase,lysis,head,tail,transposase,capsid     2071111-2120879          3                        71                      50                               15                               91.5%                            6                                yes                              25                               PHAGE_Entero_DE3_NC_042057(15),PHAGE_Entero_lambda_NC_001416(15),PHAGE_Entero_HK630_NC_019723(15),PHAGE_Entero_HK629_NC_019711(13),PHAGE_Entero_BP_4795_NC_004813(10),PHAGE_Phage_Gifsy_1_NC_010392(9),PHAGE_Entero_YYZ_2008_NC_011356(9),PHAGE_Entero_HK225_NC_019717(8),PHAGE_Stx2_c_1717_NC_011357(6),PHAGE_Entero_mEp237_NC_019704(6),PHAGE_Cronob_phiES15_NC_018454(5),PHAGE_Entero_mEp460_NC_019716(5),PHAGE_Stx2_c_86_NC_008464(5),PHAGE_Entero_phi80_NC_021190(4),PHAGE_Entero_N15_NC_001901(4),PHAGE_Entero_cdtI_NC_009514(4),PHAGE_Entero_933W_NC_000924(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Entero_VT2_Sakai_NC_000902(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(3),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Salmon_HK620_NC_002730(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Klebsi_phiKO2_NC_005857(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Hypert_2_NC_014321(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_JenK1_NC_029021(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Sulfol_SMV1_NC_023585(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Helico_phiHP33_NC_016568(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Clostr_phiCD27_NC_011398(1),PHAGE_Clostr_phiCT9441A_NC_029022(1),PHAGE_Entero_mEpX2_NC_019705(1)   15                               21.12%                           50.99%                        
                                  7              57.9Kb                   questionable(80)              integrase,lysis,lysin,terminase,tail         2158298-2216273          0                        77                      70                               4                                96.1%                            3                                yes                              25                               PHAGE_Shigel_POCJ13_NC_025434(32),PHAGE_Stx2_vB_EcoP_24B_NC_027984(27),PHAGE_Shigel_Stx_NC_029120(24),PHAGE_Entero_933W_NC_000924(21),PHAGE_Entero_VT2_Sakai_NC_000902(20),PHAGE_Escher_PA28_NC_041935(19),PHAGE_Stx2_II_NC_004914(17),PHAGE_Entero_Min27_NC_010237(13),PHAGE_Shigel_Ss_VASD_NC_028685(11),PHAGE_Escher_P13374_NC_018846(11),PHAGE_Stx2_c_86_NC_008464(8),PHAGE_Entero_VT2phi_272_NC_028656(7),PHAGE_Escher_TL_2011c_NC_019442(7),PHAGE_Escher_phage_NC_004913(6),PHAGE_Escher_PA2_NC_028449(5),PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_HK225_NC_019717(4),PHAGE_Escher_phi191_NC_028660(4),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Entero_HK629_NC_019711(3),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Entero_mEp234_NC_019715(3),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Escher_HK75_NC_016160(3),PHAGE_Plankt_PaV_LD_NC_016564(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Acinet_YMC11/11/R3177_NC_041866(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Gordon_Bantam_NC_031074(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Coryne_phi674_NC_042355(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Coryne_phi673_NC_042354(1),PHAGE_Pseudo_PS_1_NC_029066(1)   32                               41.55%                           50.18%                        
                                  8              45.7Kb                   questionable(90)              integrase,lysin,tail                         2271455-2317182          4                        60                      50                               7                                95%                              3                                yes                              25                               PHAGE_Entero_DE3_NC_042057(14),PHAGE_Entero_lambda_NC_001416(12),PHAGE_Entero_HK629_NC_019711(12),PHAGE_Entero_YYZ_2008_NC_011356(12),PHAGE_Entero_HK630_NC_019723(12),PHAGE_Entero_BP_4795_NC_004813(10),PHAGE_Stx2_c_1717_NC_011357(8),PHAGE_Salmon_SPN3UB_NC_019545(7),PHAGE_Phage_Gifsy_2_NC_010393(7),PHAGE_Phage_Gifsy_1_NC_010392(6),PHAGE_Entero_mEp237_NC_019704(6),PHAGE_Shigel_POCJ13_NC_025434(6),PHAGE_Entero_cdtI_NC_009514(6),PHAGE_Shigel_Stx_NC_029120(6),PHAGE_Entero_HK225_NC_019717(5),PHAGE_Stx2_II_NC_004914(5),PHAGE_Entero_VT2_Sakai_NC_000902(5),PHAGE_Entero_933W_NC_000924(4),PHAGE_Stx2_c_86_NC_008464(4),PHAGE_Escher_TL_2011c_NC_019442(4),PHAGE_Escher_phage_NC_004913(4),PHAGE_Escher_PA2_NC_028449(3),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Salmon_SEN34_NC_028699(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Escher_PA28_NC_041935(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_mEp213_NC_019720(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Bacill_TsarBomba_NC_028890(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_CAjan_NC_028776(1),PHAGE_Escher_Seurat_NC_027378(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Bacill_BCP78_NC_018860(1),PHAGE_Escher_slur01_NC_028831(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1)   14                               23.33%                           51.27%                        
                                  9              17.3Kb                   questionable(70)              plate,tail,envelope,lysin                    2510347-2527726          0                        30                      21                               3                                80%                              6                                no                               15                               PHAGE_Salmon_118970_sal3_NC_031940(6),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Entero_lambda_NC_001416(5),PHAGE_Entero_HK629_NC_019711(4),PHAGE_Entero_HK630_NC_019723(4),PHAGE_Entero_DE3_NC_042057(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Escher_D108_NC_013594(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Vibrio_VBP47_NC_020848(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_vB_EcoM_VR7_NC_014792(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_pYD6_A_NC_020849(1),PHAGE_Escher_ECML_117_NC_025441(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Shigel_SHSML_52_1_NC_031090(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Vibrio_VBP32_NC_020868(1),PHAGE_Escher_pro483_NC_028943(1)   6                                20%                              45.00%                        
                                  10             30.3Kb                   questionable(70)              transposase,plate,integrase                  2521495-2551794          0                        13                      10                               1                                84.6%                            2                                yes                              9                                PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Lister_A118_NC_003216(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Staphy_StauST398_4_NC_023499(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Lister_A006_NC_009815(1),PHAGE_Entero_phiFL1A_NC_013646(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Shigel_Stx_NC_029120(1),PHAGE_Shigel_POCJ13_NC_025434(1)   2                                15.38%                           47.24%                        
                                  11             10Kb                     incomplete(20)                transposase                                  2671410-2681434          0                        12                      6                                2                                66.6%                            4                                no                               6                                PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Escher_vB_EcoM_JS09_NC_024124(1),PHAGE_Microc_MaMV_DC_NC_029002(1),PHAGE_Escher_ST0_NC_041990(1),PHAGE_Bacill_BMBtpLA_NC_028748(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Clostr_phiCDHM19_NC_028996(1),PHAGE_Bacill_SPO1_NC_011421(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Escher_vB_EcoM_PhAPEC2_NC_024794(1),PHAGE_Escher_6_NC_041864(1),PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082(1),PHAGE_Bacill_CampHawk_NC_022761(1),PHAGE_Escher_APCEc01_NC_029091(1),PHAGE_Clostr_phiCD506_NC_028838(1),PHAGE_Clostr_phiCD481_1_NC_028951(1)   1                                16.66%                           50.96%                        
                                  12             15.2Kb                   questionable(70)              transposase,lysin                            2981471-2996720          0                        25                      13                               7                                80%                              5                                no                               8                                PHAGE_Entero_BP_4795_NC_004813(6),PHAGE_Entero_YYZ_2008_NC_011356(3),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Pectob_CBB_NC_041878(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Entero_VT2_Sakai_NC_000902(2),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Serrat_BF_NC_041917(1),PHAGE_Bacill_BMBtpLA_NC_028748(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Yersin_fHe_Yen9_04_NC_042116(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Bacill_PfEFR_5_NC_031055(1)   6                                24%                              47.60%                        
                                  13             45.9Kb                   intact(103)                   lysis,head,integrase                         3574560-3620503          1                        57                      51                               4                                96.4%                            2                                yes                              11                               PHAGE_Escher_phiV10_NC_007804(38),PHAGE_Entero_Tyrion_NC_031077(36),PHAGE_Escher_TL_2011b_NC_019445(35),PHAGE_Salmon_SPN1S_NC_016761(24),PHAGE_Salmon_epsilon15_NC_004775(23),PHAGE_Salmon_SJ46_NC_031129(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Burkho_BcepC6B_NC_005887(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_IME10_NC_019501(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Staphy_42E_NC_007052(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Thermu_phiYS40_NC_008584(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Acinet_AP22_NC_017984(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Caulob_Cr30_NC_025422(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Thermu_TMA_NC_015937(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Acinet_LZ35_NC_031117(1)   36                               66.66%                           49.38%                        
                                  14             17.3Kb                   intact(130)                   integrase,transposase                        4225412-4242806          0                        23                      13                               4                                73.9%                            6                                no                               8                                PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Escher_PA28_NC_041935(2),PHAGE_Mycoba_32HC_NC_023602(1),PHAGE_Bacill_BtCS33_NC_018085(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Strept_SM1_NC_004996(1),PHAGE_Thermu_P2345_NC_009803(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Mycoba_Redi_NC_023730(1),PHAGE_Thermu_P7426_NC_009804(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Clostr_phi3626_NC_003524(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Salmon_SJ46_NC_031129(1)   5                                13.04%                           47.02%                        
