gi|00000000|ref|CP034719.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4766197, gc%: 52.17%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1232692..1233267                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; ELZ71_06080; phage(gi712913000)     1.31e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1233299..1233949                   anti-sigma-E factor RseA; ELZ71_06085                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1233949..1234905                   sigma-E factor regulatory protein RseB; ELZ71_06090                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1234902..1235381                   SoxR-reducing system protein RseC; ELZ71_06095                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1235411..1235527                   transcriptional regulator; ELZ71_06100                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGCCPDKHALFLRCGVLQEKSEAFSSSRSPYTMNISSP
1235632..1235644                   attL                                                                                 N/A                 TATGAAGAACATA
1235879..1237108                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; ELZ71_06105; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQGLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKQMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1237086..1237370)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06110; phage(gi169257265)     2.53e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1237411..1237650)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06115; phage(gi169257264)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1237693..1238850)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; ELZ71_06120; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1238813..1241740)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; ELZ71_06125; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGINPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVNTETDEVLEDHNENFGNGSNCPSPATAPAPELTIVATMPLRYRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
complement(1241867..1242217)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06130; phage(gi169257261)     3.04e-81            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKRVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1242239..1242397)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06135; phage(gi169257260)     1.53e-30            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLARKEKEYCSRQCAEYDQMAHES
complement(1242751..1243446)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; ELZ71_06140; phage(gi100116)     8.12e-169           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDSKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
1243420..1243605                   amino acid permease; ELZ71_06145                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSDTVSYIHAFITLIFCALCKSTCASLLYEITCDIRKRRRFYAITIEKIAEIAWLYVTARR
1243544..1243768                   PHAGE_Salmon_118970_sal3_NC_031940: thymidine kinase; ELZ71_06150; phage(gi100117)     4.50e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
1243797..1244351                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; ELZ71_06155; phage(gi100118)     2.61e-134           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGIFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCVPEKGDARECAAPGAVASNFMEKTNA
1244348..1245490                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; ELZ71_06160; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEFRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQELSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGIGVLELLSATNDAPASFLLSQLGYIQIMVGWVGAPKGAPVSDNAGYANPAQFTTSEIGVSGGGVTSKLSEAAIMATVPTLAQPEISVINGQAVTSSLAVADYFTKRHDDVLKKIRALDCSPEFTARNFAVSDYTDASGRKLPCYNITRDGFAFLAMGFTGKRAAQFKEAYVNAFNQMEKQLSTPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAAALASLINMTLNRSEVRGRK
1245487..1245711                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; ELZ71_06165; phage(gi100121)     1.26e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
1245708..1246667                   PHAGE_Shigel_SfIV_NC_022749: replication protein; ELZ71_06170; phage(gi557307567)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSTKLTGYVWDACAASGMKLSSVAIMARLADFSNDEGVCWPSIETISRQLGAGVSTVRTAIAKLEADGWLSRKARRQGNRNASNVYQLNVAKLQAAAFAHLSDPDQSKSDPSESDASKSDASKSDPSKSGKNGGFDPSESGGDPSVKSKQDPQGNKTPSCPDASQPDQQMTDQEFLTRHPDAAVLSPKKRQWGTQDDLTCAQWIWKKIIALYEQAAESDGELVRPKEPNWTVWANEIRLMCAQDGRTHKQICEMYSRVSRDPFWCRNILSPSKLREKWDELSLRLSAPIGGRFENREDPMFKSSYGNVDYSQIPTGFRG
1246669..1247151                   PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; ELZ71_06175; phage(gi23505487)     1.62e-114           SalmonellaentericasubspentericaserovarTyphimuriumMSLMGDVQKFIESHPGCTSSDIANAFADFPRKSVLQSASKLRQCGRVAHRFEGKTRRHFALETDIQPDQEPDIGTKPVRSCYVGTNDPQVIMHLIRQAETLESGGLFRRAATVWMEAFRESHIPSERSAFLARRERCLRKSRKYVASGSEWYLSGNYVGS
1247151..1248043                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; ELZ71_06180; phage(gi100124)     1.71e-67            SalmonellaentericasubspentericaserovarTyphimuriumMSNKYCQALAELRSKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAIPAPTSWITQWRCVKRVGVTCSSLKQRQVKRGGRKTLTTSCLSAVVLVSISQCGLFLRTISRNPLVLSLLAPLQSSISHGAASVSATSAVPNWRKKGRRLCHWSNLLRERFSHQPPRFQSKKNPLRQQYYLMWIRVSGRLRLVWCSTKLRGRILWTHYSRTSKPTLINSGWNERPPAKSLLQLLNLFAICGERPCGA
1248040..1248429                   PHAGE_Salmon_118970_sal3_NC_031940: valyl tRNA synthetase modifier; ELZ71_06185; phage(gi100125)     7.42e-90            SalmonellaentericasubspentericaserovarTyphimuriumMKLILPFPPSVNTYWRAPNKGPLAGRHLISADGRKYQSAACVAIIEQLRRLPKPSTELAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAA
1248446..1249306                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; ELZ71_06190; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPSSEQNQSVSFFQGGRDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1249314..1250303                   PHAGE_Salmon_118970_sal3_NC_031940: site-specific RNA endonuclease; ELZ71_06195; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLASLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1250318..1250896                   DUF1133 family protein; ELZ71_06200                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMINPSEVGKSGEMVRLRTLESIWIQGKLRMWGRWSYIGGGSGGNMFNQLLSSGKITKTAINDALRRMKKSGITKPELEAFLREILNSKNKTGLAFCTDEEGLKIDGVIGAILVREGHSGLYSIIMNRYRLRKSKRLMAEELQVKHPEWCYMTCRRRIDSWLSLAESMLYAPMCDTFGTNSDRFYLKSEPVND
1251097..1251822                   pertussis toxin-like subunit ArtA; ELZ71_06205                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKKVILFLAFFSGYASAVDFVYRVDSRPPDVIFRDGFNSHGNNRNLQQHIRGDSCSAGSRDSNYIATTSDINETYNIARVYYSRTTFSGRLYRYRIRADNSFYSLPPSVAYIESRGIQFSHFERVMMRLQSEYVAVNSIPIENIQEAVELVYDRNTSQVRDGSGTSNSRYLRVSTQSNPGVIPNLPVPQVSTRERISAFGTLISACFSMRGVRRDDARSNYNYYEMEFYDARGVLTELLD
1251839..1251851                   attL                                                                                 N/A                 TTTTCTTTTTTTG
1251955..1252380                   subtilase cytotoxin subunit B-like protein; ELZ71_06210                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNKLKVLALTLASLSSVCYANMADYNTYQSNVQINNLSYGVYRSGDKESQFFCVGLKRGSQVPNVHTICKIDVFGTHKQGFDNMLATARYYYATGEDVRIYYKENVWTDRNFTAAFSGNELIAITTCTSSDYCMGPTLPN
1252439..1252585                   PHAGE_Entero_phiP27_NC_003356: putative holin; ELZ71_06215; phage(gi18249892)        1.80e-20            SalmonellaentericasubspentericaserovarTyphimuriumMSEPLSGSCTAVALCGATVFGLCTGTDFGIVFGAFAGTLFVATMPQILS
complement(1252661..1252852)       hypothetical protein; ELZ71_06220                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQETTTQILLYRLLFPVTASPPIAQCVIKGGRLHGLDLSTKHVADDSREPEYEKGHVNAQPLW
1252907..1253095                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06225; phage(gi169257242)     1.54e-31            SalmonellaentericasubspentericaserovarTyphimuriumMKEGYYWIQHNGVAQVAYYTNDTVDDLESGQLIVGVWHLTRGDDICHNGEAEVLSGPLQPPV
1253185..1253574                   PHAGE_Entero_mEp390_NC_019721: putative holin; ELZ71_06230; phage(gi428782712)       1.18e-57            SalmonellaentericasubspentericaserovarTyphimuriumMSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGAVFYVATAINIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNSLFSILSRIRGGGSNGSK
1253561..1253842                   PHAGE_Entero_mEp390_NC_019721: putative holin; ELZ71_06235; phage(gi428782713)       1.83e-49            SalmonellaentericasubspentericaserovarTyphimuriumMVANDPSAILNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDALRH
1253842..1254456                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; ELZ71_06240; phage(gi169257182)     7.01e-147           SalmonellaentericasubspentericaserovarTyphimuriumMNQQQFQQAAGISAGISARWYPHITAAMSEFGITAPLDQAMFIAQTGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWFFVTKGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
1254489..1254935                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; ELZ71_06245; phage(gi169257238)     1.72e-69            SalmonellaentericasubspentericaserovarTyphimuriumMQLSVTLLIAALAWTTEHYRDNAIQYKSQRDTASHSLTLANATITDMTKRQRDVAALDAKYTKELADAQTRNTDLQRRLAAGGRVRVEGRCSVPTRTETASTSRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYIRTQCLK
1255263..1255766                   hypothetical protein; ELZ71_06250                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRRILATTAALCLGGCITVYGPVKTAGQQQQDSQAGQQPGMSEQISTSFIGNRKPDELLNAVALYFREKAITASVNDQTTGIIAGTGDDPELSSLYLDCSLLPQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVKPVECQSTGIFEKDLQERLRK
complement(1256023..1256424)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06255; phage(gi169257237)     1.83e-91            SalmonellaentericasubspentericaserovarTyphimuriumMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDDNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
1256710..1257255                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; ELZ71_06260; phage(gi169257236)     1.81e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1257227..1259158                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; ELZ71_06265; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1259142..1259345                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; ELZ71_06270; phage(gi169257234)     4.01e-42            SalmonellaentericasubspentericaserovarTyphimuriumMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1259342..1260922                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; ELZ71_06275; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGGSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
1260912..1262408                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; ELZ71_06280; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPTDTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
1262421..1262768                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; ELZ71_06285; phage(gi169257231)     2.18e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
1262823..1263851                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; ELZ71_06290; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGLFTTCQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
1263909..1264274                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; ELZ71_06295; phage(gi169257229)     5.27e-78            SalmonellaentericasubspentericaserovarTyphimuriumMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
1264285..1264662                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; ELZ71_06300; phage(gi169257228)     3.93e-82            SalmonellaentericasubspentericaserovarTyphimuriumMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFERA
1264649..1265227                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; ELZ71_06305; phage(gi169257227)     9.02e-136           SalmonellaentericasubspentericaserovarTyphimuriumMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
1265224..1265625                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; ELZ71_06310; phage(gi169257225)     2.19e-92            SalmonellaentericasubspentericaserovarTyphimuriumMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDGWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1265633..1266379                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; ELZ71_06315; phage(gi169257224)     1.54e-173           SalmonellaentericasubspentericaserovarTyphimuriumMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGEAGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
1266430..1266825                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; ELZ71_06320; phage(gi169257223)     2.16e-93            SalmonellaentericasubspentericaserovarTyphimuriumMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
1266822..1267160                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; ELZ71_06325; phage(gi169257222)     1.52e-77            SalmonellaentericasubspentericaserovarTyphimuriumMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
1267132..1270227                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; ELZ71_06330; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
1270230..1270559                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; ELZ71_06335; phage(gi169257220)     5.72e-77            SalmonellaentericasubspentericaserovarTyphimuriumMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
1270569..1271267                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; ELZ71_06340; phage(gi169257219)     2.36e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
1271274..1272011                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; ELZ71_06345; phage(gi169257218)     4.52e-148           SalmonellaentericasubspentericaserovarTyphimuriumMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
1271909..1272556                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; ELZ71_06350; phage(gi169257217)     5.57e-156           SalmonellaentericasubspentericaserovarTyphimuriumMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
1272618..1275980                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; ELZ71_06355; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
1276019..1276261                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06360; phage(gi169257215)     1.13e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
1276315..1278687                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; ELZ71_06365; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1278684..1279508                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; ELZ71_06370; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
1279498..1280076                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; ELZ71_06375; phage(gi169257212)     4.99e-141           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1280173..1280400)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; ELZ71_06380; phage(gi169257211)     5.92e-51            SalmonellaentericasubspentericaserovarTyphimuriumMPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
1280507..1280719                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; ELZ71_06385; phage(gi100036)      2.69e-08            SalmonellaentericasubspentericaserovarTyphimuriumMISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
1280782..1280847                   DUF4113 domain-containing protein; ELZ71_06390                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKREILSLRYTTRYSELLRVK
complement(1281211..1281397)       PROPHAGE_Escher_CFT073: putative transposase; ELZ71_06395; phage(gi26246170)         2.01e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPIIAPIPRTERRLMQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLDC
1281427..1281591                   PROPHAGE_Xantho_33913: ISxcd1 transposase; ELZ71_06400; phage(gi21231544)            4.28e-07            SalmonellaentericasubspentericaserovarTyphimuriumMAIDQITQSGLSSIKVIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
complement(1281512..1282057)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; ELZ71_06405; phage(gi169257210)     1.07e-132           SalmonellaentericasubspentericaserovarTyphimuriumMMRFVYIYILVIYGSYLWFSLGGNMFTINSTNRMASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSNDECKLSGSTSCTTPASHNPPSGYIAQYRHSAEVFPDE
complement(1282304..1282441)       hypothetical protein; ELZ71_06410                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
1282620..1282632                   attR                                                                                 N/A                 TTTTCTTTTTTTG
complement(1282908..1284401)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; ELZ71_06415; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
1284805..1284817                   attR                                                                                 N/A                 TATGAAGAACATA

#### region 2 ####
complement(1668871..1669074)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; ELZ71_08205; phage(gi428782403)     1.90e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK
1669377..1670168                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; ELZ71_08210; phage(gi169257320)     2.99e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
1670465..1670668                   phage tail protein; ELZ71_08215                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
1670837..1673203                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; ELZ71_08220; phage(gi169257322)     1.86e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
1673288..1673524                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; ELZ71_08225; phage(gi23505490)     7.07e-52            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1673532..1674521                   PHAGE_Salmon_118970_sal3_NC_031940: site-specific RNA endonuclease; ELZ71_08230; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1674536..1674904                   PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; ELZ71_08235; phage(gi148609434)     4.01e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(1674933..1676264)       NTPase; ELZ71_08240                                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
1676561..1676890                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); ELZ71_08245; phage(gi23505495)     2.19e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
1676904..1677347                   PHAGE_Entero_SfV_NC_003444: capsid protease; ELZ71_08250; phage(gi19548994)          1.23e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
1677353..1677496                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; ELZ71_08255; phage(gi23505467)     3.24e-28            SalmonellaentericasubspentericaserovarTyphimuriumWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1677483..1678724                   PHAGE_Salmon_ST64B_NC_004313: tail protein; ELZ71_08260; phage(gi23505468)           3.77e-63            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
1678727..1679254                   PHAGE_Sodali_phiSG1_NC_007902: putative phage tail fiber assembly protein; ELZ71_08265; phage(gi89886004)     9.44e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
1679632..1680075                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; ELZ71_08270; phage(gi971758532)     2.08e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(1680129..1681958)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; ELZ71_08275; phage(gi255252697)     2.73e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
1682099..1682245                   PHAGE_Entero_HK140_NC_019710: hypothetical protein; ELZ71_08280; phage(gi428781967)     1.42e-15            SalmonellaentericasubspentericaserovarTyphimuriumILLVIDTSVSPRDDSLLVCIDGEEFRIKRYRTHSQSHPVNFENGKRERL
complement(1682306..1682596)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; ELZ71_08285; phage(gi46402108)                  2.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
1682624..1683127                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; ELZ71_08290; phage(gi100082)      1.29e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM
complement(1683258..1683334)       tRNA                                                                                 N/A                 CGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCA
complement(1683408..1685168)       cardiolipin transport protein PbgA; ELZ71_08300                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWPTTLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKLRSLTRRRHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFEKQMPELATFAEQNIDFTRHMSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITALNQQGYQLGLFSSDGFASPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNRWFSWISFNGTNIDDSNQKNFVKRYASAASDVDAQINRVLNALREAGKFDNTVVIITAGRGIPLTPEENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTPANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQKPQLSLLLQVLTEEKRFIAN
complement(1685200..1685427)       DUF1414 domain-containing protein; ELZ71_08305                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPQLSRYSDEHVEQLLSELLSVLEKHKAPTDLSLMVLGNMVTNLINTSVAPAQRQAIANSFARALQSSISEDNAH
1685607..1686614                   PHAGE_Pseudo_F116_NC_006552: nucleoid-associated protein; ELZ71_08310; phage(gi56692913)     6.13e-63            SalmonellaentericasubspentericaserovarTyphimuriumMSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK

#### region 3 ####
complement(2043032..2043730)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; ELZ71_10130; phage(gi985760125)     7.36e-19            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2043754..2044410)       carbon-nitrogen hydrolase family protein; ELZ71_10135                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2044518..2044748)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; ELZ71_10140; phage(gi422936677)     7.33e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2044886..2045260                   CopC domain-containing protein YobA; ELZ71_10145                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2045261..2046136                   copper resistance D family protein; ELZ71_10150                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2046153..2046506                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; ELZ71_10155; phage(gi971764937)     8.26e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(2046880..2047734)       PHAGE_Entero_HK022_NC_002166: integrase; ELZ71_10160; phage(gi9634144)               1.25e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(2047794..2048288)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; ELZ71_10165; phage(gi985761253)     8.66e-21            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTVQEITTDGGSGTTS
2048478..2048708                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; ELZ71_10170; phage(gi169257182)     4.51e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2048762..2049295                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; ELZ71_10175; phage(gi16765210)     1.20e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2049552..2049719)       lytic enzyme; ELZ71_10180                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2049784..2049972)       hypothetical protein; ELZ71_10185                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2050027..2050287                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; ELZ71_10190; phage(gi169257184)     8.76e-57            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2050445..2051326                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; ELZ71_10195; phage(gi169257205)     8.93e-90            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2051423..2051623)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; ELZ71_10200; phage(gi169257211)     3.39e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2051770..2051781                   attL                                                                                 N/A                 TTATATTTTATT
complement(2051814..2051930)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; ELZ71_10205; phage(gi966201445)     2.58e-06            SalmonellaentericasubspentericaserovarTyphimuriumMWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
2052193..2052318                   arsenic transporter; ELZ71_10210                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2052447..2052713                   hypothetical protein; ELZ71_10215                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVLTLYEGLIEHQIYPGLFNTAYYESNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
2052899..2053139                   Hin recombinase; ELZ71_10220                                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLLSIWKVIWLIASSASCGHCFSTQCATTVPLHWWPAKTDAGAMGAGRVPYGRSTATAGSDYLCGAVDAVQKIPCVRVA
complement(2053466..2054080)       disulfide bond formation protein B; ELZ71_10225                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(2054090..2054248)       hypothetical protein; ELZ71_10230                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2054381..2055295)       EamA family transporter; ELZ71_10235                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2055913..2056113                   hypothetical protein; ELZ71_10240                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
2056404..2056661                   hypothetical protein; ELZ71_10245                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNLKRNINGCRKRESYSVSFFLINQLLMINNPKFPKFPKFSRISVFRAFSLYQIQIQFNISFTAKSEHHVSFIIAFIEIEFRGVL
complement(2056599..2056967)       PHAGE_Entero_HK022_NC_002166: integrase; ELZ71_10250; phage(gi9634144)               5.40e-24            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
2063319..2063330                   attR                                                                                 N/A                 TTATATTTTATT

#### region 4 ####
2871853..2871867                   attL                                                                                 N/A                 GCTACATTTTTATAA
2872173..2872364                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; ELZ71_14560; phage(gi428782688)     5.05e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2872635..2873321                   virulence protein; ELZ71_14565                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
2873306..2873605                   hypothetical protein; ELZ71_14570                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGAEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
2873674..2874300                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; ELZ71_14575; phage(gi56692976)     3.20e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(2874432..2874850)       PHAGE_Stx2_c_1717_NC_011357: transposase; ELZ71_14580; phage(gi209447153)            9.01e-06            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTVAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(2874948..2875916)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; ELZ71_14585; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2876062..2876388                   PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; ELZ71_14590; phage(gi418489717)     2.37e-22            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(2876392..2876973)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; ELZ71_14595; phage(gi169257321)     7.23e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(2876973..2879411)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; ELZ71_14600; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2879465..2879707)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14605; phage(gi169257319)     6.58e-54            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2879746..2883096)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; ELZ71_14610; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEEFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
complement(2883168..2883872)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; ELZ71_14615; phage(gi169257316)     1.99e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
complement(2883770..2884507)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; ELZ71_14620; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
complement(2884517..2885212)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; ELZ71_14625; phage(gi169257314)     2.13e-173           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSAVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
2885302..2885835                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; ELZ71_14630; phage(gi169257313)     5.18e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(2885952..2886449)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; ELZ71_14635; phage(gi169257312)     2.52e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(2886548..2886880)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; ELZ71_14640; phage(gi169257311)     1.49e-78            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
complement(2886877..2889864)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; ELZ71_14645; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
complement(2889944..2890273)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; ELZ71_14650; phage(gi169257309)     1.04e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNNELHFVRQLAREFRRPDWRRMLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
complement(2890270..2890668)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; ELZ71_14655; phage(gi169257308)     9.72e-92            SalmonellaentericasubspentericaserovarTyphimuriumMFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
complement(2890714..2891463)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; ELZ71_14660; phage(gi169257307)     1.44e-179           SalmonellaentericasubspentericaserovarTyphimuriumMTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
complement(2891475..2891876)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; ELZ71_14665; phage(gi169257306)     5.47e-94            SalmonellaentericasubspentericaserovarTyphimuriumMTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
complement(2891873..2892439)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; ELZ71_14670; phage(gi169257305)     1.31e-134           SalmonellaentericasubspentericaserovarTyphimuriumMEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
complement(2892420..2892719)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; ELZ71_14675; phage(gi169257304)     2.90e-65            SalmonellaentericasubspentericaserovarTyphimuriumMADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
complement(2892712..2893035)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; ELZ71_14680; phage(gi169257303)     7.08e-70            SalmonellaentericasubspentericaserovarTyphimuriumMAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
complement(2893126..2895207)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; ELZ71_14685; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKTTVAAIKMPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
complement(2895131..2896648)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; ELZ71_14690; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
complement(2896675..2896881)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; ELZ71_14695; phage(gi169257300)     1.19e-41            SalmonellaentericasubspentericaserovarTyphimuriumMTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
complement(2896878..2899016)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; ELZ71_14700; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMMTTVTKGKRKSRNSLASAVVAGCDISSMFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
complement(2898973..2899506)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; ELZ71_14705; phage(gi169257298)     1.24e-127           SalmonellaentericasubspentericaserovarTyphimuriumMDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
complement(2899714..2900193)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; ELZ71_14710; phage(gi169257297)     5.38e-115           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
complement(2900211..2900663)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; ELZ71_14715; phage(gi169257296)     3.23e-107           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2900647..2900976)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; ELZ71_14720; phage(gi169257295)     8.83e-74            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2901252..2901938                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; ELZ71_14725; phage(gi169257294)     3.63e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2902299..2902748                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14730; phage(gi169257293)     2.23e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2902884..2903009)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14735; phage(gi169257292)     7.66e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2903183..2903500)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14740; phage(gi169257291)     8.35e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
complement(2903567..2904364)       PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; ELZ71_14745; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2904354..2904500)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14750; phage(gi169257289)     1.09e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2904497..2905108)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; ELZ71_14755; phage(gi169257288)                 1.26e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(2905111..2905317)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14760; phage(gi169257287)     1.28e-44            SalmonellaentericasubspentericaserovarTyphimuriumMAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
complement(2905317..2905919)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14765; phage(gi169257286)     1.95e-144           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(2906002..2906223)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; ELZ71_14770; phage(gi169257285)     2.88e-46            SalmonellaentericasubspentericaserovarTyphimuriumMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
complement(2906335..2906568)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; ELZ71_14775; phage(gi169257284)     4.20e-51            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(2906860..2907150)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14780; phage(gi169257283)     2.21e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
complement(2907228..2907539)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; ELZ71_14785; phage(gi169257282)     4.88e-70            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
complement(2907536..2907883)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14790; phage(gi169257281)     6.28e-80            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
complement(2907894..2908643)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; ELZ71_14795; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
complement(2908646..2909629)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; ELZ71_14800; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
complement(2909714..2910088)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; ELZ71_14805; phage(gi169257278)     3.88e-72            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(2910054..2910293)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; ELZ71_14810; phage(gi169257277)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumMDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
2910413..2910823                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; ELZ71_14815; phage(gi169257276)     3.23e-96            SalmonellaentericasubspentericaserovarTyphimuriumMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
2910873..2911133                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14820; phage(gi169257275)     5.90e-20            SalmonellaentericasubspentericaserovarTyphimuriumMLQDRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
2911126..2911284                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14825; phage(gi169257274)     1.62e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
2911306..2911605                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14830; phage(gi169257273)     5.83e-52            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
2911732..2914659                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; ELZ71_14835; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGINPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVNTETDEVLEDHNENFGNGSNCPSPATAPAPELTIVATMPLRYRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2914622..2915779                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; ELZ71_14840; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
2915822..2916061                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; ELZ71_14845; phage(gi169257270)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2916102..2916350                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; ELZ71_14850; phage(gi169257269)     1.40e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2916395..2917687                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; ELZ71_14855; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
2917722..2917736                   attR                                                                                 N/A                 GCTACATTTTTATAA

#### region 5 ####
complement(4372293..4372640)       PHAGE_Burkho_BcepMu_NC_005882: gp01; ELZ71_21815; phage(gi48696911)                  2.19e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
4373216..4373503                   PHAGE_Burkho_BcepMu_NC_005882: gp21; ELZ71_21820; phage(gi48696931)                  3.36e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4373506..4374111                   PHAGE_Burkho_BcepMu_NC_005882: gp22; ELZ71_21825; phage(gi48696932)                  7.11e-68            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
4374124..4374438                   PHAGE_Burkho_BcepMu_NC_005882: gp25; ELZ71_21830; phage(gi48696935)                  1.36e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
4374598..4375053                   PHAGE_Burkho_BcepMu_NC_005882: gp37; ELZ71_21835; phage(gi48696947)                  2.66e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
4375050..4375247                   PHAGE_Burkho_BcepMu_NC_005882: gp38; ELZ71_21840; phage(gi48696948)                  2.20e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
4375237..4376664                   PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; ELZ71_21845; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
4376664..4377188                   PHAGE_Burkho_BcepMu_NC_005882: gp40; ELZ71_21850; phage(gi48696950)                  5.56e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
4377240..4377557                   PHAGE_Burkho_BcepMu_NC_005882: gp41; ELZ71_21855; phage(gi48696951)                  1.65e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
4377517..4377645                   GpE family phage tail protein; ELZ71_21860                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
4377742..4380096                   PHAGE_Burkho_BcepMu_NC_005882: gp44; ELZ71_21865; phage(gi48696954)                  5.41e-61            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKAQIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
4380096..4381048                   PHAGE_Burkho_BcepMu_NC_005882: gp45; ELZ71_21870; phage(gi48696955)                  1.33e-49            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKPVRTRCSSSRWICKRWPGCRKRWRRKCRNSTACRGSANARAMPARLSNTPNRCLTLSPAASRKRLTTAPRRWSIRRAARCKQALLTASLPLPILRGVCAA
4381048..4381257                   PHAGE_Burkho_BcepMu_NC_005882: gp46; ELZ71_21875; phage(gi48696956)                  6.01e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
4381245..4382288                   PHAGE_Burkho_BcepMu_NC_005882: tail protein; ELZ71_21880; phage(gi48696957)          1.76e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
4382298..4383020                   PHAGE_Burkho_BcepMu_NC_005882: gp48; ELZ71_21885; phage(gi48696958)                  2.85e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
4383348..4383710                   PHAGE_Entero_SfV_NC_003444: putative flippase; ELZ71_21890; phage(gi19549013)        2.31e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
4383707..4384636                   PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; ELZ71_21895; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
4384636..4386183                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; ELZ71_21900; phage(gi221328637)     6.53e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
4386347..4386706                   PHAGE_Burkho_BcepMu_NC_005882: gp49; ELZ71_21905; phage(gi48696959)                  3.12e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4386697..4387812                   PHAGE_Burkho_BcepMu_NC_005882: gp50; ELZ71_21910; phage(gi48696960)                  2.24e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
4387805..4388437                   PHAGE_Burkho_BcepMu_NC_005882: gp51; ELZ71_21915; phage(gi48696961)                  5.01e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
4388440..4390185                   PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; ELZ71_21920; phage(gi526003631)     3.07e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
4390190..4390795                   DUF4376 domain-containing protein; ELZ71_21925                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
4390792..4391247                   PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; ELZ71_21930; phage(gi418489075)     2.04e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
4391496..4391786                   hypothetical protein; ELZ71_21935                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
4391983..4392711                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; ELZ71_21940; phage(gi100101)      5.91e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
