gi|00000000|ref|CP031701.1|  Lactobacillus johnsonii strain IDCC9203 chromosome, complete 1898461, gc%: 34.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
14503..14514                       attL                                                                                 N/A                 AATATTTTGAAA
complement(25822..26028)           PHAGE_Staphy_Twort_NC_007021: ORF184; D0Y49_00150; phage(gi66391410)                 1.26e-05            LactobacillusjohnsoniiMQLSEKQLLALKRKRGEKNLTINELAKELGISRFTTSKILKHGLKEEITPTTAKKVNDWLIDEYTAIH
26207..26947                       PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_00155; phage(gi9633025)     5.51e-20            LactobacillusjohnsoniiMNKEALNHNRINELRLNNNKTQKDIADYLGLTEQAIAYYEKGKRTPKPETWQALADFFGVSVPYLQGAYSKDELLLRLQKYYSKYADDNFDITIDTLRNLVYFDIGEVVDEFVISKRLKPWNIKKEAPLLTKEEVADFNYWKKNFNVLFDHAATNWLITKPTLEATEKDIIGALVDALSGEGDNVVLTKRINFLNKHLYYKSRYPIKTFYDFNHPHPLDGKEYYLEDGKPYFIGDNNQRHYIEETE
27109..28284                       PHAGE_Lactob_Lj928_NC_005354: putative integrase; D0Y49_00160; phage(gi41179288)     3.93e-61            LactobacillusjohnsoniiMNDEINGIKEIEEYTTPKTGKKQYKLAMYAGKDENGKSILIRKKRLTKKQALELYYKYKMQIASGEYKPVEHKRMHLKELFSMWVKIYADTVEESTLATTSNIFNNHILPVLGNIYVDKLTVTKCQKVAQEWRQEAPRTFKRYIRYVNNVLDYGVNLELLASNPMRKIVRPKVKRQVKKQFNDFYNKEELATFLNDCKACKSTKIFTFFRVLSYSGMRKEEILALTWNDIDFHKNTISINKALKMGLKNRLYVDTTKTADSVRVLNMDSQTMNYLREWKKVQLKELFQIGINALNNQAQLVFSNSNNSYIHPSKPREWNMSICKKYNLRFIKIHGFRHTHASLLFRAGVTPKEVQKRLGHKKIETTLDIYTHVYEDESTEAIDKLANFMSN
28465..29484                       PHAGE_Mycoba_Jabbawokkie_NC_022069: minor tail protein; D0Y49_00165; phage(gi530547111)     3.17e-06            LactobacillusjohnsoniiMIEFFKTQHLVESMVSERIIPGVNYAFIKKKQVFTSTVGFASLIPKVEQLSPFALYDLASLTKVLGTTNVFLKLKEEGKLNFTEPLKDFIPEFKDERIRLSDLLTHTSGIRGWIPNRDELAAPDLLKAIIGLPVTDEFKTKMRYADTNFILLGLVLEKIYGLPVQDIIMQEIILPAKLKETTFHPKANECVPTALTESGKMLRGIVHDPKARVLGKDCGSAGLFANLEDLIKITQAYLGLRDDVLPLEQATLANLFQVETPKKVHPRSWGWDLRFDPVDQHPLIYHTGFTGTFMLIDRLNQTAMIVLTNRIHPSGHNHIFLAMREKIVDTFLKENVYKN
29507..29532                       attL                                                                                 N/A                 CAATGTCATTAAGTTAAGACATTGAC
complement(29711..30622)           phosphatase PAP2 family protein; D0Y49_00170                                         N/A                 LactobacillusjohnsoniiLTGGINLSEENQKKLFGISAIICIILLTITYFGDLAISNTLINYHSWVGTFCQTFGEFPVYLIFALCGQITMTYAWKGDCEKLLAGPLFVGGLALSLWQSKKYVNEFLGYLYSAQTNLKNGKAIAMANSDSVKGGYAGSMIIMVWLLFFVIFTLLVQWWLKNKTTKQLTRYMKIAILASLTVWFALEVNLTLKDLWGRYRPYELTSGNHEFTNLTINGVNGHKSFPSGHAMAATLCIVFSWFVSNNKRKIFFIGGIVYGVVIAISRVIVGAHFLSDVTFSFFLTALIIFIMNGLGKKLIEDF
31286..31322                       attL                                                                                 N/A                 AATCTGATACTACAAGAATACAATGCTAGTATAGCAA
31372..31785                       integrase; D0Y49_00175                                                               N/A                 LactobacillusjohnsoniiMVEIKPIRKISGELVTSIGSKQLDFQHSNLDDLFDKFVIFIDGSPNTVRTYRTSLKQWFIYMKEKGITHPDPDTVRQYREFLKASGKKPTTIQNYIVAVKRFFEWTEEEQLYPNIARYVKGAKSESSIFYKCKKRIN
31961..32848                       PHAGE_Synech_S_SKS1_NC_020851: ABC-type phosphate transport system; D0Y49_00180; phage(gi472340910)     8.84e-14            LactobacillusjohnsoniiMSRKKNKVTIVALVLLAIVTGCVIGSCVADTKGVSGTVNIAGSSALLPLAQSAAKTFMDKNPDSVINTNGGGSGQGLKQVSDGTIDIGDSDLFADEKLDKKSASKLVDHQVAITAIAPIINKDAGVKSLTTEQLIKVFTGKVTNWKQVGGNDCQIVLVSRPSSSGTRATFEQYALKKHASQSNQSLETDNSGTLVQMIQSVSGSIGYVSLSYLTGDPQVGIVSINGVKPTLKNVYNGKYTVWSYEHMYTKGQPKGAAKAFLQQMLSKEYSKKIEAMGYGVASKLLAAAKATHANK
32868..33776                       phosphate ABC transporter permease subunit PstC; D0Y49_00185                         N/A                 LactobacillusjohnsoniiMDKVVQKAIAKDKRWRAVYIACGLLIVALTLLMGAFLLYQGSQTFLKAHHSVWEFLFTSDWAPLDKTGMFGGKVGAAIYIVGSLETCLLGLLICLPFAIGSAVFMTEISPKIGEKFFRPATEIYVSIPSVVYGWFGLTKLVPIIRNAFHPKMGGFSVLAASIVLAIMIFPTITTVAADAIKSVPNSYREGAYGLGATRWQVIGKVVLPAASGGILTGVVLGLARAIGEALAVAMVIGMTRSFATSLLSPTSTLTSEIAADMGNTAQGGEYNLALWSMALLLFVISIVLIILIHKLDNGKKEK
33779..34654                       phosphate ABC transporter permease PstA; D0Y49_00190                                 N/A                 LactobacillusjohnsoniiMSRAKIKDRLMTGIFYAIGWIMLAFLLYLMLTIIFDGLKGFQWDFLGAAGNGIFNQFFNTIYLVFLSLLVSVPIGIGAGVYLAEYAKEGKFLTIFEISIESLSSLPSIVIGLFGYLAFIMWTGMSWNILAGALTISILSIPLITTETNNAIRSLPVEYKEGSLSLGATKSETIRKVLIPAAMPQILTGVIMAAGRGFGEAAALLYTSGQSTYINWQNFWKVISPSSPLNPFRSGETLALHIWAMRTEGALNPSATQIANFTSAVLVVLALLFTLVTRRISDRMRKRNNGGN
34657..35412                       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; D0Y49_00195; phage(gi371496158)      1.06e-20            LactobacillusjohnsoniiMEDKITIKKLNLYYSDFHALHDINVHIQKNEITAFIGPSGCGKSSLLRSLNRMNDLVEGCRIDGSIKLDGTDIYNGDLDVTVLRQRVGMVFQRPNPFPMSVYDNVAYGPRIHGITEKKELDEIVETSLKQAAIWDDLKDRLKKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTSKIEELALELKKNYTIVIVTHNMQQAVRISDKTGFFLLGDLVEFGETDQLFSMPKDERTEKYITGRFG
35431..36069                       phosphate transport system regulatory protein PhoU; D0Y49_00200                      N/A                 LactobacillusjohnsoniiMRTRFDKELDHLHEAMEEIGQLCKESISESTDALFTGNYHKAEDTINLHHRIHKAERDIEETCLRLLMEQQPVATDLRIISASLKAVYDLERIGEIGADIAELILKEHLSDANDMLNLKSMSQIATCMVNDAVTALANQNVELAKAVIDRDDQVDEGFGKAKAFLIDNFNKDGNPEYLINLMMVAKYFEKIGDHAVNIAKWSLFVTTGKTGR
36155..36832                       DNA-binding response regulator; D0Y49_00205                                          N/A                 LactobacillusjohnsoniiMTEIWCVEDDESIREIEMYTLEAMNFKVRGFEDGHSFFKVLDNNRPDLVILDLMLPDEDGSEILHRLKYTSATEDLPVIIASAKTAEYDKVKNLDSGADDYLTKPFGMMEMVSRVKAVLRRTNRKKEDKIEKDGIKILLKRHEVFENSRQVDLTLKEYGLLKLLITHPGTVFSREEIMDQIWETGFYVETRTVDVHVRTLRQKLGEAGKYIETLRGVGYRYHEAD
36832..38490                       PAS domain-containing protein; D0Y49_00210                                           N/A                 LactobacillusjohnsoniiMLKKIFRASFLLTSLVLFFAVLLSTIVLSIDFDHTEMSALASQAALAASGVNTSGKKYLKNLKGENYRITWINSKGKVLYDNEENPKKMGNHARRKEVAEAMKKGTGTSERYSTTLSTVTMYYAERLNNGGVIRIAITRNSFWRMLLRLLSPLLLIMLLAVLVSWFLAKTLSQTIVKPLNEMDLDKPLESKAYDEIKPLLTRLDSQNKQIADQMEQLHHREKELKTVTDAMQEGLILIDLDDRILLSNPAVVSLLGLHDTDPLPDDVKEIIDKNSRLAHTEGIVERNGRNIQISASPITSRKILKGTSILVVDVTEEYHEEQVRREFTANVSHELKTPLQSIMGSAELLENHLVKDEDRDGFYKKIHESSAQLLTLIDDIIRLSHLDENQRFEEIKLNLKSPVTEALEALQGSADRHGIKLETNLSDTMILANFRLVYEIAYNLIDNSIRYNKEKGKTKITVKEHRSQAILQVADTGIGIPQEAQNRIFERFYRVDKSHSRKTGGTGLGLSIVKHAVQQCHGTIRLESELGKGSTFTVIFPALPVGADGTNK
complement(38572..39086)           linear amide C-N hydrolase; D0Y49_00215                                              N/A                 LactobacillusjohnsoniiMEDGLHVYDNPVGAMTNNPPFPIMKFALNDYYALSCQPTAWTTSLLTALNLNTPAVAAACQATCPASPASSSPSSTTASATRMKSAQSTSSSRSWAQLNKSRACVKLPRVNTSTLSTHPATRKRGSTTTPLTATRRFTPLTCTRLTWTARNPATSCKRTCNSTSITAG
39110..39146                       attR                                                                                 N/A                 AATCTGATACTACAAGAATACAATGCTAGTATAGCAA
39204..40178                       PHAGE_Mycoba_32HC_NC_023602: integrase; D0Y49_00220; phage(gi589893371)              5.93e-14            LactobacillusjohnsoniiMVEIKPIRKISGELVTSIGSKQLDFQHSNLDDLFDKFVIFIDGSPNTVRTYRTSLKQWFIYMKEKGITHPDPDTVRQYREFLKASGKKPTTIQNYIVAVKRFFEWTEEEQLYPNIARYVKGAKIGKNFKKDYLTSKQAKKVLQDIDQSTLIGKRNYAMLALMLTMGLRTIEVSRANIEDIRTSGDATVLYVQGKGHIEKDAVVRMPEHVEEALRAYLSERKASDLKQPLFASTSNNNAGKRLTTRSISGIVKHAFISAGFNSPKLTAHSTRHTAATLSLLNGATLQQTQELLRHKNMQTTEIYAHNIDASKNPASSQVDKAIFS
41579..41604                       attR                                                                                 N/A                 CAATGTCATTAAGTTAAGACATTGAC
49078..49089                       attR                                                                                 N/A                 AATATTTTGAAA

#### region 2 ####
407192..407203                     attL                                                                                 N/A                 CATAAAAAAAGC
418106..418119                     attL                                                                                 N/A                 AAACAAAAGGAATA
complement(419817..420524)         PHAGE_Bacill_G_NC_023719: gp245; D0Y49_02015; phage(gi593777701)                     6.08e-15            LactobacillusjohnsoniiMNKLLEVKELTYRKNLKTILDNVNLDFDSGKIIALLGENGAGKTTLMRVIVGIAKHYQGEVLLNGDGSEVYRKANIAMTDNLKGLSDSTKIEEVEEFYQKLFSDFDSSKFEQLRSFMKLSNDMKLGQLSRGMREKLEIAVTLSREAKLYLLDEPFSGIDPMARKRIINSILLWKNQDSTIIISDHFVNEITTILDEVVIVKDKKIASHLSADDIRAHGKSIEEYYESLYADEGAK
complement(420526..420894)         GntR family transcriptional regulator; D0Y49_02020                                   N/A                 LactobacillusjohnsoniiMQFQDNIPIYVQIEKYLYRQIALGKINPGEKVPSVRQLAVDLTVNVNTVQRALNQMNTEGILEVRRGLGSFVTTDTELILQKRRELIKDTMSEFLESTAQLGLTPEKTLEELKKFIEEKKGD
complement(421417..421602)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02025; phage(gi9633063)     7.75e-26            LactobacillusjohnsoniiMTKYTEARAKANKKWNKNNKERVQYINKRSAAKSFILNLATEEDLTNIEEYIVERKKKLGL
complement(422183..423139)         PHAGE_Lactob_Lj965_NC_005355: putative lysin; D0Y49_02030; phage(gi41179263)         1.98e-145           LactobacillusjohnsoniiMTRTIENRAYGVDVSSFNNANTTEYTNAGADFVLVKVSEGLDYRNPKAKAQVDSAKQNNVVPMAYHYARFSGNSNVAVQEGNYAVSSAKQVGIEPGSYLACDYEQGSGNETGGNREENTTAILAFLNTIVSAGYKPLLYSGAELMKNKVNTAKILAKYPNCLWVAAYPLGNGKIANDANFGYFPSMDGVAIWQFTDNWKGLSVDGNIAVKSLSFDFNVSKPVSQPANTSTHSKTWTDVQGMTWHEEHGTFITGGAINLRWGANTQSTLIATLPAGSEVKYNAWARDKAGRVWLQQPRTNGHDGYLVGRVATEAWGTFK
complement(423143..423487)         PHAGE_Lactob_phiadh_NC_000896: holin; D0Y49_02035; phage(gi9633061)                  6.54e-64            LactobacillusjohnsoniiMKFDINLIWAIVVLLVAGMATVYSLNKQKLEKLKLTHPKLATALEVAGELSEKATLYQASIDDKDGSKKLYDATDEVFYQLQKLYPNLPLDRATVRNIVQHEYEKLSTDSKKGA
complement(423484..423702)         PHAGE_Lactob_phiAQ113_NC_019782: hypothetical protein; D0Y49_02040; phage(gi446730257)     8.14e-07            LactobacillusjohnsoniiMHDLIQDLINLAQVLTPIILGVLTWNLNSKKTKHDSLADDNDRIVKENKRLTKLNAEKDKEINNLLKERNRK
complement(423716..424114)         PHAGE_Lactob_Lv_1_NC_011801: holin; D0Y49_02045; phage(gi219563212)                  3.81e-16            LactobacillusjohnsoniiMKRTHKIGSNISDNFQLFLIGLTLSAMGILLWTDHTYFFWPPQFAGLMNDDGLDAVAVVTGFGLIYYAVTNEKSNTVAGVLLSISAGFTGLVACIQLIHAIFAGQAPMFLGFILSCFLLAEILYTARTRDTR
complement(424114..424374)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02050; phage(gi41179251)     6.39e-53            LactobacillusjohnsoniiMLRTSKSIAISGRSMVEDKQVATFNANIYEANVSGGSDNINMIITDRDLYDANKATVRKDLQDFQTKVWSAQDEVMASADEKASEG
complement(424503..429461)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02055; phage(gi41179262)     0.0                 LactobacillusjohnsoniiMLKQIKEVQDAWRATQRTLDIKVIVNGKTYEATDINSLKYDSGAYTGDTFAIGSTYSNSVQLEFSHLIENLKLGMEVLPSIGIKTSKGYIYEPLGVFIISSEIKMDRNNNLTSISASDRFCGLEGTYKSKLAYPARVLDVIAEICAQSGVKANVDDLARLPHQSDLPHPITGQTYRKALGWIAQLYAGYATFDRHGLFTIRTIAEPNYELDPSQYEQAGLTKNEAPYKISGIQCQTTITTKTRDGEDTDETKTYQVGDTNGSQIKLENNIMTPDRLTNIWEQLKDVTFYPFSLNWFGNPAIEAGDWLKLQDKQGNKFIVPNNSYTLDFNGGLSATSKADQTSSTDSGIAWEGTFSQTIRELQGRKAPDGTVIFPPSVTEPPTNAKPNDVWFKQNGNSTELWVFTEQEDGTGKWIRRDLTPDEIKKQVQEAQSGLNDAKKQIADNLAKADKDIAELNESINNQKGSLDGLSTTVNTVVIPKVTDVTNQVSDTITKVNEQKNIVTELQNQAIQQGKDISKITTDIHGVTVDLANINGDVNQTKATVQGLQSTLGNAQGDIVQIKVDAKKLEASLSGKVDNSTYANFVSATNNALNAKLVASDLNGYAKTTDLQATANGLQLNINNVTDKLNNLRIGGRNLVGKTDKEYVMGFGIPNTVWKDNFAYTSLPLISGDGVEILPQGTGFWHVLSPGEEYTQTIWIETDAIIKSLNGTFLTWLTMDDGHDVQKAHIQRIGNNSYKIIGSYTWPQNKKGNRVRLFDIFNLPNSIDLKSGTYLKFGKLKLEVGNASTDWTPAVEDTEHDLESLSARITINSQQFGSYYTKGESDNRTNTAKNEVINSIKNDSNWHGLTNILTNSGFIQTADGFIQKVQQTMQPIINENNSGGVNLLTNTYTLRNFNNADNAGEATGFGIESGDSHKNELNAGEISTNVFHVYAKDLNHAPVYFGQNFTLPKGTWTLSFLVRHNGSSEQKIRLSFYTDDCANRGWIPLGTSDEIDNSWKRHQVTFTTTQETFEQNPRLHIPTGDIVPGGSLYFANFKLESGSIATTWCPAPEDLAKQVAVTELGQTIKGLQSTVSSNYGNLQSQISQTAGTIRNEITDRTNNLQSQITQNANNISIKVNAVGDLSNICLNPTFIDGSTEGWENVFSSSGDPGSPTKFYGGVNTRNAFYGNMFAVAAGDKYFFSVFAWQNQSTHPLNIGFTYLQKDGTWNWQSAINFAPNEGTRTKSGSITIPKEAVKARIWVEIDSYSDFGNWWFTNLIVRKNDTISQINMSAGTTLIQNDKIYMDASSTVFSGKAFIPNAAITNISADKINTGTLDAGRINVINLNANNITTGTINGANLKINLNSGEILFQKGRIASTNGNLNIDIDSGTMSVTNWMNEGVYFKDGKLILDDRGFGGLIADNPKYGVIQRSNQMFNNNAFGMELNSPNGVSLRTSNYDGVINTGSGLDGTKNGAVISVDKDGSAVVNGAGTTFLTGGPKFSQSKYSIGTRPHIWIGTFNARLGDRIEIDANYIHLPTTYYRTTGSAPNLCIASDGALVRSTSASKYKTDIKRSYSTEYGEKLLNLPTAIWTDKGQKERYKAGKRHIKPEKYFGMIAEDLADAGLDLLVSRNPQTHEIEGIQYERIAPALLPVIKKLKDKVNRLEKQTNER
complement(429473..429829)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02060; phage(gi41179261)     1.85e-71            LactobacillusjohnsoniiMYSLKISGTVVNPAPQTMQVAIQDIDAKATRDAQGLLHRDRVATKRKINLSFGALTVSECAGILASVKAEFFNVEYLDPETGQNKSGTFYVGDRTAPVYSFVDSVPVWKGLSFDLIEQ
complement(429848..435901)         PHAGE_Lactob_Lj965_NC_005355: putative putative minor tail protein; D0Y49_02065; phage(gi41179260)     0.0                 LactobacillusjohnsoniiMDLEELELRFTANYGDVMQKLDEFTNIISQKTNDMQYKIQDGLGKISQSMNDNVSKANESAREEVRQRTEAEQAKQKLLEQTLNTQNEVTDKIVQGNKEQAESSKEAVNQSEKSLDSLTARLQEASNMQQRIAQQTSTAHDVVKDISRPKSQTQVKEPLKSTSQNDYSSFDNYQEKRIQSYMPKRPVDLGIDDEIRAEASRAKKEVDSLVTHINEKMEQARSMQRRIATLTANRDNLDMSKQGSKVKAMRLDDQIADAQIKMERYQTQAKALAQEMSQELDTVPNSLRRIEREMDQTEGKIERIRRSIAEMRDNDATLGRSSGTNKEIKNAEAEYRRLVARSNELAKAYTYVSARGDELKASSSRINTELSEESKSVSGLSSKFNRLRNTISNVNSSLKRFGNSGSSSMRRAGGGASMLSERLKGVRMAMRMLASQLIVFTLLYQAIMMLAQGMGAALMTNKQFASSFNAIKVNLLTAFYPIYSYVLPAVNALMNSLRKATAWIAQFSSALTGMSLSSARSGAHGLYDQVQAMNDTSKAASKANEAVKKQQQEQAKAVQRANQQIAQANRQGAAAVAAENERIKASNEQAKKAFEDTKKANEDLQASLMGFDELNVLDNSKNNQDNGSFDAQPLEKFTPQQKQDSPIFDDAGLDDSGAGDGNQGLDWNVPLEASQNAIDAANKVKKVLGELFDPMKKAWDEKGQAVVDAAKYSWQEIKRLLGDVGNSFLHVWDNGTGQKVMENLLQLLADMLNIIGDIARAFAEAWEESGRGTRFIQAIFDSLNNVLVAIHHIADSFREAWNTGDLGKRIFANLLDLATKLVEFIGDIAKSFDEAWQHGNAGTKLWQAWLNALNNILDIYKNIATSIDEAWKHSNLGVSIWSHLIQIVTGVGNTIGNLAGQFDKAWQHGNVGTSIFKTLLGMVDDMLGALGDMATYTSNWAKKLDFTPLLKSIDNLLKSIRPVTKDVWDGLSWAYKNVLLPLAGFTITQVIPEFFNALAAALKVVHSVVKAAKPVFEWFYDSFIKPLAKIAGFAIVEALKLLTKALEGLSDWIDHHQTAVKIMTATLLTLLGIKVARATIAGIQSFTDTLKILAMLKFDKLKAGVKYADDMLGVVIEFAKHPILNIKELAKLSFENIKGGYAHIKDLWSEVNQGWQDSNLAKTDFLKSARSSIQSGEPMKLGQKLGTGLSGAMIAVTSGIDIYKGIKAKNKEEKFADFGSGIGGAVGGAIGLWFGGPLGAAVGQQVGSFIGKWGGVGASKFGDGWAKYGKGKKPKDWVEAIGFKSHEILDNFTSWAKSVGKDINTNITKGKKEVQTASSNIHKWSTNFISDAKKDIKNWAQNVGSNINKDIDKGKKLAKQAGTKVKEWSTDFISDAKKKVHDWSSKIGSDVNNSVENGQAMAKNAGTKIKNWTTGFRESASGLVRSWAERLGDHINNGSESSRSGATNAGSKLSSWTRSFFGNANQSISSWAGGLGGHVDNGIGNAYNSARNAGERLGSWVSGFRHNTSRTLGSWAGTLGRTIGDGIRSGIYNISSAVRKVVNAIVNPVQKATNKIKEGIDWVLNKLGGGSMNWGFFNWNSYATGTDNHPGGLALVNDQEGDIYRESYELPNGEQGLFPAKRNFLTYLPAGTKVKTATNTANELAGMVPKYAGGIGNFNFDFSGIFSGISSALGNLNFGNFFDGVGSFVDGVMEELEKVTDDIAHPERLVNYIVDKFVTYDWSLGDASLKFAKGAVNQEKKGMMNWAKKVINQFGGSTHQTGPGAEGWRSAVKKALRKNGLPATPAYVNAWVRQIQTESSGNPHAVGGDDGLSDGNATGLLQTKPGTFRQYAFPGHGNIFNGYDNMLAAINYAKHRYGSDMLAVIGHGHGYEDGGLIAKHGFYEIGEGDKPEMVIPLTNRELGMRRINEAIAFMNNNFGSGLQLPTSLNRNSISNDSIYAENQSNTSTMKSGGFKEMSTELVNAIIQALQMQNINSNNGKPIDLHLSVKIGDESFGEHAIKGINAINQRNGRNMLNL
complement(435901..436188)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02070; phage(gi41179259)     5.57e-53            LactobacillusjohnsoniiMDFGEIMTQINANETRRLEDLRAKAYMDHRLSEMVAFAFNDPAKMPKVEEAYPFVKDNVEETSKTNEPDWKQDQALLMQQAQRIKQFNKDKGGGS
complement(436281..436694)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02075; phage(gi41179250)     6.36e-79            LactobacillusjohnsoniiMVTTIKKATKTVQLGDLELDLKLGGREIFKIERRLGKSMLSLFMDSQGGNKLPPVNEILIVLQGANQNHGVTDKRVIEAFEQYLDDGHTTMDLFNELMELFDESGFFGKKKKKATKTNTESEEVTLDSVETTEDELM
complement(436760..437251)         PHAGE_Lactob_Lj965_NC_005355: putative major tail protein; D0Y49_02080; phage(gi41179249)     9.46e-111           LactobacillusjohnsoniiMNNVKFYSDLLTLDLQRFAVDSSEGLAGTGTTLERSVDGSSWDEIADIKTIPELGGDTEKIDVTTLADDRRKQVEGIQNASNVQFQAVYKGASFAKALAQAGDRKQYQWKVTYPDGMTATMKGSYNIKFGSVSVNGALGYTITITVSDGPTFVAAGASQSVGK
complement(437254..437622)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02085; phage(gi41179248)     2.96e-78            LactobacillusjohnsoniiMEIYNVKALVFKTLKSIPELKMVSPSYPGKFTVFPTAIYSTSQSSYIRNAYQEETDTEWKITIDLYNDKGSLTQIKNKLIAKFSAMGFSNSVGDQDLNGVSRVVIVFAGIVDNTSHRVYQKG
complement(437623..438171)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02090; phage(gi41179258)     7.94e-113           LactobacillusjohnsoniiMINVELKGLDELKTKLKKLPSVVASATANGQETAIEQAEAYAVDELQSSIKYSTGELARSFKHEVKIDNDEVIGRWWNSSMVAVFREFGTGLVGEMSDKQLPQGVAITYRQTPWFFPVDSVDLDLTKIYGIPKIKINDKYFYRTAGQPARQFMTPAANRIEKEAPEIIKNSVDQELRDKLGD
complement(438164..438517)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02095; phage(gi41179247)     1.54e-66            LactobacillusjohnsoniiMRLKESDLTTVYIRKPADIQDDEGYTTKGWSDPQSIKMNVQSAGGSVNAQLYGKDIKYVKTCKYQGKELSEGHGEGYGICLNVPGTSNPDYKITAIQEFSTHKNVTLERIKRDEQND
complement(438514..438813)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02100; phage(gi41179246)     2.90e-51            LactobacillusjohnsoniiMAEMVSSLSTRLQVSDNDLVTDLIKEAIAQVLDYTSQKKLVGNMDIYVKKLAVINYNRLGIEGETQRSEGGVTNYIETGIPKDIRLGLNHYRIAKVTRL
complement(438840..439889)         PHAGE_Lactob_Lj965_NC_005355: putative major head protein; D0Y49_02105; phage(gi41179245)     0.0                 LactobacillusjohnsoniiMKDQKLKLNLQRFATPILDMFSQSTVLDYTRNRQYPDMLGDALFPAVKVPTLEVDILKAGSRVPTIANISAFDSEAEIGSRDASKMTAELAYVKRKMQLTEEMLIKLQAPRNTAEENYLKQYVFDDIDAMVQAVKARGEKMTMEMFATGKITDKSNGISIDYGVPKDHQTSLTGTSAWDKDGASIIENLQDWSDKLDITPTRALTSKKVLRTLMRSTEIKEAIFGKDTGRVVGQSDLDQWMTAQGLPVIRAYDGKYRTEDAKGNLTTQSYFPEDRIVLFNDEVPGQKIYGPTPEENRLVSSNAQVSNVGNVMAKVYETSEDPIGTWILAAATMLPSFASAEDVFQAKVL
complement(439905..440276)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02110; phage(gi41179244)     6.57e-69            LactobacillusjohnsoniiMYTQFQNGKQLNFLASEKFTAFPETINKDNYNVKTDDLGRKYIPAGTVYPTNDAKAIGITVNDVYVTDGDTNQMVAVMREGWVLSQRLDRVPTAEAIKAMTAIHFKDLETATTPSTDDTHKAQ
complement(440289..440930)         PHAGE_Lactob_Lj965_NC_005355: putative scaffold protein; D0Y49_02115; phage(gi41179243)     1.77e-136           LactobacillusjohnsoniiMENKFYEGLLKLDLQRFADEGQGEGGDDNNTQDNVKDDSSTDEQPFKTFSTQSELDSFVDKKLAKALDTARSKWEKEQNDKAQKAKDLKKMSPEERQEYEFKQREQALLDREADVTKRENKSKLATQLITDGLPAELVDVFDDILTDEDKMTDTYQKVSDVFRSAVHDAVETRLAQGAKPPKISGNTQTNKTTGEIFAERANESQKVKNDFWN
complement(441100..441306)         hypothetical protein; D0Y49_02120                                                    N/A                 LactobacillusjohnsoniiMSKLIPKEYDNVILKTGELVGLMDQLDETHFLPDYGVETPEQEKKTMAMKPISIDDIEKVVYRPKGTH
complement(441845..442888)         PHAGE_Lactob_Lj965_NC_005355: putative minor head protein; D0Y49_02125; phage(gi41179242)     0.0                 LactobacillusjohnsoniiMKVNKKKFTYWQLRDLQDEQRNQDEATERLKIINNAYQKAQSYLSDEVQKIYRRYFYADITKDEVATIMSSHISPSELVTLKALSSGITDKGSRQAVDDYLGRLAAKSRITRLEEMQLKAYIAAKSAGATELDQNVKLHTKIMKHAWSEAEKQSAVYDTTKDYTFHSSHSVEVKQDKIVIKNPDTGKEVATVPMDKDIPKSKVTEIPNRYVEKALETRWKGKNFSSRIWGNTDKLAERLQELFTVKELSNLPEREMIKRIEQEFNVGKFYASRLIRTEANFFYSKIKLDNWRKRGVKQYQLLAVIDSRTSKICRSINGNVYNVKDAVFGKNVPPLHPFCRTVPVIYLG
complement(442894..443181)         PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; D0Y49_02130; phage(gi41179241)     8.30e-63            LactobacillusjohnsoniiMIRVRMIKKPNQTIIRATGHAQYSVKGSDIVCASFSTLITHTVNNCTKVTATDKDGVLIAIFSDPKSIKNKTLLNAFENTVNQLIDQYGQYISWC
complement(443111..444607)         PHAGE_Lactob_Lj965_NC_005355: putative portal protein; D0Y49_02135; phage(gi41179240)     0.0                 LactobacillusjohnsoniiMAVVIDKDLLADVNEPNIEAINYAIRELKKRKKRLDNLSSYYNGKQNIEKHEFDNATVEAANVMVNHAKYITDMNVGFMTGNPVKYVAEKGKNIDDILEVFNQIDIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELKIEVIDPRATIVVCDDTVEHEPLFAVFIQEKKDLDGNTNGYSITVYMPQRIVEYRTKMSMEVSANDPIVYDGENLFSAVPIIEYRNNEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDAILVTFGFGLDDNEDIKRLNRGAIEAPPREEGADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMGNVSGEAMKFKLFGLENLLSIKQRYFFDGLRRRLKLIQTIVNIKGANDDASGCKISLAANIPSNLSDVVNNVKNADGIIPRKYTYSWLPDVDNPQDVIDEMNQQDAETIKKNQEALRGQDPDRLEVEDDQDDSSENDKKAESNNNQSHRTRAV
complement(444623..445897)         PHAGE_Lactob_Lj965_NC_005355: putative terminase large subunit; D0Y49_02140; phage(gi41179257)     0.0                 LactobacillusjohnsoniiMKTVRFNFTPFSKKQLQVLSWWANPDLKDYEAIICDGSVRAGKTVVMSLSFILWSMTNFTGQQFGMAGKTIGSFRRNVLRPLRSMLESEGYIIHDSRSENMITISKNGHTNYYFIFGGKDEASQDLVQGITLAGFFFDEVALMPESFVNQATARCSVSGSKMWFNCNPAGPYHWFKLDWIDQMKDKRALRLHFTMHDNPSLDSVTIGRYERMYSGVFYQRYIQGLWVMSEGVIYDNFDKDTMVVQELPSHFEKYYVSCDYGTLNPTAFLLWGLNHGTWYLIKEYYYSGRTTSRQKTDEEYCEDLKKFLGNIKAEMIIDPSAASFSATLRQNGFRVRKAKNDVLDGIRVTQTAMNEGKIKFSMNCPNLFKELASYVWDDKAAEHGEDKPVKQHDHACDAMRYFVYTIIYKKVTAKVTVRPRVRGL
complement(445884..446741)         PHAGE_Lactob_Lj965_NC_005355: putative terminase small subunit; D0Y49_02145; phage(gi41179239)     2.16e-170           LactobacillusjohnsoniiMSKMEDAKADYLAGMKYKDIAAKYGVALSTVKSWKTRNKWQRNNATKKKSMHTKSKSTRTKPKKVAPSLLPPELPDNDELNDKQKAFCLYYLQRYNATWAYQRAYGGSYEKAHSNAARMMANDGIKKYLTELKKQQSQDLYATANDILLRYLNQATSNVTDVLSFRTEKHLAYYKVRDKNGPYEDGGGNFRYVPKIDPETGEQAYYYEHLITLKDSKDIDTSNIKSIRIDKGEAVVEMEDRQKAMQILLDRLPKPEVNDGSTTSLLNALTGGMAKIWSKDDNEDG
complement(447043..447510)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02150; phage(gi9633037)     1.39e-100           LactobacillusjohnsoniiMSLLFEELDCERTCNKVDDFLTNDLDRLILMAGRNLTDLRSPSLSLTPAHSNGTNHAESNIIRGLNAEAEVRAIHRTIYHLPEMSKVIMRDLYIYRMENWQVAEAIRYSHTQYNVLKHRAQLFFADSFDHWQRYMKCSPIIDLHEYKETGNIPAR
complement(447539..447832)         PHAGE_Lactob_JCL1032_NC_019456: hypothetical protein; D0Y49_02155; phage(gi418489168)     3.35e-08            LactobacillusjohnsoniiMKSFSEISKALDSFTAKKNEAYGDAYGKNFDTFGLTYSAIEVFNKVNRIVTLTKNNQGSANNESLLDSYVDLRNYAEFAIQHMLPDASDEDRSKYGL
complement(447898..448386)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02160; phage(gi9633036)     3.00e-23            LactobacillusjohnsoniiMALTNEFYRTLHILEMNYGSITNVPDDNEDIIRLHKITQVIDPKRRTTALKLLEQGYARYQISQETGLPVSLIVQIRKYNHLPIVPIFNYRIDNIYIQNAHKAADYFKLGTYHSAINHLRRLGHHIDNYEFIWSDIPIGGKYMGSSGKIYTKYSDDIRTYSH
complement(448370..448981)         PHAGE_Lactob_phiAQ113_NC_019782: HNH endonuclease; D0Y49_02165; phage(gi446730230)     5.06e-42            LactobacillusjohnsoniiMVEVWKDIKGYEGKYRVSNKGRVKSLERFRKNGFKGYIQKECIMKLKTDVKGYKYINLSINGKRSTYQVHRLVAIAFIPNPFKYTQINHRDENPSNNCSNNLEWCTSKYNNNYGRHKYRLSKTKQANEYVSIAIHNGKKASKPVVQLSLDGKIIKYYSSQNEAAKLNHIRQDGISACCHGKHKFYKGYKWIFAEKRYDNGFDE
complement(448987..449346)         PHAGE_Lactob_LfeSau_NC_029068: DNA nuclease; D0Y49_02170; phage(gi985757765)         1.26e-52            LactobacillusjohnsoniiMSESEHSIQSQIQVELSKHHCTVFRANVGKVRTPDGRFFSTGLPSGYTDLSGFRWVDGKAFFIEVKNATGKPREDQIRFHRMLASHNIIHGIARSVDDARMIVEGGLVGWGFEDYDESE
complement(449370..449612)         hypothetical protein; D0Y49_02175                                                    N/A                 LactobacillusjohnsoniiMLAIKEKCPYCHHGEQGFIKPLIRYTGETGFMGDMDYHETALDIEHNQLYIQGYVSNLGEYCFETNANYCPMCGRKLTHD
complement(449606..449812)         hypothetical protein; D0Y49_02180                                                    N/A                 LactobacillusjohnsoniiMKLNEQQKFMLKKLDPLLEQASIAFLDDSEHFSYLVNHVLAKLGNMSFTELTYLKDEVNEIVKEDMEC
complement(449815..450015)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02185; phage(gi9633027)     6.33e-25            LactobacillusjohnsoniiMMLCMARAYVEKYNPKVKLSQKQLIKMVHQIQPNEPLPEKIDSYEIKPCNDFSGRGIISIFYRLGD
complement(450012..450278)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02190; phage(gi9633026)     3.04e-07            LactobacillusjohnsoniiMEVIDKRGEKQANDWQVGDVVCFWKDAENKRYAIITHISQEDGYGLTNLGVNAGIEQFLFAATASSTIDILIDRGYHFEKVNAKLVIE
complement(450278..450556)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02195; phage(gi9633028)     3.34e-14            LactobacillusjohnsoniiMVNDKLIYAVEIFEQYNIDDPSSFTDFDINTVLFKDYDDACKYLKLLKQTWIEDNIDPEDIYEFSNEIGIQPSEAFNYGFYKQASIKEKELN
complement(450584..451168)         hypothetical protein; D0Y49_02200                                                    N/A                 LactobacillusjohnsoniiMVDILEFKPGIDNGKYKVYIVKTGWSDLADCIVSNYDLVLSNSPEIILPTLIHKYLHLPWTTSDHGYWKHPTPGFDVTELDLSFDNSKYSNKYKDLKDYLKSYHDGNLKSINSIHILTYDIESNGVNEEYAKHEVIEFSFKVLDKLIKAEDEKISKRKKEARQKQADAKFNQLIDDISKLSIANKQKILAKLVK
complement(451190..451540)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02205; phage(gi9633025)     1.91e-25            LactobacillusjohnsoniiMNRLKELRLNNNKTQKDIADYLGLTEQAIAYYEKGKRTPKPETWQALADFFNVSVPYLQGELTYDDLTPEGKKLEDRLGRTINDAINDELKYSELSSEENRRAIKLALQSALGYYA
complement(451971..453254)         PHAGE_Lactob_LfeSau_NC_029068: hypothetical protein; D0Y49_02210; phage(gi985757764)     4.10e-120           LactobacillusjohnsoniiMVLDKKNVEKLRKEQNQGSRFPYNFLLNANGNIKTTSVTNVKIIIENDPLLRDVFRYNEFTQNIDVVKDVPDLHIEKGKTSDDYSLEILAYIESQAKYGHTSFKNKLVQDALILAARNNSYNPIITYFDKAYEKWDHKQRIPNFLHDFLGVEQSAFVEWVSYLFFVGAVAKAYDPSTKFDQVLDLVGGQGAGKTTTFKKLAPLGYYTDDFNTFTKKDDLSKTRDALIINDDELTATNKTSFEELKKFCSKQEFRYRLPYGRGVEIFPRRFVMVRTTNERYYLKDQTGNRRFMPVLCDIDKQKFSPISDLTPELVEQIWGEAVDQYKNNKFSLKIDKAHLALIELNCEKFKYSDSFEDAIDEVIENELEDRQFITNDELFMKVAPDVNFSKNKKMAQKLQYVMVAKYGYEKRQKRINGERKWGYEKCH
complement(453254..454051)         PHAGE_Lactob_phiJB_NC_022775: bifunctional DNA primase/polymerase; D0Y49_02215; phage(gi571797868)     6.85e-113           LactobacillusjohnsoniiMENLVNFAVNYAKHGFSVIPISHTEKRPLIKFANKPALTPDEIRELWKRYPLANIALKTENFFVIDVDRHGEVDGMNSIVKLKHNEWFQNTLCERTAHDGYHFYFQKPVDKTITQNIGFLPGVDLKAHENNYVVVAPSSIDGKHYKWLNHKPIAPAPKELLELIKEKSKSLKPYGKDKMASYSVSGKNQTSELFETIVNGFGETGGRNNACAAFMGGLLYRNVDPEIAVELAKIANSHTKDKLSETEVETTANSMIEKEIRRRGA
complement(454073..454690)         PHAGE_Lactob_phiJB_NC_022775: hypothetical protein; D0Y49_02220; phage(gi571797867)     8.85e-48            LactobacillusjohnsoniiMSLLDVANKLDESGFDPNKGKEASGRTELPEGEYLVSFDNITHNASGDKDFLMLTFKVLQGEHADETESIFPTLAETTSTGKAMPDFVISRAISQIKIVGAMCDIVVPNKVFAGNSTQAYEAIVPVLRPGIGTMMKLKKTFTENKKNPDRPYSNYEFSKAKQPSMPKPEDSTPTDDEDPFKDAKTGMEINSNDLPFDVSDMKENA
complement(454710..455015)         PHAGE_Lactob_phiAQ113_NC_019782: putative transcriptional regulator; D0Y49_02225; phage(gi446730276)     3.96e-23            LactobacillusjohnsoniiMKNRIKELRKDKKLTLVELSKKVQIPNNTLSQYENEKRKPKLETWQALANFFNVSVEYLKGYLIAECRWCGNKFVLTSDKDKDRYFYCPYCGRSPLTFKTK
complement(455015..455698)         PHAGE_Strept_phiARI0460_1_NC_031913: membrane-associated initiation of head vertex; D0Y49_02230; phage(gi100034)     5.22e-43            LactobacillusjohnsoniiMIKFPEDKPRVPKKEPRYFFIYGKPMSGKTFFASYFPHALDINTDDNAEQSRVPFVSLLKDENDEPVSDIRGRLFEIIKGLPQTSFKTVIIDTIEDVVDAITKQITDEAGEKYISDGKLSYGKGSGMVKKVINDLVLDLKALPVNVIWISREEEQTDIASGVTKNIPALKQKYYNIIAGNCDLVIRTQKTGKEHIRVIEEKRADYKPEDISDEQVRKLLTSCLGMFN
complement(455709..456014)         hypothetical protein; D0Y49_02235                                                    N/A                 LactobacillusjohnsoniiMENSIEKNMKIAKVKQALREAKEHLDKIHKLELYCVKKGFLKTGEHITFEQLNDLNFWQKIIEPLYDDHVEMKWLITKPTLEASEDDVLSIVDNAISSELI
complement(456081..456446)         hypothetical protein; D0Y49_02240                                                    N/A                 LactobacillusjohnsoniiMSKEISKNYLDEIIERKANKRIDQMLENLCGAFPIEINGNGNLSIQFNNKCGELSGTSIASFNHSFGLLNNMGNENELNKFTNWPEIREKLFEKYKEDETDYILRQLNGINTFINNYDEMG
complement(456439..457827)         PHAGE_Lactob_phiJB_NC_022775: type III restriction protein res subunit; D0Y49_02245; phage(gi571797865)     0.0                 LactobacillusjohnsoniiMLKLRPYQEELVNNIYHSLSSGHRKIIVQSPPRTGKTVVMAKIAHLTTNFGNRVMFIIHRKEVLEQAKNTFNTEGVDMSLTTMGMVQTLTRRVDKLPKPKLILIDEAHHALAKSYQRILNKFPKSYVLYFTATPERTGSKQLDQIADDIIVGKSIRELTDKGFLAPFDYYSIDDIDTKKLKKSSTGDYTNASMEEAVSRKIYGHIVSNYQRLADGKQAVVFTYSVESAKEIADAFNKVNISAVELDGSTPDNLRDRIVKQFRDKKIRILVNVNLFTEGVDLPDVDCVIMARPTQSLALYLQFSMRCLNPREGKRAIIIDHVANWKTFGLPDSDRDWKKAIITTDKGKRKKKETATFAITQCDYCFAVVPSGKVKDGKCPYCGKPIKVRAKVEQTDDELKLINDRKRVIDEILHDEVMQQVADKSPHDLHTMKELQAYAKLHHYKRGWVFYQAKMKGLIKKNE
complement(457831..458133)         hypothetical protein; D0Y49_02250                                                    N/A                 LactobacillusjohnsoniiMTDKKVMLDQLNIMMDEVKNGNVTDLIMIGKHKKFGKIDSIISDPVIALGLVEYLHIDAKSEYLNRKKLDDIRDNFLNNENPEWGLDEDGEFYYKNFEKD
complement(458136..458402)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02255; phage(gi9633017)     6.55e-35            LactobacillusjohnsoniiMLEEFQKWQYDTEQAINEWPDKLVEEALKQGTYDKAERWLKRKQPDYSDSFLGKPEEQFIVTIKAIYDEAIIKLRKLAMRQQISNRSK
complement(458396..458737)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02260; phage(gi9633016)     3.68e-34            LactobacillusjohnsoniiMEVKTGKELLETIYYEDAQKRINRYKGTDSLVVWCDNNAYIIGYEMGSDFHTISEFLNYRIRMIGFEEFTHEINSTEFDYITELHNEIDEGDPRGYLQTVLEESYHMEDLSQC
complement(459159..459407)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02265; phage(gi9633013)     5.54e-32            LactobacillusjohnsoniiMQCLKKMIAMTKVLTPKEVQEKYHWKPTTWRRRREACLVSPYKDAIVLESMRKCHVKEDRFEEFLDWQSQHVYNEMFGVNDE
complement(459495..459683)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02270; phage(gi9633012)     2.97e-23            LactobacillusjohnsoniiMPSTMPGRELIKNYLKERSISIADLAKAYGLARQDVTDYLSGRNTSPKSNQFVLKVIKDLKI
complement(459781..460425)         PHAGE_Staphy_Twort_NC_007021: ORF031; D0Y49_02275; phage(gi66391286)                 1.19e-06            LactobacillusjohnsoniiMDLKEFMAQSYYDFHNPSKPLKISKEIFLKRAKYLGPEYILSSEYKGSTQRVIFYHTKCGKEWAPIAGEVMYKHSHCPCTSKFRNHGYGCNRVDKFLESHNCKRIGEYKDMKHPIKIFSEKCKHTFLRTPDILLNQKTGSKCPICRKKPARFQISNFMKEEIKWRKSKGFTQKDVGDFIHCSDHLISDFENGHKRPSKKQIAEIKNYMEALTIR
complement(460430..461062)         PHAGE_Strept_315.2_NC_004585: hypothetical protein; D0Y49_02280; phage(gi28876235)     4.98e-66            LactobacillusjohnsoniiMQFDIKTVNQILGIDDAYKAPDRLLGLMLNDNERVATFKKFLKVSTDLSFDWFHEYFEDEQAERKSKKQDFTPDSIAMLLNKLTSKTNGYYYEPAAGTGGILITRWWQDCRTDPVHLHDGRISKLAWITYDPRSYWYQVEELSDRAIPFLIFNMAIRGMNGVAIQCDSLSREAKGAYFIKNDTDNLLGFSEVIKVPKTSNFEKELNIKWK
complement(461065..462012)         PHAGE_Strept_TP_J34_NC_020197: integrase; D0Y49_02285; phage(gi444475875)            1.91e-43            LactobacillusjohnsoniiMSSKVRHIKFYKYYKEWVDTYKVGQVRPVTLNKYYLVEKRLKELVPDLDLGDMTRADVQRLINEYGKTHEYPTVLDFLHHIQAPLRDAVYEGWIAKDPTYKVHATSQVKHKETRFKYLESDQVSKLVKVLEKDDSPEALMFLFDLKTGLRFAEIFGLTPKDIDLKNLTLYVNKTWNYKEKTGEFQPTKNKYSNRVITIDWQIANILQRMMQGYSENEPFWLNKLQSKNGRIYNSTLNQKLTKFCKEANVPRISIHGLRHTHASLLISAGVSIQSVAKRLGHGNTETTQRVYIHLLDDLQERDNNKMMTILTGLGA
complement(462281..462502)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02290; phage(gi9633008)     2.25e-43            LactobacillusjohnsoniiMNYENVKDALKELVALNSPGTTFGKVSTIIDSGIKTGNRKFEVKDLQESNYELLANVCDLLGMSEIYLDDGEE
complement(462529..463260)         PHAGE_Staphy_StB20_NC_019915: transcription antirepressor; D0Y49_02295; phage(gi431809735)     3.39e-70            LactobacillusjohnsoniiMESQLQLFKFESHQVRTLIINEEPYFVGKDIAIILGYKKPENAIANHVEDEDKTTTLIQGTGSNYKSKTVIVNESGMFSLVLSSQLPYAKRFKHWVTSEVLPAIRKTGSYQLPQTPEARLKLAMEATIHLDERMTNVEKDVDFIKNTSEIDSNQRFKLRKARDRKSVEVCGGKKSNFYKDKNKRRKVFRQLEHDFKDSFVISRYEDLSKKDFDRAINFITNWYPSYPLQQDIQQMNAQTDLGL
complement(463276..463464)         PHAGE_Lactob_phiadh_NC_000896: Rad protein; D0Y49_02300; phage(gi9633005)            6.87e-09            LactobacillusjohnsoniiMNELVKTIQQLAKAQGKTIKDVAREAGVGENAIYRWSTNEPKISTLRRVADVLGVDYKVLLP
463728..464099                     PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; D0Y49_02305; phage(gi100029)      1.88e-18            LactobacillusjohnsoniiMTTFERIKKLSKNFDLSLQDIAEQAKIGINTIYKWKNYDPKGTDLAKVANILHTTTDYLLGRTDDPSIPNNSENHINSNTLTWLDLDMPYGGTVPDELKDYYKAMAEQYIKQHPEILEKRDDK
464099..464494                     PHAGE_Lactob_Lj965_NC_005355: putative repressor; D0Y49_02310; phage(gi41179223)     4.65e-24            LactobacillusjohnsoniiMDNVLAWLSNYAMDHGIGIIFDKKLPPDAPSDSWEFPPIAIINSNWYNKNELPFITAHEICHVLYGSAEYYHSACRGMESGESDANLGAIKLLLQYAQETDMHFATYYQFAYAFGIPKKHYYLIDAYLIAK
464528..465073                     PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; D0Y49_02315; phage(gi41179289)     5.79e-22            LactobacillusjohnsoniiMKREIISLCAIALVGVSIGALGLSNHHSSNVKQADEATTKVTKDKSHKKSSKKSVDTAKPKENSQSQAQSKQPTNVDVQQSKQSSSTAKSQSQTQNTATQQQQQPQKTQGEINKERDYDPKGNPVMPGQDHAPGSNSDGSADSWVKGQSEWLRQNGLTNPDGTLTQKAKDQRAQEFKNESE
465078..465091                     attR                                                                                 N/A                 AAACAAAAGGAATA
465096..466013                     PHAGE_Staphy_PT1028_NC_007045: ORF005; D0Y49_02320; phage(gi66395169)                2.16e-18            LactobacillusjohnsoniiMSEYKRRYTNAEKRKKLAIFNSVYYEGDPNNWKVSRLPNWMSFYGYELDKELHGESPKYFRQFKQGTIVMIDYGVPVGNELGGRHFGVVLSNNDTKFKQKIMVVPLSSHYHRGYVDLGYDLMKGISSLILNRIDELIATLEVMRNRLIQFEKKSSKRSFDFSPEEFDFLKSHNIDTSLLHDGNVTIHFEKRNPIFEKLIKNIKAIDSWENYSNIFEFVSYFDTIFSLQKEAFEKLKFKEDTIAQLEELSNKLNKYNKQSFAVISDIKTVSKLKVVKLNHFTISGNTYISDEALTKIKYELIKTIE
466196..466414                     PHAGE_Lactob_LF1_NC_019486: Zn finger protein; D0Y49_02325; phage(gi418489415)       5.48e-20            LactobacillusjohnsoniiMGLFHKAPQCPKCKSTNVEPIGRKKKAFSVGKAVAGTVLLGGIGGLAGFAGKNTKKIDMICMDCGKTFKYKS
466555..467808                     PHAGE_Lactob_phiadh_NC_000896: integrase; D0Y49_02330; phage(gi9633001)              4.98e-95            LactobacillusjohnsoniiMVKYYTPQVEPLKNGKFKYSIRYTDPSFVGVHKSSITMTKNTAHARNLAEVKVKKKIKDLLGKVGFKEATFEEVAKLTLEQYAKRGRSYNSVHSLELRFTKILKKFGSRRISSISAVEINRFLNDLLYKENYRNSTVSNYKFNFKLTFTYAKNYGYIKQNPMPDVHIERKNERSYWLYRVKHWYLTDEETRTILDDCTHEGREDFHDFFLWLYLNGMRIGEGGAIKEDNISHDIDGNYFVTINGTLVEHVGKGWIKQPWTKTESGMRTISLPYQAINLYYKHSRNTDWMKLLFNYPTPLKVFRALSFTDLSLNNYHPTAPFKNGYLFTNKLTHNPMTKTTISKCLQRICKRHNIDKQITSHIFRHTYISVLASKGFPLEVIADRVGHKNIGTIQAIYLHVINSEREKYNDLMKHYHF
479157..479168                     attR                                                                                 N/A                 CATAAAAAAAGC

#### region 3 ####
complement(487331..487888)         PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; D0Y49_02440; phage(gi16271776)     1.81e-21            LactobacillusjohnsoniiMKDVKFLDNNENSHYDTAIFAGGCFWCMVAPFDTYPGVIKVESGYTGGVVPNPTYEQVCTRLTGHTEAVRITYDPNKLSYEDLVNIYWQVTDPTDAMGQFQDRGSQYQPVIYYNSPEQKEIAEQSRKSLEDSNKFSDPIVTRIEPAKPFYLAEDYHQDFYKKDPARYALEEAGGREQFIKKHWKK
complement(488117..488461)         PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; D0Y49_02445; phage(gi163932202)     1.91e-79            LactobacillusjohnsoniiMAIDINQGDIIIIGFDPSLGHEQKGNRPALVVSNHDFTRLTRSLVKVVPISTTDNKFPLHIPLPKGLKVYGVAEVQQETTLDLSARKWKKIDHVSGNFLKDVLAAIEESYEQEQ
complement(488493..488768)         PHAGE_Lactob_Lj771_NC_010179: Maz-like protein; D0Y49_02450; phage(gi163932201)      1.17e-58            LactobacillusjohnsoniiMEIVLQKWGNSQGIRLSKAILKDLGITSEKATFEVEIKDKELILKKKKESKLAQRFEGFDYEAYWEKWEREHPGQSKEADWGEPVGKEIKW
complement(488902..489804)         PHAGE_Lactob_Lj771_NC_010179: lysin; D0Y49_02455; phage(gi163932152)                 0.0                 LactobacillusjohnsoniiMLKMVDVYSGSPRSFATQSGTDITMVKATQGTYYINPYCDTDYQAAKKAGKMLGVYHYAGGGDPAVEANYFYKNIKNYIGEAVPALDWEDYQNPKFGKDPNWCRNFVDKFHELSGVWPLIYTGQASLSEAGNCAKNCGLWVAWYATMNWNSWTLPAASFSVAPWPTYTIWQFTGGDMDRNVVNTTREGWKKLAKPNANGKPTSQPVISETKPRPEVKKWTDELGDVWYSEKGTFVTGGAINLRYGARTSSRIIAQLPAGTEVKYDAYSRHDGYVWIRQPRSKGYGYLVCRAGNEAWGTFK
complement(489797..490216)         PHAGE_Lactob_Lj771_NC_010179: putative holin; D0Y49_02460; phage(gi163932151)        1.09e-81            LactobacillusjohnsoniiMSLGQITDLVVVVLSVVVTIIFYFYSKHKIEIDKKALQGDALAKAEQMIARSAGAIVFQTDKEGGSGQEKLVNAFNYLTAILDMAHLPHPSAAYIKGEIEKSVTTMKQTKNAVESMRTITGQYKPVEKIEIEKGEKNNA
complement(490213..490491)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02465; phage(gi163932200)     1.17e-53            LactobacillusjohnsoniiMQDWANLIREIALLISGVVAGITAWNALRKLNHDVSKDDKEELRADRDLYRNRWLASEKAFDEIDAENDKLRKKVKRLENKIDDFKEKEDRK
complement(490502..490834)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02470; phage(gi163932150)     4.65e-66            LactobacillusjohnsoniiMGIVLLVNDSFFYWPPEWQWFFNSDLVDAFAIIVGIGLIVFVFAGGKSQLVNAVLLSCAAFFLMMIVVLQLGHVLVFHDYSRLLSVVAIVGWLLVIQYLAVFSKTVKRRK
complement(490872..491072)         PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; D0Y49_02475; phage(gi90592632)     8.87e-39            LactobacillusjohnsoniiMFDFDFSSIYSNLESLCKSSLDNGCFTNSTIAGFVEQGTFDAAGYKRITGDDYVAGNQTTVANSQT
complement(491072..491572)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02480; phage(gi163932149)     2.72e-99            LactobacillusjohnsoniiMEVENFSKLLNEVVSNGKINFYYYSDPTSSNIELHHLAIPFPGELSPVDLPFRWHAEKPSEDLVDAVWNDETHSWVENSGKSQPALIAKLQANNETIQKKMEIYEQDKIADAEKNDKLVQALTGVQKGQAQTTAVLAQLVPMVQQLSKSVNTSNETEKTKKEEGAE
complement(491608..493938)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02485; phage(gi163932148)     0.0                 LactobacillusjohnsoniiMSEYNKTILTNAGIDLARRANKGAATFQLTRGVSSTENLSEKTIEELQNLTQLPSIQQSVSLSDVVDTTDNPDTVLGIRMTFDNQNLNTGYNVHTVGVYAKEPGKGEILYGVATAKTPEYIPDFREQMLFKFDFLMYLVIGRTDKVTVQVSPDDVYLKKDTYNKAEIDAKVSDAVSKLNDKDAEILKNLNDYKQENKTYHQNLEQQLDTKADKSAVNQQLETKADKATTYTKDEVDNRILPKADKSYVDGELSKKADKTTTYTKDEVNSKIAGQVKSVNGHTADSNGEVTLPKLKATTLISYDVANKSGTLDENAGFDSNGNFSRWPVDQLVIGQLADAINAKLPIEAGAADDDLCHLTSSKISFWNGNGENVKNLPPMSNKQWFFAIRLVGPDGWGSVTVIDQDGTYWLNNKNGDIWTGWKRIANIDEVNSRLPLGGGEMAKGSTILWQGTNAGPNIQEGNIGGLQWNGATDYVKIFGDNNSSDNLDLAIQLGDDNSNRISIRDKDGTERAAITADGQFTGRTNWANVMNTGINNPTLFRHVNGSNTWNDIIGQDNGLAALVSFRDETDGSGNTMGDFSSGIVFGGGDTKGVLNVSYHNPRARIIGGNGTKPVWSKDVAWKDDLKVTVVRDYDVANNHETQHGVENLNAQWLVDQSALSPFAEAINALNTNLSTLRTELMNLKRRVDYNSPQGEFNNTTVNINDLRSTGIYRLANCYIQNGPYPTDNAHWIYVKVTVFDENTVYQTLYEGDNMYGRKSSSPTNWGKWYKYLNQAV
complement(493951..494517)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02490; phage(gi163932147)     2.84e-120           LactobacillusjohnsoniiMNNSNKYELLNYMPDYYQGVYEMEELLKSESLTLKDLEDSHLRTLLNEFVSTADAKGISLFESQLGIVPDENDTLEMRRNKVLMYVLPPRPITIGFFRNLLDNVNLQVKIDVNYGARAVIATAKSAEITSNQIEYLKYLLNVYLPANLLYQIKILLNTAKVSDNLNLGIGNVVKATGIAKASPSQVFN
494201..494212                     attL                                                                                 N/A                 AAATTGACATTA
complement(494507..495658)         PHAGE_Lactob_Lj771_NC_010179: element PBSX protein; D0Y49_02495; phage(gi163932146)     0.0                 LactobacillusjohnsoniiMSPNELIDEFQSKDYDYFLKKMLDAVPDNVDKREGSIIYDALAPAALVMGQQSLDMANVIKETYIKTASGEFLDYRAIEHGTSRYPATQTEAKAKVLNDKKEPLDNVQIGDKFASIGDSPIFYVVTKINSDLTIELTAETAGSSANSYIGQILPVTPNDLLSWAEITEIIAPARDVESDDHLRARLLSSQSWIAYGGNVADYLDMTSNIDEVGAAQIYPTWNGGGTVKVVILNNDLMPASASLVQKVKNTLDPEDKQAEGYGLAPIDHSVTVTAPEKLIVNVDISVKLDDTKVTRYVKDSITKAVEGYFQSLREDWADINQKLGRGYQETIYRSKILSQVMLTEGVVNAKLPSLNGKDADIDLIFNNEKSQLPVVGTVTINEQ
complement(495655..496026)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02500; phage(gi163932199)     1.44e-80            LactobacillusjohnsoniiMDNEENQNPTLTFQIANGRIRNKFDGLGAMVQAVDKILKTERFVFPIYTDQYGNDLNDLLGKDMGYARVEAERMVKEALLADERVIKVEITSIDETSPNTLTLAGECETTYGTIPIESEVSIK
complement(496029..496391)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02505; phage(gi163932198)     3.44e-77            LactobacillusjohnsoniiMAGEQLIKMLTERGGSDSEYSDVVYGRVISTAPLKVQISNSMIIDDNFIVLGKHIGSFSMSGSLTTSEEKKDKDGEKPKIEKTTKPATFTFDNSLKVGDKVTMIRADGGQQFYLFEREGG
complement(496370..497416)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02510; phage(gi163932197)     0.0                 LactobacillusjohnsoniiMITKLQILKHDNGGARIGVEIKDMVKNLKWVTDLNYSAGELTFDIVNGKDPIIPAMGAIVDFAWDNKDIFWGFVFSAECTSDTTVSVKAYDFERYLKSEGSVVFQSGTLGDRYSNVCRRFGVPFNIREQPTYRVPAEVCDGKTGFDMIKSAIDKTYAATGEMYCIVANHMIIELRRAPIPTRTLLVIDTQNTMSDYTYSESIDNAANVVQVVQKNTDNSQTKTATATSDTGDDPATTSFTIASARGNTIKTWGQIVKVVNAKNKANWAQMVQQANDELKKRNVSERKLTLDCIGDTSLIAGAGANVKIKDFGKTWTNCPILKATHNFGTDYTCSLEMKVGTKWQENSL
complement(497413..498102)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02515; phage(gi163932196)     2.23e-150           LactobacillusjohnsoniiMVNMPVNGFGVYITDYSTNRTVELPVNPSELTLKYETDDKSETIVNLGEINRVGNMKLVSVSIESIFPKKRSSWVSSDKLLKPDEYINWLKNIQSNKHHVQLVVSSTQISVTMTISSFEYGFKSGYADEYAYTLGLKQYREVKYHKVNVPAPPKPKPRPAPPKKLGIGSIVIVNGRLRLDSYGSAPGVYENNVRRRITYLAPGHPFPIHVALVNGGPRGWVRQSEVRLA
complement(498095..501508)         PHAGE_Lactob_Lj771_NC_010179: minor tail protein gp26-like protein; D0Y49_02520; phage(gi163932195)     0.0                 LactobacillusjohnsoniiMSTISTTVKINDAFSNPLDRLSSGLQKAQSGMSRLKQAISGGSSGGGSIFKSMVGGTVVGGAINKGMELAGTGIRSMYGELDEASKAWQTFEGNMHQMGKSPAEIAAAKKSMQKFAQQTIYGAADMSSTYSQLAAVGTKNVDQLVRGFGGLAAASSNPQQAMKTLSEQATQMAAKPTVQWADFKLMLEQTPAGISAVAKTMGVSTQQLIKNVQDGKIKTEDFLNAIAKTGTNANFTKMATQFKTVGQAVDGLKETMANKLQGAFDRVGKVGIKFVSDLTDQLSKVNFDGFVDGMFKTFESLEPVFDNLKKGFEDFKKGFSNSGALNSLKDTFESITKAVGKLVRTMSKSKGGDSLFKQLGKLSGGALGGAAKAISGFADALGKLDPGTIQMLAQAFIILKGGLRGLFFEAVVWGLKELNKLDPGTIKDIAKAITALAVAFTMLKAMAKIGGYMKEVSKFFKGFKNAKKIKAPEIETPKVTKPGKILSNAGAYMKLGAAFALVGAGALALGVGFKMLADAATEISNAGGGAIATFFGMIAAIAGLVILVRFLGPALIGGAVGFAIFAAALLLIGVAVLVASAGIALLATQLPTISEYGTSAAVGLLALAGAIAVFGLAAIIGAVGVLLLGVALVALAVGLVAAGVGALIFAVGLALVGITALIAAVGVLLLGVAIALVAVMVIIAAVGMLLFGVALVLVAAMGIVAAVGLLLMSVALMLIMVSAMIAAIGLILLSVALILIAPMALIAAVGLLLLGVALVLVMAMGLVAAVGILLLGVGLVLVAAMAMVAAVGLMMMSVALMMIMVTAMVSAVGLMLLAVALMLVGPMAMIAAIGLMLLAVAAIMLGAGLMVVAAAAMAVAAGLIAVGAAVMIMVSFFIMAGTMMVQAITSAMRNVVSAVRNGISSAVSAARSFGNALVSVGKQLIQGLVNGIKSMIGAAVSAVKSVASKVVSAAKSMLHIGSPSRLFRQYGRWVDQGLIIGLNRDAGAAADASASMAQGVVDAASGMTPTLDPIGLSGINPGDLLADGFNRALGAISDVAGAITGLDGSRANIGIFGQGTVSSDAVNGSVTSSTITPGSVLTSNNTNTQTDNSTQVQIDKGAIVINSTGDPADDVDKLLEELDKRIIENRNKALGGG
complement(501744..502163)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02525; phage(gi163932194)     9.33e-95            LactobacillusjohnsoniiMAESVEDFLFENVGSPVEEKEVKLDRFKSPFKIKSLTADEVSALRKQATKRVLNRKTHKYEQDTDENQFQDLVVAEAVVSPNLNNEKLQTSWGCIAKPEEVLKKMLKVGEYTELSQAIMDLSGLNDDDSSEDLVEEAKN
complement(502176..502646)         PHAGE_Lactob_Lj771_NC_010179: sheath tail protein; D0Y49_02530; phage(gi163932193)     5.75e-109           LactobacillusjohnsoniiMAAIDDFLNGRDTISTKDATLSIKIDGNIIKMIECNKFTAKLEKNKEDVQTLGSHWKRKKTTSVEGTGTLGGYLINSNWIKYGIPYTQDGGDLYFDATLTIHDPTSKAGKQVIQLTDVNLDDIPIADFEADDGVMEWESDFTFEGLNLVQAFNGIN
complement(502658..504013)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02535; phage(gi163932192)     0.0                 LactobacillusjohnsoniiMAGGTWKAQDKRRPGAYINVVGNGQRETTSSLGRVLLVRDKGLGWGKTGVVEVDANADFTKKLGTTLDDPALIALKETLKGASKVLVLNPNKGTAATLTKEGLPWTITANYPGEKGNQITVSVEVSPTDPNTATVSTIFGTKLVDEQAVKFDELDKFTGNDYITAKKVTDSGSRPAAFTNVSGALTGGVTNASDNTEALLNEALENEEYAVVTTAGFEPSSTMNKLVAEAVKRLRESEGRKVRAVIPTDESTAYNYEGISTVVNGYTLGDGTNVDVKDATGFFAGISASADAATSLTYFDVEDAISAYPKLDNEKTIKALDAGQIVFTTRPGQRVVIEQDINSLHKFTAEKPMAFSKNRVMRTLDEIATDTENTFEKVYLGKVGNNANGRDLFKADRIAYLTSLQNRNIIQAFDNTDITVEAGNDVDAIVVNLAVTPVDAMEKLYMTMVVR
complement(504013..504228)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02540; phage(gi163932191)     4.86e-24            LactobacillusjohnsoniiMNIVAEFKKTEVGKIKATVKVEDPKFTKKALILSKKFTPIERDILKLVLDDDKEYTIAEVQKAVENFKEGY
complement(504182..504610)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02545; phage(gi163932190)     6.81e-82            LactobacillusjohnsoniiMNLIDLIAKRLSEIFPDMTIYSERQKSGFEVPSFYISKIMTITKSRFFDIQDRTVSYSLTYFANPDKPNADLDEVEQKLLNNFTKLDDYATVRNRETTINQDDETLVMSFDLLLNMYKVENGRKLERIEYSGGIQEDGSRKN
complement(504607..505041)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02550; phage(gi163932189)     7.89e-94            LactobacillusjohnsoniiMSLDHVDDAQFQQFASRVRQKIDSGYVKQELGKSSKRIGTQSLRILKANTPVKEGNLRKSWTAEGPSYSGGGWTIKLINNAEYASFVESGHRQQPGRYVPAIKKCLVKDWVPGQFYMKKSIPQIQKQMPQLVTKGLWSLKDLFE
complement(505038..505400)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02555; phage(gi163932188)     1.67e-80            LactobacillusjohnsoniiMNYFNGLKNALPRLWNDRVRIVGTQPVKKGYITNNEDVTIVEDEPAKVVLKGQSPSEQSFFGTDGYDAKLIIRNGIKIPAGADIYVTDVNGQETKYKRASKGYSGYFSHQEVAIVRSEKA
complement(505397..505789)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02560; phage(gi163932187)     6.08e-86            LactobacillusjohnsoniiMDKYPRFDEIKKDLADFLPNTDDMPNYDSVLEFTLDKVISDISIYTNIPILELPEALEPTILGLAVQTIDTHQWLVPKDQQVGNVQSLSEGDTSVSFKSPSDIYSALQATNTITDNYVLLLNNFRRLPAE
complement(505798..506874)         PHAGE_Lactob_Lj771_NC_010179: major head protein; D0Y49_02565; phage(gi163932186)     0.0                 LactobacillusjohnsoniiMAINYADKYQKAVIDGFYPDVLYSSALWQSPSNNTINFLDAKHIKVPRLSILSGRQNRDRRTITQPAANYSLDYDVYELTNERYWSTLVDPSDIDESNQLLSIANITRQYNLDSKMPEKDREMFSKLFSQRQAANTAEGLDQNAGIHSETLDATNVLKAYDQMMRNFDRARIPVQGRILYVDTGTYYMLKEAEAVNRTIIVGDQQNINRAVRSLDEVTVVAVPEDLFQTKFDFTNGSKTVVDAKQIKMMLIYNGVQISPEKYDFVGLDAPAAANSGNWLYYEQSYDDILLLKPKFRGVEFFVAEKDGSADSVGRDKTAETDAKPNANNTVEEIKAYLDKAGIDHTGKSKKEELLALVK
complement(506874..507419)         PHAGE_Lactob_Lj771_NC_010179: scaffolding protein SbcC-like protein; D0Y49_02570; phage(gi163932185)     9.50e-119           LactobacillusjohnsoniiMKRKQLEELGLQEEQIKKIMDLNGADIEKAKGEFSDLQAENEALKSQMSERDKDLKKLRSQVKDNEDLTKQFNDLKSKYDKDTSDLTQKLATNRLNSAIDQSLSKANARNNKAVKGLLNMDEIKLDDDGNLTGLDDQIKSLQKSDGYLFDEGSKQDYQPNNGKPANADPVQAMVDIFKGDK
complement(507561..507818)         hypothetical protein; D0Y49_02575                                                    N/A                 LactobacillusjohnsoniiMRNLRFKKEDFQFIKEKYPDLYLKFKNPHEDNDVVNIPMRNDTEYEYYYDIVGDYIADSLDEAGELSEDGLRLESAWDYADWTGN
complement(508270..509304)         PHAGE_Lactob_Lj771_NC_010179: minor head protein; D0Y49_02580; phage(gi163932184)     0.0                 LactobacillusjohnsoniiMKSSDYWRQRAIAEKKKQLKASADYEAAMQSRLRKLEHDIEKEALGYLQRYANENHVGLKQAASVLGNINSTKWSMTLEEFERKAKAGGYEKELNAEYYKSRIFRLQQLHEQIVEFSKKYGMAEQLRMQKGLAKQYQNSYYLDAYNKYRATGQLDIKLNHFNEQQLENIVYRPWKGSDFSKRIWKEYTEVLPDELTDALLRGTLFGYSPSKVVRMMRDRFQKVSERDLHRLVITEMGHAAEEATAQFYKDSDIEQYQYLATLESHTCDQCAHLDERIFNVKDKREGINYPLIHPYCRCTTVPYDKDLPDIETRWSRDPETGKGIYVSGMSFNQWKQTVINRQSEK
complement(509294..510706)         PHAGE_Lactob_Lj771_NC_010179: portal protein; D0Y49_02585; phage(gi169794179)        0.0                 LactobacillusjohnsoniiMELDALKKLIQNTSTSRNDLINNYKQAVNYYENKTDITTRNNGKAELNKEGKKDPLRSADNRIPSNFYQLLVDQEAGYVASVFPDIDVGKDTDNQKILDVLGDDRALTLNGLLVDSSNAGRAWLHYWIDEDNNFRYGIIQPDQITPVYATTLDNKLLGVLRSYKQLDPEVGKYFTVHEYWTDKEAQFFKTSTTNSEIIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFPKNKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGASLKDFMNDLKKYKSIKINNAGNGDKSGVDKLQIDIPVEARDDALKITRDNIFLFGQGIDPANFESSNASGVAIKMLYSHLELKAAKTQTYFEHAINELIRAIMRYLNFSDADKRHISQHWTRTKVEDSLTKAQIVSTVANYSSKEAVAKANPIVDDWQQELKDLAKDREENDPYSNQADELNGKGVNDEE
complement(510697..511920)         PHAGE_Lactob_Lj771_NC_010179: putative phage terminase large subunit B; D0Y49_02590; phage(gi163932181)     5.87e-175           LactobacillusjohnsoniiMALNDLFTKKQQKVLQSYLNDDWKYLFLIGAVRSGKTYISNWMFLLELKRVAKLAKTNNVKRPIYILAGYSSNSINTNIIASIENEFGINIPVDRHGHYHLFDVEIVPAYTGSIRGIGSIRGATAYGALIDEGTLADQGVFQEIINRCSIEGARIVVTSNPDAPTNFIKTEYIDNHDPKARIKVFNFTIFDNTFLSKDYVDALVAATPSGMYTDRTIYGKWVSAEGQIFSDFNIETMTITTDQLPEMVKYYASIDWGFGKGHKGVIQLFGDDENGTSYLIKEWAHEHRFIDYWIDVAKEIKQKYGNIVFWADSARVDYVNQMQANGINCINANKNVLSGLEFVDSYFKQGKLIINKDEADNLLNTIFNYVWDDKKEAPLKEDDDSEDCLRYGIYSEHYEGGGFVPWN
complement(511950..512468)         PHAGE_Lactob_KC5a_NC_007924: putative phage terminase small subunit; D0Y49_02595; phage(gi90592609)     1.78e-105           LactobacillusjohnsoniiMERKLTAKQRLFCDEYIKSGNAKDAALKAGYSAKTAYSIGNENLNKPELKSYIDAKMAEIESHKIADAKEVLEFYTKVLRDEVVEEVPMSTADDVVVIKKKPSFKDKITASKEIMKRYPLVDPIEKQKLQKLIADTRISEAKATVAERLGNESDDKLDELMDKLIKASEKSQ
complement(512590..512661)         tRNA                                                                                 N/A                 AGCGATATAGCTTAAATGGTTAGAGCAGGTCGTGACAACGGCTGTGGGGTGGTTCGATTCCACATTTCGCTA
complement(512700..512773)         tRNA                                                                                 N/A                 GGTAACTTAGCTCGGTTGGGAGACTATTGGCATAAAGTACCAAGTTAGTGATGGTTCGATCCCATCAGTTGCCA
complement(513544..514047)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02605; phage(gi163932177)     3.14e-113           LactobacillusjohnsoniiMYQINLGLQPNPRATARKVDKFLTTDFQRYLNLAGLHRNQLTSPQLSFAPGSTNKNSVEKNFIDEAQDDIDIADPARKVCAAIYKTMDNCTDTAFKPHRRILIGTYIDQLRIVDVAANVSLSTRSIDNKKINAQCEFADRWLYWKKYFDVEGLPDLRVFAERIKTVW
complement(514217..514441)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02610; phage(gi163932176)     2.55e-30            LactobacillusjohnsoniiMKLYDLEVNPYTYKNFKTEQLKNFQSMLKSNIRNFKDIDNPTLEDMELEYRAEELLPLIEHEIKVRSKDGRDQK
complement(514443..514727)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02615; phage(gi163932175)     7.29e-24            LactobacillusjohnsoniiMEIKLEIGTRGTREEFEDTYTEEFLKDKGLKVLPSGRLDLFLKPWAVHTKVGWMCSFSKYDVLTYMGKGIWDLRIYKPSEEEKELLEDIDGIEF
complement(514915..515139)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02620; phage(gi163932174)     1.84e-15            LactobacillusjohnsoniiMNMIDLSLPSKFIDASVDEDFDKALKIAKLIAKQHHITLTDELEILSDSAAMALSIDEMTAVFSMVEDIRNYEA
complement(515135..515596)         PHAGE_Lactob_Lj771_NC_010179: holliday junction resolvase; D0Y49_02625; phage(gi163932172)     9.88e-101           LactobacillusjohnsoniiMRVEFTIEGPPVGKARPRVTRTVTYTPAKTARYEDLVRYTAINSFKGVFDKDEPLDVKIIAYFEIPKNLSKKRKALCLANQELPTKKPDIDNVSKIIMDGMNPKMKRNKQLHKMVEVMRGIYHDDKQVTTLVVKKRYAERARVEVRVKRDMGD
complement(515667..515969)         hypothetical protein; D0Y49_02630                                                    N/A                 LactobacillusjohnsoniiMKIKSIIETTNNRHEVLDDIDTIFNKMNEPYFFADTLYSRDKNSYSYCFSNALICAEINESAKAIGSEIEYIVDHMPVIFNTNQIIKVYPVDQKVPGVEE
complement(515959..516171)         PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; D0Y49_02635; phage(gi9633029)     1.14e-39            LactobacillusjohnsoniiMTKQQEKCPYCQGVKRIRDDLVNYTFRHILQIQNGDELWSTVITNKNEYRTMAYIEYCPKCGRKLAENEN
complement(516164..516403)         hypothetical protein; D0Y49_02640                                                    N/A                 LactobacillusjohnsoniiMITRNQKDCPYCHHETRKKHYVLLTCHYYANDDNYVEATVNINSNDKTMSLIVGDYYGDDTDEIKINYCPMCGRELSDD
complement(516548..516811)         hypothetical protein; D0Y49_02645                                                    N/A                 LactobacillusjohnsoniiMKRFKMPKLGNNVVLRNKKSADLKEVKLVEVEDEYFYAIELATGKSLKDKSDTVVGESIPDLLGCLQDTYEIYLEDDSVAEDKLTND
complement(516815..517024)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02650; phage(gi163932165)     1.51e-41            LactobacillusjohnsoniiMLKENHDLEKIIEDAKEYRWYSIPDMYMVEILDTTGRSAGFVQSIFIDKKEASEVAKALHGVVKEVVGG
complement(517039..517224)         PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; D0Y49_02655; phage(gi90592592)     3.86e-23            LactobacillusjohnsoniiMSEIENVKNGLTYLLDINDLATSVTVTEGGESHTMNLKDLKVTNTDVLLQIADLLGIDINN
complement(517238..518080)         PHAGE_Lactob_Lj965_NC_005355: putative antirepressor; D0Y49_02660; phage(gi41179234)     0.0                 LactobacillusjohnsoniiMKMNNELQLFDFENNQIRVLKINNEPWFVGKDVAIILGYSNTRKALIDHVDDEDKKDGVTIRDSMGRSQLAVVINESGMYSLILSSKLPNAKKFKRWVTSEVLPAIREDGAYITDNKAMQLMSDPQELGNFLLTIGNRVKALEAEKKELKDTNAKQAAKIARDADDVVFAKAIRYSHHAIPVGELAEILTQNGFVIGRNQLFQLLREEKYLSSFNHSWNVPMTQMVKRGLFRITHNLTRDGRGYSQTWVTPKGQKHIINKALRGKFDDTYQKVMVSTLNV
complement(518142..518495)         PHAGE_Lactob_KC5a_NC_007924: putative transcriptional regulator; D0Y49_02665; phage(gi90592588)     2.80e-61            LactobacillusjohnsoniiMQNRIKEIRQEKKLSQKDLAKKLNISQQAISLYEKGDRELKLETWQKLADFFNVPVDYLLGISKDRSTLTIDDLNPEEQEAYERITDMLSQEYPQTRPEFNWSKIGQLLINSDLTEE
complement(518509..518826)         PHAGE_Lactob_phiAQ113_NC_019782: putative transcriptional regulator; D0Y49_02670; phage(gi446730276)     2.30e-23            LactobacillusjohnsoniiMKNRLREVRNKTNLTLSSYSRMIGIPSNTLSQYETGKREPRLETWEKLANFWEVSVPYLQGLDQIWYQAECLECHKVFRISSQDADKVKCCPFCKKFYLAISKAS
complement(518832..519767)         PHAGE_Lactob_Lj771_NC_010179: DNA replication protein; D0Y49_02675; phage(gi163932162)     0.0                 LactobacillusjohnsoniiMGRRMFSDKVVETDKFLDMPVSTQNLYFHLCMHADDDGFLGNPKTITRSIGGQQDDLTHLIEKGYVIVFEDGTVAITDWFVHNYIPKDRYHKTVYQDNKKKLELSETKQYRLVTRSSIVQDTKSKQDVYNMDTACIQDVNEVYTEDKLSKDKLSKDNNIDKLSSSEPNSDPEPEQKSQKIPYEKIIDYLNRKTNSHYRPTSKATKRLIKARYNEGFTDADFKTVIDKKCTEWLQDANMAQYLRPETLFGTKFEAYLNQPDTGPIPRRNFGNKPVRKVTDWGQVQQQLQQQSQTVPQMTQEERNAIFREYGR
complement(519788..520612)         PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; D0Y49_02680; phage(gi971848898)     1.13e-177           LactobacillusjohnsoniiMTEKKKSVYETLAKVDVKPLLEKKGNLNYLSWAKAWGLVKSLYPDATYQIKEFPEYVLTKEGWLATGRNLDYRQTSAGTEVEVAVTIDEQNYSSKLYVMDYRNKVIAKPTYFEINKTQMRCLVKALAFAGLGLDVYAGEDLPEQPQQKQVTNKPAQKPVRRQSILSKPKKMTRDQLYEYQADYNGKNKFLVTIYTECDKQKKMGLDAKTSVPIEWWHEKLKENSADGEAVRQFTEMAIAANKKEQAKAKIEQSNGIPDYAKDPEIESEIEKALS
complement(520617..520895)         PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; D0Y49_02685; phage(gi971848897)     1.09e-50            LactobacillusjohnsoniiMASKHAEFEKEYKTWQYKLEKEASDWTKAIIAESLKQGTYQQAINWINSLKPRIDDSFPGGSVGAEINYLREIAEDARQAVLKQALSQKPKE
complement(520895..521221)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02690; phage(gi163932159)     1.65e-46            LactobacillusjohnsoniiMIEIMTREQAKTFREQQLLKEQRKLAEQGISSAFEGKFLVTIGDSSCDYYNFKHFITTQIFGMGIDNFVQKTDWDKKEVIEYLATVDQDDDLWEEQVMDYFGGMEGNY
complement(521562..521777)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02695; phage(gi163932158)     4.33e-46            LactobacillusjohnsoniiMEQILTPKQVQEKYSWSYMTWYRRRSDCLVSPFKDAIIIESKRQCRIKAKRFAQFLDWRSEQQYKEQFGLS
complement(521789..521998)         hypothetical protein; D0Y49_02700                                                    N/A                 LactobacillusjohnsoniiMKIEFIKDEMTQTVKVKVNKENYGELIFDTDQDAWVLWPKQIDDGVTYFADLQETMDQIKYELEHADEN
complement(522025..522249)         PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02705; phage(gi163932157)     3.72e-47            LactobacillusjohnsoniiMPSLTKENSAQILDQYLKEHGIKKSYLAKKMNMSPSNLTGYLNGTLRFTAEFAFGVADALNISPSIFLNKSYKI
522413..522769                     PHAGE_Lactob_Lj771_NC_010179: cl repressor; D0Y49_02710; phage(gi163932156)          2.86e-67            LactobacillusjohnsoniiMTDFSDKLKQLREGKGWSKTNVAKHLGIGLSTYANWEYGISEPDIQTINQIATLYDVSNGYLMGNDNSGNEENETKSVDLEKDPVVLSYGGRPVSDEDMDIIKAILERHKNDGDVHYE
522766..523224                     PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; D0Y49_02715; phage(gi163932155)     7.75e-107           LactobacillusjohnsoniiMTMYNNDLLLYICHLIEDHNLGVILSRLDDRHFRSRYLPQKKLIIINTNWWNPPEVPFMAAHELGHCINGDKGVMYYAHDYDWQEHDAFNRNDDAFKEDQADLYGLNLIWDYASSQGYTCEDPGEFMLQFGIPERMKKVVAKKFESNNDLLF
523233..523970                     PHAGE_Strept_SMP_NC_008721: hypothetical protein; D0Y49_02720; phage(gi119953754)     2.23e-22            LactobacillusjohnsoniiMFTIILIVIIVFLFFYILGSKSASSNNEANSISHSENDDDKYSEYFRVTNSRPKFNDYYGRDMDYPKYNDKYDTGTEFKLRQLLLLVWFSRTKKGRLVTTSIPQYFYYDYNINGNKLLQHFIARGWIIEDDERYILSDEGKKVAKQYAALWELHRNNQFPFCLDEDYPNWNDGDLLKEYYKKEINYLKAEINYTKKIITFYEKTSSFFTSKEEQEHEIQAEKADIERLTNQINKDQDKISLEVQY
524019..524546                     hypothetical protein; D0Y49_02725                                                    N/A                 LactobacillusjohnsoniiMKRSMRSIATVFSLLSIGLSLTACSNSSKDQDTYKQSVSARRESLRKSREEKSSSENEQIKKANNQLVQDLKGNQDDANNGNHNYDYSTYVEKIDIKSDTQAYVYVDESFMNLDDVAKTKVGNSISNLVLRSMATSGMDIQPEDQKRGIYLAFYTGGNKALGHSRFTNYNEYKFY
524296..524307                     attR                                                                                 N/A                 AAATTGACATTA
524617..525807                     PHAGE_Lactob_Lj771_NC_010179: integrase XerC-like protein; D0Y49_02730; phage(gi163932153)     0.0                 LactobacillusjohnsoniiMTTKEYSMNCVPLKNGKFQYRQRYADPLLSTPKKTVFKYACVTLNKDTKQAQNKAREILTQKIAKKLHGASLSSQITFGQIADDYKNTAKKRLAYTTYYSKSGSLNKIRALIGENTLAANLSTQYFNRFFDNLLYRDKPLSNATVTSYKSIINQCYEEAVRHGLLSTNPIRDVKINYRSEVQKRRNEIEKKYFEESELTVIFDDIRKVNRPDIADILEFQVKTGMRIGEASALQVKNIVKHGDNYYARVTGDLYQVRKPKPGTKAIRKSKGAKNATSNRDVLLSPSAQKIAIRLIKNKKANDYIFKNNRSPQGFFKPTKLDLFLKGVKKRTKIDKIFTTHTFRHSYISILAQKGVPLQIIQQQTGHSNSRVISQIYLHITKKAQQDFANKLKEINF
complement(525899..525982)         peptide-methionine (S)-S-oxide reductase; D0Y49_02735                                N/A                 LactobacillusjohnsoniiMKDIKSLDNNEKSQYDKAIFAGGCFWCM
complement(526123..526319)         hypothetical protein; D0Y49_02740                                                    N/A                 LactobacillusjohnsoniiMVKLTEARKKLIKNGMKIIKIERTTLNDPLQKTLFLSLLKNIKPKVIRKEKQSRKASYFAG
complement(526604..527365)         PHAGE_Staphy_GH15_NC_019448: putative lipase/acylhydrolase domain-containing protein; D0Y49_02745; phage(gi418487944)     3.38e-07            LactobacillusjohnsoniiMNLIQVFDNLKVPEENIPELLEFAGQHEDFLTKIVKASGNQVEYNVSGTQSTNSKLVDKQIAFLGSSVTYGAGALSESFVDYLRKKDGIYPFKEAVSGTTLAENGDDSYVARLEKLPILENISAFVLQLSTNDAKADIPLGKISENDKYDITTSIGAIEFILEYVKKTWNCPVLIYSNPFFDSKKYGELVEATKELQKKWKFKFLNMWDDKHFNYSENERQLYMVDDIHPTRAGYKLSWLPEFEKALTDIYEN
complement(527370..527798)         PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; D0Y49_02750; phage(gi16271776)     5.16e-48            LactobacillusjohnsoniiMFDKKEALKKLNSEQYEVTQHAATEMPFSGKYNDFNQKGIYVDVVSGEPLFSSQDKYDAGCGWPSFTKPIKKLRYKRDQSHGMERTEVKSPIADSHLGHVFTDGPIDQGGLRYCINSASLKFIPYDKLEEEGYNQYKKIFEE

#### region 4 ####
complement(605875..607277)         PROPHAGE_Escher_MG1655: IS150 transposase B; D0Y49_03085; phage(gi16131429)          1.11e-55            LactobacillusjohnsoniiMTKYSTELKIEIVSKYLNHEDSIKGLAKQYNIHWTLIRRWIDKAKCQGLAALSVKHTKTTYSSDFRLNVVRYYLTHSIGVSKVAAKFNISDSQVYNWAKKFNEEGYAGLLPKQKGRPRKVPKKSKKTTKKLELSEKQKYEEKILKQEAELERLRVENLGLKKSGCPISTLSNKQKTQLIQDIRAKHHQIKLKVLFKVLKLNRKTYYDNVKNRINQADKYALVKEKIQEIYYGYEGQETYGYRPMWGALRDEGFKLSLETVRKLMRSLGIKTTIYHKNTGKYSSYKGNVGKKAPNILNQTFDETIPYKVLHTDVTEYKLTSGKKVYISPVVDEASLEILACAVSYSPEMKTIYNMLDELADNLPPGAAPILHSDQGFQYQNPGYQARLKKMNIIQSMSRKGNCHDNAPGETIFNLMKREKLNRLKIGSLEEMKEILKDYIYWFNNVRRSNKLKYTTPVKYRNRVLSNL
complement(607348..609141)         PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; D0Y49_03090; phage(gi9630145)        1.18e-26            LactobacillusjohnsoniiMDNNEESKSVWSKAIPFKEQVQIFKRVLKYVKPFKVEMGIAIFGAFLVSVINMLLPRGLQFFLDNYLIKQKATVQIIIWAGLLYGLGTIIKAILQFVYQYLYALGAEKTLESVRKDLYRKLHSLGMRYFDQTPAGSIVSRVTNDTMTLSDFLGVLCQVVIGVFSLVTAFIAMYVTNKFAALIVLLFLPILGFIFWIYTQKSSRLYRAFRERLSRINTNLNESIEGVSLIQQFKQEKRMTNHFENENGTLMRTRFNLIRVNSLLLSPMTSLLYSLALALVLMYFGFPLQKTFVPAGIVYAFSQYVQQFFNPISTMMDRMTSFQDGIVAGKRIFRIMDEKEYEPRQENDERAVISKGKIEFKNVNFSYDGENEILHDVSFVVNPGETLGIVGHTGSGKSSIINVMMRFYEFGSGEVLIDGIDIRKFPKKELRKKLGLVLQEPFMFYGDISSNIRLYNDKITDQQIKDAAKTVQADSFIEKMPGKYHAKVIEGGSELSQGQRQLISFARTLVTDPKILVLDEATANVDTETENLIQEGLKKLRQGRTTLAIAHRLSTIADADQIIVLDKGRIVERGTHEELLKKKGYYYNLYKLQQNSDK
complement(609131..610897)         PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; D0Y49_03095; phage(gi9630145)        1.25e-19            LactobacillusjohnsoniiMNIFSKLGWFFKQEKKRYIIGISFLALTSIANLVPPRILGLMADQLDKGSISWGEYGALVLAVIAAAIVLYLLRYFWRKQIWGGAAELERQMRSRLFKHFMIMDKTFYQRHRTGDLMAHVTNDINSIQNVAGDGVLTLVDSLVTGGTTMIAMIIFTDFRLTIIALLPLPFLALSAWKLGAKLHYSFDKSQAAFSRLNNKTQESVSGIKVLKAFGESEQDSASFNKMVDDTIQINKKVFKWDSMFDPLGTLIIGATYVITIIYGGLLVSNRTLSVGQLVSFIAYISNMVWPMFAIGYLFNILERGSASYDRVERLLYEKPQITDENADQSLTTTDIQGDLKYEIKSFAYPDEKEIPVLQNINFTLKPGQTLGLVGKVGSGKTTIIELLLREFDQYQGRISLGGHDIRNIPLKLLLSEISYVPQNNFLFSTSIEKNIAFSDENVEKDKIESAAQKSDLHDDILQMPVGYKTLVGENGVSLSGGQKQRLSIARALLKESPILILDDALSAVDAKTETSILDSLKSERKGKKTLIAAHRLTSVMDADLILVLKEGKIVERGKHADLLAQNGWYAEMWRKQELQAKVGEVDGQ
complement(610974..611195)         YneF family protein; D0Y49_03100                                                     N/A                 LactobacillusjohnsoniiMNLGLAIFLIIIALLIGLVGGFYGARAYMKKYFQDNPPISEDMIAAMMAQMGQKPSAKKLNQVMNMMKHQQQK
complement(611268..611516)         DUF896 domain-containing protein; D0Y49_03105                                        N/A                 LactobacillusjohnsoniiMDKKEEEKLIKRINELTKISRERELTPDELEERKKLRSAFLENFRAGFRQQLEDTVVIDKDGKEVTSEKAKEAQRRKGLRKD
611654..612277                     PHAGE_Lactob_phiJB_NC_022775: transcriptional regulators; D0Y49_03110; phage(gi571797861)     2.75e-11            LactobacillusjohnsoniiMTEPHANKQLEILRFIYDTVEERAFPPTVREICSAVDLSSTSTVHGHLARLEKKGYILKDATKPRAIEVTEKGREALGIKPKDIPVVGVVTAGQPILAVQDIDEYFPLPPDLENDAGELFMLRVHGESMINAGILNGDHVIVRKQSNANNGEIVVAMTEDNEATVKRFFKEDGYYRLQPENDTMDPIILPVVQILGKVVGLYRNNID
complement(612314..612952)         PHAGE_Bacill_SP_15_NC_031245: baseplate hub subunit; D0Y49_03115; phage(gi100101)     6.42e-09            LactobacillusjohnsoniiMKYPDKLLAEVKERSKGMKLEGINFGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRPYSIKHTFSKKENKEVINYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLDDKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQDWLNVKPLIK
complement(612936..613355)         PHAGE_Yersin_vB_YenM_TG1_NC_028820: NUDIX family hydrolase; D0Y49_03120; phage(gi971746323)     1.20e-07            LactobacillusjohnsoniiMHEYSAGSIVYRIKNNKIEFLLVQSRLNRTWGFPKGHLEKDENNVQAAQREVYEEVGLKPDYDFDFEESITYKIARDRLKTVTLFLSRFNPDQKIELQKSEIGDYKWATLAEANSCLNYEELKELLKKAQEYIENEISR

#### region 5 ####
1654072..1654084                   attL                                                                                 N/A                 GTCGTTTTTTGTT
1661277..1662452                   PROPHAGE_Oceano_HTE831: integrase; D0Y49_08410; phage(gi23097608)                    4.30e-49            LactobacillusjohnsoniiMKTRMKEIKEYQTAKGKIRYKTNIYLGRDEKGKPLQYRKSFKTYKEAEKACIKVLDQLENGTYWNLSQNITFKEMYAKWLKIYQLGTIKESTLATTERMIEKHVLPILGDMVLNKITVEQCQNAVFKWKNDAPKTFGKYARYTKKIFNEAKRLDYIEKSPMDKVIIPPVDCEPFKSSFYERDELKRYLEVARIYKKEAYAFFFLAGTTGLRCGELRALKWSDINLDQGYLYVNRTYTVGLNNRNYIDSPKTKSSARMVSLPFQTVELLKEWRVFQQKETKVFSLVADRLVFNGYKNMRPSYDVPISTTTLDRWNVEIAKKAGLDHIRVHDFRGTYASLMVSSRVDTNHLKEEMGHANIKTTMDRYAKTTNDLRKADTEKFESYLPFDAQSL
1662688..1663008                   DUF898 family protein; D0Y49_08415                                                   N/A                 LactobacillusjohnsoniiMETKHGRNSFFDGGLISFIGWHILGTLITVCTLGICYPWAVCMIYGWEINHTVIEGHRMKFTGSAFGLFGNWIKWLLLTIITVGIYGFWVGIKIRDWKAKNTIFVN
complement(1663070..1664056)       gfo/Idh/MocA family oxidoreductase; D0Y49_08420                                      N/A                 LactobacillusjohnsoniiMKKYNWGIIGTGWIAHEMADALQASKGEVYAAANPNEDELKKFAAEKRVKHTFTNPDEMINNPNIQIIYIATPHTFHYDYIKKALNADKHVLCEKAITVNADQFDEVEKLAREKNLILSEGFTLYHMPIYQKIRNLVDKGKLGKIKLVQVNFGSLKDYDPSNRFFNKALAGGALLDIGGYATAFARMFLSKQPESILTTVKFFETGVDEQSGIILKNTHAEMAVMALSMRAKQPKRGVISGTKGYIEISNYPRATEAQITYTASTHEESHETIKAGKTSEALEYEIQDMERYIEQGHDDGELSISRDVAHILTSVRTSWGMKYPFDEK
complement(1664062..1664727)       ribose-5-phosphate isomerase A; D0Y49_08425                                          N/A                 LactobacillusjohnsoniiMSLISQKALSKIKPNMSISLGGGSNVLNLAKDLCQAHISNLTLYSSSEITQAKCKQFGLKVLPFSENSPHLDLAFDGCDSIDKNFNALKSGGGIHLFEKLAAENTEEYILLLPAERFRDELSPTIPLCLEVVPACLENVINSIPEEYDYKIRLGKAVASFARSPLGNILIDIYPHTSWNNIKKLNSFLLKQNGVVSSSYFEGIVTSIITETKNKAVEIKKG
1664880..1665719                   MurR/RpiR family transcriptional regulator; D0Y49_08430                              N/A                 LactobacillusjohnsoniiMENIIDKIYVQMNKMSASDQKIGRAILENPVEVINITISQLAKKAKVSDASITRFCRNLSLSGFHELKILLAQSMGQKESESLRELPKDDIQAALAQIEKNKINEIQSTLGHIPTDQLEQILSLIEKSRIVQISAEGDTYPVAADAVYKFNQIGILSFASGGNVETADAQTMNLNNKDCLIVISNSGESAALIKEIELAKKNKLKIIGITNNPDSPIALNSDYHLRTGVRQTVLQNQYYFSRVAAFTIIEALFLLLIKRDEKRIEKIKQHEKIVSSQKI
1665792..1666700                   L-lactate dehydrogenase; D0Y49_08435                                                 N/A                 LactobacillusjohnsoniiMRNVAVIGMGHVGATVAFTLFTHGIVDNLYLLDKNQAKAEAEYNDLRDTLARNDYHVNVFLGDYSDLKDVDIIVTSFGNIAATVKTGDRFGEFEINSKNAKEVGAKIKESGFKGILINISNPCDAISTILQETTGLSKKQVFGTGTFLDTARMQRIVGEALNEDPRNVAGFVLGEHGASQFTAWSTVSVNGKSAKELFTKEQEEKLSAQPNKNSMKVAFGKGYTSYAIATCAVRLIQAVFSDARLFAPTSVYLDEVQTYIGYPAIIGKDGVEKVIPLELTSEEDEKLRESADIIKKHIAQLK
1666789..1666870                   tRNA                                                                                 N/A                 GGAGGCCTAGCGAAGTGGCTAAACGCGGCGGTCTGTAAAACCGCTCTCTCTGAGTTCGGTGGTTCGAATCCACTGGCCTCCA
1666926..1666997                   tRNA                                                                                 N/A                 TGGGTTATAGCCAAGTGGTAAGGCAATGGTTTTTGGTACCATCATGCGCTGGTTCGAATCCAGCTAACCCAA
complement(1667067..1667369)       rhodanese-like domain-containing protein; D0Y49_08450                                N/A                 LactobacillusjohnsoniiMINITTNQLAEILEKDSNINLYDLRTPIEFASGHIPQSHNLPFEELKYFNDPKNETYYFICRSGDLSHHVCQLLKSKGYNNLINISDGILNWKGKIQSIN
1667462..1668583                   hypothetical protein; D0Y49_08455                                                    N/A                 LactobacillusjohnsoniiMARLVKVSGRGDGTTWESALKDLQPDDVLLLAPGFYELDRGLEVNNVTIKGTGNTPDETVISGFFVLENNCNFFTLENIALQTKSGHNTIYVEDDADTYLTLRNTTLYGDEDDMAAIAVNGKCTLELFSSKILNSSVSLFAQADFRLTMTDSLIDYDSENYAALGIQGKGTAIISNSMIHGNLSTYPNSNAEVDLNNTSISYGLIHGQTWVNMLNSTVEKNDDSSFYISDDSWVNILQSEFKGGIFLDKNTRTLIQNSKIDRLIACDNAKVTLNNSTIVSHADFQDKATADATRVAFSGRDDFEYFLALNGQATLGGRDLIINPNGSRLAVQDDAKIKLNIVSSSTQDLEVECNRRPNINILGMRWEAKKNND
1668638..1669339                   PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; D0Y49_08460; phage(gi410491962)     7.24e-06            LactobacillusjohnsoniiMQEPMYIKIHNQIKRDIENKKYKVGERIPAERQLASKFNVSRMTLRQAIKTLEDEGILERRLGSGTYVSSQKVQEKMSGIMSFTDITRSNGQVPSSKLLSYRITKPSLSEKEKLKIQDTDNVLRMERVRFADNVPICYEVATIPYELVSRFSKDEISSSLYQTLEEKGGYKIGSVVENIGAAVANENEARLLSVKKGEPLVTRRQVTELSNHYPFEYVRASYVAERFEFTFEK
complement(1669392..1669778)       PHAGE_Strept_Samisti12_NC_042012: membrane-associated initiation of head vertex; D0Y49_08465; phage(gi100034)     8.87e-19            LactobacillusjohnsoniiMKKIITYGTFDLLHYGHIRLLKRARALGDYLIVGLSTDEFNEFSKHKQAYNSYAERKYILEAIRYVDKVIPEENWDQKINDVQKYDIDTFVMGNDWEGKFDFLKPYCKVEYLERTPGISTTQIKKDLK
1669921..1670661                   glycosyltransferase; D0Y49_08470                                                     N/A                 LactobacillusjohnsoniiMSRVNILEIEFDNYSLEEFKDRLISRLNNKLSTMVVTANPEIVMAANKDPKFMNLITKNADLITPDGIGIVLGGKMLKKPLKERVTGYDLFTWLLQVGNLRKLRVYLIGAKPEVMRITKEKIARDYPEIELVGAEDGYFKDDLKTVAKRIEESSPDMVFAAIGFPRQEELISILRQAKVPAIMMGVGGSFDVFSGVVKRAPEVFQKTHLEWFYRLITNPTRFKRMLALPEFVVEVEKSKKENKRKN
1670666..1671781                   glycosyltransferase family 4 protein; D0Y49_08475                                    N/A                 LactobacillusjohnsoniiMKVLHINAGLEKGGGLSHIVNLLTEAKRQNVDFELLTLADGPVAKAAKKAKIKTTILGTQSRYDLSVLKRLTRLINEGNFDIVHTHGARANLFVSMIKKQIKAKWIITVHSDPLKDFEGRGMIGNIFTKLNIMALKKADGIFAITQNFSNLLVEKVGIPKTKICVIYNGIFFHQNKNVPKKYTHPYFNIINVGRAEKVKGQDLLLKAIKKLNDQNIRLHIVGDGSELNNLRALARDLGISSQVTFHGFLTQQETRKLYQKMDLAVLTSYSESFPLVLLEASDNLVPILSTDVGDIEKMIPNEEYGFVAKIGDIDSISEKIRQATAKSKTDLMAMAEKEKTYLMHAFSMKNQLVAIENYYKLVLGENSGKLS
1671765..1673759                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; D0Y49_08480; phage(gi30043988)     5.89e-06            LactobacillusjohnsoniiMGNYHKSNILAILIGILPLIFEFSSNIWKGDNGFFIVSAAYGLILLLLALSIPIEDLDQWFLEKTLSLLSVFLALAVVLNNLDIFPLSEIGALYQLTIISYMGILYFLDRHFNAKNLVLLLLNLNILAQLPIKAGTLLILIISVLTFVFYLIRVVVTFSEQLRPFLLCVYLIVLLISLVWYVPELPDFVLKNLSWSIGSIILLIEIIGSIFYLKVKDHLRPTSHLIVGIIIFLIINEISMLVAESNVLNTSYLVLIFILSLSIVNIFGNISLGKKQVKISVLIPAYNSAKTIVEALESIKNQTYQNWEIILINDGSQDETETILRRYLGNTKLPLKYTKQTHHNYFKAIRHGLKYASGEIIFVLDADKILFNQNVFYRAVSTILGEKCDGMFVGIRAMYQRLKDGKFHLVRPYYRNEVSLIKTALGLGTNIYTNYAFWRREIFETSVYENYLINGMPAWYNAENNLGLRVVNGNFVGLKYRVSKKVNLGDNPLKQNNSKTLFELSTNLRTLHHIVSRINVPAYSTQATLYNLINRLHIASLYPSIFKQGQTSLKEITPLVVKNIKDSELDNVYLKTIVDFSNNFNPQKTAKIVIPKGTKIYWGTGIDEFSNKLSKNTLEQFYYDLIKIISQGTTIYKIKKDDQKKLEQILEFFTIRDYVKIISN
1673824..1674351                   PHAGE_Bacter_Diva_NC_028788: transposase; D0Y49_08485; phage(gi971743568)            1.21e-10            LactobacillusjohnsoniiMSKYTVETKLKAIELYKKGLGSRQIQCKLNIPSHSTIDRWIILFKKYGKAGLITKRTRKKYSGQFKLEVLNWRKEHNESYQATALKYGISNTGIIANWQRAYKEGGIDALFIKQGRPTMHKKAKHKKLNKSELSELERLRLENRALHVEVEYLKKLDALVQKRGHLKKKDESSQN
1674276..1675214                   PHAGE_Bacter_Diva_NC_028788: transposase; D0Y49_08490; phage(gi971743567)            3.11e-27            LactobacillusjohnsoniiMLKKIRCLSSEARTFEEERRIITELRQEYKFSLKEILPFTSLSKSTYEYKSHPKVKKLSDKKLLSLITAIKKRNSGYGYWTVTDALKRTYNLIINHKRVYRLMKEHNLLAKKYNRRAGKYDSSKGPQNKKAKNRLHQKFITDRPYQKVVTDISEFCYGNRTINDRVYLSPFKDLCSGEIISYTITDRPLTKYVIQGLREVFKARPKLRYRMTVHSDQGIQYQSNTYRHELRKHNVFQSMSRRATCHDNAAMESFFHTMKVEIDYYTHHFKTKKELIKRMESWIKYYNQERIRHKKKSLTPIEYRNQALKEFI
1675343..1676815                   PHAGE_Bacill_G_NC_023719: gp277; D0Y49_08495; phage(gi593777733)                     3.92e-133           LactobacillusjohnsoniiMFYPQVDQDDSLILHTDLYEINMMYTYFKKGISERNSVFEVFFRKEPFGNGYAVNAGLSHVIQYLNNLRFKESDLEYLKETCDYDDDFIDYLRNLELKLTIRSAREGELVFANEPIMQIEGPLAQAQLVETAILNIINFQTLIATKAARIKVAVGNDGLMEFGSRRAQETDAAIWGTRAAYIGGFDATSNVRAGKLFDIPVAGTHAHSLVEAFNNEYDAFKAYAETHKGCVFLVDTYDTLRSGVPTAIKVAKEMGDKINFQGVRIDSGDMAYISKKVRKQLDDAGFLDAKIYASNDLDEKTIQNLKMQGAKIDVWGIGTKLITAFDQPALGGVYKLVAIEDKEGNMRDTLKISSNAEKVSTPGKKQVWRIQANSEKKNEGDWVSRYDEDPRKFDALFMFHPQYAYINKVVTDYTARPLLQEIFHEGKLVYKEPTLKETKEFAANNLDGLWDEYKRSLNPQDYPVDLSQKLYDNKMNLINDIRSRIVKRGY
1687861..1687873                   attR                                                                                 N/A                 GTCGTTTTTTGTT
