gi|00000000|ref|CP034700.1|  Salmonella enterica subsp. enterica serovar Stanleyville strain 4689404, gc%: 52.10%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1180073..1180648                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; EL006_05855; phage(gi712913000)     1.31e-09            SalmonellaentericasubspentericaserovarStanleyvilleMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1180680..1181330                   anti-sigma-E factor RseA; EL006_05860                                                N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1181330..1182286                   sigma-E factor regulatory protein RseB; EL006_05865                                  N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKQLWFAMSLVAASLFFSVNASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1182283..1182762                   SoxR-reducing system protein RseC; EL006_05870                                       N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTLVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1182792..1182908                   transcriptional regulator; EL006_05875                                               N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMGCCPDKHALFLRCGVLQEKSEAFSSSRSPYTMNISSP
1183038..1183051                   attL                                                                                 N/A                 ATCATTGCTCACAT
1183260..1184489                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; EL006_05880; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1184467..1184751)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; EL006_05885; phage(gi169257265)     2.53e-64            SalmonellaentericasubspentericaserovarStanleyvilleMSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1184792..1185031)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; EL006_05890; phage(gi169257264)     1.19e-52            SalmonellaentericasubspentericaserovarStanleyvilleMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1185074..1185856)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; EL006_05895; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarStanleyvilleYGGDWERCTKTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRKRIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRITLDDMKPEYIG
1185749..1186072                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; EL006_05900; phage(gi169257248)     1.18e-19            SalmonellaentericasubspentericaserovarStanleyvilleMRPATNALSDGVLPIFTVFIACDFLCLGAALPVTPITVQAGFYTEHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSPEEVENVAAHLLEFA
1186069..1186263                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; EL006_05905; phage(gi169257247)     6.86e-17            SalmonellaentericasubspentericaserovarStanleyvilleMKMTWFQHPACTTEEADELVKQYRRRGVKTERSLNHDCIHWTVSALLPEFGHVPVRRRACSYLK
1186260..1186541                   PHAGE_Escher_HK639_NC_016158: hypothetical protein; EL006_05910; phage(gi356870664)     6.53e-46            SalmonellaentericasubspentericaserovarStanleyvilleMKTYRSKKWLAAVGQIEQCVLCGRWGTQVAHMNEGKGMGMKRDDCATAAICQECHHEIDNGSHLSREERRCLMNRAIVLTVIKLVRMGKVVPK
1186538..1187092                   DUF1133 family protein; EL006_05915                                                  N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMIYPTSTGKPGEYFRLNTLESVWIQGKLRMWGRWSYIGSGKPGNMFNQLLASRKLTKTAINEALRRLKKSGTSKPELEAFLREMMNGKQKSWLAHCTDSEAMLIDRVIGTVLAEYPALKKLIHQRYEGRGMSKRKMAEQLNELHPDWCLRTCKNRIDQWLCTAENALYVPLCEAYGLDVTRFGN
complement(1187038..1187229)       hypothetical protein; EL006_05920                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMSTITQLYFTPRDTAFLSIPGLKQFVGKNAIAFFTNESPDFAYKMCQFPNLVTSRPYASQSGT
1187296..1187944                   pertussis toxin-like subunit ArtA; EL006_05925                                       N/A                 SalmonellaentericasubspentericaserovarStanleyvilleIILVFFSGYASAVNFLYRVGSRPPDVIFRNGFSSHGNNRNLQQPIRGDSCAAGSRDSNYIATTSDINENTECVQTIVSTVFHRLSLILYLVASSLVIFSELCGYKVCMPILSQLKIFRKQLRLFTTEIQVREVDLENQIPVIYEVHDILGNTQLTSITGKYPGKDCIWYFNQCFFNERSTKGCTILLNGFLRCAGSLTRSIELA
1188077..1188502                   subtilase cytotoxin subunit B-like protein; EL006_05930                              N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKNKLKVLTLALASLSSVCHASMADYNNYTSEVHIKNLSYGVYKSGEKETQFFCIELKRGSEVLTVDTMCKIDVYGNHKQGFDNMLTTARYHYATGQSVRVYYKPDVWSDPDFKCGFSRNELIAITTCDSSGHCMGPEKTN
1188561..1188734                   PHAGE_Entero_phiP27_NC_003356: putative holin; EL006_05935; phage(gi18249892)        7.24e-19            SalmonellaentericasubspentericaserovarStanleyvilleMSEPSSGSCTAVALAGATVFGLFTGMDFGIVFGAFAETLFVAIMPQILSPKSTSSRF
1188940..1189854                   PHAGE_Entero_BP_4795_NC_004813: Shiga toxin 1 subunit A; EL006_05940; phage(gi157166025)     6.93e-40            SalmonellaentericasubspentericaserovarStanleyvilleMKKLIFIMAILLSGSVFANNLEFNLSFKDMQSYVQSLQRIREGLGHSMPNVVVETTSVYQINAGATNDGVVITLEGLDHYGSETISSVRFVLSPQNLYLTGFIYNRVYYHFRDEANITVGPDFADSTEAIKLASNYTDLQRWSGLSRQGLVLSRNNLNSGLITLMSINPQSVTRAEAGTLLRFAHVIPEALRFRQIQRNVRTIFDLRPEPNVYSLSDSDIELTNSWEQLSQNFIHTTPGGQNAIRVGAIFLQNNNAILAALAMLTYCKSSTGNMSYSEGYCEAHSSKSYVVNGVVWDSKTLFFI
complement(1190094..1190526)       CopG family transcriptional regulator; EL006_05945                                   N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMFFSVGVETPKDENTAYGMFLPAFFSLRLQMFLRCYSRPDCPDGERRYPDSCRRLGSEQQCCCRRYQGCWLSGLFRCRIGLRQLGYGCFNRTQGTTAYYFAAHAAQTHRCRIKRCLPSPQPFHRSCAPRTAIA
complement(1190549..1190731)       type II toxin-antitoxin system HicA family toxin; EL006_05950                        N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKSTDLVKEMTAAGCEFKRHNGGSQQVWWSPITGKTFPVLHPKKDLPLGTVKFIKKLARI
1190924..1191292                   PHAGE_Entero_mEp390_NC_019721: putative holin; EL006_05955; phage(gi428782712)       1.50e-54            SalmonellaentericasubspentericaserovarStanleyvilleMSEPVSSATVLAGGVMGASVFGLATGTDYGVVFGAFAGAVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNSLFSILSRIRGG
1191299..1191580                   PHAGE_Entero_mEp390_NC_019721: putative holin; EL006_05960; phage(gi428782713)       5.32e-48            SalmonellaentericasubspentericaserovarStanleyvilleMVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDTLRY
1191580..1192194                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; EL006_05965; phage(gi169257182)     1.43e-129           SalmonellaentericasubspentericaserovarStanleyvilleMNQQQFQQAAGISAGLTARWYPHITAAMSEFGITAPLDQAMFIAQTGHESAGFTVLRESFNYSVEALKKTFGKRLTPYQCGMLGRIDGRQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGRDNYHKCGDALGIDLLLVPQLLEQEGYAARSAAWFFATKGCLKFTGDLVRVTQIINGGHNGIGDRRERFEKAKSVLV
1192191..1192670                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; EL006_05970; phage(gi169257238)     2.92e-61            SalmonellaentericasubspentericaserovarStanleyvilleMNLLPVLLKKYWLQLSVTLLIAALAWTTEHYRDNAIQYKSQRDTASHSLTLANATITDMQTRQRDSAALDARYTKELADAKAENDALQRRLATGGRVRVEGRCSVPTQTETASTSRVGNAATVELSPGAGQNVFNIRAGIISDQEKLKYLQEYIRTQCG
complement(1192910..1193311)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; EL006_05975; phage(gi169257237)     8.90e-91            SalmonellaentericasubspentericaserovarStanleyvilleMKFKSITKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDDNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
1193607..1194143                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; EL006_05980; phage(gi169257236)     8.44e-112           SalmonellaentericasubspentericaserovarStanleyvilleMKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRIPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1194115..1196046                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; EL006_05985; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYIWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1196030..1196233                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; EL006_05990; phage(gi169257234)     4.01e-42            SalmonellaentericasubspentericaserovarStanleyvilleMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1196230..1197486                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; EL006_05995; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleVKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGV
1197487..1198140                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; EL006_06000; phage(gi169257232)     6.57e-149           SalmonellaentericasubspentericaserovarStanleyvilleTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAANAL
1198128..1198487                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; EL006_06005; phage(gi169257227)     1.57e-80            SalmonellaentericasubspentericaserovarStanleyvilleGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSQ
1198484..1198903                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; EL006_06010; phage(gi169257225)     2.60e-90            SalmonellaentericasubspentericaserovarStanleyvilleMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITRDFPGSQYR
1198866..1198943                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; EL006_06015; phage(gi169257217)     5.41e-09            SalmonellaentericasubspentericaserovarStanleyvilleGSRVISQEVSTADEGDGGQVVVIGR
1199005..1200498                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; EL006_06020; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVTVVYRVGEQEQTPLEGFESSGAETVLGVQVKHDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQRLTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSV
1200501..1202978                   PHAGE_Salmon_ST64B_NC_004313: tail protein; EL006_06025; phage(gi23505468)           2.43e-173           SalmonellaentericasubspentericaserovarStanleyvillePPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVIGEVQTKAPLDSPAFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETINSAAGAMQKSQNGGDIPDKTRFARTIGAVTSTSVTFGESGWFKIATVFMPQATSTAVIKLYGGSGYNVGSFEQSTISELVLRAGNGSPVGIIATLWKRSPNGVLECAWINTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGDSTSGQTYTLFNSLMKPTPEDVGALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGLKQNGDGILDTFANSQHTVRVAPGEMQVLGAIRAGNAKRMTMTSSNNSVLNAQFHLWGDGNRPTVIELDDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
1202993..1203511                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; EL006_06030; phage(gi15834244)     2.34e-60            SalmonellaentericasubspentericaserovarStanleyvilleMELKNVTRYTPDDPDYDNNFLYFRSEDGQDFYESLSKFTKKYKLCIDSENIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGAVVAVPVDYHAKAETTRQKLLTDANSTIVDWRTELALGDISDDDRASLTKWMVYIRALKMLDLSDVKDEATFTAIRWPTLPQ
complement(1204391..1205881)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; EL006_06035; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMTYRLKKCMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
1206310..1206323                   attR                                                                                 N/A                 ATCATTGCTCACAT

#### region 2 ####
1423470..1423799                   PHAGE_Entero_UAB_Phi78_NC_020414: tail spike protein; EL006_07010; phage(gi456351076)     8.36e-06            SalmonellaentericasubspentericaserovarStanleyvilleMYFLWDCFNLWADIGNEKDRPGNYSLSEYPVHQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNYQLPTTNKSFSRWSR
1423862..1425011                   PROPHAGE_Escher_MG1655: IS3 transposase A; EL006_07015; phage(gi226524700)           3.79e-53            SalmonellaentericasubspentericaserovarStanleyvilleMTKPVSTTKKPRKQHTPEFRHEALKLAERIGVAAAAQELGLYESQLYNWRSKQQNQLSSSEREQKMSAEIARLKRQLAERDEELAILQKAATYFAKRLKSMSSSKIIRLSSVSKQCVVCFGLPAAAGMPGVCAIIGKARVSSSVSSVMRRSVRPSQKRNSVMVRLVWQMSCRSTTSKPLLPVCVVRDYGRKPHGSSARSVTVGTIYPWQKICNRTSELAARTRSGRVTLRICARMKVGCTGGGHRSVVAFRHWLVYVVAHDSATDLCTANGALAAAPEECHRSHGSRRAVLFNGLSELTETEFAREHECQRLLLRCLRGKLLPHAEGGMYPRRGLCHPGNNADSSVLYRVRLQSVASPQCLWRSQSGTIKPEPRLG
1425076..1425219                   PHAGE_Salmon_vB_SalM_SJ3_NC_024122: tailspike protein; EL006_07020; phage(gi639162972)     2.37e-08            SalmonellaentericasubspentericaserovarStanleyvilleMDGWGSYVSNILMQDCAGSGDLWYTYGKAFTYISVIDTKTLTLTNCL
1425592..1426038                   PROPHAGE_Escher_CFT073: transposase; EL006_07025; phage(gi26246249)                  1.64e-49            SalmonellaentericasubspentericaserovarStanleyvilleMDEKKLTALAAELAKGLKTEADLSQFSHMLTTLTVETALNAELADHLGHEKNAPKTSSNSHNGYSLKTVLYDGGEIVLNMLRDRENTFELQLIKEHQTRITRWTVRFIPLCQRHDMTTREIIATFKEMYNADVSPMLILKITAAVKELV
complement(1426209..1428131)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; EL006_07030; phage(gi255252697)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWVYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITMIDEKMSFPGYIAIIPVLGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELILLLLSSFFLAILTYYLIEKPLRNARNKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSAGEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDTLSLTIKKIKEASPDSRIIFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
complement(1428149..1428403)       PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; EL006_07035; phage(gi100002)     1.39e-33            SalmonellaentericasubspentericaserovarStanleyvilleMKISLVVLVFNEEDTIPIFYRTVHEFNELEKYKVEIIFINDGSKDVTESIIKIIAVSDPLVIPFSFTRNFGNDARCTTILLIFF
complement(1428372..1428761)       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; EL006_07040; phage(gi100049)     2.34e-73            SalmonellaentericasubspentericaserovarStanleyvilleMLKLFAKYTSIGVLNMLIHWRVFAFCMYGMHTHQALTNFSDFVIAVSFSFYANARFTFNASTTAIRYMMYMGFMGALSAVVGWMADQCSLPPLVTLITFSAISLVCGFIYSRFFIFRDKNENLSCRPSF
1428878..1429068                   hypothetical protein; EL006_07045                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleLIDVIDQLVLLIAKRLGIKTGHVKLCIVLQGFAFFFRERYLKGWKCWGEGERKFCIILVTNAA
1429082..1429706                   PROPHAGE_Shewan_MR-1: ISSod4, transposase; EL006_07050; phage(gi24373869)            1.69e-07            SalmonellaentericasubspentericaserovarStanleyvilleMSHPFDFDKALKALQVRLGINGQRWHLNVINQVFNRVYPVCTFPSGSGCGKPKWFRQKAIKAPTGSFELATPRNRNGTFEPLVKKLQTPCTTRSSAISFDCLRWRVIRTSAGRVKIFMPSAFQPPPSVQYRSHPTKTVATAPAGEGLSRRLAGRYSLKPGWPLSEQGGLYRSGTESGRQKRSSGPISVGKRCLLVKT
1429857..1429871                   attL                                                                                 N/A                 TGTCCCCTGCAGGAA
complement(1430047..1430307)       Txe/YoeB family addiction module toxin; EL006_07055                                  N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKVRISPQAKSDLQYWAETDPKTHNKVMELIKSAKESPFKGIGKPEALKHRKPLWSRRITKEHRLVYYVEQGDLYIVACRYHYTTI
complement(1430307..1430552)       type II toxin-antitoxin system prevent-host-death family antitoxin; EL006_07060      N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMQHVNYTDARQHLADLMQQANDDRAPILVTRKGAKSVVMIDAEEFASIQETLHLFSNPANAAHIEASLASLERGDYEELDI
complement(1430890..1431468)       hypothetical protein; EL006_07065                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMTSIYITQKNISAINALYSEYMIYVLYRNLSNILFSLVLINFLLFILMSDSHKLYCAGVAFFICYIYFSGGYSKQSRKAGEQAIRYINFIMSGSSISDADFSNTLQKLTSHNSMVPPGVLRGLYIFIMISANTAPLTIAKAKCELTRYEKLVIWLAGGLPMENTGIKLKISLNSINYDLLVNFNQSTNNDRN
1431577..1431837                   PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; EL006_07070; phage(gi17975123)     1.25e-18            SalmonellaentericasubspentericaserovarStanleyvilleMRSPKIICPECESNSVIKKTVRKHPQLSDIYCACNNVECGHTFVVNMTFSHTLSPSALTGAKAVKTMIDMMTPDQKRAALDLLNNS
complement(1431849..1432199)       hypothetical protein; EL006_07075                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMSNFFEEKTAQFSPFAVQAFGVKLTSRYDKVCEYAEMLRFIHFIAANDLQHLFREIDYDSQSQCCYFSFNSSVNLSRCEIKRIIKIASTCLSQFEIDDCIHHGDGISRVKDKCYIQ
complement(1432814..1435483)       PHAGE_Ralsto_RSY1_NC_025115: hypothetical protein; EL006_07080; phage(gi691326897)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMKADKHIHKEIINRLVKDFQFEEQNGYLRKGVCPACHKKELFTSLANPWVIKCGRENKCGREILTKEHYSDLFNNWSERYIQSPASPHAAADAYLEHARGLETARIGGAYSQESYHSGGMGSATIRFSLPGGAWWERIIDKPERFDRKANFKGTYAGQWWICPSLSLEQQPEIWIAEGIFDALSLIQNGIAAVSIMTAGNYPEQALKELAGLYKGKALPKLVWALDNGQAGEKAILRHVKRSRDEGWKAGAALPSESGSGVDWNDLHLRGKLTPRHLKTYRYNGALLLAGDAREKALLMFEHSERQEFHFEHGSRLYWFKLDIERHMKAVDRILGGDRTTDEREARRIALEESGAIKEIANCYPVPLYFQRSEPTDEAWYYLRVTFPGSTPAVKGTFTAAQLSSASEFKKRLLHIAKGAIYTGNTPQLDRLIRHDLPRIKEVQTQNYIGYNRDWRAWVFNSLAVSNGVIHTLNSEDYFGVEGKSIKSLSHSPELQLNADETDWNASWVNDLWTAFGTKGFTALAFWLGSFFAEQIRESHKSYPFLEIVGEPGTGKSTLLDFLWRLCGRDDYEGFDPSKSTPAARARNFAQVSNLPVVLIEGDRTKDTQKQRGFDFDDLKPLYNGRGVRATGIKTNNNETYEPPFRGAIVIAQNAVVDASPAMLERIVHLYTDKRSQSTSTRDAAERLERMPVENVSGFLLRAVQKENDILSTVEKVYSEVKPQLENHPKIRHNRIAKNHAQMIAFTEALACVLPVSVEQIRLTRDAVIELAVERVQATERDVPEVCEFWDMFDDLNSLEKFGVNHYGKDNQELIAVNFAYLAQVASLQRVPLPASMRDIQRQLRTGKARRFEGIKAVRSQISEEFNAGKGKAGVTLPEVFKCWVFRCEP
complement(1435533..1435802)       PHAGE_Entero_P4_NC_001609: helper derepression protein; EL006_07085; phage(gi9627515)     8.95e-15            SalmonellaentericasubspentericaserovarStanleyvilleMSDLNTITVNSPEKHLSVECFHKLNRARNVSFQMHLQIRQCEINGLPLLWVPDIFSYISEDISAVLEEAKALGLCDNFTGNARIGQVSL
complement(1435891..1436298)       hypothetical protein; EL006_07090                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMDNILFTPFIADRNFYDMVYGAVFLARKLPGTNDIKQRMLYCRLLQIHFTALLDKRSRNMPPVSEFETGKADKIIYLNSDNIYHTLSLTAGLINKNTSQGIENELGGAVLNVVFLMYREMRMQMRDYDPAEFQDN
complement(1436291..1436713)       hypothetical protein; EL006_07095                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMTNLISLPLPASADLFQAGDMCGQFVARLTDENCVDDVERFALCGRLAYALRSLTALCDADYPPHIQAQLTAAVIPAPCVPDEWIDATIMTGYCTALNAALLSRSLRVDVETQLRWLLHDMVNLLVRYLKQPCIKGADRG
complement(1436706..1436909)       PHAGE_Entero_N15_NC_001901: gp32; EL006_07100; phage(gi9630502)                      4.06e-06            SalmonellaentericasubspentericaserovarStanleyvilleMASHQCNQTRPKNRVFLFLAVSRADMQDKPHREQVTAYSEREARSMLAGHFILCFAGRLPVQGAQHD
1437102..1437287                   hypothetical protein; EL006_07105                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMAVDNVNNKSQKMSARVPHDVANSVEELKEPGESTAQFIVTSLQGEIKRRQRRKKLDTLKE
complement(1437503..1438510)       PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; EL006_07110; phage(gi148727153)      2.49e-55            SalmonellaentericasubspentericaserovarStanleyvilleMSYGTPAYLKQYHEELMKSLNVKYKNEETGYFTVSQPDKASPDAWGCSTINVKGTGWLIDKIALLDVTGADGTTITIGDGSLYTGRAKEGRFYKKLKTNGTPFLLSETDSCASLTYEEMAVMANAKNFSNEMIAFFKKAVVRDMLRIGFNGKMIAENTDPEQYKNGEDINIGWHALAKTFNKGSQVISDAFALGKGGDFADVHDLADCLITSKIPEGQREDPGLVVMVGAQLAARERLKLFNMADQPLTLTAGDMLESSVAGRFAFIPPFMPGKRLAVTTLKNLQILTLKHSQRYRAEDIPTRGTYEHGYLREEGYALGDGYLYAASDENAVTLV
complement(1438520..1439278)       hypothetical protein; EL006_07115                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMRIIELYRLNKMMHLAREYESIAGESVGIPATKQEVFTLVNKGHEFCQAEQEKLTALEAELQRLPQPAGITAPQTIKEAQQARNSQEDERYRLHYAKVKNQVRAQQERLSIRQTILALLAPVIDVLLAVEDVELLDLRRSLPKSSLDVKAFKKAIVEIECADLAWQKMDKLEHALNNVVNNCTYRPEGNINSRFVNPLNEDKRERAEISRDYYSPDMAFIHPVMSAGEYLDYMLPIRQAYRTQQRVLERNTD
complement(1439428..1439646)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; EL006_07120; phage(gi9627517)     2.04e-07            SalmonellaentericasubspentericaserovarStanleyvilleMHTQTTLSGLQGKRLIRINKVIEITGRSAPSIYRDIKMKRFPKPVKTGPQSVAWLEQEIVEWIDSKIKEREE
complement(1440120..1441142)       PROPHAGE_Escher_Sakai: integrase; EL006_07125; phage(gi15833097)                     7.09e-138           SalmonellaentericasubspentericaserovarStanleyvilleMIDPRRVVPEKIITFEEIARTWHERKKKGWDEDHAASVLRGLEKHIFPVIGNASIKDMTTPDLLVPLRIMEEKGILETTARQKQRINNIMRYAVQCGYIKYNPAQELEGAIEVNKTTHHPGLAADALPDFLKRIDSYFDNNNGRLLTQYALNLNLLIFIRSSELRFARWNEIDFDNALWTIPPKRVSIPNVKFSHRGSKMKTPHDIPLPRQAIKLLKEIKNISGDYELIFPGDHHESKPMSENTINKALRNLGYDTKKDVCGHGFRNMACAALTESGKWTREAVERQMSHQERDDVRAAYVYQAQHMQERRKMLQWWADYLDHSRNGFTPPYEFKWRYRK
complement(1441169..1442319)       PROPHAGE_Escher_MG1655: IS3 transposase B; EL006_07130; phage(gi16128284)            2.68e-178           SalmonellaentericasubspentericaserovarStanleyvilleMTKPVSTTKKPRKQHTPEFRHEALKLAERIGVAAAAQELGLYESQLYNWRSKQQNQLSSSEREQKMSAEIARLKRQLAERDEELAIPPKGRDILREAPEMKYVFIENHQAEFSIKAMCRVLRVARSGWYAWRLRHHRQSPRQQFRLICDAAVRKAFTEAKQRYGAPRLADELPEYNIKTIAASLRRQGLRAKAARKFSPVSYRGHDLPVAENLLKQDFRAGGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLTCDALQMALWRRKRPKNVIVHTDRGGQYCSTDYQSLLKRNNLRGSMSAKGCCYDNACAESFFHTLKVECIHGEDFATREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFENQNLA
complement(1442347..1442631)       PROPHAGE_Shigel_301: putative P4-type integrase; EL006_07135; phage(gi24114228)      4.44e-18            SalmonellaentericasubspentericaserovarStanleyvilleMKLTDTKIRKTKPDTENGKIIKLSDGNGLYCWIDPNGSRYWRFRKVINGKETTRALGKYPIMSLADARAARDAYLADLAKGIVILPVNSGHGTK
complement(1442812..1442883)       tRNA                                                                                 N/A                 GTCCCCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAGTTGCAGGTTCGATTCCTGCAGGGGACA
1442812..1442826                   attR                                                                                 N/A                 TGTCCCCTGCAGGAA
complement(1442959..1443900)       PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; EL006_07145; phage(gi966197797)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMDSLNDDKINRHSSDLEVESEEKQSGKEIEVDENRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFLWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQS

#### region 3 ####
1849631..1849642                   attL                                                                                 N/A                 TCATGTTTTAGA
complement(1851251..1851379)       PROPHAGE_Salmon_LT2: integrase; EL006_09145; phage(gi16766072)                       3.56e-10            SalmonellaentericasubspentericaserovarStanleyvilleEASLRYYLAQGFSRKEALAMVAMDLGHGDGRGRYVAQVYSQF
complement(1851380..1851532)       PROPHAGE_Escher_Sakai: integrase; EL006_09150; phage(gi15833097)                     2.61e-12            SalmonellaentericasubspentericaserovarStanleyvilleMALTDTAIRKIKSTEKSFKITDSSGPNLLLKPNGSKLWYMKYRVDGKEKKL
complement(1851697..1851772)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
1851697..1851774                   attL                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(1852181..1852471)       PROPHAGE_Escher_Sakai: putative integrase; EL006_09160; phage(gi15834507)            5.29e-13            SalmonellaentericasubspentericaserovarStanleyvilleMPDQRKRPSSSLTGLASIDSKYWQTGYRFNGKQKVFSIGVYLAVSLTDARQRRDEVKRLLAQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(1852667..1852742)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
1852667..1852744                   attR                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(1852843..1853640)       DgsA anti-repressor MtfA; EL006_09170                                                N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
1853729..1853818                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGCCA
complement(1853885..1854742)       PHAGE_Salmon_ST64B_NC_004313: Integrase protein; EL006_09180; phage(gi23505472)      1.80e-117           SalmonellaentericasubspentericaserovarStanleyvilleMTFSKLWKLFTSSPAFAELAPRTQTDYRSYEKNLVPVFGNMRADDIKIEMVRIYMDKRGQRSINQANQELGGMSRVFSWGYERGYVKGNPCKGVRKFSLKARDVYVTDEEYQAIYEEAAPALRVGMEISYLCAARVSDVLSLKWSQVSEEGIFIQQGKTGTKQIKVWTERLHNAIELAKTLGGRETVICSSKKTKYSKSGFNDLWETAREAAGRKLDRKLPCTFHDLKAKGISDYEGSSKDKQLFSGHKTESQVVVYDRKVKISPTLDLPVLGKSEDDDGEFYTK
1854736..1855284                   PHAGE_Entero_c_1_NC_019706: terminase large subunit; EL006_09185; phage(gi428781737)     4.34e-30            SalmonellaentericasubspentericaserovarStanleyvilleMSLRLNAWIFLPHNAYKFWRQCRRDGLGKRVYLIKGDSTRRQKIITKTHPDNTGRSDRRADARGEVPVYLLQTDLLKDQLSNNLERETPGAADITQWIDGQQFGLGHIEPAVFTTAERDEFDPRMDDYLVWRISFTQAAAFGTDPFAHNGMPLQQAWLGAAPDTGRNHVDDYQLIWEAQPDE
1855277..1855894                   PHAGE_Erwini_ENT90_NC_019932: baseplate assembly protein; EL006_09190; phage(gi431810950)     5.46e-19            SalmonellaentericasubspentericaserovarStanleyvilleMSDIAGDLQRRLANLVRRGVIHSVRHDRIPKCRVDLGDIITTWLPLCQGFSGTNRADSNPYAVGDAVTVLSEAGELNNGRVFPGWNTGKLPVPEGTDSEHITRYSDGTEIRYDRNAHALTITLADGGTYKIVGKGTLDGPVEITDTLTVQGKTQINADTSVAGNIGASKEITDKSGSMSKIREVFNKHDHRGDSGGLTDKPNQKM
1855933..1857402                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: tail sheath protein; EL006_09195; phage(gi428782746)     1.49e-66            SalmonellaentericasubspentericaserovarStanleyvilleMSQLHGVETIELTSGTVAVTTIQTAIIGLVGTAPDASGGTAASGSSGTPILDNVIDFTATIKGREGNVINVAALAGQPAAENPAAVVTSASWDPESLTLKITLGCDEHGVITAKPGDVAEAVGGVDGAKVSASGRGDGIVQPFSLQLAGGEDEPFPLNTPVAVVGTTLLSRLGEKGTLKQALTDINDQRNALTVVVRVADENDVAKRRAAVLKGIGTLSSAKSVTTYQPRIVIAPGFSEDDAVGKGLETVAEKLRAVAYVDCASGATLQEVVQRRQSYGARTELLRPRVQASDADGQLVYRPYSAFAAGLRARIDFEKGWWWSKSNQDINNILGVEQIDEFILGDENCDANLLNMQNVSTIIRRAGFKHWGNRLCATNPQWRFESVRRTADVIEDSIQETMLEYVDRPLDRENADDIIGTINAYMRQLVGLGAIFGGRAWLDEELNTAETMASGVLYINYDFGPKSPTELISLRVRVNNNYALEEMLAA
1857399..1857905                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: tail tube protein; EL006_09200; phage(gi428782747)     6.97e-14            SalmonellaentericasubspentericaserovarStanleyvilleMSDKNTLRVWTFFRQGIRIQGAHEFTPPSLAIVKTDLRTGAQDAPTPVDDGMEALTCQVKFYGIDTDMLASFGFVSGSRSRFTAYQGYLGNGTARGTVEEIEGFVQTVTPDARSKDTLSENAVTVDIAVSYYRQSLDGRELFAIDTERFARRVNGVDVLSGLAAKVRL
1857964..1858263                   PHAGE_Pseudo_PPpW_3_NC_023006: hypothetical protein; EL006_09205; phage(gi564292501)     3.61e-06            SalmonellaentericasubspentericaserovarStanleyvilleMSFPGETRVIKLYSPVSLDSGVVIDEVTMREPLVRDRITHAKDRGNEEEKEARMIALLCNLSEQDLWQMTAADYSQLLDAFNVFMLPPAKRPKAGSSGQ
1858366..1859883                   PHAGE_Entero_HK022_NC_002166: tail length tape measure protein; EL006_09210; phage(gi9634134)     2.74e-05            SalmonellaentericasubspentericaserovarStanleyvilleVGGISQNLKAVITFGGNLDNSWKRSADGLQKSLKDVGKQSERLTKDQTKLAAEIKRAKLAGESLGDLKRRYTDVSREIRKTEAEQQKLNVQMQKAQRIQAFKGAGKGLFRRGLGIAGQVGGMFGSGLAIGGGGVVASALGTLIAPAATNAETATRTNVAKSYGVDVATFNAWDSLAKQYDMNAENIGDLFEEYLHKSGEYKQNGKQGSLQDAFETLGFKAGDFAGLSDMAQFDKIVERALSLQDESKASFALDSLFGGEASKLLMLIKQSGRSYRDLMDEQRRYNLVTKEGADGAVAGNQAINNLRTVFSSAVAEISGQLGNELAPDIRNLTNDLADWFKGGGIKRIVTFLRNDLYPGVLSFGQGVVFVGKIIYALAKKLSWLLPDERNDQRDVLKTLAGNGMNMARLRAEQTGQGEWFSQQLATHPDLPEKVKESWNDTRGWFGPDSDDEAFNKSLDKYLLPEGGDSLLNWNAALQQNKDHVAQTVKEEPESSAGARDNYAHEPV
1859880..1859951                   phage tail protein; EL006_09215                                                      N/A                 SalmonellaentericasubspentericaserovarStanleyvilleGSGHRNKNWTMTLKHYADDLSNP
1859926..1860141                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: putative tail protein; EL006_09220; phage(gi428782752)     1.02e-10            SalmonellaentericasubspentericaserovarStanleyvilleMPTIYQTRDGDVLDAICAVHYGTENLSDSVTQVLEANQGLADQGAMYPSGLYITLPDLVTPVAESPFSLWD
1860143..1861261                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: putative tail protein; EL006_09225; phage(gi428782753)     4.45e-34            SalmonellaentericasubspentericaserovarStanleyvilleMADQTAMPEYAPAFSIQAEGKDITRVLQQCLNELTLTDYGGATAKADELKVSLISETLALPTKGARLRVALGFNDQLIDKGWFVVSGISSSGPPRCIELYATAAPMNAQKQPGDVTSQKTRSWDNLRLADIVKTVATDNGLIPRVADALKDIRINHIDQVAESDANLLARLARDYNAVSKPSGGYWLFLQQGATATASGKQTGGITITPDEVSNWSYSEGERGSSTGKATGSGGKAKEKIGVRYYDEEDGTTKTSSVEHDGPAMTNPYTQSEKNTAEQQAKSRKTQAKRNEQKMTLTGPCRPKHVPLTAEASVSTSGFGSREDRAWVVESLVFSLTSAGFSYTYNLVVDIRKPAAASKKSEKQDKKGPSYFG
1861301..1861654                   PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: baseplate assembly protein; EL006_09230; phage(gi428782737)     5.15e-27            SalmonellaentericasubspentericaserovarStanleyvilleMNGVNNRTGKRLSGVAHLRQSVSDILTTPIGSRVLVRDYGSDLFSLVDNPRDDLTRLQIIAASATALARWETRLKVTRVLVSFPEGESGCVLDIEGINKETNLPVRTGDITIYGKQL
1861638..1862558                   PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; EL006_09235; phage(gi712913208)     2.38e-83            SalmonellaentericasubspentericaserovarStanleyvilleMASSYDVINLSELDVPDAIVVPDATEIFTRWLARLRELDKQFDALVESDPTFKQGEVNAYQLTLAFQRVNDAVRAVFLASAKEADLDQIGAAFNVKRQVIKPGDPLAIPPVEPELEDDAAFRERIQLSWAQLNTAGARNAYRFHAKSADTDVLDADAYGPETHNRPGYVDVYVLSRTGDGTAGQPVLDKVNSTLNADEIRPLTDYVTVKSATIANYAVTAELEIPEGPDASTVLNNAIDVLRSYTTLSHRIKTVVPLSAIYASLQQSGVVRVRLISPVADLEAEPGKAPWCTAINVTRREVSSNDG
1862548..1863111                   PHAGE_Pseudo_PPpW_3_NC_023006: putative tail protein I; EL006_09240; phage(gi564292495)     3.73e-36            SalmonellaentericasubspentericaserovarStanleyvilleMTAKFRSLLPPGAFHEERAQEQASTEQIATLDTNMVRKSKNPDTCPAHLLPWLAWEHAVDFWDDGWTEAQKRQVIKDAAYVHQHRGTAGAVRRSLGSINLPTTVVEWWEEEPRAAPYTFRIEVQSSEVVSDALYHQIRQLTDRAKNLRSYLSKIDVMANVGMDGAFYISGATTSHIDVDIFAGGSHG
1863104..1864732                   PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; EL006_09245; phage(gi966201574)     4.45e-42            SalmonellaentericasubspentericaserovarStanleyvilleMADYYSIITNRGKELEAEALASGRLIVLTHFVVGDSNGRQVKPDPAQIRLINETYRGGIAELVVSPEQSTQLMAKIVLPTGIGGFTVREVGLMTDAGELYAVANCPSIDKPVGGVSVNMQFRLAVSDTSNITLNVATGDGLFLRIDQNLKEIKVRGAEAQKTSRESIGVLDSTTQQRGLVQLSSSVNSTSETQAATPAAVKIAMDNANARLAKERNGADIPNVPLFLQNLGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSYWQVITLTEVVSPTSVVDVLAISGNNVVFGHGTGAGITSWRHVAMLEGAAFTGDISAPNMRGDTLVTVGDGTAGLAKGDFDGAGFNGNNLNIKSWNGIGFQNAEDRAIRAYISTRLGVIAAAENLQAGNAIFNKNGDVYGDIWGGGSGPGWLSAYIAGRPLRQYITMVGLYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGATEQGNVYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
1864735..1865250                   PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; EL006_09250; phage(gi744692741)     3.00e-14            SalmonellaentericasubspentericaserovarStanleyvilleMRHFKNFTKTTELTPVQQELSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVMEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRQALDVAPDINWPE
1865262..1865275                   attL                                                                                 N/A                 GATAAAAATCATGT
1865640..1866080                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; EL006_09255; phage(gi971758532)     6.75e-35            SalmonellaentericasubspentericaserovarStanleyvilleMGRIYFPSTSNTYFSEENITAYKASGVWLNDFYALTDEELDKYYMKIPPQGMCLGSSNGRIAWFCISPPTQDDLISAANQEKKKRIDQANEHMNSRRWPSKAALGRLTGDELAQYNLWLDYLDALEAVDTSVAQNIACPPPEKLYT
complement(1866140..1867969)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; EL006_09260; phage(gi255252697)     7.68e-70            SalmonellaentericasubspentericaserovarStanleyvilleMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYETLSKNAISSLLFYSNNYYAIHSSYFDPSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAISLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKYCEVYGIVLIVVAVVILHSNGYWPSYSTLAPVLGASMVILANEQNSLFTSNRIAQWAGKISYSVYLWHWPVIVAMKHYDIEFSAINIFLGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLRSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKGINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(1868308..1868550)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; EL006_09265; phage(gi46402108)                  2.27e-40            SalmonellaentericasubspentericaserovarStanleyvilleMFMELVYDKRNFDGLPGAKDIILGELSKRVHRIFPDADFRIKPMMTLPAINTDASKHEKGQISRTVQEMFEEAEFWLVSE
1868824..1869975                   PROPHAGE_Escher_MG1655: IS3 transposase A; EL006_09270; phage(gi226524700)           4.35e-53            SalmonellaentericasubspentericaserovarStanleyvilleMTKPVSTTKKPRKQHTPEFRHEALKLAERIGVAAAAQELGLYESQLYNWRSKQQNQLSSSEREQKMSAEIARLKRQLAERDEELAILQKAATYFAKRLKSMSSSKIIRLSSVSKQCVVCFGLPAAAGMPGVCAIIGKARVSSSVSSVMRRSVRPSQKRNSVMVRLVWQMSCRSTTSKPLLPVCVVRDYGRKPHGSSARSVTVGTIYPWQKICNRTSELAARTRSGRVTLRICARMKVGCTWRWSSICGRVPSLAGLCRRAQRNPVMHCKWRSGGVSARRMSSFTRIAAGSTVQRIIRALLKRNNLRGSMSAKGCCYDNACAESFFHTLKVECIHGEDFATREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFENQNLA
1870002..1870115                   PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; EL006_09275; phage(gi401817614)     1.67e-09            SalmonellaentericasubspentericaserovarStanleyvilleIKDANAWIESSVSTFKDISTVEEEERTFMLFNPNGGL
1870118..1870500                   PHAGE_Entero_HK140_NC_019710: hypothetical protein; EL006_09280; phage(gi428781967)     9.59e-47            SalmonellaentericasubspentericaserovarStanleyvilleMGFPSPASDYVEKRISLDQQLISQPSATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRAHPQPHLINLENGRSCQKMVMATIPHTQYLELSRTSLMMPGTRNLMTVRCGA
1870854..1871043                   hypothetical protein; EL006_09285                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMTKSIADKSVTDLTKEIDKLKKVAKDLEDVLPEKTPQINSVKKNHCNKRKRKRDRKAFQSIA
complement(1871268..1871939)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; EL006_09290; phage(gi56692976)     1.12e-50            SalmonellaentericasubspentericaserovarStanleyvilleMCGRFSQSMTREDYLALLAEEAERDIPYDPEPIGRFNVAPGTKVLLLSERDEKLHLDPVVWGYAPGWWDKPPLINARSETAATSRMFKPLWQHGRAICFADGWYEWKKEGDKKQPYFIHRTDGQPIFMAAIGSTPFERGDEAEGFLIVTAAADKGLVDIHDRRPLVLSPDAAREWMRQDVGGKEAAEIAADGSVPAENFIWHAVTHAVGNVKNQGPELIETMR
complement(1871974..1872162)       hypothetical protein; EL006_09295                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMAERGGFEPPVELPLLRFSRPISLVIFSITYPFSLVCPQYFHFIKFNYLHVYPYLIYQHFLS
1872197..1872379                   hypothetical protein; EL006_09300                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMISSYINPCIKISFTRSIFLTTDAVFYHFAARRASTFIFFSSQAHTLLQRPSHISGDKTV
1872772..1873149                   hypothetical protein; EL006_09305                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMFSKNSFMNAPKTSYANSLLLFPSRQHRDYVKKQRADIENIGNNVKRFVRVFICHLNLQKWLYCYQYKDNFSCPDKSFLKLFVLTGFIHLLNGCVLVWSCHLDALRSHILFYHRQQGKLAAGIDF
1873176..1873994                   hypothetical protein; EL006_09310                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMQLPEQDEFSDFFAANDDEQASLRRKFFLEKHKEPCLSESALEDYQALFMSIYGINIDWKEGTFSLLEALSDNQGGKPVTVKFDYDSEIETATINLVDTQYVFHHYPMGSDGFDTELVRIEHILANSGYSLRVYQNSTFSDTLSFLLIPSDEWKRVEQHYSPEHISEYFVPYGKQLVIPEVTAPVVNYVPSVKQEASNVPALFNARGIRICFLSIMLIAFAIYILWNILTKIEPLSSGQPAGCENLQNLYSKLRPEVAEPLKEKMRKSLGCK
complement(1874255..1874389)       PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; EL006_09315; phage(gi17546157)     1.30e-16            SalmonellaentericasubspentericaserovarStanleyvilleNWKKKFAGPGVTELRRLRQLEDENQRLKKLVADLSLDKEMLQEVL
1874456..1875478                   PROPHAGE_Shewan_MR-1: IS110 family transposase; EL006_09320; phage(gi24375433)       5.33e-76            SalmonellaentericasubspentericaserovarStanleyvilleMNIVFLGIDLAKNVFQLCGLNQAGKPVYTKRTGRKELLQTLANIPACLIGIEASTGAFYWQREFEKLGHKVKVISPQYVRPFVRGQKNDGNDAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRIVNHRTATVCQIRGLLLDRGIPIGSAVSRARRAIPLILEDAENGLSSRMRRTIAELYDLFNDLGRRIHFFDKEIETVFRQSEACPRIAKVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNDTGYQVVCN
complement(1875683..1875799)       PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; EL006_09325; phage(gi17546157)     3.26e-15            SalmonellaentericasubspentericaserovarStanleyvilleMKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFY
complement(1875879..1876000)       integrase; EL006_09330                                                               N/A                 SalmonellaentericasubspentericaserovarStanleyvilleLHKYLSVVKSTEFLCLMLLLLYKAYRVKITIKYPLPLACT
1881502..1881515                   attR                                                                                 N/A                 GATAAAAATCATGT
1881510..1881521                   attR                                                                                 N/A                 TCATGTTTTAGA

#### region 4 ####
complement(1976240..1976701)       PHAGE_Strept_SF3_NC_028952: hypothetical protein; EL006_09890; phage(gi971759841)     5.40e-07            SalmonellaentericasubspentericaserovarStanleyvilleMFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATAPHDNDIDCCRWVSADEILNAPNLRSPLVAESIRSYQTGQRYPLSIVGEFNWPFTEGVK
complement(1976713..1977042)       PHAGE_Aeromo_CC2_NC_019538: hypothetical protein; EL006_09895; phage(gi423261545)     9.42e-10            SalmonellaentericasubspentericaserovarStanleyvilleMKRLLIAFALLTPLSVNAASFDCQKAQAADEKAICAHLTLNDKDVEMHTKYQFLKGLFAMGSRGALQDAQQSWLKQRQQCKADVTCLTKAYNERLKQLDAIYDHIDKPL
complement(1977039..1977704)       23S rRNA pseudouridine(2457) synthase RluE; EL006_09900                              N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPGKRTGKIYYVQVEGIPDNAALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWCEIAQEKDR
1977876..1979126                   NADP-dependent isocitrate dehydrogenase; EL006_09905                                 N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMESKVVVPVEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIIENM
1979192..1979205                   attL                                                                                 N/A                 TCTTCCCCAAAACT
complement(1979241..1980383)       PHAGE_Entero_HK022_NC_002166: integrase; EL006_09910; phage(gi9634144)               2.13e-75            SalmonellaentericasubspentericaserovarStanleyvilleMAARPRSHKISIPNLYCKLDKRTGKIYWQYKHPVSGRFHSLGTDEVEAKKVASEANTIIAEQRTRQVLSVNDRLARMKGRRTDITVTEWIDKYIEIQDERLKHRELRPNSYRQKAKPVRLFREHCGMQYLKDISALDISEITDAVKAEGHNRMAQVVRMVLIDVFKEAQHNGHVPPGYNPALATKQPRNRVTRQRLSLEEWKTIYEAAEKQEPYLQCGMLLAIITGQRLGDICNMKFKDIWDDMLHVEQEKTGSRLAIPLDLKCEALGLTLRDVVSKCRDAVISKYLVHFRHTTSQANRGDQVSTSSLTSTFKKARDRSGLKWDKGSPPTFHEQRSLSERLYREQGVDTQKLLGHKSRKMTDKYNDDRGKDWVIVNTKTG
complement(1980373..1980609)       excisionase; EL006_09915                                                             N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMSRMIPLLDWANEEFGAQAPSERILKKYAKGKMMIPPAVKVGCYWMVDRNARFVGTLAEPKIPANASPRLQRIIADGC
complement(1980659..1981162)       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; EL006_09920; phage(gi100055)     2.48e-44            SalmonellaentericasubspentericaserovarStanleyvilleMSNNKLTDRKIAEILARAEICDDSVLTDYTDIAAAMRELQERRRLDGIQHAVCEVCGVPCNNPNHPQMAVAHEYSAQPVPVVPEECPAELPYAQVKAAADLYALCWQSGEVVTYTPDPEKATIWLNNYSGTCVQEYVKLERLQEALSGYSPVIPRVYLADINTDHQH
complement(1981159..1981490)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; EL006_09925; phage(gi374531692)     3.07e-06            SalmonellaentericasubspentericaserovarStanleyvilleMSNKIVFVNGKSKCGCVMAFSDGGGEYSDVHTIIPCAEHSCLNRHLLSVMICDRCANNWKKQKSKWKNRCGLSVWPTRLETPGRTASYTAPQTIAVKGSVWRMYCDGA
complement(1981483..1981803)       PHAGE_Entero_mEp213_NC_019720: hypothetical protein; EL006_09930; phage(gi428782634)     2.26e-23            SalmonellaentericasubspentericaserovarStanleyvilleMNKITALPVERDNYGYWTHPLYEQFCDGREVISPDELNAWLEANGLEWKVSYLDDEEIDPDVDGCDISTWQPDPPAGNGWFVGSIHDTEDGAVCIWLRNVQDGHYE
complement(1981839..1982669)       PHAGE_Salmon_epsilon15_NC_004775: RecT; EL006_09935; phage(gi30387413)               1.26e-106           SalmonellaentericasubspentericaserovarStanleyvilleMPKQPPIAKADLQKTQGARTPTAVKNNNDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGDCDTMSFVSAIVQCSQLGLEPGGALGHAYLLPFGNRNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDDFSFEFGLEEKLVHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRAQSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKETLTIDPADASVITGEYSVVESAGVEENVTA
complement(1982662..1982823)       PHAGE_Salmon_SPN1S_NC_016761: putative exonuclease VIII/RecE-like protein; EL006_09940; phage(gi374531231)     6.31e-07            SalmonellaentericasubspentericaserovarStanleyvillePVEIFMMGEDAKLAGQREYRRNLQTLAECLNNDEWPAIKTLSLPRWAKENANA
1982826..1983131                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; EL006_09945; phage(gi169257311)     4.93e-67            SalmonellaentericasubspentericaserovarStanleyvilleMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPALEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVISWYF
1983221..1983745                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; EL006_09950; phage(gi169257312)     1.36e-111           SalmonellaentericasubspentericaserovarStanleyvilleMEKIAVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGTWVLGVGYSF
complement(1983835..1984368)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; EL006_09955; phage(gi169257313)     5.18e-125           SalmonellaentericasubspentericaserovarStanleyvilleMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1984419..1984431                   attL                                                                                 N/A                 AATATTTTTGCAA
1984458..1984604                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; EL006_09960; phage(gi169257314)     2.00e-28            SalmonellaentericasubspentericaserovarStanleyvilleMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPL
complement(1984595..1985296)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; EL006_09965; phage(gi169257310)     1.39e-61            SalmonellaentericasubspentericaserovarStanleyvilleMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERNGS
complement(1985268..1985606)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; EL006_09970; phage(gi169257309)     6.24e-37            SalmonellaentericasubspentericaserovarStanleyvilleMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(1985603..1985998)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; EL006_09975; phage(gi169257308)     5.38e-40            SalmonellaentericasubspentericaserovarStanleyvilleMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQLETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(1986049..1986456)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; EL006_09980; phage(gi169257307)     3.26e-56            SalmonellaentericasubspentericaserovarStanleyvillePNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(1986659..1987471)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; EL006_09985; phage(gi169257272)     7.28e-167           SalmonellaentericasubspentericaserovarStanleyvilleMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSFTFCDYNQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDTDQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLIKEWAERLKNKPTPVKKT
complement(1987598..1987948)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; EL006_09990; phage(gi169257273)     2.36e-45            SalmonellaentericasubspentericaserovarStanleyvilleMKNSPLIWRGFLHPEFKTGELMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1987970..1988128)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; EL006_09995; phage(gi169257274)     1.28e-29            SalmonellaentericasubspentericaserovarStanleyvilleMLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
1988527..1988733                   PHAGE_Entero_HK225_NC_019717: hypothetical protein; EL006_10000; phage(gi428782417)     2.11e-24            SalmonellaentericasubspentericaserovarStanleyvilleMERDELEEDRAAFIAGEIGGAVVELIIDGVVINRDAIVERLEEKRRRVGNVIHKGVLRDAAAMVRKGQ
complement(1988769..1989596)       DUF3037 domain-containing protein; EL006_10005                                       N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMTTPCLYSIVRYAPYAETEEFANIGVVICAPKENYFDFQITKRNDSRVKNFFHDDCIFPIAKDTIQRELQFAKAQASQISGHQQLAQFFRYFTTKKESIFQFSTTRVVLSANPKEDLARIYNKYVNHSDYTKERREDVLARELKRSIDRIDGLKNVFKQESIDGFYSKFSMPLVAKKHNEIQCAIKPIAFTQTEPGKMMEHSDIWVMRITRASEENLLDIEDILFTIEVPESPTKGQSKVIDTIKRTMDAKKINHIPASNHKDTIEFAKKLLLET
complement(1989593..1990342)       hypothetical protein; EL006_10010                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMEREAGNDDAIPNVVEVIRRINEGSTQPFLCKCDDGQLYVLKSKPSMPPKNLLAEFISGCLAQDIGLTLPDFKIVFVPEELVEYSPELQSNICTGHAFASQYIEGAVALTFSQSRNEAIVPIEQQKLIYVFDRWVINADRTLTSKGGNVNILYDVGNDKYYLIDHNLSFDENAGPDDFLVHVYGPGNRKWEFDLVDRLEYRQKVVDSLVKLPAIIEEIPDEWIVDDEFLPFVYDTLDKGDRDEFWSEIV
complement(1990493..1990960)       PHAGE_Entero_mEp237_NC_019704: prophage repressor; EL006_10015; phage(gi435439304)     1.04e-93            SalmonellaentericasubspentericaserovarStanleyvilleMTKVKHHFTNKSNIACLPTSKAIIYNEAMSDNTLTNGLISRLAELNKKGFSKTEMARVAGVSKQAVSSWFKTGRISKSSALAIADAAGVSVPWLLGEDVGEKDGLKPDEQRLLELYRQLPEEEQQNMLRIFAIRLKELDELYEKYMKGRIRSQGD
1990974..1991201                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; EL006_10020; phage(gi169257277)     1.23e-12            SalmonellaentericasubspentericaserovarStanleyvilleMTGIEKAIQKFGTGAALGRALGFSKMTISNWKKTGIPPDHIRSVFELTGVTPHELRPDLYPNPTDALPSQEASAK
1991167..1991541                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; EL006_10025; phage(gi169257278)     2.98e-72            SalmonellaentericasubspentericaserovarStanleyvilleMHYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1991626..1992003                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; EL006_10030; phage(gi169257279)     4.92e-85            SalmonellaentericasubspentericaserovarStanleyvilleMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKP
1992058..1993313                   PROPHAGE_Escher_CFT073: transposase insF; EL006_10035; phage(gi26249410)             8.17e-41            SalmonellaentericasubspentericaserovarStanleyvilleMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTAYLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
1993319..1993701                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; EL006_10040; phage(gi169257279)     1.38e-25            SalmonellaentericasubspentericaserovarStanleyvilleHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGNTKDIIPKTNIKDLPPLIPLREKSLIRVFLFPNGMLRRGTNGLPPGYRLFMTGWMRKIQMVKPLTPRWASLMKRRWPHFHGA
1993698..1993967                   PHAGE_Entero_HK022_NC_002166: integrase; EL006_10045; phage(gi9634144)               5.03e-19            SalmonellaentericasubspentericaserovarStanleyvilleMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
complement(1993905..1994167)       hypothetical protein; EL006_10050                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMNLKRRINCCRKQESYSVSFYFSYKTVTYDQSEIFRNFSEFLYSGLFGYITIKLNLTFISQRKLEYSIIALSSRSSRSFVVFAGA
1994383..1994445                   DinI family protein; EL006_10055                                                     N/A                 SalmonellaentericasubspentericaserovarStanleyvilleLNSDANKSDHEKLNRCLVSD
1994921..1995721                   hypothetical protein; EL006_10060                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMIINVGHVATEKFDTTGVSACNNQQSTSVDLSSCIINAASECTVFVRTIIKKSDSYDAMQIDRLKIDTQEKYDALNLQREHHKKFLQTIKANSFDRAMAERPENPISLSLIYSSIDSIKYNTGNCADMSLILGAIIAKYIPQRLTGIGFSKNNVFDARISTSLMYNSASGGNHVVVSLTFTDSKGISEYILDPWLDARIFKKEESYEIYKNNSSEYINENHCFEAYDKYTAIMNSAEYIDAITKTINILYRVNLDEIQLTNPFKFI
complement(1995750..1995887)       PHAGE_Entero_P1_NC_005856: Cin; EL006_10065; phage(gi46401653)                       1.14e-07            SalmonellaentericasubspentericaserovarStanleyvilleMGAAGRLIRAGVPQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
complement(1996201..1996314)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; EL006_10070; phage(gi399528790)     5.53e-07            SalmonellaentericasubspentericaserovarStanleyvilleIAPVTYTGQGIQWYIKREILSPRYTIRYEDLLRVK
1996369..1997139                   transporter substrate-binding domain-containing protein; EL006_10075                 N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKKVYFMFVILLSLSGIHSAMAKPWQEIKESKELRVGVPGDYAPLAFHNKQNKLIGFDIDMAYSLGKALHLNILFVPSSWPTLSTDLAADKFDIAMGGITETPGRRKQFALSSPVLKNGKIALTQCNRINDFKSLEDIDRKGVRIVVNPGGTNLDYVDKHIRYADVIREKDNDATLQRIRERSADVMFTDLLEGTYYQNKEPGVFCVSTRSILPDTAGNKVYMMAKDNQYLLDAVNSWLSDENRIILARKWLINPE
1997135..1997332                   PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; EL006_10080; phage(gi418489717)     4.02e-13            SalmonellaentericasubspentericaserovarStanleyvilleSSRHKVLTSTIADRTELARSERCDDDKASQAKWMAYIRKLKTLDLTGVSDEATFTIIRWSALPQ
1997575..1997760                   hypothetical protein; EL006_10085                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMNKFNSVLLALVFAISAITFSSSAMATESGNKGFPGISFPWCKIWPAGISIPELPLGKICW
complement(1997851..1998426)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; EL006_10090; phage(gi169257321)     4.16e-122           SalmonellaentericasubspentericaserovarStanleyvilleMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRSETVYDTTTGNQIYISAPGPLPENVTSVSPDGEYQKWDGKAWVTDEEAEKAAQLRQAEETKNNLLQMATEKIAPLQDAVDLGEATDDEKTRLMAWKKYRVQVNRVDTTNPDWPDKPASL
complement(1998426..1998869)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; EL006_10095; phage(gi169257320)     3.59e-104           SalmonellaentericasubspentericaserovarStanleyvilleYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1998993..1999622                   PHAGE_Phage_Gifsy_2_NC_010393: pseudogene; bacteriophage tail fiber C-terminus (Host specificity); Lambda gpJ homolog; EL006_10100; phage(gi169257318)     1.30e-146           SalmonellaentericasubspentericaserovarStanleyvilleLDFFKGQITESHLGKELLEKVDLTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDISGSKVMQGVSIRATNDERSTSTRYTDS
1999879..2001510                   PHAGE_Salmon_ST64B_NC_004313: tail protein; EL006_10105; phage(gi23505468)           2.38e-175           SalmonellaentericasubspentericaserovarStanleyvilleMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSIEGLIEYVGLRETINHAADALQKSQNGGDIPDKKQFARTISAVTSTTITLGESGWFKIATVFMPQATSTAVIKLYGGSGYNVGSFEQAAISELVLRAGNGSPVGITATLWMRSPSSANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLYSAPEYSETKPANATNGQTYTLYNSMMKPTAGDVEALSVNGGRLNGALGIGTDNVLGGSSIVFGDNDTGFKQNGDGILDTFANSQHTVRVAPGEMQVLGAIRAGNAKRMTMTSSNNSVLNAQFNLWGDGNRPTVIELDDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
2001525..2002043                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; EL006_10110; phage(gi15834244)     2.34e-60            SalmonellaentericasubspentericaserovarStanleyvilleMELKNVTRYTPDDPDYDNNFLYFRSEDGQDFYESLSKFTKKYKLCIDSENIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGAVVAVPVDYHAKAETTRQKLLTDANSTIVDWRTELALGDISDDDRASLTKWMVYIRALKMLDLSDVKDEATFTAIRWPTLPQ
complement(2002272..2002459)       hypothetical protein; EL006_10115                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMRHRIFSPLLLVLSATAFSASAMAASDTKPPTRYKIRLQWTAANTRPIYSSPLVQLATRYAA
2002598..2002610                   attR                                                                                 N/A                 AATATTTTTGCAA
complement(2002685..2002933)       PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; EL006_10120; phage(gi418489717)     4.90e-24            SalmonellaentericasubspentericaserovarStanleyvilleMASAPGVQFWRAEVTRQKLLNDADNAIKDWRTELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPSLPQE
2002927..2003043                   phage tail protein; EL006_10125                                                      N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMPDDLVIVESAPEKIDTISCKMTVPPSGHHNGFFFCTC
2003162..2005168                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; EL006_10130; phage(gi169257322)     8.69e-72            SalmonellaentericasubspentericaserovarStanleyvilleMPFHVGGGCLPATISNHRIYLIALFNTQPEMSSWEKMKEFFCSTHQTEALECIWMICHPPAGTTREDVVRRFERLRMLAYAGCEENIHSGLHGESNFCILDAGNQEILSVTLDDAGNYTVNCQGYHETHRLTLDTAQGEECTGHAEGASGTLRTSLLPATTTPQTAAEYEAAWSEWKRAAPEGESRGRAEAVKRMRACLKKGNSVLYVGRVGLTTLPDLLPPNITTLFIPGNTLTRLPALPPGLRELSVSYNQLTRLPPLPPGLCKLSVFNNQLASLPALPSGLQILWAYRNRLTRLPALPPGLRELSVYRNQLTRLPESITGLSSEATVNLEGNPLSERTLQALRDITSAPGYSGPRIRFDMAGASAPREVRALHLAVADWLMPAREGEPAPADRWHMFGQEDNAAAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRITFFLHQMKNVQLVHNAEKGEYDNNLAVLVATGREMFRLGKLEQIAREKVRTLALVDELEVWLAYQNKLRKPLGLTSVTAEMRFFGVSGVTASDLRSAERQVKAAEKSEFREWILQWGPLHSVLERKAPERVNALREKQMSDYEETYRMLSDTELRPFGLVGNTDAERTIGARAMESAKKAFLDGLRPLVDDMLGSYLKARRRLN
2005264..2005486                   DUF4113 domain-containing protein; EL006_10135                                       N/A                 SalmonellaentericasubspentericaserovarStanleyvilleGDFFSQGAAQLFRRAARRREADGRTGSPECKERQGKAVLCRGGHPAAMGDETDAFAAVHNKVFRSAARVA
complement(2005479..2006150)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; EL006_10140; phage(gi56692976)     3.14e-49            SalmonellaentericasubspentericaserovarStanleyvilleMCGRFAQAQTREEYLAYLADEAERDIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVFWGFAPGWWDKPPLINARVETAATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHRADGQPIFMAAIGSIPFERGDDAEGFLIVTAAADKGLVDIHDRRPLVLSPEAAREWMRQDIGGKEAGEIAADGAVQADKFIWHAVTRAVGNVKNQGPEMIEPVT
2006322..2006335                   attR                                                                                 N/A                 TCTTCCCCAAAACT

#### region 5 ####
2885629..2885643                   attL                                                                                 N/A                 GCTACATTTTTATAA
2885949..2886140                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; EL006_14830; phage(gi428782688)     5.05e-34            SalmonellaentericasubspentericaserovarStanleyvilleMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2886411..2887097                   virulence protein; EL006_14835                                                       N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
2887082..2887382                   hypothetical protein; EL006_14840                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleVYHFMIVNLYQDNYSGYCQHGGSEVQILSCRPKFPLKTSLSGLFFFMAQFPTGKLWGETGESRRDSTQFAIDSSVCSLLSFGIHQYTNFHFELLYKFPVA
2887451..2888077                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; EL006_14845; phage(gi56692976)     3.20e-36            SalmonellaentericasubspentericaserovarStanleyvilleMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(2888209..2888627)       PHAGE_Stx2_c_1717_NC_011357: transposase; EL006_14850; phage(gi209447153)            9.26e-06            SalmonellaentericasubspentericaserovarStanleyvilleSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTGAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(2888725..2889693)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; EL006_14855; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2889839..2890165                   PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; EL006_14860; phage(gi418489717)     2.37e-22            SalmonellaentericasubspentericaserovarStanleyvilleMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(2890169..2890750)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; EL006_14865; phage(gi169257321)     7.23e-143           SalmonellaentericasubspentericaserovarStanleyvilleMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(2890750..2893187)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; EL006_14870; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEENADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKASMLSWTRYRPKRRWTVRHLVRQQHQLRKPQLQVLKLPRQRLWLRKWRSWLVLRRKRWTRKNWLTRWVTIRTLPPLYINWRASSRWTIHRRCQEKALTVLSNTLVYGKPITPPMHYNHRTVAIFRKSRCLYKISERSLHQVRLLQRTDWHHAARFRHLVRQEAAIAAWARSTTMAIRRNTEIFYVPELVMGKSSLAGAGQTVRQRPHIFAVIEIPPMLSGPNGRCSTPHIRHRIRIQVRRHGRLMLPQPVTPCRGNRLINLLTRYWLRIRPALSLTCGAGQRVSPSVDVLYCRKKWTATNRTVTAPERRILTGQNLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITPHFSLEVVHGHRPLATMHIQFISEDMSTPCIVHTDTSLLWTQTVMRKPRLKTLHLTTGWHAA
complement(2893241..2893483)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; EL006_14875; phage(gi169257319)     6.58e-54            SalmonellaentericasubspentericaserovarStanleyvilleMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2893522..2893728)       PHAGE_Phage_Gifsy_2_NC_010393: pseudogene; bacteriophage tail fiber C-terminus (Host specificity); Lambda gpJ homolog; EL006_14880; phage(gi169257318)     6.58e-37            SalmonellaentericasubspentericaserovarStanleyvilleMNGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVGGQYTTEASVWPLVMVSRSGSNFTN
complement(2893782..2894276)       hypothetical protein; EL006_14885                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPEIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAILKSAPELHKRITAGQSIEYLLSQLLKKPQWQARYFLARRWRILSESVTRPYMHYRRYVAVSATYQIGKTIT
complement(2894263..2894517)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; EL006_14890; phage(gi428781916)     1.26e-25            SalmonellaentericasubspentericaserovarStanleyvilleMNKISTYRKQLGLSQRQLATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2894616..2895014                   PHAGE_Entero_mEpX1_NC_019709: prophage repressor; EL006_14895; phage(gi428781915)     2.00e-25            SalmonellaentericasubspentericaserovarStanleyvilleMKTIAEQIGERLKTIRQNRGLSMGRLAKLCGWSGSSRIANYEAGTRSIGAEDAITLGQVLGISPAELMFGKQENANSWLSDNQQKLLELFNQLPASEQTRMLDLFEIRLKEIDEYVEQYLRSRQYKKDTPSS
2895311..2895466                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; EL006_14900; phage(gi472340166)     3.45e-12            SalmonellaentericasubspentericaserovarStanleyvilleMKAIDLGNNESVVYGVFPNNDGTFTAMTFTRSKTFKTEAGARRWLTRNHCD
2895572..2895721                   formyltetrahydrofolate deformylase; EL006_14905                                      N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMNFRELPISVQNIAAQLLADRMPCATNTSENEPAMALAQNINDAFTKLYN
2896402..2896686                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; EL006_14910; phage(gi169257274)     1.05e-09            SalmonellaentericasubspentericaserovarStanleyvilleMIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKKQKYCSKRCASHDQMAHEL
2896761..2897096                   hypothetical protein; EL006_14915                                                    N/A                 SalmonellaentericasubspentericaserovarStanleyvilleMKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNEDGYSRNKSITAYADEKTGAWDSTIAAAAMLLKVKDVPREVIGALKSLSVASDFARAMSEASKEKSLH
2897234..2899006                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; EL006_14920; phage(gi169257272)     3.96e-69            SalmonellaentericasubspentericaserovarStanleyvilleMSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETERADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKRMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYAPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPAGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELYEARKNIPPKSPVDVGKQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQETDSDEKQAGDAVQAGEGDLGTGKEAVS
2899048..2900205                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; EL006_14925; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
2900248..2900487                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; EL006_14930; phage(gi169257270)     1.19e-52            SalmonellaentericasubspentericaserovarStanleyvilleMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2900528..2900777                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; EL006_14935; phage(gi169257269)     1.96e-49            SalmonellaentericasubspentericaserovarStanleyvilleMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKKSTRCEDNMA
2900822..2902114                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; EL006_14940; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarStanleyvilleMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2902149..2902163                   attR                                                                                 N/A                 GCTACATTTTTATAA
