gi|00000000|ref|CP029332.1|  Mycobacterium avium subsp. hominissuis strain MAC109 chromosome, 5188883, gc%: 69.11%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
3668735..3668748                   attL                                                                                 N/A                 CTTCTGGTCGTCGG
complement(3682028..3682291)       PHAGE_Mycoba_Bernal13_NC_024135: terminase small subunit; DFS55_17135; phage(gi640883689)     1.75e-17            MycobacteriumaviumsubsphominissuisMRKPTGLGTAGSKLWRTVTDTFDFEDEPAKVHILEQACRVADIVAELDEAANEAPLTVRGSMGQPVISPFIAEARAQRALLAQLVGRL
complement(3683296..3684162)       phage major capsid protein; DFS55_17140                                              N/A                 MycobacteriumaviumsubsphominissuisMLCHEPHPPHRRKRHQSRDGSDQAQSWLPEDFGKMLDLVVQAKSVAALASTLFPTNKQKVAFPLWVADPAVGWYNELDEITAADGDTDEVEVTPSKTAGLTLVSNELADDSDPAVANQIASALANQIAHAIDAAYFANTTAKGPNGLLSLASTAVDPGTSVANLDAFVSARYAAEAHGAKLTHWLLSPAVAETLSKLKIQSGSNQSLIQFVEDGITVAGLPVITSTHVDADTVAWGVDKTQQRYVLRSGTTVERFDSVTNDGLYIRAISRIGVGFLNPAGVVRLYHAS
3684151..3685370                   PROPHAGE_Escher_Sakai: putative transposase; DFS55_17145; phage(gi15832212)          2.68e-18            MycobacteriumaviumsubsphominissuisMTKHYPVEQRERAVKMVLDHLGEYRSVYAACQVIGPKVGVGAESLRRWVLQAQVDAAQRPGVTSAEQQRIKDLEREVRDLKEANEILKAASIFFARELDPRHRSADSLTRCGSADTGSSRSATCSPSKVWWSPHARTATGRPPRHRRARSAMPSSPMRCGPRSAHRRACTGGARPPTYAARAMRWRPAPWIGCAMRGCQASCGVVSTGPRSPVARMRAGHRICSIATSPPRPPTASGSPTSPTPEPGWGLSMWPSWWTAFPGPSSAGMRPPSRTPRWLPRRRWRCGAAITPTAVWVTASTTATPARSTHRSHLRKRLCWTGLRHPSAVSEMPTTTPWPKRRSVCSKPKPSAGTAHFSPVRLRRSTTSNTRRWSGSTGTTTAACTVCSTTSHPRSTRLPTTLAA
complement(3685828..3686292)       PHAGE_Strept_phiSASD1_NC_014229: gp26; DFS55_17150; phage(gi298103491)               1.94e-05            MycobacteriumaviumsubsphominissuisMTVEATTVEAVIPGAESPVDGQTIPGQGIARDGDSEAPKGNREARYRVERNEAREALAQAQARIEQFQLREVERFAGDLAQPSDLLEIGGNSLADFIREDGEVDPELVAEAVAALVEARPGLAKNPRQPAVDPSQGLGGHSGKASPTWGDLLKS
complement(3686289..3686483)       hypothetical protein; DFS55_17155                                                    N/A                 MycobacteriumaviumsubsphominissuisMTFEEWLIHHEPYDAAIRADGDVPWHERPEHLARITERLGLPAGTPAIDVRRTLFNRSKKETNR
3686924..3688141                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; DFS55_17160; phage(gi557307612)     3.36e-17            MycobacteriumaviumsubsphominissuisMEDWAEIRRLHRSEKLSQAAIARRLGLSRNTVAKALDSESPPRYERAPVMTSAWAQIEPAVRAVLSEYPTMPATVIAQRVGWAGGHSWFSENVARIRSEYAPVDPCDRLVHLPGEQVQCDLWLPGRVVPDHAGVLRSFPVLVMVAAYSRFIAAVMLPSRVTGDLLAGMWLLLSQCIGAVPRTLLWDNEAGIGQRGRLAEGVAGFCGVLGTRLIQARPYDPETKGLVERANGYLRSSFLPGRQFGSPAQFNTQLADWLAQVANPRTHATTRMIPAQALGADRAAMAGLPPVAPSTGTTMTTRLGRDYYVSIGGNAYSVHPEAIGRMISVSASLDRVVARCGDRVVADHQRLWGTAGLASDPEHRAAASRMRETFRNRPAVAAHLDIEVQVADLGTYDAVFGTGEVA
3688141..3688953                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; DFS55_17165; phage(gi557307613)     3.68e-65            MycobacteriumaviumsubsphominissuisMATKRAPAPGEADKLIAHQARLLKAPRIAAHYSRLAEQGRAAGWSLEDYLAAVLAVESNARAESGARQRIRYAGFPAIKTITDFDFTAQPHVDRAQIARLEAGGWLAEARNIVLLGPPGTGKTHLATALAIAAAQAGHRVAFAPATGWITRLAEAHRIGRLDAELRKISRIGLIVIDEVGYIPFDTEAANLFFQLVSTRYEKSSIILTSNLPFSRWGQVFGEATIASAMIDRIVHHADVIALKGASYRIKHTAIESLPSVEADRQADSTP
complement(3688942..3689928)       hypothetical protein; DFS55_17170                                                    N/A                 MycobacteriumaviumsubsphominissuisMSEFSKLTWLRESRPIIRTLTTTQRDVLDVIFDHANPDGTNAFRSQEQIAEAIGKRERQVRNVLGQLRELGLIVRTERGNRRLGKADVYALGSPAISDHRQSKVAGNDADGITGTPTLPVKPETEADYRQSADALPAISGVITGNPALPPNRPCTPDPGPIDPGIGKGEDDPRGESEHSAEFASCTQPGDYEPDPFRSDSPSGGDAHRRIADPFASLPSGSSAQGDSWGYSSGEHETSSEDAAGVRGSNFSSAESSAGSDDPEPGEPESVPVPRRPEVTEGRTQPLADPPSEQNQAKALELGERLSNVASGRILSSFFRSKSEQGLRG
complement(3689921..3690187)       hypothetical protein; DFS55_17175                                                    N/A                 MycobacteriumaviumsubsphominissuisMNIRSTKLEDWAIPEDAKQYIRDLRQENGRLRTQLKGKGMQIRPGVDVLPVKTRNELKRLRDEAGKWRRQFRAAQAELSELKAARADV
3691127..3692615                   IS21 family transposase; DFS55_17180                                                 N/A                 MycobacteriumaviumsubsphominissuisLKSARERMNIISAYHQVGSYRGAAELCGTTHKTVKRVIERAEAAAGTTATQPRRVHRSSRHPSREITRQDVGEADAADRPSCRVSGLGPLPPPGSRAESIVAQRPASTPSGGLVTRLSGDGLGRSCTGVDGVLRGAGLFAVAVCAVRRRRESLDHAGDDRRSPRGDRWGSGQDPGRPDGLPQRWCRRQCCCSNTGLCAIRVPLWLRSGLLPRCGSAIEGHRGEPLWLRSGRPCGAAADRSCVSRAGRPTCPQRPGATMVRRGQCHGPLGDLRRAQRSLGRAHRLEGAALAAADDRLGVGAPGRRPLVHPLRLSSLLGASAARRCHRGGGGRSWRPDPVGTCDRCDRGRARARQPRGVHPRTLRRTQTRTLAWSSPENPSRETILRIGNRSAAVPRRCCCDRQHPTEIRTRHSARPWRRPRRTGFDRAAPGGCVSPVPRCRRALDPGRRRRHPTTPPRRRRTRARSAHRRDPLVGGLQDQHHRRDGLMA
3692612..3693406                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; DFS55_17185; phage(gi557307613)     3.67e-40            MycobacteriumaviumsubsphominissuisMTTAAKPVAPSSAAPLAADLDAALRRLKLATVRRNAAEVLQVAKTQRWTPEEILRTLVEAEIAARDASNTANRLKAAAFPVTKTLDGFDVTGSSITAATFDYLSSLEWIRAQQNLAVIGPPGTGKSHLLIGCGHAAVHAGFKVRYFTAADLIEVLYRGLADNTVGKIIDTLLRADLVILDEIGFAPLDDTGTQLLFRLVAAGYERRSLAIASHWPFEQWGRFLPEHTTAASILDRLLHHASIVVTSGESYRMRHADHKKGAAKN
complement(3694061..3695280)       PROPHAGE_Escher_Sakai: putative transposase; DFS55_17190; phage(gi15832212)          2.68e-18            MycobacteriumaviumsubsphominissuisMTKHYPVEQRERAVKMVLDHLGEYRSVYAACQVIGPKVGVGAESLRRWVLQAQVDAAQRPGVTSAEQQRIKDLEREVRDLKEANEILKAASIFFARELDPRHRSADSLTRCGSADTGSSRSATCSPSKVWWSPHARTATGRPPRHRRARSAMPSSPMRCGPRSAHRRACTGGARPPTYAARAMRWRPAPWIGCAMRGCQASCGVVSTGPRSPVARMRAGHRICSIATSPPRPPTASGSPTSPTPEPGWGLSMWPSWWTAFPGPSSAGMRPPSRTPRWLPRRRWRCGAAITPTAVWVTASTTATPARSTHRSHLRKRLCWTGLRHPSAVSEMPTTTPWPKRRSVCSKPKPSAGTAHFSPVRLRRSTTSNTRRWSGSTGTTTAACTVCSTTSHPRSTRLPTTLAA
complement(3695678..3696523)       hypothetical protein; DFS55_17195                                                    N/A                 MycobacteriumaviumsubsphominissuisMPHKLRTAGTGELDIWFSFDFDGDPPDALVEALRSKAYQILALLNLGSGDFAIPVMPFQIREMLPDDKADLKFAFDVAVQARRTLSDDEVIGTQLEVAHFLTDPNFGEKYHVALELYVAHLTEQQARVRFILLVIAMEALADKSPKHQVALDLLTRWKQELETEKVKYNDPSEEYYSLQALSNEIDFRGEDSIGNQIRKLFAGLPGTSDEERAELQRRAVRVYHKRSKLVHDGFLPPEELPGLEAEARELLETLFLAAIQQSKPADDRFRIEIEDPPGPRS
complement(3696804..3698108)       PROPHAGE_Shewan_MR-1: ISSod5, transposase; DFS55_17200; phage(gi24373965)            4.24e-25            MycobacteriumaviumsubsphominissuisMLTVVHDQDSSNEDACGSRSLLDEIVRDGARQMLAAALAAEVAAYIDAHAGEVDENGHRLVVRNGYHREREVLTAAGAVTVIAPRVNDKRIDADTAERRRFSSAILPAWARKSPQMTEVLPLLYLHGLSTSDFGPALEQFLGSGAGLSATTITRLTAQWQDEAKAFGERDLSGTDYVYLWVDGIHLKVRLEQEKLCLLVMIGVRSDGRKELVGLADGYRESTESWADLLRSCRRRGMTAPVLAVGDGALGFWKAMREVFPATREQRCWFHKQANVLSCLPKSAHPGALAAMREIYNAEDIDHAQVAIKAFEVDYGAKYPKAVAKIVDDADVLLEFYRYPAEHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGIAMAYKLIDAAQARWRAVNAPHLVALVRAGAVFHKGKLLERPVDITPPEPAESAETEVA
3698185..3698622                   hypothetical protein; DFS55_17205                                                    N/A                 MycobacteriumaviumsubsphominissuisMRPFLTRPAEAHPQVLIIALATQDALPLRSHSSNLFPDCGTDTDETPSDPSSTTKDARSLSSYDQPLVAEEVNCEGTSGRRHRHLVGGNVLHLEGHWSPRRGRAVGHHRCGHIRSHNHGGKDDRIHQRKPHRVSRQQNHALLLGR
3698414..3698427                   attR                                                                                 N/A                 CTTCTGGTCGTCGG
complement(3698673..3700232)       PHAGE_Mycoba_Smeadley_NC_028860: integrase; DFS55_17210; phage(gi971749971)          4.01e-135           MycobacteriumaviumsubsphominissuisMDDDKDNTRKVSHLAQTEEGERWAEAHDYTIVGRFEDLGISAGKTTPFERPDLGKWLDPERLHEWDVLVFSKIDRAFRSTNDCVEFAKWTKTNRKILAFAGDGVVLDYLHPKKDSLDQMMSEFFIYVGSFFAAIELSRFKTRATDRLDYLRMTDRVSHGVPPLGYQTVPHPSGKGKALKRDPEGYKLLHEIKTKLVDENQSLTSIARWLNEEGKTTSVSKARGGGKWSVTTLKRVLTSQRTQGYRVMSVFEPAPTESNPDRKRRTGEKLVLDAEGQPIRMAEPTFSEEDWTRIQAALGDRTASGTARQMTPNPLAGIGYCVCGYSLALHRRKSSSGKLHTYVRCGRSPDGCRGAVKLADTELILEENFLDAYGDREMQRLVFVPGEDHSQELAQTEQSLERLRWESDNGLVDDDALYKSRLSALVARKAELTANTVVPARWEPVGTGKTYRELWTDEATDRRQVLRDSSIRLVLHCPPRGTTTQTKVIPWEIQVPPEWPEPTLTEEQQAIRDALGQSAL

#### region 2 ####
4951803..4951814                   attL                                                                                 N/A                 TGGCCGGCTTGG
complement(4961758..4963130)       PHAGE_Strept_phiSASD1_NC_014229: gp23; DFS55_23455; phage(gi298103488)               2.60e-39            MycobacteriumaviumsubsphominissuisMTDNQLLTHLMQKLDEPAARYHELNLYYQGEQPLAFLSPEAKIALGQRFGRMASNIPRLAVTALAERLRVTGFTGDANDLWPDWIRNDLDQLSGVAHREALLLGDSYVIVWADKLGRPKVTIESAKQVVAQHDPGTRQIIAAAKRWETKTTTEVMLYEPDQISHYRANTTGATTVGYNLVDTLANPLGVVPVVGLRNGDLILGRHGSSEIDDLKPLVDALNKLLIDMMTTSEYTGRPRRWATGIELTEEPVLDENGNVILDDEGQPVTTEVNPIPEGNRAMLAEGPEAKFGQLDAATLTGYENAVNILLGQIMAVSTLPAHYVGVFTDNPASADALRAAEASLTARAEARQATFGRAWEQVAKLMLAVRDGRDPLQIEARVQWADAATRSVARRRMQSSSCIRPTCCPPRMHWRSSVTPTTRLLRSALRGALRPLTPRETSQVSRRGRLNRGRRHGA
complement(4963127..4964602)       PHAGE_Strept_phiC31_NC_001978: gp33; DFS55_23460; phage(gi9631142)                   8.26e-53            MycobacteriumaviumsubsphominissuisMKAGPKASVDSTSLPWRPRSVGSARFGKFCERFVKVPKGTGARSPLKLRPWQRDLVGSVLDAIPQPRTAGWMLPRGSGKSSLVAAWGLYELFEGGEGATVCVVAVDERQAGIVFGIARRMCELDDDLARRVQIFKERLVIPARDAQFHCLPAEPKRLEGLDYTLAILDEAGVANRDSYEVLTLAQGKRETSTLVAIGTPGPNLEDQVLLDLRQYAAEHPKDTSLVWREFSAAGFEDHSVDCAHCWELANPALDDFLHRDALHALMPPKTRESTFRRARLCQLAADTEGKFLPGEVWDSLSTGKGVPDRAEVVIALDGSFSDDTTALLVGTVSPEPHFDVVGVWERPQRKDTEYRVPIADVEAAIRACCRRWQVVEIIADPFRWTRTLQALEAEKLPVVEFPHSPARLTAATTDLYSAAINGRMTHSGNTKLAAHIAAAVIVEDARGMRLSKQSRSRTAPKIDLAACLVMAHSRATWRATHKKRKKTRSFAA
4964617..4964832                   hypothetical protein; DFS55_23465                                                    N/A                 MycobacteriumaviumsubsphominissuisMIWVTHLEPVPGEEQLVKTNFSDWKYAIDPSGALNLTNGKEKVVFGPGFWVRIDDDTGPPKRTPAKVHRVR
complement(4964835..4965218)       hypothetical protein; DFS55_23470                                                    N/A                 MycobacteriumaviumsubsphominissuisMTLKPCVVCGEPSAKSRCPSHRPKDRKPSRQQRGYDAAWQELSRRARRLQPWCTDCGSTEDLQLDHLPSAWERKAAGKTIRLGTDTEVVCGSCNRGRGKARGGDPNRTGQHPHAKAQGALHTGGGYV
complement(4965215..4965478)       hypothetical protein; DFS55_23475                                                    N/A                 MycobacteriumaviumsubsphominissuisMNDRQIDDYVPPLDAIALTPQSIDFFYAAPGGNELIGMMLHTDNLGELAVLFTPEAARKVATSLTSMAVTDLDRLRHQHRQQKATDQ
complement(4965700..4966851)       PHAGE_Mycoba_Firecracker_NC_023712: gp20; DFS55_23480; phage(gi593776533)            6.44e-61            MycobacteriumaviumsubsphominissuisMTDEFWSSRPALQHVLTLARARGVGPWATLGAVLARAIATVPPEICLPGIVGSRMSLNLFIALVGPSGGGKGAAEAAALDGFSLPYVEIVPLGSGEGINRTFRPVGTKPDEPNPVTAAIFSAAEIDTVAAVASRQGSTLSSELRKVYSGEQLGFANAGKDTRSIVAAGSYRACLTIGVQPLRSHTLLGASDGGLPQRFVWLPTSDPDAPDEPPPDPGKWKVSRPSWLRAIGSTVDLIVPETASKAIRAHRLAVLREDPHVDPLDGHALLTRLKVAAALMALDGRTVVSAEDWSLAGYVMDVSNYTRERCQRALAEQSRSANAGRALAAADREEIISDRKLQRAKEAILRKMADGRQLPRHLIRTSLKADLRDYFGPALDALLTE
complement(4967077..4967487)       hypothetical protein; DFS55_23485                                                    N/A                 MycobacteriumaviumsubsphominissuisMTQSSDTDQDGRFSGDRYERLVQAAEVIASDPGIENADSLFNGEFLRTFIRELVDARVLDGLTERDCNTFAMLVVLDTRLGPSRLAWRIHRWLEGDHLDRNTDSDNPFAVCSALASALKIMLDGFVEAFAAQDAKS
complement(4967582..4967773)       PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; DFS55_23490; phage(gi423262035)     8.41e-05            MycobacteriumaviumsubsphominissuisMSLPPVATARQLADFLGTTEASLAQDRYLRRGVPYTRVGRRIRYLREDVLKYLQANRISGDAA
4967910..4968443                   PHAGE_Mycoba_Dylan_NC_022325: DNA binding protein; DFS55_23495; phage(gi543170549)     6.21e-18            MycobacteriumaviumsubsphominissuisMAGKKLELDETGRAVAENITRIRTARGLNYTELSKNLMRLHRDITPLAVRRIEEGQRRVDVDDLMAIAAALNVSPAALLMPRATRTDELVQTTAMAEPATAERVWDWVAGEQPLVPYGDLSGNDQWVEFAHASWPAWRVREMYDQMYQGAVEEARREGRDLAKEVAALEARDDHGDD
4968309..4968320                   attR                                                                                 N/A                 TGGCCGGCTTGG
4968430..4969590                   PHAGE_Mycoba_Minerva_NC_026584: integrase; DFS55_23500; phage(gi764159278)           4.19e-37            MycobacteriumaviumsubsphominissuisMATIEKYETASGVTLYRVRYRKTDNRQTDKRGFRTKKAAEAFANTVEVKKLTGEFIPETAGRITVAELDWLTRKKQATAPSNYRMIESAWRVHVLPKWGRWQVAKVTVPDIESWVAQMVRDGRGATTVLRAHGVLSGVLGDAVKARRLASNPARGIEGLPRKSARRHVYLSADDVHRLAAESGEHRPLVYVLAFCGLRWGEAIALRVRDVEFLRRRLVVAENAVQLGVDHAVGQTKGRAVRSVPVPSFVLDELSPLCSDKEPGWLVFAGPDGKYLPRPKSSGGWFAGAVKRSKVQPITPHDLRHTAASLAVSAGVNVLALQRMLGHKSAKVTLDTYADLFDTDLDAVAVTLHKSYSLEKCGQSVGTEWAGSGSANKEIGLYLQCRV
