gi|00000000|ref|CP031904.1|  Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, 75669, gc%: 47.23%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
13163..13174                       attL                                                                                 N/A                 GCGTTCAGGTCA
24334..25080                       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; C8200_28480; phage(gi17975752)     2.38e-05            EscherichiacoliO104H4MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHANIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVSCAGKSLPRFWPGDFFPVFYACHLAVLGVLAL
25135..25695                       PHAGE_Sinorh_phiM9_NC_028676: putative ProQ/FINO family protein; C8200_28485; phage(gi966199408)     2.35e-05            EscherichiacoliO104H4MTEQKRPVLTLKRKTEGETPVRRRKTIINVTTPPKWKVKKQKLAEKAAREAELAAKKAQARQGLSIYLNLPSLDEAVNTLKPWWPGLFDGDTPQLLACGIRDVLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAARLDKIRRQNRIKAELQAVLYEK
25921..26358                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; C8200_28490; phage(gi209447151)     6.89e-12            EscherichiacoliO104H4MMDKPTDWRFGTRRIFSNEFKLHMVELASKPNANVAQLAREHGVDNNLIFKWLRLWQREGRISRRMPPTIVGPTVSQSFPASPTLVPVELIDTPRCATDAPAPEALSVACAASCHVEFHYGKMMLENPSPELLTVLIRELTGRGR
26355..26705                       PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28495; phage(gi209447152)            1.17e-50            EscherichiacoliO104H4MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPAVRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML
26736..28346                       PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28500; phage(gi209447153)            0.0                 EscherichiacoliO104H4MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSRPLLTSLYKLMQEKEHTLSKKCRLGDAFRYIRKHWAALCNFCDDGLAEADNNTAERALRAVCLGKKNVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK
complement(28400..29971)           PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28505; phage(gi209447153)            0.0                 EscherichiacoliO104H4MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQERISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIETQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQSLYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAENVLRGVAVGRKNWMFAGSDSGGEHAAVLYSLIGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ
complement(29991..30338)           PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28510; phage(gi209447152)            4.31e-57            EscherichiacoliO104H4MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPVTRDGKVHLTPAQLSMLLEGINWKHPKRTERAGIRI
complement(30338..31015)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; C8200_28515; phage(gi209447151)     2.24e-23            EscherichiacoliO104H4MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFSTVPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH
31080..31292                       ANR family transcriptional regulator; C8200_28520                                    N/A                 EscherichiacoliO104H4LHGFRNSSRNGQVWRWQRAGSRAVILEVSGRWMEAAEAWRRAAGVAPRTDWQQFARKRAEHCHRRSRGRV
31463..31578                       endonuclease; C8200_28525                                                            N/A                 EscherichiacoliO104H4VLFNVCCNIQDANTGAIYLIWRVTGNIFHGYYLSFHGG
31583..31705                       sugar kinase; C8200_28530                                                            N/A                 EscherichiacoliO104H4MNFPREGANKRGNSSRLTQSFHFFMFEPIFSPVNALNQPI
complement(31743..32723)           PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; C8200_28535; phage(gi16129935)     0.0                 EscherichiacoliO104H4MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSH
33004..33258                       replication regulatory protein RepA; C8200_28540                                     N/A                 EscherichiacoliO104H4MSQTENTVTSSSGAKRAYRKGNPLSDAEKQRLSVARKRASFKEVKVFLEPKYKAMLMQMCNEDGLTQAEVLTALIKSEAQKRCM
complement(33302..33412)           replication protein RepA; C8200_28545                                                N/A                 EscherichiacoliO104H4MKIIGVFAFLAPVDPHQNQFPATLRRGQPQNSLNDQ
33496..33570                       RepA leader peptide Tap; C8200_28550                                                 N/A                 EscherichiacoliO104H4MTGKVQDFFLCSLLLRIVSAGWCD
33551..34391                       incFII family plasmid replication initiator RepA; C8200_28555                        N/A                 EscherichiacoliO104H4VQDGVTDLQQTYYRQVKNPNPVFTPREGAGTLKFCEKLMEKAVGFTSRFDFAIHVAHATGAASTGYCAAAGAVFPLPTGQPRPVFHHHTGHVRTGDRVRCRKTLHHPSHPGPDVPVRAGTDYLPDGIPAYRLLHSDRHHVHTGTVCRSRCVGCGGSCAPQSCMGKQTAQKAGAGYPGYGADSESLAFCAAFPQLPDRAVPWNKTCPCASCEQGTSGYRHPGETAADANLGRALHCWGGKTRSGASYEGAHDSVTPLQPAGHSFSLA
34754..34943                       replication protein; C8200_28560                                                     N/A                 EscherichiacoliO104H4MHLPPQAAGPDRSHISYNMQITSEKPRTSAELKPQSPSLITEKRPRPEGPEQSRFLMLLA
complement(34959..35090)           replication protein RepA4; C8200_28565                                               N/A                 EscherichiacoliO104H4MRELLCAVGVVPTRVYPKSGRISALAGRQGRLRACIQYFQPED
35299..35583                       ribbon-helix-helix protein, CopG family; C8200_28570                                 N/A                 EscherichiacoliO104H4MQMKNNAAQATKVITAHVPLPMADKVDQMAARLERSRGWVIKQALSAWLAQEEERNRLTLEALDDVTSGQVIDHQAVQAWSDSLSTDNPLPVPR
35583..35858                       type II toxin-antitoxin system RelE/ParE family toxin; C8200_28575                   N/A                 EscherichiacoliO104H4MELKWTSKALSDLSRLYDFLVLASKPAAARTVQSLTQAPVILLTHPRMGEQLFQFEPREVRRIFAGEYEIRYEINGQTIYVLRLWHTRENR
35864..36195                       type II toxin-antitoxin system ParD family antitoxin; C8200_28580                    N/A                 EscherichiacoliO104H4VWGQLNIACRVKFKLTITRLDMARTMTVALGDELWEYIESLIESGDYRTQSEVIRESLRLLREKQAESRLQVSCGIYWQKAAAVNLCRGKKMRFKKKLARGLPVKTVAA
36311..36472                       type II toxin-antitoxin system RelE/ParE family toxin; C8200_28585                   N/A                 EscherichiacoliO104H4MSNHNIGTPRPELGEYTFALPVERHMVYFLQTDTEIVIIRILSQHQDASRHFN
36595..36720                       transcriptional regulator; C8200_28590                                               N/A                 EscherichiacoliO104H4MPWHYPISPKNGKPALNPHHDWINTGSLLQNVPLRIWFYPR
36781..36792                       attR                                                                                 N/A                 GCGTTCAGGTCA
36841..37581                       PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; C8200_28595; phage(gi971744895)     1.05e-05            EscherichiacoliO104H4MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRIQSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLK

#### region 2 ####
54118..54498                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; C8200_28735; phage(gi209447151)     1.57e-86            EscherichiacoliO104H4MQKNVTPGRRKDCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPKTLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR
54495..54842                       PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28740; phage(gi209447152)            1.25e-78            EscherichiacoliO104H4MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML
54892..56430                       PHAGE_Stx2_c_1717_NC_011357: transposase; C8200_28745; phage(gi209447153)            0.0                 EscherichiacoliO104H4MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRPRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVLTDGKLHVDDTPVPVLLPGNKKTKTGRLWAYVRDDCNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALKQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE
complement(56566..56697)           PROPHAGE_Escher_CFT073: transposase insF; C8200_28750; phage(gi26250329)             3.19e-23            EscherichiacoliO104H4LIGWSMQSRMTKDIVLNALLMAVWRRNPEKQMLVHSDQGSQYTS
56697..56990                       PROPHAGE_Escher_CFT073: transposase insF; C8200_28755; phage(gi26249410)             1.37e-66            EscherichiacoliO104H4DRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(57446..57946)           PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; C8200_28760; phage(gi17546156)     7.43e-18            EscherichiacoliO104H4MSKFSLEFKREVSEKYLEGELSLKSVGKMYNIDSSTVRKWAYVYRKHGLKTLTGQKRHYDDNFRLNVVRDVIDNSLSIREAAVKYGIPAFNTISKWIKKYSEIDFSMKGQKEDLRPKTPAVYQRNRSTQLTISEREELEFLRVENAYLKKLKALAQEKLRLEQRKK
58067..58240                       PROPHAGE_Escher_MG1655: IS2 transposase TnpB; C8200_28765; phage(gi16132094)         1.35e-33            EscherichiacoliO104H4ISVMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQQASNGLSDNRCLEI
58382..59410                       hypothetical protein; C8200_28770                                                    N/A                 EscherichiacoliO104H4MKVVSDSFNDMHKRRYFNDTMDIINYNRKTIRYTDIIFYFRTLKEIRLKYPFKELESLFEPLNVYPFYYFMPFLFISDLHDKGQYIERIRYVGIISTLIARRAILTDLFVDEQYEQLISRNMGDLKKEYLGYYLQIIDVEINNIASKIFIEPSSFYAFYNRRFNEYVNTMLMEKDISPLIGMDEGAFKKYAVGKSILHLLVSDMVLHIIKKQELTHQFDNMMKSFIMYLTLQDDVLDIMEDIQKQQPSHFYPWISDGKIIESIDENVEKAVLLKFYLGGGIERCEDLINKYVEDIITAVKKINHPLKSWLEVIERMSLKTKDKLDSFKAVRDELHFFLSQQG
59414..59953                       isopentenyl-diphosphate Delta-isomerase; C8200_28775                                 N/A                 EscherichiacoliO104H4MENVILIDHNDCETGIAEKLYTHKKGILHRAVSVYICNSDGKLLLQQRALGKYHSPGLWSNTSCTHPFPGESNLSAANRRLREEMGIECPLSKLLKIYYNVYVGGDLTEHEIAHIFYGISDDEPDLNSLEAMSYKYVSLTELSSEIKFNNDAFSRWFVYCFPYIKNAFLNESNYTNLLI
60768..61748                       PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; C8200_28780; phage(gi16129935)     0.0                 EscherichiacoliO104H4MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLEIMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSH
61931..62934                       IS110 family transposase; C8200_28785                                                N/A                 EscherichiacoliO104H4MQNITLIGIDLGKHSFHIHCQDKSGKVLLRKSLPVPNLLSFWQAVPRLPLWKPAPELILWLAGLLIVMKQNFLRSSFALLLRATRTILSMQKPYAKRHLVPQCDLCNHEQKLSRPCGRFTGSGNHWSVIKSKRPIRCMLFCWNLASVCRQESQWNDFQQYLQRTNFLPIWRSYCAYMPIIFTLSDRSPSLKSHWSRNVVMRDNVFRQYPVLVRPPAYCHRSWEAVNNIAAVGTLLLQPVWYPGSTAQVVKIHFGVNVEIKICDGYSFSAQDPLFRESRISQEGWRIGSGRCWQENTPAYVAHWPTNPGRGQSQHSRLCSKGAA
complement(63210..63398)           PROPHAGE_Escher_CFT073: transposase insC; C8200_28790; phage(gi26251004)             2.65e-31            EscherichiacoliO104H4EPRMMLARMARLHGIQPCQLFKWKKQYLEGTLNAVAAGEDVVPASELAAAIKQINQVQRLLGK
complement(63399..63581)           PHAGE_Entero_P1_NC_005856: InsA; C8200_28795; phage(gi46401643)                      5.73e-10            EscherichiacoliO104H4MSSVNIHCPRCQSAQVYRHGQNPKGRDRFRYRDCHRVFQLTYTYQARKPGMKELITEMAFN
complement(63682..64479)           PHAGE_Vibrio_pTD1_NC_041916: hypothetical protein; C8200_28800; phage(gi100140)      3.47e-06            EscherichiacoliO104H4MKLKQNIEKEIIKINNIRIHQYTVLYTSNCTIDVYTKEGSNTYLRNELIFLERGINISVRLQKKKSTVNPFIAIRLSSDTLRRLKDALMIIYGISKVDACSCPNWSKGIIVADADDSVLDTFKSIDHNDDSRITSDLIYLISKIENNRKIIESIYISAVSFFSDKVRNTIEKDLSKRWTLAIIADEFNVSEITIRKRLESEYITFNQILMQSRMSKAALLLLDNSYQISQISNMIGFSSTSYFIRLFVKHFGITPKQFLTYFKSQ
complement(64695..65017)           PROPHAGE_Escher_CFT073: transposase insD; C8200_28805; phage(gi26251005)             6.00e-33            EscherichiacoliO104H4LARILYIIGDMPPEYHRVWAILRRQSRNEGLPFVNAKRVYRIMSENSLLLLHDKPSRQQREHKGRYRRKATSVGVPMALSLVAMIAKNCELRSPWTVAIVKLTGLCA
65007..65207                       PROPHAGE_Escher_MG1655: IS3 transposase B; C8200_28810; phage(gi16128284)            7.28e-26            EscherichiacoliO104H4MRAKGYCYDNACVERFFHSLKVECLHEEHFISREIMRATVFNYIECDYNRCEPPRESWRLNFLRKR
65213..65952                       PHAGE_Stx2_c_1717_NC_011357: putative transposase; C8200_28815; phage(gi209447180)     2.79e-63            EscherichiacoliO104H4MTKNTRFSPEVRQRAVRIVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKEEFDRLWKKCHCWISCVSSTGSDRYAANCILPRQRITIVSNSDIIRINAVPVRSTMTGRKRYSAYTMKITRYTVCVKSGVSCYGKVSEWPDALWHVSWRLWDLPVFSGVKRSVRPSAGKPLPQATATVSSWQNDLTSCGWLILLAC
complement(65945..66316)           hypothetical protein; C8200_28820                                                    N/A                 EscherichiacoliO104H4MSKHLRPTVLTYHCQFLLHGLSDHVGRGDVFNPQRRINGFMFFSLSVLNLEDHLGLVISPQSPLSAGYITLRACRRSLPLRFSTVTPGGIVGFLIVSYRFNIPDRLAVHLSIHARPELRAHRK
66610..68143                       group II intron reverse transcriptase/maturase; C8200_28825                          N/A                 EscherichiacoliO104H4LIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKLALMGAYPRRWREQNNATGQTGCAANPQGITLRPLPALARQTGLHPKQRQTATTGYPRVAGSYCSAGHADGDGADMGEFSYALIWLPAAQCPPRDPHGEITAHRLRNPGTLGDRRPVQLLRHRTSSTADEGCTPQDQRTFHDSAVENHQGGTYRCRSLSGGQRCATGRCYIAAIIEHHAEVRSIPAALPERESQKRSVVLEQYPTGPKYGGQRKLAVETRGGVLPLCRFCPHRQRHQSTGGSHQGGVSGCARRQSETQAEHGDNHPCRLYLSGAQDHSQTQSLWRDASGLNDPAGESQKLRRIADSTVIRQLQKQSRYGTTQPKTERLGHVLSVRFGQSLQLYRPCRVLEAGSLAGPQILYRYRFPDEVVVITETGSEQNVGFIWNQSRQAQRRNTVPVGGARQEAVPLAATRRSLSEDGDQKHVYIALYRSGNGVRQHLA
68233..68706                       PHAGE_Stx2_c_1717_NC_011357: putative transposase OrfB; C8200_28830; phage(gi209447179)     6.55e-109           EscherichiacoliO104H4LSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
68672..68896                       PHAGE_Escher_PA28_NC_041935: hypothetical protein; C8200_28835; phage(gi100080)      5.71e-10            EscherichiacoliO104H4MLPSETMIWQPEFTDKTLSRKPGAVHWHLVVSVRNNLKTRTSLRPVSILRGWDQSQEMSFPKRWIGIQRGELKF
