gi|00000000|ref|CP029995.1|  Salmonella enterica subsp. enterica strain SA20053897 chromosome, 4920300, gc%: 51.98%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1263148..1263723                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; DOE57_06365; phage(gi712913000)     1.31e-09            SalmonellaentericasubspentericaMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1263755..1264405                   anti-sigma-E factor RseA; DOE57_06370                                                N/A                 SalmonellaentericasubspentericaMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1264405..1265361                   sigma-E factor regulatory protein RseB; DOE57_06375                                  N/A                 SalmonellaentericasubspentericaMKQLWFAMSLVAASLFFSVNASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDSRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSTMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1265358..1265837                   SoxR-reducing system protein RseC; DOE57_06380                                       N/A                 SalmonellaentericasubspentericaMIKEWATVVSWQNGQAVVSCDVKASCSNCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQVLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1265867..1265983                   transcriptional regulator; DOE57_06385                                               N/A                 SalmonellaentericasubspentericaMGWRPNKYALFLRCSVLQEKSEAFSSSRSPYTMNISSP
1266304..1266315                   attL                                                                                 N/A                 CCTTTCAGATGG
1266335..1267564                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; DOE57_06390; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaMAISDSYIKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGIWTVPWENHKTGRKSKKPIIRPIIPEMLPLIKRAIELAPGRFVFSKYEDKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1267542..1267826)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; DOE57_06395; phage(gi169257265)     9.25e-64            SalmonellaentericasubspentericaMSKKIRDFELMSTREICCQLRISSRTLDRYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1267867..1268106)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; DOE57_06400; phage(gi169257264)     1.19e-52            SalmonellaentericasubspentericaMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1268149..1269231)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; DOE57_06405; phage(gi169257263)                 8.13e-129           SalmonellaentericasubspentericaMENKNITIADQNAVVNSNIALFDSQYLNAISAFAQMMSQGSATVPRHLQGNAADCMAVAMQAAQWQMNPFAVAQKTHLINGVLGYEAQLVNAVISRSGVLASRFEYEWYGPWEKVIGKFNIRKGDKGEYRVPGWTMADEEGIGIIIKARLKGEDQPRELDLLLAQARVRNSTLWADDPRQQLAYLAVKRWARLFCPDVILGVYTPDELDEREEKIINPAQSTQSITMQDINADNQQTTSTQEADVNIDDAAEKFRARIDSAETLEDATAVGNDINTAKPALGTALFTELKNKATRRYHLVKHRAMLDEAINGLPQPGSPDAATRFEAVEKKLSAAKRHLGDELHDKYRITLDDMKPEYIG
complement(1269242..1272145)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; DOE57_06410; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDSYQLAKDNMTWTQIPGVILSSSEAAAAARQHIVDGVDTETGEVLEDHTENFGDESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETNHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGEEAVTVVKLEENQNQDETSQSEPESQQDEPEAVVTWPEYFEPGRYEGIPNEVYHAANGISSTMVKDARVSLMYYDGRHVSKTIKKERSKVLDMGNLVHALALQPEILDEEFSIEPVIPEGALTTTATIRAVIDEHNASLPAQLSADDIKALLEEYNATLPPQLPLGASLEETGQSYMALPAEFQRIEDGQKQTASAMKACIKEYNVTLPAQMKTSGSRDTLLEQLAIINPDLVAQEAQKPQPLKVSGTKADLIQAVKSVKPDTVFADELLDAWRENPGDKILVTRQQYATALAIQSALYAHPEAGKLLQNPTRAVEVSYFGIDDDTGLEIRVRPDVELEYEGLRIGFDLKTISMWDVKEDALKSRLHREITMRDYHLSAGMYCNVADLDKFAWIFVNKDEGYHWVAVVWASESLLELGKLEYRQTIRSIANAMDTGEWPAPITEDYTDELNDYDLRRLDALREMA
complement(1272273..1272623)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; DOE57_06415; phage(gi169257261)     3.04e-81            SalmonellaentericasubspentericaMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKRVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1272645..1272803)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; DOE57_06420; phage(gi169257260)     1.53e-30            SalmonellaentericasubspentericaMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLARKEKEYCSRQCAEYDQMAHES
complement(1273202..1273606)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; putative repressor protein; helix-turn-helix motif; DOE57_06425; phage(gi169257258)     1.00e-17            SalmonellaentericasubspentericaMNFGERLQRVLNETGITQSELGRRVGATSQSVNGWCQSGILPRKDILELLPKATGKPLYWFFMEDDEESDVPERLTQGGPTDLNDRQKRLLEIFDQLPTVEQDRFIELAGTRLQELDDFMAEYQRRRKIEPPSR
1273736..1273972                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; DOE57_06430; phage(gi169257257)     5.75e-17            SalmonellaentericasubspentericaMKVTVQRKILSVCSQAELGRRLGRRAQTVNGWFKNKVPGELVVRVARAIDWKVTPHELRPDLYPNPTDGLPSQEASAK
1273938..1274312                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; DOE57_06435; phage(gi169257256)     1.56e-87            SalmonellaentericasubspentericaMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPVEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1274404..1275330                   PHAGE_Salmon_SEN34_NC_028699: replication protein O; DOE57_06440; phage(gi966201463)     3.24e-160           SalmonellaentericasubspentericaMANTAEVINFPVPDVAPKEPRVADLDDGYTRLANELLDAVMCSGLPETELCILMAVWRKTYGYNKKMDWISNEQLEEMIQKHHTHCSTAKNSLIRKKVLIQEGRRVGMNIHISEWQTKNNGFCKTLAKPAKKTLAEVANAPKQKLLTTKDKLTKDNIKRSTSENSDESSDDRLKRFLSAHPEAAIYTPSGAKWATAEDQQCAEWIFALADKVKPITKKPRIVAWANDVRLMRELDGHTHREICEMFLWASKDAFWYINIRSPAKLRAKWDTLALHREDTTRKPRADFSARKSETGPHWNSAEAWEKFI
1275327..1276022                   PHAGE_Escher_HK639_NC_016158: replication protein 14; DOE57_06445; phage(gi356870655)     2.77e-73            SalmonellaentericasubspentericaMTPDLYRAIQNRDGEMLARMAGDSYEGRKVVNADAEKLVDMLFENLMQVFPASTQTNLRTGDDIRVAKQQWIAAFAESGITSREQLSAGMQKARSSQSPFWPSPGQFISWCREGNGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELIRAAGDILHDWEKRALAGKPIPPVRRALSAPSRDRGPTPAEMLMAKYKQRKDAGLI
1276036..1276506                   PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; DOE57_06450; phage(gi418487084)     8.19e-27            SalmonellaentericasubspentericaMKERGITDGLTMNQLAERNAEHVTTIAALESRCASLSAKLSMINDLMEVAEQANKLAQEAAENLVQERNALAEENTGLKSALNDILQPDAAVLERNHRVRALDAMETPATDAFLAEARAQGVEMFSEKFGGGTPLSNLVKEVAADFAAKLRKGVAQ
1276503..1276937                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; DOE57_06455; phage(gi423262430)     4.31e-35            SalmonellaentericasubspentericaMSNIDKQALLGADKHANQHRLSRLIIEANSAELRAIAEAVEQYTDQLIAALADSEKRIAELEHYKSREERVTKLVLDNSTSWDALYKKLEAAERRITELESKLAKPVLLPKTNGYWNEQEKAYEEAITLAKRQVRLAGFNVEDM
1276937..1277179                   PHAGE_Entero_ES18_NC_006949: gp40; DOE57_06460; phage(gi62362253)                    1.40e-38            SalmonellaentericasubspentericaMAIFMEVRCAGRGDVDGCHSDKNAEPMTTAHESVKGVSAALKFLKDDSLNNGWVLHKGELYCPVCAKAQAWDAAGIGKGE
1277181..1277390                   PHAGE_Entero_933W_NC_000924: hypothetical protein; DOE57_06465; phage(gi9632474)     9.24e-31            SalmonellaentericasubspentericaMPIAANYTMHLYCDCKTCTEESWRGPEFGEYVGNTWSECAKEARFHGWRISKDRTRAFAPRHKISRTNP
1277387..1277830                   PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; DOE57_06470; phage(gi100006)     9.14e-45            SalmonellaentericasubspentericaMTTITREQQKQILIDTANHVISRDNTSPYSENLRELARIALASLDAEPMFYVDVEAAKRVIKGHTRFATITTEPKKGASLPIYLYPPVPVVPEDISGIIERFRYQADHLSDWHHIDEHSCKVNRRDLMTALEFMDSCRAAMLKGKGE
1278333..1278560                   PHAGE_Entero_cdtI_NC_009514: Valyl-tRNA synthetase; DOE57_06475; phage(gi148609417)     4.62e-14            SalmonellaentericasubspentericaNSPVIPGGWISCSERMPEDEQEVIVHNKLGYRYVSYFDEHSGLFFDMRGDNQMNCIEHILVTHWMPLPEPPQEVK
1278637..1278903                   PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; DOE57_06480; phage(gi410491513)     2.59e-35            SalmonellaentericasubspentericaMGGKVPNYQIVYRDETLNYFKPGGYAFFQRLKEYGGGYWLGKIYEDGFEFVLEKPTSLSEGIKHLLVLKSVEDGYLEFVDDIDNFKLQ
1279120..1279497                   hypothetical protein; DOE57_06485                                                    N/A                 SalmonellaentericasubspentericaMSKSKIFVRAWKLARKGANKFGGSAREYFADSLRRVYAANAARSTINNVRYEALRGKPTLNPSDAVELATYHAAEALAMSLLTMHPQEHLEMHQKYSALIPELGALYYDAIISNSYTNGIVIMRR
1279509..1279745                   hypothetical protein; DOE57_06490                                                    N/A                 SalmonellaentericasubspentericaMMAKINEIFGRVNEFGTVDILYVDDGESVTSIEDAPEFIKNIRHIYGVSQPSGSVRYEHDEIIITLNDAMLLGIEIEA
1279747..1280241                   PHAGE_Xantho_OP2_NC_007710: hypothetical protein; DOE57_06495; phage(gi84662714)     1.52e-07            SalmonellaentericasubspentericaMDNEDKIELLEKMGTAIYGSHWKPALASHLGINDRSVRQWASGERAIPDSIIREILSLMHDRANLLARTADMVSREIRKMPECERIIYQTNLKLPEIRRELYTEKRDWFDIDGRLYALNENGSVIDIHGYESDCYGMSVLPDGVTVNDMLIAKNKYIAENGDYD
1280225..1280518                   hypothetical protein; DOE57_06500                                                    N/A                 SalmonellaentericasubspentericaMGIMINQQLTIDLKILASALGCLDRHNLSEIITLGGIACSKSRADAILRGSGAVKNATGNSNMQGTKINRSATVTPDEFHAFCVGLKIWLESLETKE
1280613..1280816                   PHAGE_Entero_mEp213_NC_019720: hypothetical protein; DOE57_06505; phage(gi428782617)     1.82e-06            SalmonellaentericasubspentericaMAASYEVPHFMGQEKQALFGALVCLWRESTDAKELQVGSQHLKNNNPRTPGDFFYLNSLRRGFQPEI
1280923..1281162                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; DOE57_06510; phage(gi169257250)     2.03e-50            SalmonellaentericasubspentericaMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFYAY
1281152..1281457                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; DOE57_06515; phage(gi423262436)     1.35e-53            SalmonellaentericasubspentericaMHIKHRGVADVSRNKVSVTGGYMLEDLPESGYAVIRCYDHCVVARFGSIPDSGRALMYRRGDEISFVPLHPDDIVGTPTLFTQMLEKAGYRITRCFDTLQM
1281497..1282099                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; DOE57_06520; phage(gi169257248)     1.49e-143           SalmonellaentericasubspentericaMAHELQLIKQSSGILIPATPETSNILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNEGALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQDEAENAAAQLMSFAG
1282099..1282305                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; DOE57_06525; phage(gi169257247)     2.13e-43            SalmonellaentericasubspentericaMAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
1282308..1282919                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; DOE57_06530; phage(gi169257246)                 1.81e-145           SalmonellaentericasubspentericaMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASTVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWHQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1282916..1283056                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; DOE57_06535; phage(gi169257245)     4.92e-26            SalmonellaentericasubspentericaMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
1283053..1283742                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; DOE57_06540; phage(gi169257244)     2.26e-124           SalmonellaentericasubspentericaMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETERWIALNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITSWAWCEFRQQLAGRKMAGKTVERLKKLIWLAAQDVREGLAGRYVYQQQELASLCGVKPDNWSHNYADYWRAMSNIFKRLDTESLLCLVKTRSQQKVTFSQQGIAKVN
1283937..1284284                   PHAGE_Entero_SfV_NC_003444: holin; DOE57_06545; phage(gi19549036)                    1.03e-48            SalmonellaentericasubspentericaMKMHNDPHSWQGWLELFQSWWRGDTPLGAVLMSLFMAGLRIAYFGGNGGWKKKTLEILLCGALTLTFSSALEYFGWPKSLSVAIGGGVGLIGVDAIRGFAMKFISGRIGGDNNKV
1284287..1284913                   PHAGE_Salmon_epsilon15_NC_004775: endolysin; DOE57_06550; phage(gi30387404)          5.64e-125           SalmonellaentericasubspentericaMNESQFQQAAGISAELAARWYPHITAAMSEFGITAPLDQAMFIAQAGHESAGFTRLVESFNYSIAGLTGFIRAGRITPDQASTLGRKACEKALPLERQRAIANLVYSKRMGNNGPGDGWNYRGRGLIQITGLNNYRDCGNGIKTELVAHPDLLAQDTYAARSAAWFFATKGCLKYSGDMVRVTQIINGGQNGIGDRRERFEKAKSVLV
1284910..1285461                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; DOE57_06555; phage(gi16765210)     8.71e-17            SalmonellaentericasubspentericaMNLLPVLLKNFWKPLAEILLMAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTALQREVTERAKEQRRQHAADEERKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAQLLGEADDLAGKFAKEADERYVAGSTCEHIYDKVTGNSNGN
1285451..1285864                   hypothetical protein; DOE57_06560                                                    N/A                 SalmonellaentericasubspentericaMEIKLIKYWKVELFEEPKVTASVINGILPIEERSPFLTGYSNTQFDLRKAVINGEEFITLCCDPGSLQTRSVRISRIHEFKCTPIYESDDTFQEAAKPLMKWLVENVHPHHQAIVTSSHAELLESQIVAKTDEFLKG
1285926..1286900                   PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; DOE57_06565; phage(gi431809885)     2.59e-47            SalmonellaentericasubspentericaMAKPDWGALQHQFLAEHAKSGISPKDWCEAQGLNYATARRYIKKPTAQSAQKNAQKKMRTAQAKKSAEKLLNSELTPQQKRFVAEYLIDQNATAAAERAGYSDASYGRQLLTVPHVAQAIAQQQRDSLVRTLASADEVLEKMWQLATFDANEISQYRRGCCRYCWGFGYHYQWRDVVEFTEQKEKVAGKEGAKEPDDAGGYGYNHNREPNPDCPRCNGDGVGRPHFSDTTKLSPIARLAYSGTKLVKGGIEISTISREKMFEAIMRRLGLAESELAQRLLDLEIRKRTAEAERLEQEVELKRKGKGKDDEPTVVIKLVNSPDGD
1286890..1288161                   PHAGE_Salmon_SSU5_NC_018843: putative terminase large subunit; DOE57_06570; phage(gi410491412)     9.25e-17            SalmonellaentericasubspentericaMATEHVIEFLPFHAGQKKIYRSPAKRKVIRAGRRFGKTTMLEQAGGNWAARQMRVGWFAPSYKILLPSFKTIRDLLKPITISSSKTDSIIELIGGGQVEFWTLDNPDAGRSRKYHKVIIDEGSLVKKGMRDIWEQAIEPTLLDFDGDAVMAGTPKGVDDENFFYQACNDKSMGWEEHHAPTAANPTINPAALARIIDGRPPLVVQQEYNAEFVDWRGQNFFKLDWLLENGAPVDYPFSCDTVYGVVDCAQKGKLQNDGSACIWFALDNLPSPHLIILDWDIIQIDGYFLKDVVPQWEGKAKHLSEICRARMGTTGLFIEDKATGITLLQQGANEGWNVHPVDSELTSLPKESRAINISGYVASGKVRISKYAFDKIVEYKQSKKNHLLTQVLQFIIGEENQDDDLFDCFNYGVALGLGNGEGF
1288161..1289591                   hypothetical protein; DOE57_06575                                                    N/A                 SalmonellaentericasubspentericaMQDDDDICMGSNAGVLSKILEGGSIEPGAQAGYELCKLIYLFHPLGGKMVDRPIKLAMSEPRTVHVTRGPEKRLREAFEREWKAIKADRIIANTARQSRIYGVGAVVMLIEGEPTNDAVGFDTLYKKSITFNVLDPMNTAGSVVLNQDPNSADFQKVGSVTAAGQPYHHSRCCVMMNEDPIYLAYTPSSFGFAGRSVYQRALYPLKSFIQSMRADDMVTIKAGLLVAFIKQASSIVNNMMQKMSGIKRWMLKRGGNGDVLQVGEHDKIESLDMQNLEKPLDTARNHILANIATAADMPAILLNSETFTRGFGEGTEDAKAVAQYIDDVRKDLQPLYDFFVRIVQYRAWSPEFFEALKNDLPEYKIISWEAAFSSWVNNFDYVWPSSLKEPESEKVKVDETRFKAITEMLTVLLPQLTRDPQNRATLIKWACENANMNENLFADRLELDYEQLEQNPPDATPPGEGNFDELLSERAA
1289563..1290438                   hypothetical protein; DOE57_06580                                                    N/A                 SalmonellaentericasubspentericaMNSFLKELRDAIKFFLEHGYSSEESLIMWTERLRNATEDKIGGDDFYRYVSRRLTAAYDLEVGRERALKRHPGVSRFTLNYLEPKLRAELDRRIMASADLIKLNRTQAVDRTIQRFSGWATSIPPITSISPGLSASSRSGVVATSQHIAKSARQIDFERRRVMVDQTHKLIANIDNIIATDGGAIAAVWHSHWRQPHYDYREPHKDRDLKTYAIRGNWALKKGFMKAGPAGYLDEITQPGEEVFCRCYLTYIYNVRSLPDEMKTEKWRKFTEGNMSVGRRTANFEGFRNGG
1290439..1292013                   PHAGE_Burkho_Bcep1_NC_005263: gp18; DOE57_06585; phage(gi38638625)                   9.94e-23            SalmonellaentericasubspentericaMNTYAAGILFKSGGKIFLVKRGDDGSWAVPGGKLEEGETPEAAAKREVLEECGFDYSAPLTPHTLIDGYVTYLADDAEQFDAVLNDENQACGWFSPDELPEPLHPGMVAMLDAEPLNEKDVAGLIADGQLTSPQFFRNMYLWALRITGTGVTWRSKFRQYAYRSPENYLTDDFLARCSGLPVIWLHPEKNTLNSEEYAARTIGAIAFAWIQGDEVWGMARIYDTDAATILSTRQLSTSPTVTGGDDVLINVDGEPLLLEGNPVLLDHLAICEQGVWDKLGEPTGVKSDTLLNEVQKMDEEKVLALINQALDAREARAKADAEEKAKADAEAAEKAKADEDAARLKEEEEKAKADAEAKAKADAEAEEKAKADAELEKIRADMEEMKSRVPQELSDEERNEIADTQCKADSVFASFGERAPQPMAGERAMPYRRRIMTRLQKYSSDYKEVDLHAIADSQLLSIAEKKIYADAQASAASSLEPGAGLREVIRTDATGRRISTFIGDPSATWAPFQAVSRKVAGIKQ
1299891..1299902                   attR                                                                                 N/A                 CCTTTCAGATGG

#### region 2 ####
1398072..1399538                   PHAGE_Staphy_42E_NC_007052: ORF012; DOE57_07055; phage(gi66395520)                   1.43e-36            SalmonellaentericasubspentericaMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKAERKPNSCKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCATIDELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS
1399608..1401185                   GMP synthase (glutamine-hydrolyzing); DOE57_07060                                    N/A                 SalmonellaentericasubspentericaMTDNIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIREFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEGSNEREFGYAQVEVLTDSALVRGIEDSLTADGKPLLDVWMSHGDKVTAIPTDFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVMDMFGDHFGLNIVHVPAEERFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE
1401227..1401245                   attL                                                                                 N/A                 AATTTAACCCTCTGTTTTT
1401378..1402631                   PHAGE_Escher_phiV10_NC_007804: putative integrase; DOE57_07065; phage(gi89152450)     0.0                 SalmonellaentericasubspentericaMLTDTKLKNLKPQEKLYKVSDRDGLYVAVLTSGSVSFRYDYRIHGRRETLVIGQYGRDGISLAEAREELIAAKKLLNAGQSPAAAKRDGIKKIRGAETFTVHTDEYMKHVILADSTRAMKQAVIDRDILPVLGNKKMAEITTSMVRDLCDRIVERGGRATAVQAREIISSVYRYANDRGHGLFNPAADIKPSSIAMFKPRERTLSPEEIGIFFRALDDVGAMGTMKMALKLVLLTLVRKNEFISATWPEVDFKKWTWTIPAGRMKAGRAHVIYLPKQAQDLLVGLQMCAGGSEYLVPGRYNFRRPLSNAALNSLINRTVEEINEDGEKIQNFTVHDLRRTASTLLHEAGYPSDWIEKALAHEQKGVRAVYNKAEYARQRAYMLQQWADMVDAWINGEHTDLVPFSPSKFERWMSEGD
complement(1402628..1402807)       PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; DOE57_07070; phage(gi374531222)     2.19e-34            SalmonellaentericasubspentericaMTMFNEAELIRQLEEQRAVIVQKSAQVNWLQTENSVLHKKCEELQMTVELQREFIKSRN
complement(1402804..1403451)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07075; phage(gi100029)     2.49e-151           SalmonellaentericasubspentericaMTKKYTLIYADPPWVYRDKAADGNRGAGFKYPVMSVLDICRLPVWDLAAENCLLAMWWVPTQPVEALKVVEAWGFKLMTMKGFTWHKTNKHKGNSAIGMGHMTRANSEDCLFAVRGKLPTRMDASICQHVTAPRMENSRKPDIIREKLVQLLGDVPRIELFARQSSHGFDVWGNQCEGPAVQLQPGYALDIAGMAKALKNAPLSPSDNQGRERAA
complement(1403444..1403743)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07080; phage(gi100032)     8.80e-52            SalmonellaentericasubspentericaMSKLTRLEKYHLNYVSQRQASKAVAVTPAAMEVEKRAIARESKGQFRIAARLWLLCMDAAHGEVERARIAVRRDQCITKSNGLRRGDYSGVCCRGVVYD
complement(1403853..1404101)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07085; phage(gi100034)     5.54e-53            SalmonellaentericasubspentericaMKGALGKKELLAVVPLSWSTINRMERAGEFPKRWYITDKRCAWNKDEVERWLDERQAQSPAEFQGKKPPVDQRVYRPVSNAA
complement(1404151..1405068)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07090; phage(gi100035)     4.67e-35            SalmonellaentericasubspentericaMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLDPLLKPVHLVPMSVKDSKSGRNEWRDVVMPGIGLYRIQADRSGDYAGANEPEFGPDVTQTLSGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATGGRDTSAPNAMWKKRPYAQLAKCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRNQAKHGTASSMNSLINSKPEQEQEDRQQHKDDRGPEEILHAFSGAAMNCNTQSDLDKAYKYVAQKLAGDDGLLAKATNVYTIRCDELNEVPM
complement(1405065..1405886)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07095; phage(gi100036)     0.0                 SalmonellaentericasubspentericaMKPGIYYDIPNDAYHAGDGVSKSQLDMVAKNPALLKWVKAAPEDEEKKSALDMGTALHCLLLEPEEFDKRFIVAPEFNRRTNQGKADEAAFLKYVAGMGMTVMDAEQGRKLKLMRDSAMAHPAARWMLEAPGHCEASMYWNDDETGELCRIRPDKWLNEHNVIVDVKKVADMDRFARHIEEFRYHVQDAMYREGALKVTGQPHGFFFLAVSETIDCGRYPIRVFQLDAPDVDAGHQLLRRDLNTYHECRISDEWGGVEVIKRPEWARKQDMYV
complement(1405883..1406182)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07100; phage(gi100038)     3.73e-25            SalmonellaentericasubspentericaMNVNQQNNLQKIMSAFEKDYRLSEQFYDRQVELIESIRLHQLASTFDVVLDKGVRKEVLEAAKECTEFEELMDAYRREAMAIIAKWDLADQLDGQRDAA
complement(1406501..1407085)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07105; phage(gi100040)     2.12e-120           SalmonellaentericasubspentericaMKSIQDVRRQNLRDLIDREFDGVQTRLAERMATQANLVNRWVLGKKVIGDQVARKIETAAKKPRNWLDIDRSLTLDSFTPSGPTDIGVIAAHNLERWMRESDELNSQGKLQRASGISQNTVSRMLNNEVSVSISTLEAIASAFGRHGYELLIPPQDQSAIRYDRSRYALLPQSEKDKIESYIEFVLSQNNKTKD
1407241..1407471                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07110; phage(gi100041)     1.48e-48            SalmonellaentericasubspentericaMSENAQFDFKKHWLALTPDEREAFANEAGTTSHYIQTHLTGKRKIPGKTLMNGLFKAAKSRQWVRTKPELAYFFYS
1407621..1407821                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07115; phage(gi100042)     3.67e-28            SalmonellaentericasubspentericaMEIITRLDAAKAGLKRYYTGKQCKHGHDSERYVYNGHCVTCAINTSLRRQAEIKQLMAEASLQHSS
1407837..1408652                   PHAGE_Escher_phiV10_NC_007804: putative primosomal protein; DOE57_07120; phage(gi89152459)     1.45e-166           SalmonellaentericasubspentericaMSRHATEWAWKTNPGSSSLKLILLSMADRADEYNLCYPSIERLVTDTSLNKKTVQAGLISLIGMGLISDTGERKGATKRVRVFSLNITKNGNIKGNREGGNDPKNGNVPESGNIPKNGMLNDPKNGMLNDPKNGIQNLSVNQSYNQEKERGDKTGGSVPHDPDANNAVMNNFVPPGGPGQLGKFVMHEQWQPSDDFLRKSSLQGIYLDSLPTPQELAEFRVYWMAEGKAFHHAQWEQKLARRLQISRQNKLTSPENNVPHWNSPEAWEDFL
1408649..1409434                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07125; phage(gi100044)     3.03e-179           SalmonellaentericasubspentericaMNNVFTAIQNRDGEAMARLTGSDRQYAGSNNVVNITAERLVDALFKQLKQLFPAAEQTNLKTPAQETAAKQQWIAAFAEGGIRTREQVSAGMRHARASESPFWPSPGQFIKWCKDSKMVLGISIEDVMGEFHRYAKEKSLQPGGPERFPWRHPVMYWIVCDTRRAMYQRQLSEAEVEKHARKLLDEWSAKVVSGHQVPDPILSIQAKPEPMSTPPTGSGNAYHPPGRSFGCMPNAATLGGITPAQWLMDEYRRRKAAGLIK
1409552..1410016                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07130; phage(gi100045)     4.67e-99            SalmonellaentericasubspentericaMTAVLGIDPGCSGALVLITEQGAYIDHLAMPTIKVGTKSRVNGAAVAAWVRQYGITHAYLEQVGAMPGQGTASMFTFGHAAGVVEGIVQGLGIAYTLVTPQAWKKSAGLIGSEKDAARSRAIQLYPGLRALDAKAKGQAIADALLIARCGVGIK
1410226..1410423                   hypothetical protein; DOE57_07135                                                    N/A                 SalmonellaentericasubspentericaLAAENAHARERHVFIRALAVSILEHSGGRMDWRGAMEDATELLQTVDSVYAKTPATDAFLAEVRAQ
1410576..1410806                   PHAGE_Escher_phiV10_NC_007804: hypothetical protein; DOE57_07140; phage(gi89152463)     8.05e-38            SalmonellaentericasubspentericaMSNIDKPMTNRELVDVAIELAGEFYAMQGYSHRPGFKYWESPHPHERLCFEMACVAFETIRGSDVMDAVSELEDEE
1410803..1411204                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; DOE57_07145; phage(gi966201465)     7.22e-95            SalmonellaentericasubspentericaMSNIKGPLISSQRYLDKAKVNDRAARFKRFIVSVYPIVLRGQQYTILMDGHHNYAAAKLAGIEPDYRPITKKVQRILGEMSWREREAFFINNVTDSNYYFVETGEVVHELVMPDTSCKFQAHAGNQWIFGGAA
1411201..1411593                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; DOE57_07150; phage(gi423262430)     3.22e-65            SalmonellaentericasubspentericaMNIDKQALLGADKHANQHRLSRLIIEANSAELRAIAESVEQYTDQLIAALADSEKRTAELDQRLIEYAGIATREAHRVAELEARKVNLSKLSVGEVMHMSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKE
1411596..1411853                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; DOE57_07155; phage(gi100045)     6.95e-58            SalmonellaentericasubspentericaMATLTKQEKAWVKKLNKLLAECPSNRIAFATTGDCEVSLFDVTRYDEIFDEVEKGKSEFIPSAMRIGATFNECLTFPNQVESTAG
1411864..1412424                   PHAGE_Salmon_ST160_NC_014900: hypothetical protein; DOE57_07160; phage(gi318065907)     4.53e-66            SalmonellaentericasubspentericaMTTITREQQKQILIDTANHVISRDNTSPYSENLRELARIALASMEANPVSQTYELPELIEGMEVSVDVSTCDFDAGHRYFGTVTEVSELDSAKNGYILLVQDAEPNFDVNGNSPVIPDGWISCSERMPEDEQEVIVHNKLGYRYVSYFDEHSGLFFDMRGGNQMNCIEHILVTHWMPLPEPPQEVK
1412501..1412767                   PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; DOE57_07165; phage(gi410491513)     5.74e-36            SalmonellaentericasubspentericaMGGKVPNYQIVYRDETLNYFKPGGYVFFQRLKEYGGGYWLGKIYEDGFEFVLEKPTSLSEGIKHLLVLKSVEDGYLEFVDDIDNFKLQ
1412984..1413361                   hypothetical protein; DOE57_07170                                                    N/A                 SalmonellaentericasubspentericaMSKSKIFVRAWKLARKGANKFGGSAREYFADSLRRVYAANAARSTINNVRYEALRGKPTLNPSDAVELATYHAAEALAMSLLTMHPQEHLEMHQKYSALIPELGALYYDAIISNSYTNGIVIMRR
1413373..1413609                   hypothetical protein; DOE57_07175                                                    N/A                 SalmonellaentericasubspentericaMMAKINEIFGRVNEFGTVDILYVDDGESVTSIEDAPEFIKNIRHIYGVSQPSGSVRYEHDEIIITLNDAMLLGIEIEA
1413611..1414105                   PHAGE_Xantho_OP2_NC_007710: hypothetical protein; DOE57_07180; phage(gi84662714)     1.52e-07            SalmonellaentericasubspentericaMDNEDKIELLEKMGTAIYGSHWKPALASHLGINDRSVRQWASGERAIPDSIIREILSLMHDRANLLARTADMVSREIRKMPECERIIYQTNLKLPEIRRELYTEKRDWFDIDGRLYALNENGSVIDIHGYESDCYGMSVLPDGVTVNDMLIAKNKYIAENGDYD
1414089..1414382                   hypothetical protein; DOE57_07185                                                    N/A                 SalmonellaentericasubspentericaMGIMINQQLTIDLKILASALGCLDRHNLSEIITLGGIACSKSRADAILRGSGAVKNATGNSNIQGSKINRTATVTPDEFHAFCVGLKIWLESLETKE
complement(1414452..1414709)       hypothetical protein; DOE57_07190                                                    N/A                 SalmonellaentericasubspentericaMPTQMLHDWYRIVFLAAGTVEKVGHYTQHCRVVQRIAASSDKKNPREYEDCYFCGAESRPAILRHLLTLFISKQAHRRALVFLAP
1414754..1415350                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07195; phage(gi100001)     2.06e-119           SalmonellaentericasubspentericaMPATPKTHKRKSTQYKPLTAMQEAYCQSYIQTPENQTQAAINAGFSHKTAHVKASIMMRDERIQKRIAELMEERNKRLRVSADYVLLRLVEIDQMDVIDILNDDMSIKPVSEWPKVWRQYLTGFELADMFEGRGDEKELVGILKKIKWPDKVKNLELIGKHVDVNAFKERLEVSGTVTVADRMAKARRRVKERAGGEE
1415347..1416816                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07200; phage(gi100002)     0.0                 SalmonellaentericasubspentericaMTVATMSPEEQLVEDIASFTYDPLGYALYAFPWGEDGTELAHATGPRKWQADAFREIRDHLQNPATRHQPLMLARASGHGIGKSAFISMLINWGMSTCDDCKVVVTANTDNQLRTKTWPEIIKWSNLAITKEWFTCTATAMYSNDPGHDKRWRADAIPWSEHNTEAFAGLHNERKRIIVVFDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKCAQIDSRTVEGTNKQQLQRWVDDYGEDSDFVKVRVRGIFPDASELQFIPTGLTDAAMKRVVTAGQVAHAPVIIGVDPAYSGVDDAVIYLRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVFIDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGEMFNSCKTWLKLGGAIDDQETADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVTKKINDPRQQQGKAITDYDPYA
complement(1416860..1417279)       hypothetical protein; DOE57_07205                                                    N/A                 SalmonellaentericasubspentericaMKTADMLAKYLNEWPLKYSRIVQADDHIFYGVFSGNEMHYEAIPGERLAGLPLSEDHGTSVTSHDWIAAQRSEMEKGNVFDISRAVYAKEKSDDDYMREHLYNMKLHCLHAALIQNGQFDKTNATNIAEAINAGFDAIK
1417821..1418027                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07210; phage(gi100004)     5.54e-32            SalmonellaentericasubspentericaMCMGSSPSVPSAPEVQAAPQEQDAAVVDARDEEIRRRRAAAGRSSTLLTGSQGDTSTANTSGKTLLGQ
1418042..1419712                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07215; phage(gi100005)     0.0                 SalmonellaentericasubspentericaMAETTKERLNKQFSQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDSTGTMAARTLASGMMSGITSPARPWFRLATPDPDMMDYGPVKLWLETVQNRMNDMFNKSNLYQSLPQLYGSLGTYSTGAMAVLDDDEDIIRTMPFPIGSYYLANSPRGSVDTCFRKFSMTVRQLVQEFGLNNVSESVKGMWESGMYEKWVDVMHSVYPNIDRDTAKLDSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKALQLLQKRKSQLIDKATNPPMVGPTSLKNQRVSLLPGDITYIDQMTGQDGLKPAYLVNPSTGDLITDIQDTRQTINSCYFVDLFMMLQNINTRSMPVEAVMEMKEEKLLMLGPVLERLNDECLNPLIDRAFSMMVRKNMLPPPPDVMEGMPLKVEYISVMAQAQKSIGLSSLASTVNFIGQLAQAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQTRQQRAQQQQQQQAMAMAQVAAQGAKTLSETQMKDPSALSAMAQAAGGQQQ
1419709..1420005                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07220; phage(gi100006)     9.09e-67            SalmonellaentericasubspentericaMTDYDDDKLKEENARKQRDLAQREIDDIRFVMDSKQGRRVIWSVLEKGRVFSAIPPMDALAMAFNEGQRNLALELFQRVMAHCPDQYLKMAAEASEQE
1420008..1420718                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07225; phage(gi100007)     4.26e-149           SalmonellaentericasubspentericaMNLFERLLYRRLCNEQSADGGAAPAASEPSTTTGDNPAPAGEPAPKEGDTSQPGAEGEKPAEENPADGEKKEGDKPAEKKEDDKPEGAPEKYEFQAAEGVELDTEALKEFEPVAREMNLTNEQAQKLVDVYPKILAGVQQRQAEAWQQTTEQWAADVKADKEIGGDKLTSNISAAQRALDQFGTPELKEYLNTTGLGNHPDLVKAFVKIGKAMSEDGMVTGGNDGQRSAAEVLYGK
1420733..1421719                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07230; phage(gi100008)     0.0                 SalmonellaentericasubspentericaMAVKGLTALTLADWGKRIDPNGKVDKIIELLAQTNPILQDMPFVEGNLPTGHRTTVRTGLPTATWRLLNYGVKQGKSTTVQVTDSCGMLETYSEVDKSLADLNGNTAEFRLSEDRAFIEAMNQQMAQTLFYGDSSVNPQQFMGLSSRYSSLSAGNAQNIIDAGGTGTDNTSIWLVVWGENTVHGTFPKGQKAGLQHQDLGEQTLIDPDGGKYQGYRTHYKWDNGLTLRDWRYVVRIANIDVSNLDDPATAANIAKLMIRALHRIPNRGMGRPVFYMNRTINEALDLQSLEKSSLAISVKETEGEWWTALRGVPIRETDALLETEARVV
1421771..1422208                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07235; phage(gi100009)     1.39e-96            SalmonellaentericasubspentericaMILDKLLMFSEAQAVTASAASTDVIDLGPIDGTRRDIGVGYPLEFWAMVNTTATAADAATVNVQLQTSPDNSTWTTIYDSGALALAALTAGKRVASAKVPSGVLRYLRVNYSVGTGPLTAGAFTSGINLDVDANTPYPIRSKVTG
1422219..1422554                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07240; phage(gi100010)     2.37e-61            SalmonellaentericasubspentericaMSGEKPKYRVLRLSHIHNNLWPEGSEIEYDGEPGSALEPINDAAKAAKAKATGKAAGAVTSAKHINDAAEDGDLDKIREEYEMLFNEKPHHNAKAETLREKIADKRKELGV
1422606..1422929                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07245; phage(gi100011)     1.47e-55            SalmonellaentericasubspentericaMELVNLKTGTDSYQDESGETKTRDEYPWGLCITLNNETLNKLKAQPQGVGTEVMITAKAVIRGLSARETDDGVNRSADLQITDMAIAPASGEPEKSAAETLYGNGGE
1422929..1423534                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07250; phage(gi100012)     3.29e-146           SalmonellaentericasubspentericaMASVVEICNRALSNIGNSRSINSLNEASKEAGECSLHFDACRDSVLSDFDWNFATKRVALADTNNPPPDWAYAYQYPSDCLRITEIMLPGVRNPTAAMRVQYEVGADADGTGKLIYTDQSQAWLKYVTRITDVNMFDAIFMEALAWRLAAAINMALTGNADLGNFALNMYNRVILSAGSHSQNESQEPQPPVDEFTVARLS
1423534..1426005                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07255; phage(gi100013)     0.0                 SalmonellaentericasubspentericaMAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYANRKCRLIPFQFSTVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYAEADLFRIKFTQSADVLTLVHPSYPPKELRRYAHDNWQLVDVETKNGPFEDINVDESVTVYASASTGTITLTASSSIFGAEQVGKLFYLEQPAVDSVPVWETSKDTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGDGDTGIQWEYLHSGFGIVRITAASGTTATGQVISYIPSQVVGSGNASYKWARYAWNSVNGYPGTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGDQNKVLTPAAFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKRSIIDWSFCIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSSGKYESTCSISEGNEDAVYFIVNRTVNGQVVRYIERLSSRMFTSDEDAFFVDSGLSYDGRNTSSRTMSITGGSDDWDYRIDYTINVTGGAYFTSNDVGAQIQFPYTGIDPDTGASVAMELRCDILSVASSTSVVVRANRNVPPPLRNVATTNWQLARQTFGGLSHLEGQTVNILSDGSVEPQKVVSEGSVTLESPGAVVHIGLPITAEFETLDININGQETLLDKKQVIPAVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWDKNGRVKIRQLDPLPLSVLAVIPRLTVGGF
1426005..1426469                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07260; phage(gi100014)     2.19e-109           SalmonellaentericasubspentericaMIDVQLLPATEEHLQMILPNVRQADIDELYAVSLMTTEAALRVGLRTATMAWSGFANGELVTMFGVSPASMIGGNGIPWLVSTHLVEKYQKTFLRRSRHALQDMLTVYPRLENYVDERNHVAKAWLHWLGFRLEDSAPYGALGLNFHRFHMERK
1426469..1427005                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07265; phage(gi100015)     2.07e-44            SalmonellaentericasubspentericaMCSPIALAGASVALSGVSAYNQYQQGKYSSAVAERNAEMATAQAQDSINRGNAQADEVRRRNRQAAGTQAATMGATGADLSTGGALDIFGDTAQFGALDALTTVNNAQREAYGYEVQAANYKAQASASRKQGNMGAFTTLLTAPLQAYGAYQMGGGTWSPFTQKAAPISAAVGTPTGR
1427018..1429639                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07270; phage(gi100016)     1.78e-78            SalmonellaentericasubspentericaMPVVPTTSGRQVQSRGVSTQGFTAFKTPNMGEVIGGVAEQYAGVLAQAKQRANVAMAQDASLSLSQISSDLLNNPETGLLNLKGKNAIGKGEEYTQQFDSQVEQLAMTLPDDQSRNAFMQQAQQQRIQFTTQAGRHEIGQVRQYEADMQDATLKNLSMQFRNPAMANQAGLKAYHSIIAYGEAHGQSQEEIEQNWVSWRENAENGAAEAWYVPMYQQMMGPNGKIEVTDTPSEAQLFSAIIWQESGGNQYGKDGTPLVSPKGAVGVAQVTEDTGPEAARLAGVPWDRDKWLNDPRYNARLGQAYFGAQMKKYDNNPVLAVAAYNAGPGKVDGWIKQIGDPRTGEVSNAQFAAAIPYDETRNYVAKVTGSAGAIPGSATMENLIAQPFWNAMSPDKKSQMMSKVAGMYDMQASAGRVALQSRMQDDLSKIEAGKQVTPISAHEWAAVMPLQAAPAERLQMEKTFQQYQQAMTLQPVYQTIMQGNVQQGTAAVQAMAPQENDPDFKYKAELYASAKVKLGQVLKAREADPGAWLQQNSPVVQAAFQQYLNDPSSGEYLVSRIQSEKDRLGIMSKKVLPESMVNDVLQRIDNTQESSVKAIQSVAQSFGKYSDQVMQQVQNKAFPALKVVMSTENQRAADALWQIRNVPTSDLRSGLDKNQADSADSSWTDQFKDFSSTLIPQRNGAENWTIYNEQGKRLTYNYMQRGMSASDAAKQAYQDLLGEQYQTNGTWRLPNRTGVDIRDVNDGANAYLKNLSADQIMPLIGDPRLPDEVNREQSISRIRDNAQWVTNSDETGLTLMLNGLIVNGADGNPITVPFNDLAKLGTTNRSVWNSITKFIDTPVKYTPGQSKEYSAESQRDNLINIFQNGQQSGR
1429641..1431338                   PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Hypothetical protein; DOE57_07275; phage(gi589286887)     8.29e-58            SalmonellaentericasubspentericaMPIYTDDPGQGINQPIGNAPAGLGESLLSSLKQGFEEGPIMSGYRFAQVDSLANDPNSTVISKQDADEFLKQYGVKSINVPDSGVTQAFLDHVIAERKDSLARQQIAMSAPSGWVATPLNFAASLAGSMADPGNVALALVPFAGEAKAASVLGRFGERFVAGARMGAAQAVVTVPLTGLAAAAEGDDFTYSNALESTFFNTMAGGLMHAGGGLIADIVRPRRVPDAATGESPAFSGDAQPTPVITPDNIPAGVNIPEVGANADLAAAISSEAESYAYSRAYDDVVPDYMARQQELQSGQIGNVADLRAELAANQRHADSLDATLQQRTKKYQGQRMKFKDARSRALKEIQAEKDAIAARNQEINTSLEQNATAEQARWRQSQISRGEIPDDLKVTISERAQQILDGMQMSPVAGAVRTAASAIRDADWSVNQQAYRAALAHMMEGRSPDVEPFYELHKPALRERAIHRIQNPARQVDETARPASETADRVYQETQKADHEITAAAADLDNELNLSNALLDDIAVDNPDLVTTLRQKLNDIRSDASDNSMSNAFRAFAACMINRGM
1431338..1433887                   PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Hypothetical protein; DOE57_07280; phage(gi589286888)     0.0                 SalmonellaentericasubspentericaMAANEFLTQCERSVNAAAGRELSSDEMESLVRDMNDTTRRILATNEALSLEEAAMRAAEELSNADMLAKQIEARNKAINTRIAAQRLRELRTIWKDRPDIGLEAILVGRNDARTGARRSVSSEVAQLRGKYHSGINYDFDRAGLVKFIASGSNDREIADAMWRIGRGQSTDGMTKQSVSAAQIIMKWQETARIDENRAGAWIRKEPGYIVRQSHDIMKIRAAGYEAWRNAILPRLDERTFDGVADREQFMRNIYNGLASGVHLTSENPDWMNGFKGSANAAKRASQERILHFKDGISWHEYNQQFGTGSLREALFGGLNSAARTTGMMRVLGTNPQNMFKYLTDTIAEDISKSGSPAALADYMTKVSRINRTVMPQVDGSLNIPGSVGWANASAAVRGWLRMSQLGGAVISSFNDVPIAATEMRYQGQNFMQALLGAMRGRFTRYNSAEKKEILSAIGVYSDSMTQEIIRRISGDDTLNGKLGRAQQLFFKYNLMNFWTESGRNSNAMMITNWLAKNADQSHARLPEDLRRVLDLHGIGEREWEIFRNMDMADSEGRKFMTTSGIRGVPDEVIAGYVESKGIKPTQRAIADARDQLEGQLRGYILDRLNIAMSEPGDRTQAFMKMGTVPGTVAGEAIRFAGQYKSFTASFMQNVLGREVFGRGYIPAGLGESKTGSLTNALLRNGKGAFLGAANLFVWATMFGYISMQSKLMLKGQTPRPADAKTFLAAASQGGGLGILGDFMFGEVNRMGAGPVTSLMGPAASNADSIITLLQQTTRGDADLGDWYRTALDNTPFLNVFWLRTAMNGLILNRIQDALDPGSLERYQRRVEREQGNDFLIPPSQFMLGK
1433889..1434260                   hypothetical protein; DOE57_07285                                                    N/A                 SalmonellaentericasubspentericaMNRIILMILLMFLVGKASADTTSSLMIQPKNGETLEDSKKHTMEYFGCIKGQAVKYAKTGESVDSISKASVVSCESYIPMIAESNIYYLNSSQDGKRQFTERLKSDGERLATKFAMDEKLKKN
complement(1434291..1434698)       hypothetical protein; DOE57_07290                                                    N/A                 SalmonellaentericasubspentericaMTQQYAPYRKGTVLAPVGGSDHLHIICNDPVHYPIHGCDCILVVNISSVYPPPAYCDPACILHAGEHPFVFHESYVFYEDAIVWKVPNVISREQSGELTPHADMEEVILQRVLDGFETSDFTNPKILKFYRAYCV
complement(1434695..1435270)       PHAGE_Shigel_Stx_NC_029120: hypothetical protein; DOE57_07295; phage(gi985761316)     1.44e-06            SalmonellaentericasubspentericaMSMYSESKTAQMAGYLLLKRGGRMAYIKLMKLLYLADREYMITYGDSMTGDRAVSMNNGPVLSRTYDLLKSGSPEEESPWDDWIAGEANFEVSLKKRVNGLDDDDAFDELNKANKRILDKIFDEYGQYKRFELCDLTHRVCAEWQNPHGSSVPISPKDILMAGGKSESEADELIRHMRERDALKQFSRQLA
complement(1435406..1436104)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07300; phage(gi100020)     4.81e-124           SalmonellaentericasubspentericaMTIQKPTSIFSFESLCTIRMFMIDGEPWFVTKDVCDALNIDVTQARKLDKRGWNKKGLYSIQTPGGKQELSVVSESGLYIIMLRCKEAMTEGTRAFRFLEWVTGEVLPQIRRTGSYIKNTLPQEDRIKIVADQVATATASAVMQAMQIEQKNYSAPLKPGYRDLIHSPEGVVGLAERSLLMNLLNQMQDDGHDVSGAAAEFTTMISYIVGASKCLRDIQTHAQYINSQAGGF
complement(1436420..1436680)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07305; phage(gi100021)     1.21e-30            SalmonellaentericasubspentericaMQRQYHHPLEDGFYERVHTPGGVISLVENSNLMTLLRELDKDGFNVDGPLAELTALVNYVTSSQLSMKDLQTHLDYCAEQLRRQTT
1436864..1437532                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07310; phage(gi100022)     2.01e-113           SalmonellaentericasubspentericaMTVSTEVDHNEYTGNGVTTTFPYTFRIFHKSDLVVQVVDLNENITILALDTDYTVTGAGGYAGGNVILTVALANGYQISISRELPVTQETDLRNQGKFFAEVHEDAFDKLTMLIQQVRSWFSLALRRPSFVANYYDALNNYIRNLRDPVQQQDAATKNYVDAVSNTNLRRTLRVPEADVNLVPNVDFRKNKVFTWDNDGQPSAALPPSGSATDVLIELAKPTG
1439597..1439683                   Crp/Fnr family transcriptional regulator; DOE57_07315                                N/A                 SalmonellaentericasubspentericaQERTLFRVSRSNMLNVLSALKQGRYITFK
1439792..1440196                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07320; phage(gi100024)     2.72e-78            SalmonellaentericasubspentericaMSAVITNESLNQWLSVWSLVAVIAGVPPEVALGALAGAVIFVTSAVEYPIRRRVLLSMLSFLCGLLFYKPTATLLIGFASSFPGITTDMFEKGVAYSAGAFVSAIVAVRVGIWLYHRSDNPRELITGRKDDDNS
1440183..1440491                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07325; phage(gi100025)     2.04e-68            SalmonellaentericasubspentericaMTTHELLLLIANAVICSGIAIRVGTFRRNGSQHRRWGGWIAYFLIVASASIPIRAAYAIWYHTPMAADLSEVIINAVMLAAVLKTRGNVVQIFKISRSQHGH
1440481..1441095                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07330; phage(gi100026)     2.43e-87            SalmonellaentericasubspentericaMDINQFRRAAGITEKLAARWYPHITAGMNEFGISKPDDRAMFIAQTGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLELVANPGQLELERHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIDDRRVRYITASKVLS
1441092..1441316                   hypothetical protein; DOE57_07335                                                    N/A                 SalmonellaentericasubspentericaMKRLISLLIPRWETDTVSLQETERGMEIVCSYADIEPGEWFDCMCELKTFTWLNWSWPYGEPINVRRFQPKVSL
1441313..1441813                   PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; DOE57_07340; phage(gi100027)     1.27e-89            SalmonellaentericasubspentericaMICAFVKAYWKQLHILVMLAALVIGGVVAWNVHGDRQYEAGYAQAKADQKQADDKARSQRDQEKTQIERDAISRIEAARADADFAAASSSRLQSELDKIKRFAEHYTGTFPTGTPASKVIGMLADMLEESNRAYVATAEEAERYRSAGLTCERQYDALKKRVTVNR
1441947..1441965                   attR                                                                                 N/A                 AATTTAACCCTCTGTTTTT
complement(1442253..1443137)       PHAGE_Burkho_phi1026b_NC_005284: gp58; DOE57_07345; phage(gi38707948)                2.20e-10            SalmonellaentericasubspentericaMQINLFESLRIFIEIVESGSFTQAAENLGIHRPAVTKALQLLEQHSGTRLMQRTTRRINLTPDGEEFYRRSKPLLAQADELLESFSSDQVLHGQLRVDMPIALAALLVIPRLPDFYSKYPGIEIILSSSDRRRDMLRDGLDCILRMGELEDGDYIAHRMGSIEMTTCASRGYIALHGKPETLEDLRDHLAINWVNSSSRQIMPWTFATPEGTVEITLPGKLVVDNSEAYVSAGLAGLGLLQGMNVFLKPYLDSGQLVEVLPHNPSPDRKLSLLYPHRHLSRKVCIFTEWLESLL
1443348..1444328                   nitronate monooxygenase; DOE57_07350                                                 N/A                 SalmonellaentericasubspentericaMKDNRVCQILDIEKPVIQGPLSWLTDARLVAAVSNAGGLGVLGPNAGLTAETAVSTPEETAEKMRAEIRKTKKLTEKPFGVNLIPTPENDIWTQPILQVVKEEGVRAVVYTGYGEGAVIPALFDELKAAGIAVIYRDINPTPENTRLAEEAGADIVVATGFDEGGTLPGTALGTFSIVPLIADSVMNIPVMAAGGITDSRTAKAAHALGAEGVFAGSVFIGTEESRVPKSVKDKIIDANGLDLLLFRTLPHYYRSLPGKLAATLVSMDKAGASHEELGKTMGGLRGLRIGMLEGNTDKGYISLGTGIGNIRSVKSVAEVVDELTVG
1444325..1444567                   hypothetical protein; DOE57_07355                                                    N/A                 SalmonellaentericasubspentericaMNAVPTVKQRQAVRGLPELPFSLYVTSAPGTKPTTPKKFQSLMGSLQKNSDVWDWLPYFPPMMVIFLISHRLWRIGRNRM
1444480..1444809                   hypothetical protein; DOE57_07360                                                    N/A                 SalmonellaentericasubspentericaMGLVTLFSSHDGYLPDFAQTLANRAEPDVTFEYTLTVKHCIDTITGFLRRVDIEPRPAIADILTQFESTVGQFPLGCQICLELLKIGCARYREFTTLKATGFCIRSRES
complement(1445071..1445610)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DOE57_07365; phage(gi100023)      1.38e-50            SalmonellaentericasubspentericaMKKVILGAVLFPLSGSVLSSSLQDQLAAVAQAEQQGKNEENRQRDALQAKRNQEAQQERQRQANAAALAQQRAKAAEAERKTRRAKLEAEAAQDKERDQSYEDELRRLEIQKQKLALAREEARVKRENEFIDQELKSQAAQTDVIQSHADANRNLSEGGRDLLQSEGKAREEKASGWFN
complement(1445626..1446017)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DOE57_07370; phage(gi100022)      2.58e-05            SalmonellaentericasubspentericaQEIKTVNILSVLPAKVAVDNTANKKLLRPSAQFLVLRAALLVITWAQVAIVLLPARLAAEPLVQRRFHGLKIKRLKPYLLLTKKERFIPPPKLEKRANLQLVWLLYRPKITKREFNQIRNVLRKAAA

#### region 3 ####
complement(1716794..1717024)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; DOE57_08700; phage(gi428782403)     3.16e-10            SalmonellaentericasubspentericaMGRYQCHLLCRWFFTPTIKELAGAEIILHELTGHLSCAEVKVKSMQANNLNRVSTKTVKERLHPMLEEMFEVAGK
complement(1717062..1717499)       PROPHAGE_Salmon_Ty2: transposase; DOE57_08705; phage(gi29143766)                     5.94e-27            SalmonellaentericasubspentericaMSKFQKASHVLWCCQYHIVWTPKYRFRILRNNVGKEVYKQIRISSEQPGIEVVELNVQIDHVHLLVKVPPHLSISHVIGHLKGKTALRLFSKFPYLRKNKLWGNHFWARGYCVDTVGINEEMIRKYVKYQEKHEVEDSQLPLKEV
1717498..1717677                   hypothetical protein; DOE57_08710                                                    N/A                 SalmonellaentericasubspentericaMVKSLSVMGITDSDFPMSSIIGRANLLLTTSIGGGVHVGIKNNHNLLVFKGNFGRHERI
1717660..1717697                   attL                                                                                 N/A                 CGGCACGAGAGGATTTGAACCTCCGACCCCCGACACCC
complement(1717857..1718609)       PHAGE_Entero_HK022_NC_002166: integrase; DOE57_08715; phage(gi9634144)               9.81e-10            SalmonellaentericasubspentericaASANVQNRKVSFLKKLFSYAVDESLMFDNPATRKKMRRTKDKKRQRLSLDHFMAIRRAAEPWLRTAMDLALQTTHARLEVSRIKYSIREPKNGGCVWFEQPENGIYGTLYIHRQKVQKKEASHVAIPIGDELQRIIDNSRDNVASPYVVHRIPERQVKRSKEVSHPTLVAPDYLSRSFSAVRDQLGLCNHLTMDERPTFHEIRALAAHLFDKQGIDPQGRMAHSDAKSTKIYTQNHIDWVVVPHGEIKAG
1718651..1718911                   PROPHAGE_Salmon_Ty2: variable tail fiber protein; DOE57_08720; phage(gi29143754)     7.22e-31            SalmonellaentericasubspentericaRAPLDSPELTGIPLTPTPPLIVNNKQIVNAEFVHAAVAALVGASPEALDTLAELAEALGNDPNFATTMLNALAGKQPLNETLTNLSG
1719197..1719388                   PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; DOE57_08725; phage(gi209427794)     1.06e-16            SalmonellaentericasubspentericaMFVWGDKSVELRLGPAEILVSDDNGVIPEQGGRVLTQVIILDAPKGQIECIYRPLQMRQDGGE
1719529..1720164                   PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; DOE57_08730; phage(gi209427796)     3.43e-21            SalmonellaentericasubspentericaMPPVFITLPVNEHGNVLPISSHDLGSIRGAAQNADDGVNVQMGNSSYRIRYLPRLDFFSVNPNTGFNPLHSAMEFIATMNNSTHLEEHLNQGRAFLSVLEAAQSLRPSRIATRIDSCSFSMERENLSLAAEHLTCPITLCVPERGVFARTSLQSDVCCLYDSTALKELVFRRLPHPISREAITGAHIVPKEQCHFDQEKLIFVHTILNSIG
complement(1720371..1721420)       type III effector; DOE57_08735                                                       N/A                 SalmonellaentericasubspentericaMLNVTSFFSSCFNVLQENRELSRETTISPSISRRVTHMENPPLLRTPPVWLVTAKIPLPLLNGRHTRSHSFVMVGDPGKGSNSGAQYYAINSDDKRSRVIIDDSFIQKTNNNHRYHNFSNNIRAAVESLLGRNFSCIEGFHKTYTNIRQKQEPNISPNKLMEEVKALTFLIPSEHKEMWIYENNGKESTKPNLGERDVRMFENVDLSEIDKVNVKSKSELYSHMLSGEPIKTSKLTLRYLPNTDPIALIEAKRDLLLQRLYMDELYERNGTLLPCSEPNKGFVPPDILSQIQNKTPTYKMLPPFTPLQGNCSTGAATILRKAGTKEEDILACSPRNYGLHHPMYFWKPIL
complement(1721772..1721957)       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: transposase; DOE57_08740; phage(gi971749639)     3.34e-25            SalmonellaentericasubspentericaQVTFCKKLYGDLDTLQSDLDEWLVHYNNERTHQRKVCCGRTSMETLLDGKRIWAEKNLNQM
1722440..1722631                   PHAGE_Escher_PA2_NC_028449: hypothetical protein; DOE57_08745; phage(gi953358052)     1.18e-05            SalmonellaentericasubspentericaMVNQARKQCGEKEVRNNDFIYLRINPRPIGWGYKGHLLSCFKFFVSQSFVTKALRDLLVLCMC
complement(1722600..1723433)       hypothetical protein; DOE57_08750                                                    N/A                 SalmonellaentericasubspentericaMAGHPRGQITWQLTYQLNSPNSQRNYRVAGAALLPGGVSVSANNRPTVSEGKIAPPLPPKPTTVAMPEFANQKQAVSEGKIAPPVPPKPTAVAMPKFGKAAEILSVGLKSKIIKDLNLDNWMGLGGEITPLVMIDFYKKQNIDLIIHAHIKKEAIKTDPIKNNSINLMNVGDHYMVLTVNKRGSIELIDVPGDGDCLFRAAVKGQQIAKTPTVNYSYQQTGNHNDEHIILKESIKTHFQNNFDTFIDDMKMILTTEKSKLANNILHDINTYIKLINL
1723910..1724101                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; DOE57_08755; phage(gi399528790)     6.72e-32            SalmonellaentericasubspentericaLFDDNAPRAGSVKLMEVLDHLNAKDGKGTLYFAGQGIPQQWAMKREMLSPRYTTRFSDLPIVR
complement(1724094..1724765)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; DOE57_08760; phage(gi56692976)     9.52e-53            SalmonellaentericasubspentericaMCGRFAQAQTREEYLVYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDAQLHLDPVFWGYAPGWWDKAPLINARVETAASSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIHRKDGKPIFMTAIGSTPFERSDEAEGFLIVTSAADKGLVDIHDRRPLVLSPDAAREWMRQGISGKEVEEIITDGVVPTDKFTWHAVKCAVGNVKNQGEELIKPVI
1725042..1725079                   attR                                                                                 N/A                 CGGCACGAGAGGATTTGAACCTCCGACCCCCGACACCC

#### region 4 ####
2122957..2122968                   attL                                                                                 N/A                 GGTTTTTTTTAT
2128637..2130688                   PROPHAGE_Escher_MG1655: protease II; DOE57_10760; phage(gi16129798)                  0.0                 SalmonellaentericasubspentericaMLPKANRIPCAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMTSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWDVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQNYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDERLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2130724..2131422)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; DOE57_10765; phage(gi985760125)     7.57e-19            SalmonellaentericasubspentericaMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRGNGTPQ
complement(2131446..2132102)       carbon-nitrogen hydrolase family protein; DOE57_10770                                N/A                 SalmonellaentericasubspentericaMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAANTHHMTIIVGMPVEHNCRFVKGIAIFAPWVTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADSGSLLLTGLRTTEGWQGDIIPLR
complement(2132210..2132440)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; DOE57_10775; phage(gi422936677)     7.82e-23            SalmonellaentericasubspentericaMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASISLSRLPYEPKVK
2132578..2132952                   CopC domain-containing protein YobA; DOE57_10780                                     N/A                 SalmonellaentericasubspentericaMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQESIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2132953..2133828                   hypothetical protein; DOE57_10785                                                    N/A                 SalmonellaentericasubspentericaMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAALMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVPGTFQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQQAISAMMRFSRYGHFFVAGVLLTGISNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRADIWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2133846..2134196                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; DOE57_10790; phage(gi971764937)     1.89e-10            SalmonellaentericasubspentericaMKKILLPALLLATSGVALATPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYAINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDTSK
2134245..2134256                   attR                                                                                 N/A                 GGTTTTTTTTAT
2134259..2134378                   hypothetical protein; DOE57_10795                                                    N/A                 SalmonellaentericasubspentericaMMTDKTSGFFNRLRHKLENLASSSILKGQGDLACINANF
2134467..2134646                   hypothetical protein; DOE57_10800                                                    N/A                 SalmonellaentericasubspentericaMQSVIRNFPKFFRISVFRSFWLYHNQIKFNIYFTTKIGVLEHHISFIITLIEIEFRGVR
complement(2134584..2134967)       PHAGE_Entero_HK022_NC_002166: integrase; DOE57_10805; phage(gi9634144)               4.13e-21            SalmonellaentericasubspentericaMPWIGLRLIYSPLPTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
2135025..2135105                   PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; DOE57_10810; phage(gi966201576)     9.93e-06            SalmonellaentericasubspentericaAKEQYRVLVIRVDTSNTDWPEKPASQ

#### region 5 ####
2810021..2810033                   attL                                                                                 N/A                 TTTTGGAGAAGAG
2810622..2811212                   PHAGE_Shigel_SfII_NC_021857: transposase; DOE57_14280; phage(gi526244660)            3.64e-67            SalmonellaentericasubspentericaMPAQACQNFFRDTLAPFHKYRQNALLDATLALINGASPTLTSIGRYLPGAAQVKNKIKRVDRLLGNESLHCDIPLIFKGIINMLTQKLSLCVIAVDWSGYPSQEYHVLRASLLCDGRSLPLLSWIVPSEKQQSSQIQKAFLDALAGPVNSKARVISYLTLGENILRHSPLILRRTVLSTVLNHFARTYRSMVLVY
complement(2811538..2812749)       hypothetical protein; DOE57_14285                                                    N/A                 SalmonellaentericasubspentericaMIFSNESEMQKWLESELEKHRGLLSVIDNENEIRNFDAKSIAEKKIQDSFTLCMDNLESLHVISADKNISVDKKDKLRPDVVAYSIDRNSLVIMELKNIKGPTRQAGTELSAYAAELKGYLSHLSDGDIINVIVSYEWPVLLNHYVFNTIFWQHKNLICLEPIEDSSGCKKLRCRDIKTIIQSDINERFAFQHLEGFHISLHDRTLGNRPCRESGLHEKVDVIKASMAMMAAESEKDHSHGFAMLCKKNDITDAPYVITIANVSGFASIERHFHDEGFETIADLPIIGRHIHEINEGFCNKGFSASTLKAYSRAKGVLKKICSPRIECPDSWLNLQAFTNFPHVDKVHIELWGVFKEKYFEMISDAAEDSDCLNLSDVDLIQCVIDGLMYESYEHIRVGRDYE
2813025..2813299                   hypothetical protein; DOE57_14290                                                    N/A                 SalmonellaentericasubspentericaMAAIGSTPFERGDTAEGFLIVLPPQPIKIWTFTTIALSFCHLTPRENGCARAAGRRRRLLTVPCRQINLPATPRRVPLGMKLRGRTAA
complement(2813314..2813523)       PHAGE_Escher_HK639_NC_016158: UmuD; DOE57_14295; phage(gi356870628)                  6.43e-28            SalmonellaentericasubspentericaMLLCEIDGEFRIKRYRTHPQPYLINLENGRIEALPVDDDGCSSAPAIFGVITYIINDARNAEFDDCPVM
2813682..2814566                   PHAGE_Entero_cdtI_NC_009514: hypothetical protein; DOE57_14300; phage(gi148609405)     3.54e-99            SalmonellaentericasubspentericaMESSRHSIFNLGNSWDFLRRDLTSPDAHTLSSIRSAVSNSTEGAQVAVGNRIYRVVELNNHFHVSRESSDNCLMNFLYRLGWPKGEVTRKIELIMNAPRLEITPVKNKTILDKTNSHDEMPPIPQVDYNVTLHKGEIVGKGGNAIVYADKDDDTKVLKMFTIPQLHEEVVHEVECFNTYYGKGSAEIIYNNNDISGIKMTRIQGEAVIYAKNLPPHAEQAIYDMFDRLERNNILFVDTTETNVLYDRDTNRFNPIDISSYNQKHTDSKDRQDSIIASYIDGKNYLINTVLNKIE
complement(2814781..2815440)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; DOE57_14305; phage(gi209427796)     2.03e-42            SalmonellaentericasubspentericaMPGINLTPYINPRGELGAIPQNTLERIRSQGTGGSVQVQLGGSVVTMRFAFAGHFLGSIPTGLSGEGLRSALSNIHALERQLNSSGMSHRELLDSMPSTVPPRPPVAASRYPAAHTQSLLSRIDACSFSVGSANLTLPQERLICPITLCVPDNGVFVRTSLQSEVCCLYDSTALKELVSRRLPHPISREAITGAHIVPQEQCHFDQERGAFIHSASELR
complement(2815552..2815790)       hypothetical protein; DOE57_14310                                                    N/A                 SalmonellaentericasubspentericaMILFKKIKHYLSGGDKSIELRLGPTEILVFDDNGVISEREAGFHRFWMHQRDLSVFTVRCRGRMAGNGKTSKGCGA
2815915..2816553                   PHAGE_Pectob_ZF40_NC_019522: putative integrase; DOE57_14315; phage(gi422936668)     1.35e-05            SalmonellaentericasubspentericaNIGTNEEETIAIASEANSVWLDSVRDRYQSVTGSPAVKERLLPYQRGLIDTGKFKAKDWKAEINIPINKKPSQLPYFGNGLVRLFRQMFVILRRCLRSIFQRVSREWRKCILYLTFLKRHSISGRFHRAITLPCNKTATAPYHAPASKSGGVAANFQYRRRKPPLAERLYEAQGINTQKLLGHKSPNQTARYHHDRGKGWTIIAV
2816640..2816744                   MFS transporter; DOE57_14320                                                         N/A                 SalmonellaentericasubspentericaASVRLSYQPRPDRRIRSDICIKLRYLRPVNGLPG
complement(2816711..2817169)       PROPHAGE_Salmon_Ty2: transposase; DOE57_14325; phage(gi29143766)                     6.90e-107           SalmonellaentericasubspentericaMGDEKSLAHTRWNCKYHIVFAPKYRRQTFYGEKRRAVGSILRKLCEWKNVRILEAEYCTDHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(2817126..2817344)       hypothetical protein; DOE57_14330                                                    N/A                 SalmonellaentericasubspentericaMNGGLTSPFLLSIENPQLGWGFRKAFSFAPVIKTPFDLLKHLAVWQLQKSNKKSKGGPNGGRKELSAHPMEL
complement(2817365..2817532)       isocitrate dehydrogenase; DOE57_14335                                                N/A                 SalmonellaentericasubspentericaMLLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSAFGDAIIANM
2817672..2818025                   hypothetical protein; DOE57_14340                                                    N/A                 SalmonellaentericasubspentericaMEISLKTSVLIQKLMEIDKTVPFDADVVTGEELWPIPISRVYHNPPHTFVEFETGEQSQDDPDELTIYSELEIRVHQMIQIRDFVQSNKNLQPEEIISELNVQIERLRAMAEAILKQ
complement(2818249..2818383)       PHAGE_Shigel_SfII_NC_021857: transposase; DOE57_14345; phage(gi526244660)            7.05e-09            SalmonellaentericasubspentericaRRVISYLTLAENILRHSPLILRRTVLSTVLNHFARTYRSMVLVY
complement(2818416..2818886)       hypothetical protein; DOE57_14350                                                    N/A                 SalmonellaentericasubspentericaMKVSQLKIISHNDILPALSGRVFHVTPENNMSLIKQSGALVPNSALLQISKFGNSSNGFFRRRNCVSFFDYRCYGTKHWEEHAYKCFPTQFIKRVPNDRISILFLHESKFDKLIPWTTWKEEEAWSDRVVPYVETGYKGIVSLSEITEELIVGFDC
2818957..2819038                   tRNA                                                                                 N/A                 TGGCACATAGCTGCCATTCAGATGGTTGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCA
2818994..2819242                   hypothetical protein; DOE57_14360                                                    N/A                 SalmonellaentericasubspentericaMGCRGSEVQILSCRPKFPLKTSLLWLVFYGSISYGEAMGNWGIKPSRFDAICDPIGLLTAQFRNSSIHKFFISNYCINSL
2819311..2819934                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; DOE57_14365; phage(gi56692976)     3.71e-40            SalmonellaentericasubspentericaMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDAQLHLDPVFWGYAPGWWDKAPLINARVETAASSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIHRKDGKPILMTAIGSTPFERGDTAEGFLIVTSTADKGLVDIHDRRPLVLSPDAAREWMRQGISGKEVEEIITDGAVPQIIVLVINYNNT
complement(2819959..2820141)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; DOE57_14370; phage(gi399528790)     1.19e-21            SalmonellaentericasubspentericaGDFFSLGVAQLNLFDDNAPRAGSKKLIEVLDHLNAKEGRGVLYFAGEDTTHPDWPETPII
complement(2820241..2822283)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; DOE57_14375; phage(gi169257322)     1.87e-31            SalmonellaentericasubspentericaMFNIRNTQPSVSMQAIAGAAAPEASPEEIVWEKIQFFFPQENYEEAQQCLAELCHPARGMLPDHISSQFERLKALTFPAWEENIQCNRDGINQFCILDADSKEILSISLDDAGNYTVNCQGYSEAHDFIMDTEQGEECTEFAEGASGTSLRPATTASQTAAEYDAVWSKWERDAPAGESPGRAAVVQEMRDCLNNGNPVLNVGASGLTTLPDRLPPHITTLVIPDNNLTSLPELPEGLRELEVSGNLQLTSLPSLPQGLQKLWTYNNWLASLPTLPPALRELRVSGNNLTSLPALPSGLQTLWAYNNRLTSLPEMSPGLQELDVSHNQLTRLPQSLTGLSSAARVYLDGNPLSVRTLQALRDIIGHSGIRIHFDMAGPSVPREARALHLAVADWLTSAREGEAAQADRWQAFGLEDNAAAFSLVLDRLRETENFKKDAGFKAQISSWLTQLAEDAALRAKTFAMATEATSTCEDRVTHALHQMNNVQLVHNAEKGEYDNNLQGLVSTGREMFRLATLEQIAREKAGTLALVDDVEVYLAFQNKLKESLELTSVTSEMRFFDVSGVTVSDLQAAELQVKTAENSGFSKWILQWGPLHSVLERKVPERFNALREKQISDYEDTYRKLYDEVLKSSGLVDDTDAERTIGVSAMDSAKKEFLDGLRALVDEVLGSYLTARWRLN
complement(2822454..2822858)       PHAGE_Spirop_1_C74_NC_003793: putative transposase; DOE57_14380; phage(gi20514680)     2.59e-05            SalmonellaentericasubspentericaLNDRVLPFYESQGLPMLRILTDRGTEYCGKVEHHDYQLYLEINDIEHTKTKAMSPTNGICERFHKTILNEFYQVTFRKKLYGDFDTLQSDLDEWLVHYNNERTHQGKMCCGRTPMETLLDGKRIWSEKNLSQM
complement(2822860..2825286)       PHAGE_Microc_MaMV_DC_NC_029002: hypothetical protein; DOE57_14385; phage(gi971764756)     3.28e-09            SalmonellaentericasubspentericaMKDKREMDVNPVRPVTASRNTEETTVPAAASVRAAIEAWQNETAPGEERTMVAARLLGCLENEECLIHIRAPVTTLPALFPPSLTVLALDGCSALRDISHLPVGLKRLSVVGCTSLEAISTPLPEGISGIFICHCPALTRIEGELPPQLHRMVYVNGCTALNEAQREFLSFPVDKHGRSSLSTAELLADIRHFSANRHEYESEAERNFSQCGFICGDLHGLNLSKVNMSHSDFRRANLTEVTLTHAAVKESDFTSATLTDAVLDFSNLDQSNFAGATLTGVSLYETSIDGVNFTDANLERAQMGGASFDESYPVVTGARFKNAVLCPGMSLKGAVLGTADNSPPPNTGLIRLADAWLPVPEEWDREALELFLDKANRPELFLLNTIDSMGDQYAGEKVRTAERLVRTLQFSGVDVSCVGLYLMETLGKPDYHTSPLIQEWLVPLSDAFYSSNIDVVNSPGYRFGSTGLTYLMAEYFVRHPEKMQSHNGAFIKTMLQGMYDQEVSFPDLSLICQEIYTDCYLTTDAVALYTRQDDFGKMDGSGEPDWESKDAFNWVLLSSPEENSVMMVSDNSLSKMLEPDFYTHWRSFFLYRDGELQEASGYQLDHLFNDVFPVFSKAYQSFCSAHEFGRILDILLPEGEVKEQFRTAALSGASDVKMVDDNSQLKLGEIFEPYLDDWLLQEGHIQQITDCYELQEVSGSEKAETFFCLGAAFCRYSSSAVFGTEWESPQILRGYASGLLEEAHRQHPALFAAADFTPEERMGDIRGRLRGGDGGHFTCTAVLSDILVEHAEKNFPQRLATLYPMAWR
2825738..2826355                   PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; DOE57_14390; phage(gi209447201)     6.12e-21            SalmonellaentericasubspentericaMITASFPINHSCYSVALSQSHLLDIQNRARKSGDGINIQLGSNSYSIRFLPEHDFYSVHSNSHVADHFSTEAHVMDNNVGRLEKQMNNGRTYSSAVAASPLERVQNRIDAYSFSVEKAGFPATEEHLTCPITLEIPKVGVFARTSLLSDICCLYDAAALKYLVGQRLAHPLSQEKITISHISPPEQCHFNYEKGHFMLSSKQMAK
complement(2826612..2827385)       PHAGE_Entero_PG7_NC_023561: head outer capsid protein; DOE57_14395; phage(gi589889734)     6.63e-71            SalmonellaentericasubspentericaMGGNYQGDLYVDGQRISGISIKTDSSGAPYIYTVDWAGEVKIRSYRLVGINTGFGGVITGQAYTVQAPPGTLRPLAWQMGDSYTVGIGAKQGSYNDFRVMCDALGLDGIADGISGSGWTSLQEGRVPEWRVENKLGSITRKPQYIFFSLGYNDWSADIARVRAAFPPAVAAARRICPLAKIIVIGPATPVGSTTQLNAIREAMAEMCAGLDIAFVDVSDVVNTANKGLYTGSDMVHPSDAGHIYRGVQMAIRVSELL
complement(2827415..2829334)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; DOE57_14400; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaMISGELRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANEAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEIPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFVNTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTASIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDTGGIDAEIVYKRSKKHGIFRGLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTGGTGYRTVHSVSLSL
complement(2829306..2829851)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; DOE57_14405; phage(gi169257236)     8.03e-114           SalmonellaentericasubspentericaMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESELNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRIPLVLQRKYPDLCQSHIDVVRTEIAMASGRAATIADVEKWTNDFRRAQGE
complement(2830332..2831027)       hypothetical protein; DOE57_14410                                                    N/A                 SalmonellaentericasubspentericaMAQIREMLDQSQEAQTKEQLQFLINAAQGKLNEQKEKLEKIFLNPSAEEKIRVIPDTQIRWYDEYRCNVKSGASDSIDKVIDAFFTGESGLVDGFKGLVKTGLSTILGNEQAGECQQNIYVVGMEHNAIIRVDISSWRYNYTSDGIIGKVKDVYCTTFCKSVVDHTKVRLDTLVYLISEQAGDDIDKLEDYINKLKRIWKLIENESPLSVQKRVTPLLNARYDAYLRLNKL
complement(2831329..2831643)       PHAGE_Cronob_ENT39118_NC_019934: antitermination protein; DOE57_14415; phage(gi431811056)     3.42e-55            SalmonellaentericasubspentericaKGTISSRCRCGGKGEVLDRKATSECGAPVFKTCERCGGKGFSAVPSTAAYKAILKRVPDLHVRTWTRNWKPFLESLVEICYREESRADSAFQNATRFNDDGEKI
complement(2831745..2832299)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; DOE57_14420; phage(gi100118)     4.16e-135           SalmonellaentericasubspentericaMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
complement(2832328..2832552)       PHAGE_Salmon_118970_sal3_NC_031940: thymidine kinase; DOE57_14425; phage(gi100117)     4.50e-49            SalmonellaentericasubspentericaMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
complement(2832491..2832676)       amino acid permease; DOE57_14430                                                     N/A                 SalmonellaentericasubspentericaMSDTVSYIHAFITLIFCALCKSTCASLLYEITCDIRKRRRFHAITIEKIAEIAWLYVTARR
2832650..2833345                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; DOE57_14435; phage(gi100116)     2.92e-168           SalmonellaentericasubspentericaMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDSKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYAFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2833652..2833798                   DUF551 domain-containing protein; DOE57_14440                                        N/A                 SalmonellaentericasubspentericaGQGCKTETLLTALRRRADYYAKIDAFTPEERAGHDASIEAFKAMLSTPA
2833925..2834086                   molecular chaperone DnaJ; DOE57_14445                                                N/A                 SalmonellaentericasubspentericaWNACRTAMLQGSQPVSNCDGLQVIGWLRSDYNSDDKRDPNAPLFMLGRNDPSEA
2834226..2834462                   excisionase; DOE57_14450                                                             N/A                 SalmonellaentericasubspentericaMSRMIPLLDWANEEFGAQAPSERILKKYAKGKMMIPPAVKVGRYWMVDRNARFVGTLAEPKIPANASPRLQRIIADGC
2834452..2835594                   PHAGE_Entero_HK022_NC_002166: integrase; DOE57_14455; phage(gi9634144)               3.66e-73            SalmonellaentericasubspentericaMAARPRSHKISIPNLYCKLDKRTGKIYWQYKHPVSGRFHSLGTDEVEAKKVASEANTIIAEQRTRQVLSVNDRLARMKGRRTDITVTEWIDKYIEIQDERLKHRELRPNSYRQKAKPVRLFREHCGMYLKDISALDISEITDAVKAEGHNRMAQVVRMVLIDVFKEAQHNGHVPPGYNPALATKQPRNRVTRQRLSLEEWKTIYEAAEKQEPYLQCGMLLAIITGQRLGDICNMKFKDIWDDMLHVEQEKTGSRLAIPLDLKCEALGLTLRDVVSKCRDAVISKYLVHFRHTTSQANRGDQVSTSSLTSTFKKARDRSGLKWDKGSPPTFHKQRSLSERLYREQGVDTQKLLGHKSRKMTDKYNDDRGKDWVIVNTKTG
complement(2835708..2836958)       NADP-dependent isocitrate dehydrogenase; DOE57_14460                                 N/A                 SalmonellaentericasubspentericaMESKVVVPAEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGNAIIANM
2837130..2837795                   23S rRNA pseudouridine(2457) synthase RluE; DOE57_14465                              N/A                 SalmonellaentericasubspentericaMRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPGKRTGKIYYVQVEGIPDNEALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTAWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWREIAQEKDR
2837792..2838121                   PHAGE_Aeromo_CC2_NC_019538: hypothetical protein; DOE57_14470; phage(gi423261545)     2.21e-10            SalmonellaentericasubspentericaMKRLLIAFALLTPLSVNAASFDCQKAKAADEKTICAHLALNDKDVEMHTKYQFLKGLFAMGSRGALQDAQQSWLKQRQQCKTDVTCLTKAYNERLKQLDAIYDHIDKPL
2838133..2838594                   PHAGE_Strept_SF3_NC_028952: hypothetical protein; DOE57_14475; phage(gi971759841)     9.45e-08            SalmonellaentericasubspentericaMFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQHFIRMHQWIAPDKTPFLRFLFAIKLDHICATEPHDNDIDCCRWVSADEILNAPNLRSPLVAESIRSYQTGQRYPLSMVGEFNWPFTEGVK
2851876..2851888                   attR                                                                                 N/A                 TTTTGGAGAAGAG

#### region 6 ####
complement(4543574..4543921)       PHAGE_Burkho_BcepMu_NC_005882: gp01; DOE57_22710; phage(gi48696911)                  2.19e-30            SalmonellaentericasubspentericaMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
4544497..4544784                   PHAGE_Burkho_BcepMu_NC_005882: gp21; DOE57_22715; phage(gi48696931)                  2.28e-15            SalmonellaentericasubspentericaMRKIIVPRLSGWLVASVVLFALISWASPSQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4544787..4545392                   PHAGE_Burkho_BcepMu_NC_005882: gp22; DOE57_22720; phage(gi48696932)                  2.24e-65            SalmonellaentericasubspentericaMRYQYVCLIYAMSFLPAGAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSSAGAQGMAQFMPTTATWVSQRYPALHENKPFNPVWAIRALVQYDHQLWKSVSAKNSCQRMAFTLSAYNGGQGWVNRDKKLATEKGLDAAIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
4545405..4545719                   PHAGE_Burkho_BcepMu_NC_005882: gp25; DOE57_22725; phage(gi48696935)                  1.40e-29            SalmonellaentericasubspentericaMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEIGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
4545879..4546334                   PHAGE_Burkho_BcepMu_NC_005882: gp37; DOE57_22730; phage(gi48696947)                  3.77e-15            SalmonellaentericasubspentericaMETLSVIHTVANRLGELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAAPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCERPLWLESEKYIGDAASFYRYALDMTTSTLFIAEQESKDLPLLTAVNYEEIQ
4546331..4546528                   PHAGE_Burkho_BcepMu_NC_005882: gp38; DOE57_22735; phage(gi48696948)                  2.73e-11            SalmonellaentericasubspentericaMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARHHLAPVVTQEAETNEEEIVHGS
4546518..4547933                   PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; DOE57_22740; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTSPCGPVNQPTLCLSESDAAQFGFGSDTGNFTIPQALKAIYDHGAGTVVVINVADPAKKAIRVSNESRTVDDNHQIKLVHGAVHNVVVRVSSSTVNSTLYTVDAATGVVTLPTHSAGTVTSVTYDYIDPTKVTSADIIGSVNTAGDRTGMKLLQDTYNLYGFYPKILLAPVFCTQKSVSTELIAQAENLGAITYIDAPIGTTFQQALTGRGAKGAINFNTSSDRVRLCYPHVKVYDSATDAEILEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQSEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPSVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
4547933..4548457                   PHAGE_Burkho_BcepMu_NC_005882: gp40; DOE57_22745; phage(gi48696950)                  1.70e-88            SalmonellaentericasubspentericaMAGKIQINRITNANIYLDGNNLLGRATEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHEVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSVFGCTYIKQVIDGETLLELDYLANIFRVNGVDQLNAYRNNIGG
4548509..4548826                   PHAGE_Burkho_BcepMu_NC_005882: gp41; DOE57_22750; phage(gi48696951)                  2.40e-10            SalmonellaentericasubspentericaMTQKYTLQFPFTSAAGERIDALMLRRLKVKDMRTARRTSDKPEEWDEPLMAAMTGLVPEDLAEMDLLDYQALQKRFQSMLNVVTEPAAAMAGDGATGEMVSLSAQ
4548786..4548914                   GpE family phage tail protein; DOE57_22755                                           N/A                 SalmonellaentericasubspentericaMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
4549008..4551293                   PHAGE_Burkho_BcepMu_NC_005882: gp44; DOE57_22760; phage(gi48696954)                  6.87e-61            SalmonellaentericasubspentericaMANDIITQLQARNETLTQAIARYGSLNASTLQTLSMEQTKIARLTQQLASSALRREENTKQRTNLLERTQTFAGQLGKLLNVEAPDRKLPYEFQDNMVDMAVKGGLDAAARDALSLSIRDWSLNFNQDQNALQSAASVMIEGGVHALQELSVYMPDIAKAATATRGSAQIWAQAAIATHDKLNIAPENFHSAQNIMASVAKNGGVSIAEQTQWLNRFAAKAGVQGTEGLAELTATMQIAMKNTAGASEAAENFDHFLKSTFSEKTDRWFASQGVDLQGSLLEHQQNGIGITDAMTHIVQMQLEKMNPQILDTFKQTMKIEDLSARSDALRAMAETFNLNEMFGDSQTLDFLAPMLAHKEEYRQLRSAAMQAAGQHLIADNFTVRMTSPGEQTKALQLALNDLWLTVGLALIPAINELAQSITPLVRQFSAWLRENPALIQGLARVIGVIWLFNGALNLLKLGANLLVSPFIRLVDIVLKVKASLALGGAANSALSMLKTFGKVAKSLALLLGRSLAGGLKRVGQTFIWLGRALLMNPIGLVITAIAGAAYLIYRYWEPISGFFSGVWSQVQTAFDGGIAGITRLIMNWSPLGLFYNAFASVLNWFGIDLPATFSEFGGNILSSLINGIMNALPFLNGAIEKIKSVIPDWAKSALGITAEKTAGASLSGVAGATLKSPVTGAKPAVSSSSLTVAPGKGGIKPYSLPSRAQSAIQVHFSPQVTVQGNGANAAGDINRVLSLSKRELERMINDLMAQQRRREYA
4551293..4552246                   PHAGE_Burkho_BcepMu_NC_005882: gp45; DOE57_22765; phage(gi48696955)                  3.21e-52            SalmonellaentericasubspentericaMYAVLGEIEFDVVAYWDGFDNTMGVDYASHARIEGKPGVQFIGDKLDKITLQFSFHSQFCQPTTALNRLREAMTAHQAMALVFGNGDYRGWFVITDLTTSHQHTDPYGNVIALSGSLSLQEYTGDPKNPLLPPAITAQEPNIDEMLDDFPELSDSWFDALMSAAEDGMRDAKEKLDEMADAMDDIKKTITQAKERVKEATALKEKCSDIINSLKKTISSVDALFQQPLDLSTLAGMPKALAAKLQALIDSLPGIRECADDTATLIGHAESLFDAITSSVAEATYDRAATLVYQARSTLQTTTSAVSQLAAADITRSL
4552246..4552455                   PHAGE_Burkho_BcepMu_NC_005882: gp46; DOE57_22770; phage(gi48696956)                  2.00e-23            SalmonellaentericasubspentericaMRYLEHITTQGERWDNLAWRYYGDALSYERIIAANPHVAIIPVLPSGVRLIIPVISVTQTTSELPPWLR
4552443..4553483                   PHAGE_Burkho_BcepMu_NC_005882: tail protein; DOE57_22775; phage(gi48696957)          8.79e-99            SalmonellaentericasubspentericaMAEITVSGGVFATLTPIFTLWYGHKDITYDIAPYVTSISYSDSIKNEADVIAIALEDTCGRWINDWYPGKGDTLALKLGYQGENLLDCGTYIIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLAAIASRIAQKHGLTLVGKIEALTLDRVTQYAETDVAFLKRLASEYGYAVKVTAKELIFSHLPTLRCLAPVKTLSQTDIAHYAFKDTINRIYKNATVQHQNSKQKELVIYTHDSQERASARGAATSADTLKLNSRAPDTGAAQAKANAALDSHNEYQQTGTLSMMGCPQLTAGNKIALTGFGALSGQWLIDKSTHKLARSGYTTEIDISRGPATSQ
4553493..4554215                   PHAGE_Burkho_BcepMu_NC_005882: gp48; DOE57_22780; phage(gi48696958)                  3.08e-40            SalmonellaentericasubspentericaMQGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLPVLQRNTQNNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSTVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKESTQLASPRVEVRAQHVTVTSETVDVAATSVGVKAVDVNVEATHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGALMDSGGNSNHHSH
4554313..4554672                   PHAGE_Burkho_BcepMu_NC_005882: gp49; DOE57_22785; phage(gi48696959)                  2.42e-42            SalmonellaentericasubspentericaMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPSIDGEHLTLRVQWRAADDVINTTEVLWR
4554663..4555778                   PHAGE_Burkho_BcepMu_NC_005882: gp50; DOE57_22790; phage(gi48696960)                  3.04e-133           SalmonellaentericasubspentericaMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQPAKTTLQFSVAGAYRNNVLIPQGTRASASDSVMFATHEDVLLPAGTLSVAVTATCVTTGESGNGWQPAQISALVDNIGNHDINVTNLTESTGGCGEENDDALRKRIQLAPESFSTAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVEIYPLTLNGLPGSELLAQIEREVSKEKKRPLTDKVSAKRAPRVAYQIRARLTLFTTADQETTLAAARDAINTWTQQRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
4555771..4556403                   PHAGE_Burkho_BcepMu_NC_005882: gp51; DOE57_22795; phage(gi48696961)                  4.68e-30            SalmonellaentericasubspentericaMDKRLLPPPLASDERFSILANIAAERFAQLDMTTLLVYLVDVVDASALPSLAEQFHVQGLEGWLFASNEQEKRELIKQAIELHKYKGTVWAVRRVLEILSLPGAITEWFEYGGKAYFFKVDIELVNQGMDENLFNNLVELIHEYKNVRSKLEALIVWIINQSAIPIIGCALYGGELTTVLPFQILEVQQTKPIYFGTGQWSLEITSIYPE
4556406..4557550                   PHAGE_Entero_P88_NC_026014: tail fiber protein; DOE57_22800; phage(gi744692739)      4.69e-72            SalmonellaentericasubspentericaMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPTASQIKLRHEVWRGEMNTLTTAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDSRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAQARNHTHTWNQITDVPDGTLLQKGIVKLNAATNSSSTSEAATPSAVREAYELANSKAAANHTHAWSRPTSRTAPRKKGLSLIARRIAPVRRKRQRRARRRRMIWQTAKPLQRIYIPGHNLMHDTCKMLCVQEKQIRQPLLDALLLMMVAIKCKVSNINLFRLILMVPGALFQDAA
4557563..4558078                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; DOE57_22805; phage(gi15834244)     7.01e-31            SalmonellaentericasubspentericaMKLKSVKRYYPDDMPFGENIQYFIDENGVDFYSAIEHFNLKYKLCIHPETKVIHSVSEDISKLYPAGFDIVETDNIPYDDIISGKYQFVDNRIIMRTYNEIEITQITNMEKSERLKLANKKIMPLQDAVDLGIATTEEMQKLDAWKKYRIEINRTNASNSLNISWPLPPNL
4558569..4559297                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DOE57_22810; phage(gi100101)      7.00e-39            SalmonellaentericasubspentericaMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDAPKIEGVNTAPLLYDWPGWWAKLELFNPLHPVLGSEDILYIDIDSVVVGDINPLTTMKKITLLNDFSQHGASVAPATGIMYIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGKIISYKANIATPKMIGFNPELYDGTGNGKLPDGVSIVCFHGSPRPWNTALPWVPYFSLKNTIKSKVKQYKLSLR
