gi|00000000|ref|CP027060.1|  Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome. 4653240, gc%: 50.80%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
97198..98130                       PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; C5Y66_00495; phage(gi966197797)     0.0                 EscherichiacolistrK12substrMG1655MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA
98206..98280                       tRNA                                                                                 N/A                 GTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCA
98251..98266                       attL                                                                                 N/A                 TTGCAGGTTCGATTCC
98442..99599                       PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; C5Y66_00505; phage(gi16130281)     0.0                 EscherichiacolistrK12substrMG1655MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
99752..100114                      PHAGE_Shigel_SfIV_NC_022749: putative flippase; C5Y66_00510; phage(gi557307553)      8.47e-74            EscherichiacolistrK12substrMG1655MLKLFAKYTSIGVLNTLIHWVVFGVCIYVAHTNQALANFAGFVVAVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWAADRCALPPMITLVTFSAISLVCGFVYSKFIVFRDAK
100111..101031                     PHAGE_Shigel_SfIV_NC_022749: bactoprenol glucosyltransferase; C5Y66_00515; phage(gi557307552)     0.0                 EscherichiacolistrK12substrMG1655MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYIIKRVKK
101028..102359                     PHAGE_Shigel_SfIV_NC_022749: serotype specific glucosyltransferase; C5Y66_00520; phage(gi557307551)     2.45e-92            EscherichiacolistrK12substrMG1655MNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIPAFTYDLPLLYKLKGHIDSIDSYEYISSYSYILYTYVLFISIFTEYLDARVLSLFLKVIYIYSLYAIFTSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQEQIVIIFLPFLVYSLTCKNNKSMLLLFFSLLIISTAKNQFILTPLIVYSYYIFFDRHKLIIKSVICVVCLLASIFAISYSKGVVELNKYHATYFGSYLYMKNNGYKMPSYVDDKCVGLDAWGNKFDISFGATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKLPFDDGVMSQYKENYFHVYKKLHVIYGESNILTTITNIKDNIFKNIRFISLLLFFIASIFIRNNKIKASLFVVSLFGISQFYVSFFGEGYRDLSKHLFGMYFSFDLCLYITVVFLIYKIIQRNQDNSDVKH
102658..103002                     PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; C5Y66_00525; phage(gi557307548)     3.99e-57            EscherichiacolistrK12substrMG1655MILDRHITSRGYVCMRPATIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELPEE
complement(102974..103414)         PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; C5Y66_00530; phage(gi557307547)     9.55e-20            EscherichiacolistrK12substrMG1655MNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR
complement(103441..103959)         PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00535; phage(gi557307546)     1.54e-42            EscherichiacolistrK12substrMG1655MLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC
complement(104009..104284)         PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; C5Y66_00540; phage(gi19549028)     3.82e-61            EscherichiacolistrK12substrMG1655MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYPW
complement(104284..104778)         PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00545; phage(gi557307568)     1.88e-111           EscherichiacolistrK12substrMG1655MSMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA
complement(104775..105482)         PHAGE_Shigel_SfIV_NC_022749: replication protein; C5Y66_00550; phage(gi557307567)     1.19e-171           EscherichiacolistrK12substrMG1655NRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFDASKSGKKSGFHPSESGGDPSVKSKHDPSDKKPSRPDASQPDTQTDEQDFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
105501..105863                     PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00555; phage(gi557307560)     2.85e-80            EscherichiacolistrK12substrMG1655MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
105929..106753                     PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00560; phage(gi557307559)     0.0                 EscherichiacolistrK12substrMG1655MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA
106881..107417                     PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00565; phage(gi557307558)     4.07e-129           EscherichiacolistrK12substrMG1655MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
107408..107770                     PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00570; phage(gi557307557)     3.75e-82            EscherichiacolistrK12substrMG1655MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
107770..108075                     PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_00575; phage(gi557307556)     3.98e-67            EscherichiacolistrK12substrMG1655MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK
108172..108187                     attR                                                                                 N/A                 TTGCAGGTTCGATTCC
108207..108407                     PHAGE_Entero_HK633_NC_019719: hypothetical protein; C5Y66_00580; phage(gi428782548)     5.50e-44            EscherichiacolistrK12substrMG1655MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG
complement(108591..109526)         PHAGE_Burkho_phi1026b_NC_005284: gp58; C5Y66_00585; phage(gi38707948)                4.74e-16            EscherichiacolistrK12substrMG1655MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS

#### region 2 ####
2838193..2838239                   attL                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT
complement(2838253..2839416)       PHAGE_Shigel_Stx_NC_029120: integrase; C5Y66_14485; phage(gi985761248)               0.0                 EscherichiacolistrK12substrMG1655MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
complement(2839536..2839799)       PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; C5Y66_14490; phage(gi209427739)     1.38e-57            EscherichiacolistrK12substrMG1655MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
2839814..2840125                   PHAGE_Escher_PA28_NC_041935: hypothetical protein; C5Y66_14495; phage(gi100032)      1.29e-67            EscherichiacolistrK12substrMG1655YEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
2840122..2840217                   PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; C5Y66_14500; phage(gi100033)     6.78e-14            EscherichiacolistrK12substrMG1655MTGKEAIIHYLGTHKSFCAQDVAAVTGATVI
2840280..2841442                   PROPHAGE_Escher_MG1655: IS3 transposase B; C5Y66_14505; phage(gi16128284)            0.0                 EscherichiacolistrK12substrMG1655MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILPKGRDILREAPEMKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
2841473..2841685                   PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; C5Y66_14510; phage(gi100033)     3.45e-36            EscherichiacolistrK12substrMG1655TSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
2841753..2842085                   PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; C5Y66_14515; phage(gi311992758)     4.38e-10            EscherichiacolistrK12substrMG1655MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
2842340..2843866                   PHAGE_Burkho_Bcep176_NC_007497: gp53; C5Y66_14520; phage(gi77864678)                 7.01e-37            EscherichiacolistrK12substrMG1655MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF
2844331..2844882                   YbhB/YbcL family Raf kinase inhibitor-like protein; C5Y66_14525                      N/A                 EscherichiacolistrK12substrMG1655MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
2844892..2845689                   AraC family transcriptional regulator; C5Y66_14530                                   N/A                 EscherichiacolistrK12substrMG1655MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE
2845806..2845907                   hypothetical protein; C5Y66_14535                                                    N/A                 EscherichiacolistrK12substrMG1655MRTYNPNSLLPSQMQKCTCNSLHLAFDLCGGEA
2845904..2846359                   PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; C5Y66_14540; phage(gi401817579)     2.41e-79            EscherichiacolistrK12substrMG1655MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
2846359..2846529                   PHAGE_Escher_HK639_NC_016158: NinE; C5Y66_14545; phage(gi356870663)                  4.54e-20            EscherichiacolistrK12substrMG1655MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG
2846522..2846812                   PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; C5Y66_14550; phage(gi100033)     2.58e-42            EscherichiacolistrK12substrMG1655MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA
2846809..2847171                   PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; C5Y66_14555; phage(gi100034)     5.08e-38            EscherichiacolistrK12substrMG1655MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE
2847168..2847308                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; C5Y66_14560; phage(gi435439319)     2.69e-14            EscherichiacolistrK12substrMG1655MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV
2847394..2847777                   PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; C5Y66_14565; phage(gi985761278)     3.75e-71            EscherichiacolistrK12substrMG1655MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
2847919..2848137                   hypothetical protein; C5Y66_14570                                                    N/A                 EscherichiacolistrK12substrMG1655MLGRQRLPQHIFFVIRLELVNQTYSNDVISAYTECFREGANKRGNSSRLTQSFHFFMFEPIFSPVNALNQPI
complement(2848175..2849191)       PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; C5Y66_14575; phage(gi971482498)     0.0                 EscherichiacolistrK12substrMG1655MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
2849154..2849228                   oxidoreductase; C5Y66_14580                                                          N/A                 EscherichiacolistrK12substrMG1655MMNPVLWLQMTNMISYQGLVRTFLS
complement(2849196..2850263)       phosphoporin PhoE; C5Y66_14585                                                       N/A                 EscherichiacolistrK12substrMG1655MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKEGANKSLI
2850836..2851051                   PHAGE_Entero_VT2phi_272_NC_028656: holin; C5Y66_14590; phage(gi966197762)            5.28e-37            EscherichiacolistrK12substrMG1655MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
2851051..2851548                   PHAGE_Entero_SfI_NC_027339: lysozyme; C5Y66_14595; phage(gi849250312)                1.10e-117           EscherichiacolistrK12substrMG1655MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ
2851545..2852006                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; C5Y66_14600; phage(gi100031)       5.49e-105           EscherichiacolistrK12substrMG1655MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR
complement(2852038..2852331)       PHAGE_Escher_PA28_NC_041935: endonuclease II; C5Y66_14605; phage(gi100065)           6.91e-64            EscherichiacolistrK12substrMG1655MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK
complement(2852622..2853032)       PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; C5Y66_14610; phage(gi100033)     9.72e-96            EscherichiacolistrK12substrMG1655MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
complement(2852978..2853179)       PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; C5Y66_14615; phage(gi100033)     3.69e-34            EscherichiacolistrK12substrMG1655LLRNQYYLKTFLIFDINHQQNTKRSDQIEAIKTIMQTTRPRITWKVLPMAQVAIFKEIFDQVRKDLA
2853318..2853524                   PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; C5Y66_14620; phage(gi100034)     6.10e-43            EscherichiacolistrK12substrMG1655MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD
complement(2853689..2853883)       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; C5Y66_14625; phage(gi157166037)     1.68e-25            EscherichiacolistrK12substrMG1655MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
2854031..2854132                   hypothetical protein; C5Y66_14630                                                    N/A                 EscherichiacolistrK12substrMG1655MIIIIILWVLSGDPTGYGAATSRVFAIYENFPV
2854272..2854817                   PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; C5Y66_14635; phage(gi100035)     4.64e-128           EscherichiacolistrK12substrMG1655MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG
2854792..2855535                   PHAGE_Entero_DE3_NC_042057: DNA polymerase; C5Y66_14640; phage(gi100036)             3.93e-65            EscherichiacolistrK12substrMG1655MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
2855508..2855645                   nucleocapsid protein; C5Y66_14645                                                    N/A                 EscherichiacolistrK12substrMG1655MAYEPCQGVIIGIMPQHVLSKNMLRLDAIFFLKRKTLLQYLEPWF
complement(2855590..2856216)       class I SAM-dependent methyltransferase; C5Y66_14650                                 N/A                 EscherichiacolistrK12substrMG1655MYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
2856313..2856573                   PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; C5Y66_14655; phage(gi428782810)     9.09e-20            EscherichiacolistrK12substrMG1655MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAKKYRVLLNRVDTSVAPDIEWLIQP
2859495..2859541                   attR                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT

#### region 3 ####
3472259..3472272                   attL                                                                                 N/A                 ATTCATCTTATTTT
3472314..3473207                   phage exclusion protein Lit; C5Y66_17770                                             N/A                 EscherichiacolistrK12substrMG1655MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
complement(3473298..3474425)       PHAGE_Entero_HK022_NC_002166: integrase; C5Y66_17775; phage(gi9634144)               7.90e-69            EscherichiacolistrK12substrMG1655MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
complement(3474406..3474651)       excisionase-like protein from lambdoid prophage 14; C5Y66_17780                      N/A                 EscherichiacolistrK12substrMG1655MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
3474764..3474971                   PHAGE_Entero_mEp460_NC_019716: hypothetical protein; C5Y66_17785; phage(gi428782352)     3.70e-05            EscherichiacolistrK12substrMG1655MGRVINPSSGDTLLCFVKRAVPERTKEKTGTAKTTHSIKLWCRVPPVPGEGCTPGGWVSTEGRLSASTLA
3474916..3475116                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_17790; phage(gi557307561)     7.80e-25            EscherichiacolistrK12substrMG1655MHTRRVGIHRRSIVSLNLNPRALSRIHHNAKDSLWLKILSCYVPVFSPLQARWYAGVLTQPASKET
3475116..3475457                   hypothetical protein; C5Y66_17795                                                    N/A                 EscherichiacolistrK12substrMG1655MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS
complement(3475395..3475703)       PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; C5Y66_17800; phage(gi401817573)     9.10e-15            EscherichiacolistrK12substrMG1655MNEQNLKHVIALLLEDAKRLQQIEPNAGTEARILLAKQALKTCGAQAPGRTEFMNFMANTLTPLPCNGEKVSRVYHDTMVKALRIELDGLRRKIVMNEIVTN
complement(3475878..3476552)       PHAGE_Shigel_SfIV_NC_022749: repressor / cI; C5Y66_17805; phage(gi557307563)         2.29e-168           EscherichiacolistrK12substrMG1655MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGATKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPRRYKIKA
3476643..3476843                   PHAGE_Shigel_SfIV_NC_022749: Cro; C5Y66_17810; phage(gi557307564)                    3.92e-41            EscherichiacolistrK12substrMG1655MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD
3476887..3477444                   PHAGE_Shigel_SfIV_NC_022749: DNA binding transcriptional regulator; C5Y66_17815; phage(gi557307565)     6.84e-127           EscherichiacolistrK12substrMG1655MGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA
3477620..3477799                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; C5Y66_17820; phage(gi100119)     9.89e-14            EscherichiacolistrK12substrMG1655MRQVNRWFKDHYGVPVRVIRWEPETQRVIYLREGYEHECFSPLEQFRRKFREIEVGHEH
3477789..3479156                   PHAGE_Shigel_SfIV_NC_022749: large terminase subunit; C5Y66_17825; phage(gi557307528)     0.0                 EscherichiacolistrK12substrMG1655MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWASARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTDGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
3479168..3479350                   PHAGE_Shigel_SfII_NC_021857: putative integral membrane protein; C5Y66_17830; phage(gi526244693)     1.59e-34            EscherichiacolistrK12substrMG1655MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
3479350..3479823                   PHAGE_Shigel_SfIV_NC_022749: portal protein; C5Y66_17835; phage(gi557307529)         1.24e-94            EscherichiacolistrK12substrMG1655MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVYALGRCQRWPEGDRRECYSAR
3479750..3480541                   PHAGE_Shigel_SfIV_NC_022749: baseplate protein; C5Y66_17840; phage(gi557307544)      0.0                 EscherichiacolistrK12substrMG1655MWYMRWEGVSDGLKVTAGSVIQRDDLVQYTTTDDATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHLMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPVDNISIAKNELAVLGTISWT
3480532..3481116                   PHAGE_Shigel_SfIV_NC_022749: tail protein; C5Y66_17845; phage(gi557307545)           2.34e-138           EscherichiacolistrK12substrMG1655MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
3481120..3481908                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; C5Y66_17850; phage(gi557307546)     7.46e-58            EscherichiacolistrK12substrMG1655MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGIDTGRSILSIQGYATEDHAHGLPSRSTIVTDATINFYFDEIWVNSGTDIIKRGNTNDAGLPAPDYGTFKTYKQSVDGLGAAASETRPRNIAFNYIVRAA
3481908..3482510                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; C5Y66_17855; phage(gi557307548)     7.44e-112           EscherichiacolistrK12substrMG1655MHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGIPACSCLDAPGTHKAGYAICRSADFNSWEYVPDHRGETVYSTKTGESKEIKAPGDYPENTTTIAPLSPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA
complement(3482482..3482895)       PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; C5Y66_17860; phage(gi557307547)     1.07e-12            EscherichiacolistrK12substrMG1655MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
complement(3482897..3483241)       hypothetical protein; C5Y66_17865                                                    N/A                 EscherichiacolistrK12substrMG1655NVGLGEGAKLNAATATLGRTGFIAIPVMIGGIEQSVIIQWGWNAAKASASGGDGNTVVFPVAFNNACVAVVANYDNVSAPINAVATGGYTTTSFLLRCAAQTGSYYYNWIAIGY
3483304..3483858                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; C5Y66_17870; phage(gi169936026)        1.14e-116           EscherichiacolistrK12substrMG1655MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRFPAGDK
3483965..3484798                   PHAGE_Mycoba_Lamina13_NC_024143: HNH endonuclease; C5Y66_17875; phage(gi640884809)     1.73e-05            EscherichiacolistrK12substrMG1655MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK
3485032..3485196                   isocitrate dehydrogenase; C5Y66_17880                                                N/A                 EscherichiacolistrK12substrMG1655MLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGEAIIENM
complement(3485299..3485622)       PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; C5Y66_17885; phage(gi209447168)     1.36e-50            EscherichiacolistrK12substrMG1655MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFTPVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKICPYGLK
complement(3486322..3486726)       PHAGE_Entero_lambda_NC_001416: putative envelope protein; C5Y66_17890; phage(gi19263396)     2.17e-34            EscherichiacolistrK12substrMG1655MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
3490290..3490303                   attR                                                                                 N/A                 ATTCATCTTATTTT

#### region 4 ####
3685588..3685599                   attL                                                                                 N/A                 AAATGGGGCAAA
complement(3685619..3686854)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; C5Y66_18995; phage(gi169257268)     4.07e-112           EscherichiacolistrK12substrMG1655MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
complement(3686856..3687071)       PHAGE_Escher_phi191_NC_028660: hypothetical protein; C5Y66_19000; phage(gi966198069)     5.82e-05            EscherichiacolistrK12substrMG1655MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
complement(3687150..3687359)       double-strand break reduction protein; C5Y66_19005                                   N/A                 EscherichiacolistrK12substrMG1655MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN
complement(3687352..3687546)       restriction alleviation and modification enhancement protein; C5Y66_19010            N/A                 EscherichiacolistrK12substrMG1655MRYDNVKPCPFCGCPSVTVKAISGYYRAKCNGCESRTGYGGSEKEALERWNKRTTGNNNGGVHV
complement(3687603..3688412)       PHAGE_Salmon_epsilon15_NC_004775: RecT; C5Y66_19015; phage(gi30387413)               6.80e-107           EscherichiacolistrK12substrMG1655MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE
complement(3688405..3691005)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; C5Y66_19020; phage(gi985761253)     1.44e-171           EscherichiacolistrK12substrMG1655MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQGNTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSKNPVDDDKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYAND
complement(3691107..3691382)       protein RacC; C5Y66_19025                                                            N/A                 EscherichiacolistrK12substrMG1655MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI
complement(3691457..3691627)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; C5Y66_19030; phage(gi169257274)     2.07e-06            EscherichiacolistrK12substrMG1655MTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL
complement(3691627..3691848)       PHAGE_Shigel_Stx_NC_029120: Kil protein; C5Y66_19035; phage(gi985761255)             1.02e-43            EscherichiacolistrK12substrMG1655MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVFLGRDGLPVKAESW
3691977..3692255                   hypothetical protein; C5Y66_19040                                                    N/A                 EscherichiacolistrK12substrMG1655MPRALSRIHRITKFTLKRADISRTSRKKLMPPGLHTAMSLFTTGGALPPFKFNRQDRLFMDIGNAPSCCARFYFTTSGLRWSRLYPYSESLC
3692290..3692778                   PHAGE_Entero_lambda_NC_001416: Superinfection exclusion protein B; C5Y66_19045; phage(gi19263394)     2.21e-08            EscherichiacolistrK12substrMG1655MLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR
complement(3692775..3692930)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; C5Y66_19050; phage(gi472340166)     7.28e-13            EscherichiacolistrK12substrMG1655MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS
complement(3692941..3693120)       hypothetical protein; C5Y66_19055                                                    N/A                 EscherichiacolistrK12substrMG1655MQQLVPPPGVKGRDKMVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM
complement(3693384..3693860)       Rac prophage repressor; C5Y66_19060                                                  N/A                 EscherichiacolistrK12substrMG1655MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASDEIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT
3693984..3694280                   PHAGE_Aggreg_S1249_NC_013597: RNA polymerase sigma factor; C5Y66_19065; phage(gi100049)     7.67e-19            EscherichiacolistrK12substrMG1655MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT
3694303..3694725                   PHAGE_Entero_mEp237_NC_019704: CII protein; C5Y66_19070; phage(gi435439306)          7.32e-10            EscherichiacolistrK12substrMG1655MKIKHEHIESVLFALAAEKGQAWVANAITEEYLRQGGGELPLVPGKDWNNQQNIYHRWLKGETKTQREKIQKLIPAILAILPRELRHRLCIFDTLERRALLAAQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVIVH
3694738..3695595                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; C5Y66_19075; phage(gi169257279)     8.72e-25            EscherichiacolistrK12substrMG1655MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG
3695602..3696348                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; C5Y66_19080; phage(gi169257280)     3.32e-98            EscherichiacolistrK12substrMG1655MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVVQPGIAK
3696320..3696823                   PHAGE_Shigel_Stx_NC_029120: hypothetical protein; C5Y66_19085; phage(gi985761264)     1.99e-44            EscherichiacolistrK12substrMG1655MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS
3697019..3697204                   PHAGE_Entero_lambda_NC_001416: Rz1 protein; C5Y66_19090; phage(gi160338810)          1.89e-31            EscherichiacolistrK12substrMG1655MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPPDWQTPLNGIISPSGNDW
3697401..3698858                   Trk system potassium uptake protein TrkG; C5Y66_19095                                N/A                 EscherichiacolistrK12substrMG1655MNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFIDALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGGAKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGISTVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIELRFFLLIALGVIIVTSFQVWHIGMYDLHGSFIHSFFLASSMLTDNGLATQDYASWPTHTIVFLLLSSFFGGCIGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVTDRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFGVLNDIAKCLMCIAMILGRLEIYPVIILFSGFFWRS
3698797..3699078                   hypothetical protein; C5Y66_19100                                                    N/A                 EscherichiacolistrK12substrMG1655MVALKFILLLYCFQVFFGAPNIWLIYNCEFNIMLTHSLIQYLTLPATPPSPVALAAGVRFIHKARLYEREIKDSLSPITRIVTVCAQRQDAQY
3698996..3699259                   PHAGE_Vibrio_X29_NC_024369: DNA modification methylase; C5Y66_19105; phage(gi658311236)     1.70e-26            EscherichiacolistrK12substrMG1655MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR
3699240..3699599                   PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; C5Y66_19110; phage(gi658307708)     6.33e-07            EscherichiacolistrK12substrMG1655MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP
3699707..3699907                   PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; C5Y66_19115; phage(gi658307715)     7.86e-09            EscherichiacolistrK12substrMG1655MLKELLYAYSVISRARRYAGMAGVPLPLSLTEINEYLATHPVLIERDEFEAVIFALDDQYFQEQCV
3700073..3701005                   PHAGE_Escher_HK639_NC_016158: tail length tape measure protein; C5Y66_19120; phage(gi356870615)     4.25e-25            EscherichiacolistrK12substrMG1655MAEQTSRLAIIIDSTGAKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAIDTVGRRYSELKKFFDKGLIDKEEYEFLVRKLNETTEELSGVAQAQREAEKAGKLAAAQQEAQAQAFQRMLDKIDPLAAALRNLEQQHDELNAAFASGKINGSQFENYSRKIQETRRELTGEAQAEREAAKAHDEQVVALQRLIAQLDPVGTAFNRLVEQQKQLNEAKAKGMLSPEMYEELSGKLRAMRSELEVTQSQLSKTGMSAKQTAFAMRMLPAQMTDIVVGLSTGQSPFMVLMQQGG
3700978..3701232                   PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; C5Y66_19125; phage(gi209427792)     9.75e-45            EscherichiacolistrK12substrMG1655MYGVNAAGRPFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGRCE
3701207..3701326                   ABC transporter; C5Y66_19130                                                         N/A                 EscherichiacolistrK12substrMG1655MTTREGANKQVISSQADSLIKISRIWADFFPANTSNQPI
complement(3701365..3702345)       PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; C5Y66_19135; phage(gi971482498)     0.0                 EscherichiacolistrK12substrMG1655MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQNPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
3702388..3702603                   PHAGE_Entero_BP_4795_NC_004813: outer membrane protein Lom precursor; C5Y66_19140; phage(gi157166058)     1.34e-37            EscherichiacolistrK12substrMG1655MSGTCSHLPKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
3702668..3706030                   PHAGE_Entero_9g_NC_024146: side tail fiber; C5Y66_19145; phage(gi640885143)          0.0                 EscherichiacolistrK12substrMG1655MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNTASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
3706030..3706605                   PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; C5Y66_19150; phage(gi16129505)     2.59e-138           EscherichiacolistrK12substrMG1655MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
complement(3706703..3707293)       PHAGE_Entero_Mu_NC_000929: Gin; C5Y66_19155; phage(gi9633542)                        3.18e-29            EscherichiacolistrK12substrMG1655MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
complement(3707610..3707843)       PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; C5Y66_19160; phage(gi100103)     1.52e-05            EscherichiacolistrK12substrMG1655MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM
3708431..3708442                   attR                                                                                 N/A                 AAATGGGGCAAA

#### region 5 ####
3892474..3892485                   attL                                                                                 N/A                 TAACGGCAGCAA
3901136..3901882                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; C5Y66_20060; phage(gi971760361)     8.52e-10            EscherichiacolistrK12substrMG1655MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ
3901971..3902657                   transcriptional regulator; C5Y66_20065                                               N/A                 EscherichiacolistrK12substrMG1655MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
3902834..3903037                   PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; C5Y66_20070; phage(gi410491512)     4.86e-18            EscherichiacolistrK12substrMG1655MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN
complement(3903072..3904532)       D-mannonate oxidoreductase; C5Y66_20075                                              N/A                 EscherichiacolistrK12substrMG1655MGNNLLSAKATLPVYDLNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADVWTARVVGVVKKALHVQIDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTARVTETYLSLLAHGAKATVAKYSVK
complement(3904621..3905904)       PHAGE_Burkho_phi1026b_NC_005284: gp59; C5Y66_20080; phage(gi38707949)                7.81e-28            EscherichiacolistrK12substrMG1655MDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL
3906691..3906924                   PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; C5Y66_20085; phage(gi100103)     9.57e-06            EscherichiacolistrK12substrMG1655MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
3907241..3907831                   PHAGE_Entero_Mu_NC_000929: Gin; C5Y66_20090; phage(gi9633542)                        2.32e-29            EscherichiacolistrK12substrMG1655MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
complement(3907929..3908504)       PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; C5Y66_20095; phage(gi16129505)     6.90e-139           EscherichiacolistrK12substrMG1655MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
complement(3908504..3909466)       PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; C5Y66_20100; phage(gi16129506)     0.0                 EscherichiacolistrK12substrMG1655MNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
complement(3909417..3909986)       PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; C5Y66_20105; phage(gi100035)     8.15e-125           EscherichiacolistrK12substrMG1655MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRADRQYAGGSRS
complement(3910126..3910227)       hypothetical protein; C5Y66_20110                                                    N/A                 EscherichiacolistrK12substrMG1655MIIIITLRVLSGDPTGYGAATSRVFAIYENFPV
3910375..3910608                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; C5Y66_20115; phage(gi157166037)     6.55e-27            EscherichiacolistrK12substrMG1655MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLCSEKRVSSEANKEKSDITELLRKQVRPD
3910666..3911076                   PHAGE_Entero_lambda_NC_001416: putative envelope protein; C5Y66_20120; phage(gi19263396)     1.04e-75            EscherichiacolistrK12substrMG1655MDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR
complement(3911228..3911401)       protein GnsB; C5Y66_20125                                                            N/A                 EscherichiacolistrK12substrMG1655MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI
complement(3911573..3911728)       hypothetical protein; C5Y66_20130                                                    N/A                 EscherichiacolistrK12substrMG1655MREYPNGEKTHLTVMAAGFPSLTGDHKVIYVAADRHVTSEEILEAAIRLLS
complement(3911875..3912063)       cold-shock protein; C5Y66_20135                                                      N/A                 EscherichiacolistrK12substrMG1655MTNHIHFRCPCCHGSQYRTSSFDVSDMNPFGAKCIFCKSMMITFDNISQYLNASRLSLDLKK
complement(3912074..3912286)       PHAGE_Lactoc_bIL312_NC_002671: Csp; C5Y66_20140; phage(gi13095918)                   8.40e-20            EscherichiacolistrK12substrMG1655MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL
complement(3912649..3913146)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; C5Y66_20145; phage(gi16765210)     1.80e-62            EscherichiacolistrK12substrMG1655MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM
complement(3913143..3913676)       PHAGE_Entero_mEp460_NC_019716: endolysin; C5Y66_20150; phage(gi428782372)            1.35e-121           EscherichiacolistrK12substrMG1655MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
complement(3913673..3913984)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; C5Y66_20155; phage(gi428782371)     5.21e-40            EscherichiacolistrK12substrMG1655MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
complement(3913989..3914204)       PHAGE_Entero_mEp460_NC_019716: porin; C5Y66_20160; phage(gi428782370)                1.63e-42            EscherichiacolistrK12substrMG1655MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE
complement(3914958..3915173)       PHAGE_Lactoc_bIL312_NC_002671: Csp; C5Y66_20165; phage(gi13095918)                   4.11e-20            EscherichiacolistrK12substrMG1655MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIITD
3915474..3915686                   cold-shock protein CspF; C5Y66_20170                                                 N/A                 EscherichiacolistrK12substrMG1655MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS
complement(3916108..3916860)       PHAGE_Entero_mEp460_NC_019716: late gene regulator; C5Y66_20175; phage(gi428782366)     3.20e-177           EscherichiacolistrK12substrMG1655MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
complement(3916874..3917923)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; C5Y66_20180; phage(gi428782365)     1.31e-140           EscherichiacolistrK12substrMG1655MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA
complement(3917925..3918203)       PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; C5Y66_20185; phage(gi401817580)     1.42e-15            EscherichiacolistrK12substrMG1655MARNAKYYNSDNSPVLACTHGRYSHAFKSEWFQHPPCTAEQAEWLIHSYRRRGFEVKKALSLDYRHWIISVRLPYSERPPRASRTFQQRIWR
complement(3918270..3918521)       hypothetical protein; C5Y66_20190                                                    N/A                 EscherichiacolistrK12substrMG1655MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALINFVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE
complement(3918738..3918893)       PHAGE_Entero_933W_NC_000924: host killer protein; C5Y66_20195; phage(gi9632541)      1.17e-25            EscherichiacolistrK12substrMG1655MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
complement(3918965..3919252)       mRNA interferase RelE; C5Y66_20200                                                   N/A                 EscherichiacolistrK12substrMG1655MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL
complement(3919252..3919491)       antitoxin RelB; C5Y66_20205                                                          N/A                 EscherichiacolistrK12substrMG1655MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
3919516..3919821                   hypothetical protein; C5Y66_20210                                                    N/A                 EscherichiacolistrK12substrMG1655MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR
3920024..3920356                   protein FlxA; C5Y66_20215                                                            N/A                 EscherichiacolistrK12substrMG1655MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALVQKQIESLWAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNTAGTIDIYV
complement(3920626..3920748)       plasmid mobilization protein; C5Y66_20220                                            N/A                 EscherichiacolistrK12substrMG1655MLKSRFWCSFSGGLLLVLPGICQKRAESVWAVRVMRRYGK
complement(3920977..3921255)       hypothetical protein; C5Y66_20225                                                    N/A                 EscherichiacolistrK12substrMG1655MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEA
complement(3921239..3921469)       PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; C5Y66_20230; phage(gi422936651)     9.10e-12            EscherichiacolistrK12substrMG1655MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKRAGRLNNENHS
3921553..3921960                   PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; C5Y66_20235; phage(gi401817574)     8.91e-41            EscherichiacolistrK12substrMG1655METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRTNKR
3922127..3922282                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; C5Y66_20240; phage(gi472340166)     5.92e-12            EscherichiacolistrK12substrMG1655MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE
3922242..3922412                   hypothetical protein; C5Y66_20245                                                    N/A                 EscherichiacolistrK12substrMG1655MVPVAGWKETQVSDMDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
3922442..3922660                   hypothetical protein; C5Y66_20250                                                    N/A                 EscherichiacolistrK12substrMG1655MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR
complement(3922683..3922972)       hypothetical protein; C5Y66_20255                                                    N/A                 EscherichiacolistrK12substrMG1655LSLKRMVNLTTRCPQRGRNNPAILTAAPFRGLPQPEAHGRRKFNDRLSMNQLPRHALSRYGLTFQGNILSVNCQFRMRTRVRRTHSTSPVENSLITAA
3923228..3923416                   division inhibition protein DicB; C5Y66_20260                                        N/A                 EscherichiacolistrK12substrMG1655MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ
3923413..3923604                   DUF1482 domain-containing protein; C5Y66_20265                                       N/A                 EscherichiacolistrK12substrMG1655MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
3923697..3924464                   PHAGE_Pectob_ZF40_NC_019522: putative exonuclease; C5Y66_20270; phage(gi422936647)     2.33e-05            EscherichiacolistrK12substrMG1655MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELAY
3924461..3925156                   PROPHAGE_Escher_MG1655: IS2 transposase TnpB; C5Y66_20275; phage(gi16132094)         1.21e-172           EscherichiacolistrK12substrMG1655LWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
3925011..3925022                   attR                                                                                 N/A                 TAACGGCAGCAA
3925131..3926327                   PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; C5Y66_20280; phage(gi209427727)     8.71e-174           EscherichiacolistrK12substrMG1655MITDVWKYRGKSTGELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN
complement(3926347..3926457)       transporter; C5Y66_20285                                                             N/A                 EscherichiacolistrK12substrMG1655MTIEKHERSTKDLVKAAVSGWLGTALEFMDFKSHAC
complement(3926515..3927534)       PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; C5Y66_20290; phage(gi326781942)     8.41e-19            EscherichiacolistrK12substrMG1655MKSILIEKPNQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFTEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPIVIDWLSKGLIKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE
