gi|00000000|ref|CP035288.1|  Staphylococcus epidermidis strain ATCC 14990 chromosome, complete 2466502, gc%: 32.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1445511..1446215)       PHAGE_Halovi_HCTV_1_NC_021330: hypothetical protein; EQW00_07040; phage(gi509140748)     6.53e-12            StaphylococcusepidermidisMYNEIFGIASFIVTFALMVLMYRCFGKQGLIAWVAIGTIIANIQVIKAVHIFGITATLGNVMFASIYLATDILNDIYGRKVAKRAVWLGFSSTLVMIIVMQMSLHFIPAPVDNAQNSLKMIFDLVPRIAIGSIIAYIIGQHIDVFIFSMIKKIFSSDKTFFIRAYGSTILSSIIDTGLFVSIAFIGTMPGTAVFEIFITTYLLKLVSTIFNVPFGYIAKSLYRKGKIEQLDNGY
1446466..1446660                   zinc-finger domain-containing protein; EQW00_07045                                   N/A                 StaphylococcusepidermidisMKAILTNTEQQAIQHIDQLMNIYCHQCPLKKHNRKTHGKTQAHHFCINECTVGKQIKQIGNELQ
1446672..1446932                   scaffolding protein; EQW00_07050                                                     N/A                 StaphylococcusepidermidisMEIIAISETPNHNTMKVSLSEPRQDNSSTTYTAAQEGQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIENTFAKSN
1446984..1447421                   BrxA/BrxB family bacilliredoxin; EQW00_07055                                         N/A                 StaphylococcusepidermidisMNGYEAYMKELAQQMRAELTDNGFTSLETSDDVNQYMQNIDNDDTTFVVINSTCGCAAGLARPAAVAVAEQNEVKPDHKVTVFAGQDKEATQTMRDYIQQVPSSPSYALFKGQHLVHFIPREHIEGRDINDIAMDLKDAFDDNCQ
1447633..1448682                   ABC transporter permease; EQW00_07060                                                N/A                 StaphylococcusepidermidisMFLAWNEIKRNKIKFSLVIGILVLISYLLFLLSGLANGLIKMNTEGIEKWNADAIILKKEANQTVEQSLFNISKVQNTYEKSTTLKQQGVIISNHHREENALLFGVTHKSFLIPPIIKGHQVESSNEIVIDQTLADKGFKIGDILSLSQSDEKLKVVGIVESAKYNASPVLFSNNQTIEKLNPKLSKDKTNAIVIKDSNWKNHKLNKDLESISISQFIKNLPGYKAQNLTLNFMIVFLFIISATVIGVFLYVITLQKTHLFGVLKAQGFTNCYLAKMVFAQTFILSLIGTIIGFLLTLLTGTFLPPVVPIHFNLLTMLIYGIVLIIISLLGSLFSVLSIIKINPLKAIG
1448698..1449360                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; EQW00_07065; phage(gi371496158)      1.82e-38            StaphylococcusepidermidisMLEFKQVSKSFRDGNQMIQAVKPTDLKIIQGELIAIVGPSGSGKSTFLTMAGALQRPTSGNIYINNKNISILSEKQLSQIRINEIGFILQSTNLVPFLTIEQQFKLLGKYKKDTLSEDEYQKLVKQLNLSDITNQLPNQISGGQKQRVAIAKAIYTNPSIILADEPTASLDTNNAMAVMKILQKQTKERNKTCVIVTHDERLTHFCDKTYFMEDGVLSLQ
1449674..1450630                   PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; EQW00_07070; phage(gi985761245)     0.0                 StaphylococcusepidermidisMYNPFDEAYHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKFKERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTDKSIFDINYEDLELINYESHPAIKAPIAV
1450672..1451157                   PHAGE_Staphy_SPbeta_like_NC_029119: dihydrofolate reductase type 1; EQW00_07075; phage(gi985761244)     6.27e-116           StaphylococcusepidermidisMTLSIIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTGNTLVMGRKTFNSIGKPLPNRRNVVLTNQASFHHEGVDVINSLDEIKELSGHVFIFGGQTLFEAMIDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVRRKGK
1451167..1452015                   PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; EQW00_07080; phage(gi985761237)     4.10e-85            StaphylococcusepidermidisMAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADVKTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSISFGLGYQIKQIVELISQGTSTEEIVKEMTQLRDNLQLFVVIGQLNQLIKGGRISKTKGLIGNIMKIKPIGTLRDGKLELVHNSRTQNSSVQYLKKEITDFVKDHKIKSIGIAHANVKDFVDKIIKSFTESFDFSQFDINVTTPVISTHTGQGAIGLVVLRDTLN
1452118..1452642                   PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; EQW00_07085; phage(gi16271776)     2.43e-23            StaphylococcusepidermidisMAYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVENPTYEQVCTNQTGHVEAVQIEYDPNITTFENILDVYFKTFDPTDDGGQFFDRGESYQPVIFYHDENQLKAAELKKQQIDEEGIFKKPVITPIKPYKNFYPAEEYHQDYYKKNPTHYEQYQRGSGRKAFIESHWGGSK
1452639..1453067                   PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; EQW00_07090; phage(gi16271776)     8.29e-51            StaphylococcusepidermidisMIKKNKEELNDMEYLVTQENGTEPPFQNEYWNHFEKGIYVDKLSGKPLFTSEDKFESNCGWPSFSKALNDDEIVELVDKSFGMIRTEVRSEKANSHLGHVFNDGPKEKGGLRYCINSAAIQFIPYDKLEELGYGDLIKHFKK
1453080..1453580                   PTS glucose transporter subunit IIA; EQW00_07095                                     N/A                 StaphylococcusepidermidisMFKKLFGKAKEVDKNIKIYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPIEGKVDNVFPTKHAVGLKAENGLELLVHIGLDTVQLDGKGFEVLVESGDDIKIGDPLIRFDLEYINNNAKSIISPIIITNSDQTESIHIEDVQAVVKGETQVIDVTVS
1453580..1453804                   YozE family protein; EQW00_07100                                                     N/A                 StaphylococcusepidermidisMVKNYSFYQFIMTVRGRKDDKGVFAEQIFEDLAFPKHEDDFNTLSEYIETHSEFTLPMSVFDDLYDDYTEWLKF
1454149..1455624                   PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; EQW00_07105; phage(gi16129784)     4.49e-37            StaphylococcusepidermidisMNDHQKNHATSQDDNTKSTPSKNSKHIKIKLWHFILVILGIILLTSIITVVSTILISHQKSGLNKEQRANLKKIEYVYQTLNKDYYKKQSSDKLTQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQEKDIKIKRDTIHVKSVEYEKKGNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPDGHYIHGKGIRPDVSISTPKYQSLNVIPDNKTYHQGEKDKNVKTMKIGLKALGYPIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDKKTNDKFTEKLVEKANKKDTVLNDLLNKLK
complement(1455808..1455924)       hypothetical protein; EQW00_07110                                                    N/A                 StaphylococcusepidermidisMVTINLNHIDTFKTQSINENLKKLRNDWDYTLIGITFY
1455960..1456463                   GNAT family N-acetyltransferase; EQW00_07115                                         N/A                 StaphylococcusepidermidisMIRLATKNDLLSITQLVKEAKQIMEEFNNNQWDDEYPAKEHFEEDIENKTLYVLDVDHTIYGFIVIDQNQSEWYDDIDWPVNRNGAYVIHRLAGSKQYKGAATELFQFAIDLANEHDIHVILTDTFALNKPAQGLFEKFGFTKVDEIEIDYHPFDRGAPFYAYYKNI
1456481..1457554                   undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; EQW00_07120     N/A                 StaphylococcusepidermidisMTKIAYTGGGTVGHVSVNLSLIPTSIEKGHEAFYIGSKHGIEREMIESQLPDIQYYPISSGKLRRYLSFENAKDVFKVLKGILDARKILKKQKPDLLFSKGGFVSVPVVIAARSLKIPTIIHESDLTPGLANKISLKFAKKIYTTFEDTLTYLPKDKADFVGATVREDLKQGNKERGYQLTDFDKNKKVLLVMGGSLGSKKLNNIIRQNIEALLHDYQIIHLTGKGLVDDSINKKGYVQFEFVKDDLTDLLAITDTVVSRAGSNAIYEFLSLRIPMLLIPLGLDQSRGDQIDNAKNFESKGYGRHIPEDQLTEVNLLQELNDIELHRESIIKQMETYQESYTKEDLFDKIIHDALNK
1457567..1458181                   phosphatase PAP2 family protein; EQW00_07125                                         N/A                 StaphylococcusepidermidisMNRWKRISLLIVFTLIFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGVTKIGEVWAMVALSLLLVAYLMLKRFKIETLFFVIVMSLSSTLNPLLKNIFDRERPTLLRLIDISGFSFPSGHAMGSTSFFGSAIYVINRHDSGISKGVLIGLCALFILLISTSRVYLGVHYPTDIIAGIIGGVFCIVLSTLILKKQLAV
1458532..1459623                   PHAGE_Bacill_G_NC_023719: gp245; EQW00_07130; phage(gi593777701)                     4.50e-34            StaphylococcusepidermidisMIQIKDLNKVYDNGSYAVKDFNLDIEDNEFVVFVGPSGCGKSTTLRMIAGLEDVSKGTISINDKVINDLQPKDRKIAMVFQNYALYPHMTVYKNLAFGLKMRGIKKKIYDEKIQHAAQILEIENLLDRKPKALSGGQRQRVALGRAIVREAQIFLMDEPLSNLDAKLRSNMRSEIIKIHKQMKATTIYVTHDQTEAMTMASRIVILKQGEIQQIGTPEEIYRHPVNEFVATFIGSPSMNMVPMTYNMDAWYFDGQKVADATLLQLASHAQYRLGIRPEDLHLVNDNEISNYPIQLSQFTVDLVELTGSYKLLHCHHNEHKIIAAVDSNLDFELGQTVSFGIKTEDAHFFDSDSGERVQEEVLS

#### region 2 ####
complement(1879006..1879377)       PHAGE_Helico_phiHP33_NC_016568: transposase; EQW00_09105; phage(gi371671361)         6.41e-07            StaphylococcusepidermidisMSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKRDIGVILRQLCERKGVEIIEAEACKYPVGVVEDQIYYFNEDNIDNVIFEGYSDQDETRFQELFKEMMGNLDEDIKRGTVQQKDSYGLI
complement(1879451..1879666)       recombinase; EQW00_09110                                                             N/A                 StaphylococcusepidermidisMRKGDRFVVESIDRLGRNYDEVIHTVNYLKDKEVQLMITSLPRMDEVIGKPLLYIESHALCVWFRKGFTVI
1879942..1880500                   glutathione-dependent formaldehyde dehydrogenase; EQW00_09115                        N/A                 StaphylococcusepidermidisAQRFAKLKSARRVIAIDHVEHRLAHTEKYNGAEVYNFLKEDDVGKLLHETTRGGADVVIDCVGIDEQVVQDDLEVSSNSIQRGNISPIVTATESVRKYGTIQLIGVYGTAADNSQLDLIFNRNVQVKSGQAPVIHMMPKLYDMIKIKSLIQQKLSLILCLKMKKLYLSEKRCSHFKTTIA
complement(1880567..1880963)       transcriptional regulator; EQW00_09120                                               N/A                 StaphylococcusepidermidisIFNQLFSHPRFFQYKNVEHHNKKFYTSKDLALSVIGKWKTPIIYQLLQTEVLRLSVFEKLLPEINRMLIRQLRELEHDEIIERIVNSVVPQKLSISKRTENTRSSLCNLLGGISGKNFIKCNLA
complement(1880996..1883008)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; EQW00_09125; phage(gi371496158)      3.06e-06            StaphylococcusepidermidisMTINQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFVGYSDAYSFNSPKGMCKTCEGLGYIEDINLDELLDWDKSLNEGAIDFPSFGPDKERGKAYRDSGLFDNNKKLKDYTKDELELFLYQEPMTLKNPPKEWRKSAKYVGLIPRFSRIFLGDKEFNKKRYAKHLKNVVNNKICSTCKGQRLNSKILSSKIMSKNISDFTQMTIKENLEFLNKLEDPTAKYIIDPLKKQLEALEYIGLSYLTLNRVTTTLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDIAKINEILKSLKEKGNTVLIVEHDPDVIKEGDYIIDMGPGSGKNGGEITFEGTYNELLSSNTSTGNALRNKHNLKENIREANHFYNIGPVTQNNLNNVKTSIPKHVLTVLTGVAGSGKSTLVKAGFENNDHTIFIDQKAVQGSNRSNLLTYLGVFDSVRSYFSKETGLNKAMFSYNSKGACPNCGGKGYIKTELAFMGDFSQTCEVCHGKRYKQEVLDATIDGYSIADVLNLTVDEGIIFFDKKNDIKSKLQSVSKTGLNYMSLGQPLSTLSGGEIQRVKLGQHLDEEIKNSIFIFDEPTTGLHESDIPILMECFDDLIDQNNTVILIEHNLSIMCEADWIIDVGPGPGLDGGKVQFSGTPKNFIDSSETLTSKHLKRYIKQ
complement(1883373..1883750)       PHAGE_Synech_Syn19_NC_015286: glucose-6-phosphate dehydrogenase; EQW00_09130; phage(gi326783556)     1.03e-06            StaphylococcusepidermidisMQFYYSNCEQNASNLLVINVQPNEGFSLCVNGKKSNQNNEMQKVKLSYTMPIKDKMNTVDAYENLIYDTLIGEQTKFTHWEELKILGNLLMILKMYGNKNSHSFLIMPLDAMGLKKVKNYLVKTD
complement(1883759..1884070)       PHAGE_Synech_S_SM2_NC_015279: glucose-6-phosphate dehydrogenase; EQW00_09135; phage(gi326781985)     1.43e-11            StaphylococcusepidermidisMEPPISRKSSDIRKEKVQVLRSLKCFNPNEIKESFVRGQYDGGMMNNEFVPAYRNEPNVNSQSNTETFVAGKIEIENSKWASVTFYIRTEKRMKKIYPNRYRV
complement(1884080..1884229)       PHAGE_Synech_Syn19_NC_015286: glucose-6-phosphate dehydrogenase; EQW00_09140; phage(gi326783556)     1.65e-12            StaphylococcusepidermidisMFEPLWNNKYISNIQATSSETISIEYRGGYYESSGALKFMVQNHLLQMV
complement(1884236..1884430)       PHAGE_Synech_S_SSM5_NC_015289: glucose-6-phosphate dehydrogenase; EQW00_09145; phage(gi326784327)     5.84e-13            StaphylococcusepidermidisMKESGLTNVKGLMRIIIEKPFGDDLKSAKKLNNQISKSFKEEEIFGIGHYLSKEMIQNIERLRF
complement(1884427..1884741)       glucose-6-phosphate dehydrogenase; EQW00_09150                                       N/A                 StaphylococcusepidermidisMYNLFQKGYFENSLTIIGSGLNELTTDEFREKVKNAIQNNIENSKEIGAFLKRLFYKQQDANSKDSYQKFLEMSLELDDKFDLKENRLFYLAMSPKFLELQQTT
1884833..1885036                   PHAGE_Staphy_SPbeta_like_NC_029119: hypothetical protein; EQW00_09155; phage(gi985761153)     3.99e-13            StaphylococcusepidermidisMKAAEFSTKEIMKELNIRNRTQVKSWWLWYQNEESMFVLYLYPQSLIICLSLHFSTNQCYNLDNEND

#### region 3 ####
2391319..2391332                   attL                                                                                 N/A                 TTTATTATTATCAA
2391858..2392475                   PHAGE_Lister_A500_NC_009810: gp32; EQW00_11750; phage(gi157324991)                   2.36e-09            StaphylococcusepidermidisMEEKFNNSQEERQFQQFQEYQKRQEEEKKKKRKKGWLFGCGGCLVLLILIIVGVTACTGTFVNEVDKEINEEGKLDKDKDTKIKSIGETTEIDGVSFTLDNASYTEERNEFADVQADKVIKVDMTVKNNSKEEIPVGGDIKVYVDGKQAKSYPIDNQLIDSLSPNREISGSEGFAINGNPKKIELEFQPLTSFSNKRYIYNIKPE
2392585..2393139                   PHAGE_Staphy_StauST398_4_NC_023499: putative lipoprotein; EQW00_11755; phage(gi588498244)     4.68e-12            StaphylococcusepidermidisMKRLLGTLIAATLVLSACSQNDTKEDENKKSENTTEKKSDDKKDKKTNEDKKSGEQKKSQEKKNNKSMQESATNEQVQSQQQTNNNQQQYSDEYLANNSVSNDDQLSSEEQQKYNENTNENKQNSHVDLNSLPATDFRTDWMSESGQKQVNDLANQKDSGQISQYEFNDRVSDVMNNEIDNQQP
2393241..2393444                   PHAGE_Staphy_phi7401PVL_NC_020199: integrase; EQW00_11760; phage(gi448244643)        3.65e-06            StaphylococcusepidermidisMRSTKTLSQTNDDVLAWYLIKNGKQSQKEAQKRLNELIEAKLNDKTPTTLKSLTFHDHLMSGLKDTN
2393600..2393848                   PHAGE_Staphy_PT1028_NC_007045: ORF002; EQW00_11765; phage(gi66395166)                1.11e-06            StaphylococcusepidermidisMVKDDLSIIKNILRYTQKKYNITDKSYIDDVIVPKKATTIEEVKAKRENYLEMNEVHLIAEELKHIANNKRASYIFIYCLYH
2393868..2394395                   PHAGE_Staphy_PT1028_NC_007045: ORF002; EQW00_11770; phage(gi66395166)                1.92e-63            StaphylococcusepidermidisMRIGELLAIQPENIDFKNKKLIIDGTIHWRKEGNNLGFKDTTKTALSYRTISLTTRSCDILRKVMLENKKAFQWKNMYVDRDFIFTNHKGNPISLTSINRNIQIAAKNVGIKKHITSHTMRHSHISLLSQLGISLRAIMDRVGHTDHKTTLQIYSHVTEQMDKDMMSKLEKVGIN
2394398..2395303                   PHAGE_Strept_phiARI0131_1_NC_031901: DNA topoisomerase II large subunit; EQW00_11775; phage(gi100005)     9.30e-08            StaphylococcusepidermidisMSSTRKPKLDYEEQIKKLKSLGILFNEITEEEAKEILKNNTYFFKLISFRKNIKKDSSGNYNFEFSALSDFATLDMRLRYTLLPMCLDIEHSLKTDILKKITDDVNEDGYTIVQDFINNHNGDLEKIFSSVIKRDGTVIPSFQKYYDDPPIWVCLELMTFGQFSAFVEFYSERTNDSELRKAGKFIKFAKNIRNKCAHSQPILLNLNPRKNFTVERELKKIGRKQRLSDKNLKVLAIIDILALLVLHSKYCSKGIKDNRKNDLLTFKQRKNRYFHHYRNVPSLSFFFLSLNKMIDYYVQNN
complement(2395544..2397085)       glutamine-hydrolyzing GMP synthase; EQW00_11780                                      N/A                 StaphylococcusepidermidisMEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKATINAKSDELFFGLPSEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIRQQVGNRKVLCAMSGGVDSSVVAVLLHKAIGEQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLERDIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
complement(2397252..2398718)       PHAGE_Staphy_42E_NC_007052: ORF012; EQW00_11785; phage(gi66395520)                   1.42e-43            StaphylococcusepidermidisMWENKFAKESLTFDDVLLIPAASDVLPSDVDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFSIKISDVMTKDNLITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPYAAKDEHGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVINQVKHIKETYPEITVVAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKTPRKFVPEGIEGRTAYKGPLQDTIYQLMGGVRAGMGYTGSENLKKLREEAQFTRMGPAGLAESHPHNVQITKESPNYSF
2413402..2413415                   attR                                                                                 N/A                 TTTATTATTATCAA
