gi|00000000|ref|CP025931.1|  Porphyromonas gingivalis strain TDC 60 chromosome, complete 2334880, gc%: 48.35%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
626815..626829                     attL                                                                                 N/A                 ATTTTGTAACAATCT
complement(628108..629406)         PHAGE_Cellul_phi46:3_NC_021792: site specific recombinase, tyrosine; CF002_1948; phage(gi526177232)     1.59e-21            PorphyromonasgingivalisMNIKRNIIFALESRKKDGVPIVENVPIRMRVNFASQRIEFTTGYRIDVAKWDGDKQRVKNGCTNKLKQSASEINAALLGYYTELQEIFKRFEVAEIMPSPAEVKEAFNNRHGQNEKMELSNSDISNEPSNFYEAFDDFVRVCGRQNDWTHSTFEKFAAVKNHLKNFRSELSFDFFDEEGLTEYVQYLREVREMRNSTIGKQLSFLKWFLRWSFKQGMHSNNAYDTFKPKLKDTQKKIIFLTWEELNRLREFKIPPTKQALERVRDVFLFQCFTGLRYSDVFNLRRSDIKGDHIEVTTVKTSDSLIIELNDHSKAILEKYKDVEFENDKALPVITNQKMNDYLKELAELAEINEPVRQTYYKGNERIDEVTPKYALLGTHAGRRTFICNALALGIPPQVVMKWTGHSDYKAMKPYIDIADDIKANAMSKFNQL
629887..631179                     PHAGE_Flavob_23T_NC_041859: protector from prophage-induced early lysis; CF002_1949; phage(gi100001)     1.08e-12            PorphyromonasgingivalisMKSQFRSVFYLRSNYINKEGKTPVLIRIYLNKERLSLGSTGLAVNPIQWDSEKEKVKGHSVEALEVNRKIEEIRADILTIYKRLDVTVEDLTLERIKSEYFGTSDTLTSVMELFEKHNSDVRVQVGITKTVATLQKYENCKRRFEQFLKSKYRRTDLKFSELTPLIIHNFELFLLTVAKCRPNTSTKILKFLKTITLYGQKHGFLAHDPFANKRFYLENTDRGFLTDEEIKNLIHKEMASPRLDLVRDIFLFSCFTGLAYIDVANLTEDNIVELDGRKWIMTKRQKTNIATNILLLEIPGMILEKYRPVRKERKLLPVISNQKMNGYLKEIADLCGIKKHLTFHMARHTFSTTICLSNGISMETLSKMLGHSNIGTTQIYGKITDHKIQEDMTALTDREHSALEGYCESIARQKAGQSPYESQTLNPKAL
631176..631631                     hypothetical protein; CF002_1950                                                     N/A                 PorphyromonasgingivalisMKQNNPKELSYFRLKLESYMRDHHPERLGETEFITARADMALTAYCDAVAQGFTHPEAESMASEVLYQGLHFSKYDTLVSVLENEFDKEQPAPLPQRLAPILLSNKAVQATFAKFGLTDEFALDKQYDRLYTELTGTMVLLIESNGLPIVK
632342..632611                     DNA-binding helix-turn-helix regulator; CF002_1953                                   N/A                 PorphyromonasgingivalisMKLIIIDRKAWEHLRSSFADFIHRTEQLIGNPPEAEQWMDNEAVCRRLGISKRTLQTYRDTGKIPFSMIGHKCYYRENDITEILNAKNE
632632..632937                     DNA-binding helix-turn-helix regulator; CF002_1954                                   N/A                 PorphyromonasgingivalisMTENEIMTQQDPQMQMFAQLMEGILKKLERYCASSRPMLGGEVYLTGEEVCKQLRLSTRTLQDYRDNGTIAYCKIGDKILYKQSDIQAMLERHYYPIPKKP
632934..633410                     hypothetical protein; CF002_1955                                                     N/A                 PorphyromonasgingivalisMTNIDEKRSLRLKQALRDMGNYGVKLRKPEESPFYDQPVDYEAEKKRFEPVQVEEQEDMESNEEFAPTERAASAEEPPQRVGKIKDRKRLAEFQRKYLQPLRVSHRKAVYVSEETQSRLNYVVRKIGEQGASISGYVEQVLREHLDHYKEDVETWRKL
complement(634017..634820)         PHAGE_Erysip_SE_1_NC_029078: integrase; CF002_1958; phage(gi985758872)               2.25e-21            PorphyromonasgingivalisMVESFKTALREGNMAENTISAYIYAVNDYFSKHKTLNKRNLLLYKANIIEQFKPKTVNLRIQALNKFLEHVGKPKLRLKSVKVQQRSYLENVISQADYIFFKKKLKQEENLMWYFVVRFLTATGARVSELIQIKVEHVRIGYFDIYSKGGKVRRLFIPRRLRDEAEKWFEATQQTTGYIFRNRFGERITTRGIAQQLKNYAERYGLNTNVVYPHSFRHRYAKNFLEVFNDIALLADLMGHESIETTRIYLRRTASEQQAIVDKVITW
634915..636183                     restriction endonuclease subunit S; CF002_1959                                       N/A                 PorphyromonasgingivalisMVCIDDEIPFEIPNGWEWCRMGAIGDWGAGATPAKGNPNYYGGNILWLRTGELNNDVVYDTGIKVTNKALKECSLRLNKIGDVMIAMYGATIGKVAIAGTKMTTNQACCACTPIGIFNWYLFYFLMGSQIDFVKKGEGGAQPNISREKLIAHIMPVPPLTEQHKIVGKIKETLPLVEKYTHSQTQQDKLNDSIKTLLRKSILQEAIQGHLVPQDADDELASVLLQRIKEEKQRLIKEGKLKKKDAIDSVIFKGDDNTYYEQKDGTAIQIESDYDFPNTWEVVRLSHICRLINGEKKEGQYVCLDARYLRGKSNGDHLNSGKFVNKGDNIILVDGDNSGEVFAVPHDGYMGSTFKQLWVSEAMHLPYVLYFIQFYKDLLRNSKKGVAIPHLNKEVFYSLLIGIPPYQEQIRIANAMGELYARL
complement(636178..637740)         type I restriction endonuclease; CF002_1960                                          N/A                 PorphyromonasgingivalisMTGKQLKNSILQWAIQGKLVPQDPNDEPASVLLEKIRAEKARLTKEGKIKKDKKESIIYRGEDNSYYEKFADGKVVCIDDEIPFEIPNGWEWCRICHLFLHASGKQQSSGNKGNGTPQRFITTSNLYWGRFVLDNVKVMNFTDEEIITCSATKGDLLVCEGGAGYGRSAIWDKDYDICLQNHVHRLRPYIDGICEYIYYFIYLLKESNQLTSVGTAMPGLSANRLKGLLLPLPPHKEQKCIIDKLTRAIPFIERYDDKEKTLSLLNVDLPIRLMKSILQEAIQGRLVLQDSNDEPASILLQHIKEEKQRLVKEGKLKKKDVIDSTIFRGDDNTYYEQIGSEIMDVSNEIPFDLPCSWQWVRFGQIVRMSIGKTPVRGDVRYWSNATKPWVSISDMVDYGHINNTKEKISNAAASLMGSISPVGSLLMSFKLTVGRTSILNIDAYHNEAIITIYPFIDDEFALRDYLFYTLPILSNMGDFKDAIKGKTLNSKSLNSLLIPLPPLKEQRRIINRLEELYAYL
complement(637737..638216)         PHAGE_Clostr_phiCD211_NC_029048: Death-on-curing family protein; CF002_1961; phage(gi981220993)     1.06e-06            PorphyromonasgingivalisMNKEIHYISYGEALEVYRKMIDASDGGFAGVRDEGGILATLDFVQNDMYYPTFTEKLAYLVFKFCSGHYFNDGNKRIALTLGAYFLHKNDYPWEACTFMRQFEAIVYHIAASHIDQDLLLRITNAFMDRKDYSESLKIDIANAMSKGQLGVTEEKDQEQ
complement(638209..639225)         PHAGE_Clostr_c_st_NC_007581: hypothetical protein; CF002_1962; phage(gi80159838)     1.17e-15            PorphyromonasgingivalisMKDLTVSNIERQNVLNNRFAINKIQEQLDITGMLFEGEYWLTKKMVAEFYGVDVSTIDRYLASNGDELKHNGYVLCKGKLLKEFKLQFAHLINEVSKTTQLGLFNFRAFLNMGMLLTESERAKTLRSMILDLVIATIHEKTGGGTKFINRRDINYIPAAITEENYRKNLTSVISQYVQGHQTYKYAQVTDLIYKAVFKENAKEYREILRLDNKDNVRHTLYAEVLLVISSFENGVGSAIQEQCKQNGKVKLSIEEVERIVGELAEHPMQKPYLNDARTKMASRDFSFRDAYHGNIAEYLKAVTPEEFERFIGDQSVDFDHILESNKDVLKRLKQAEDE
complement(639237..640745)         PHAGE_Acinet_Bphi_B1251_NC_019541: putative restriction-modification protein; CF002_1963; phage(gi423261981)     6.00e-23            PorphyromonasgingivalisMALNNFVKSIRNIMRNDAGINGDAQRIEQIAWMLFLKIYDEKENDWEFNEDKYQSFIPEPCRWRSWAKDQGDGNALTADALLEFVNNTLFPTLKALEVTPDTPIRSTIVRTTFEGANQYMKDGVLLRQVINVIDALDLGDYNESHAFGEIYETILKEMQSAGSAGEFYTPRALTDFMAETIDPQIGEKMADFACGTGGFIASWLKALDKKVQTAQDKEAYAKSIYGIEKKQFPYMLCVTNMLLHDIEAPRILHDNSLSKDVLNYTDEDKFNVILMNPPYGGNEKNDIKQHFPSDLSSSETADLFMVLIMYRLAEDGRAAVILPDGFLFGTDNAKLAIKERLLREFNLHTIIRLPGSIFSPYTSIATNILFFNNEKAEGSEEGFCTKETWFYRLDMPEEYKHFSKTKPMRSEHCLPIIDWWKNRQEIVDAGNNDEKSRCFTAKQLLDTDCNLDQCKFPKEEEEILPPAELLADYYKKRAALDHEIDKTLSEIQKILGIEIKSL
complement(640749..643136)         PHAGE_Bacill_BCJA1c_NC_006557: DEAD box family helicase; CF002_1964; phage(gi56694884)     7.92e-23            PorphyromonasgingivalisMDNMHKMSEEDIKLKFITPQILSKGWSFDDISMEKKVKLTDGKINLQGNFVVRSKAKFADYMLYYNKATPIAIVEAKDAKHTISHGLQQAKEYAKMMDIPFAYSSNGQGFQEYDFLTGKELSLTMEEFPTKEELYSRFIRDSHSGEGLSDDELKVIKQPFCIGQDIFPPRYYQRNAVNQTVRAVAQGKKRMLLVMATGTGKTYTAFQIVYRLLKAGLVKKVLYLADRNVLIDQSIEQDFKPLAKTIHKVNFQQDLNSGITAYEVYFALYQQLIGQGGRKQYEELFKSEFFDLVIVDECHRGSAKDDSNWREILDYFSSSIQLGMTATPKETSYQSSISYFGEPLYTYSLKEGIEDGFLAPFKVVNITTNIGDEWRPTKGQTDVYGNEIEDRIYNNTDYDYNIVIEDRIREVAQQITTYLKHTDRMSKTIVFCADEEHAERMRTALSNANADMCKKNPDYVVRITGSDAYGQSKLDYFISVSSKYPVIATTSKLLSTGVDCKMVKLIVLDQRINSMTEFKQIVGRGTRIREKEGKTHFSLMDFRNITRLFADPDWDGPVEVDLNYPPQPIPVPPPQPCLICGKTPCECPCPICGKNPCVCINPPKPPKPVIDKDGCEVRVLQQVVSIYDTKGKLLRTESITDYTKKNINETYSDLEDFILHWNKAEKKARITDLLRDRGINLEALKQEQGLGDVDDFDFICHIAFGKKPLTRKERAEQVKKRDVFNKYGEEARKVLEALLDKYAVDGISQLENPMVLKLDPFRQMGAPAHIAKLFGGREKYYSAVRELENFIYSIA
complement(643206..643409)         PHAGE_Riemer_RAP44_NC_019490: lambda repressor-like DNA-binding domain protein; CF002_1965; phage(gi418489929)     6.18e-06            PorphyromonasgingivalisMKAINRIKAVLAEKQVSGKWLANEIGRTENTVSRWCSNKVQPSLENLLEIAEVLKVDIRELLRSTQE
complement(643669..647082)         PHAGE_Vibrio_VvAW1_NC_020488: DNA methylase; CF002_1966; phage(gi460042889)          5.34e-95            PorphyromonasgingivalisMPKSLAGQLPKLYATEKSLVGDKIACARYFHPMSAYTAYLLEYDPKERVGFGLVTMGYGWELGYMSLDEMKEVKVMGLGIERDLHFTPKALHLVEELKEYIGERYTHTEEQVIVHRTDKAEAKALSGTYPAEEETDISPEDIRITKHRLTFDRDGIHAQTLDPVSGEAIGDRQPILPAPASEPAEKTSEAVEEQAPDGVPVMTLFRQYDTPNRPVRREIRTDVESPREMNGRAVYFDEEHHPVESVDLDVPSLFPTGAIETWNREVERFNEVERKPTSVKPRTQRPSSRKQQPTSGQPDLFSGLWDTPALTEQFRQPPAPPSFDTSPRPYLSVIGEHLRDGSIVRQGKQIGYLSQVSEGNPLFHPVDLPSAQIGRLALYIDLRDTYHRLYDYETTREIEDKETRSRLNTLYDRFVGAYGHLNARKNAELLRMDTGSSDIFFLERSRDGQYIKADIFDHPTAFSQTALRTAETPLEALSASLNKYGEVRLAYMASLLPEQEEDEIVAALEGRIYYHPIERGYQIADRFISGNVIEKAEEIEQWVLQHGENEAVKKSLSALKAAIPTPIPFADLDFNFGERWIPAGIYARFASELFETEVHIGYSAPADEYTVKAPTKNPKISHTYAVKGEFKTYDGINLMKHALHNTIPDISKSKTVLDKETGKEKQIKVRDGDAIQQTNTKIEEMREQFSAWLVRQPDTFKEKLADRYNRLFNCFVRPQYDGSHQTFPGLDVKALGFEDLYKSQKDAVWMLKINGGGICDHEVGAGKTMIMCTAAYEMKRLGLANKPMIIGLKANVYDIAATFSKAYPNARILYPGKNDFTVRNRARIFSDIRNNDWDCIILTHEQFGAIPQSLEIQEGIFQKELDSVEENLEVLRQQGREISGRMLKGLEIRKKNLEAKLTRIADDIAERKDDTIDFKRMGIDHLFVDESHKFKNLTFTTRHDRIAGLGNSEGSQRALNLLFAIRTIQERTGKDLGATFLSGTTISNSLTELYLLFKYLRPQALEKQGIGTFDAWAAVFARKSTDYEFSVTNEIIQKERFRTFIKVPELGAFYAEICDFRTAKDIGIDRPEKHEILHHIPPTPEQEAFIQKLMEFARTGNAELLGREKLSEREEKAKMLIATDYARKRFKISASFR
653297..653311                     attR                                                                                 N/A                 ATTTTGTAACAATCT
