gi|00000000|ref|CP029096.1|  Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete 437392, gc%: 56.88%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(121764..123161)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CSC26_7017; phage(gi371496158)       2.89e-07            PseudomonasaeruginosaMSSEIAIKVENLSKCYQIYDQPRDRLKQFVLPRMQQLIGRPPSQYYREFWALKDVSFDVKKGESVGIIGRNGSGKSTLLQIITGTLAPTSGSTTTNGRIAALLELGSGFNPEFTGRENVYLNGALLGFSADQINEKFDAIAAFADIGEHLDQPVKTYSSGMLVRLAFAVQVQVEPEILIVDEALAVGDALFQKRCFQRIEKLVSDGTTLLFVSHDQESVRTLTNRALLLNKGRSIEWGLSSEVVLSYRKLLHDEEAAYFASLTKNLVERAAQAPLPSDPPAAEPDAPVAAPANAMPGMGARSDRLSFGDGEVKIIKVETLGSDDQPCSLFYPGERLRIRVTCESFASIDKLNVAIRLRNKEGVKIYSWGTLNQDMTNRAKNMNAPIFWVQRFDAGNRFQVLLECDCALGENLYEVQASVSYEETMNYLSQRMLHWVDEAAFFQVSIKRDEYFFGGVMDLRMSATW
complement(123151..123969)         ABC-2 type transporter family protein; CSC26_7018                                    N/A                 PseudomonasaeruginosaMRSFSVSPIEMFASLWRNRELIKASAKREVLGRYRGSVMGILWSFFNPLLMLAVYTIVFSVVFQARWGGGTGSKTEFAVVLFAGLLMFNLFAECINRSPSLILSNVNYVKKVVFPLEILPAVTLLSAMFHALISLGVWFLAYGLFFGIPHLTVLLFPLIVLPFVMFIMGLSWSLASLGVYLRDVSQIIGVVTSVLMFMSPIFYPVSALPENYRHLLYLNPLTPVIEMTRDVLYWGRIPDIQLLGAYWIATVVIAWLGFAWFQKTRKGFADVL
complement(124007..125014)         PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; CSC26_7019; phage(gi100085)     1.15e-42            PseudomonasaeruginosaMSILVTGGAGYIGSHTCVELLRAGHEVAVFDNFSNSHPEALNRVEQITGRKPILVQGDIRDQLAIESALRQHQCQAVIHFAGLKAVGESVEKPLLYYDNNVVGTHRLLAAMQNCGVTTLVFSSSATVYGEPQSLPLTEDHPLSATNPYGRSKLVIEDMLRDVYRAHPDWRIAILRYFNPVGAHESGLIGEDPQGTPNNLMPYVAQVAVGRREFLNVWGNDYPTPDGTGVRDYIHVVDLAAGHLKALEALNRPQCMAVNLGTGVGYSVLDVVKAFEAASGKPVPYRIGPRRPGDVAACYSDPRLAIQLLGWKAERDLAAMCQDHWLWQKHNPQGYV
124970..125137                     hypothetical protein; CSC26_7020                                                     N/A                 PseudomonasaeruginosaMGSDVTGTARYKDAHTHPPAWAADSMATALRVLASEPEYLPAKHAKSLPVATFLS
complement(125388..126368)         PHAGE_Ralsto_RSY1_NC_025115: hypothetical protein; CSC26_7021; phage(gi691326870)     4.70e-126           PseudomonasaeruginosaMKQMTFADAEYAGKRKQTRKELFLIEMEQVVPWQGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLSLERIPDETTILNFRRLLERHELAAGILAVINGYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDPEMHQTKKGNQYYFGMKAHIGADSESGLVHSVVGTAANVADVTQVDKLLHGEENLVSGDAGYTGVEKRAEHAGRSVIWQIAARRSTYQQLSKRSPLYKAKRKIEKAKAQVRAKVEHPFRVIKRQFGYTKVRFRGLAKNTAQLITLFALSNLWMARRHLLANTGEVRL
complement(126643..127071)         PHAGE_Pseudo_RIO_1_NC_021300: hypothetical protein; CSC26_7022; phage(gi508178065)     2.42e-26            PseudomonasaeruginosaMSPLFTTLAPGLFEVGAKLIDRLIPDPAQREQAKLALFQAEGQQALQEMQVSLSAILAEANSADPWTSRARPTFLYVIYGVILLSVIGSIIGIWWPAEVFQAAENLSKLLNAVPESLWWLFGAGYLGYTGARSFDKWRGVPR
complement(127068..127358)         PHAGE_Rhizob_vB_RleS_L338C_NC_023502: hypothetical protein; CSC26_7023; phage(gi588498690)     7.18e-12            PseudomonasaeruginosaMNEPHLMDGMVVMPHDEFETLLERAAERGARHALSDVGLDGPDAANDIRELRNLLDAFNEAKKTAGLTLVKMLVTGLVLALLAGTIVKIKLFGGPQ
complement(127370..127918)         PHAGE_Achrom_JWX_NC_028768: tail component protein; CSC26_7024; phage(gi971741702)     5.68e-24            PseudomonasaeruginosaMRGFHLATEAHAVREGLYLAAANRYRRRIITLRTELEGLIPTYGDLIAIAHDMPSWGAGGEIVAWDADTHTATLSEPVAFVDGQEHVMALRRRDGGVSGPHAVMPGSDTQEVVFADLPDIPIETGLSAERTHFAFGVAEQWSLLARVIAVRPRGEQMEITCVAEHSAVHSADGSVDSGTDPI
128526..129506                     PHAGE_Ralsto_RSY1_NC_025115: hypothetical protein; CSC26_7025; phage(gi691326870)     4.70e-126           PseudomonasaeruginosaMKQMTFADAEYAGKRKQTRKELFLIEMEQVVPWQGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLSLERIPDETTILNFRRLLERHELAAGILAVINGYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDPEMHQTKKGNQYYFGMKAHIGADSESGLVHSVVGTAANVADVTQVDKLLHGEENLVSGDAGYTGVEKRAEHAGRSVIWQIAARRSTYQQLSKRSPLYKAKRKIEKAKAQVRAKVEHPFRVIKRQFGYTKVRFRGLAKNTAQLITLFALSNLWMARRHLLANTGEVRL

#### region 2 ####
178638..178651                     attL                                                                                 N/A                 CCCCGGCATCAGCC
complement(178700..178873)         putative integrase catalytic subunit; CSC26_7068                                     N/A                 PseudomonasaeruginosaMRSMKTPNLREAYVCRKTIYNAIYALPVGELRKELSSACAKARRRADRAMAVWIGAA
complement(178977..179171)         helix-turn-helix domain protein; CSC26_7069                                          N/A                 PseudomonasaeruginosaMSYSELSVEERVILIGHAQGFSLRRITCLITRSPSTNSRELRRNRGACGCYSARAARQQMQARR
179453..181048                     PHAGE_Salmon_SJ46_NC_031129: head morphogenesis protein; CSC26_7070; phage(gi100068)     6.19e-06            PseudomonasaeruginosaMRINQPLSGRERSFPAEQHLISATDTRGIITYCNDEFAEISGFTREELVGSPHNLVRHPDMPPAVFAHMWDYLKSGRSWMGIVKNRCKNGDHYWVSAYVTPIQENGRVVGYESVRSKPNSEQVRRAEALYARLNQGRPAIGRGEAFAQLARFFVLPLLGVVSGAALWSLELPGTALWSLELPGTALLLTLVLLGLQGFASLHNSSQLLGRARAVAPKTFDSPLVARTYSDASGPMALLHLALISEDARIRTALCRLGDFADQTAALAKENGRLNEQAERALQAQRNEADQAATAMHEMAASINQVASHVQQTAQEARQASELAMAGAQQSQQSRQVIEQLAQTVDGIGQSVQSLADETASIQQAASMIHAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTRQSTDVIQGIITDLHKETERALSVARAGSEEARNGVARVAQTEQSLQGISQTVDNIHQMAEQMAAAAEQQSLVAEDIARQINSISQATNDNAEVTGNSARLGSQLQSTAGSLHALVERFNS
complement(181177..182688)         PHAGE_Stx2_c_1717_NC_011357: transposase; CSC26_7071; phage(gi209447153)             1.38e-98            PseudomonasaeruginosaMSPAAFDHLTPEQLRQLAAQLSQRVDHLETLNQRLNHELAVLRRHRFARRSEQLNADQLNLLDEMIEADIAAIEAELETARPEPAKREPRQQPKRAPLPAELPRTLILHEPDSTQCACGCQLKRIGEDVSEKLDYTPGTFTVERHIRGKWVCAQCETLIQAPVPAQVIDKDIPTAGLLAQVMVAKFADHLPLCRQEKIFVRAGLAIARSTLAQWVGACGVQLQPLVDALRDCLLQQDVILADETPVQMLAPGTKKTQRAYVWAYAPSPFADLKAVVYDFRPSRAGEHARSFLGDWQGKLVCDDFAGYKASFEQGVTEIGCMAHARRKFFDLHAANQSQLAEQVLQYIGQLYGVEREGRELLAAQRRQLRQDKARPIIDGLHSWMLGQRQKVPEGSAIAKALDYSLKRWAALVRYLDDGNLPIDNNWIENQIRPWALGRANWLFAGSLRSGQRGAALMTLIQSARLNGHDPYAYLKDVLMRLPTQKASALAELLPHNWVSAGKV
complement(182752..183087)         PHAGE_Stx2_c_1717_NC_011357: transposase; CSC26_7072; phage(gi209447152)             8.74e-07            PseudomonasaeruginosaMIRIERIWLATEPLDMRAGTETALARVVQVFGAAQPHCAYLFTNKRANRMKVLVHDGFGIWLAARRLNRGRFVWSGNWQGQQLELSPEQLQALVVGLPWQRLGPNAEIRLL
complement(183084..183419)         PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CSC26_7073; phage(gi209447151)     5.72e-08            PseudomonasaeruginosaMPGQRRSYPKSFKAQVVEECTQPGASVAGVALSHGLNANLVHKWIRRQQAQLPAVPSGFIPIPLVPSVPATPSAADRAIQIAIPHRAGKLSVQWPGNDPEGCARFLRELLK
184048..185133                     pucR C-terminal helix-turn-helix domain protein; CSC26_7074                          N/A                 PseudomonasaeruginosaMFDLDHSLAQEIADRAMAILPRNVNVMDSQGLIIGTGEAERLYTRHEGAQLVLANNRAVEIDSAAASALRGVQEGVNLPLCLDGQLIGVIGVSGEPEEVRTFAEMVRMTAEMLVAQRKDQQHQIWLQKRTEDVLSAILLSGQSAQRAIVEAQRLGLKPDLRRTAILLELANPSDIEQVTRWIQHQVADAWCVPLHASGMVWCPPRTVPPDFRERVTRAGISLSRVAIGTPNIETGSLRSEVEQLSDLMAYAQAKIPDIQWLDLAAHRIPVAVWRHRSEDGFRQLAEPYLSLQQEDGNGQLRKTLRCWVEHGSDGQACAEALNIHRNSLRYRLERIADITGFDLASPKGITELYLAMILAAE
185258..186403                     PHAGE_Strept_20617_NC_023503: glycerate kinase; CSC26_7075; phage(gi588295078)       3.79e-39            PseudomonasaeruginosaMKVVIAPDSFKESLSADLVADAIALGVRDSAPDAEIVCVPMADGGEGTVDAVLAATRGERRFSRVRGPLGAEVQAAWGWLSESRTAVIEMAAASGIHLVEPAARDVTLASTFGTGQLVLQALNAGAQRIIMGFGGSATNDGGTGMLRALGAKFLDSAGDELEEGGLALNALRRIDLSSLDERLHKVRIDVACDVDNPLTGPKGASHVFGPQKGASPDQVLALDEALAAYADIVAEQLQEDVRDFPGAGAAGGIGFAAKAFLEAEFRPGVQLIADLSGLSLAVQGADLVITGEGKLDEQTLYGKTPAGVAAIAAAAGVPTVAIAGTLGAGYQRLRNIGIVAAFSITSGPMTLESACADAAMLLRHRAAELVQLWKVARVGVS
192812..192825                     attR                                                                                 N/A                 CCCCGGCATCAGCC
