gi|00000000|ref|CP035319.1|  Rhodococcus sp. ABRD24 chromosome, complete genome. 5098030, gc%: 66.42%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(297246..299984)         PHAGE_Clostr_phi8074_B1_NC_019924: putative DNA-directed DNA polymerase A; ERC79_01255; phage(gi431810385)     5.72e-52            RhodococcusspABRD24MSPATASSSTTPAPVDASGSERPTLLLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHVAAAFDVSRQTFRAEAFPEYKANRSKAPDEFKGQVEITKDVLVAMGIPVMAIEGFEADDIIATITTQATELGYRVLVVTGDRDSLQLVTDDVTVLYPRKGVSDLTRFTPAAVEEKYGLTPRQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLDELVNQVDKVKGKVGDSLRANLSSVVLNRQLTEMVRDVALPYTPDQLVLAPWDRERIHALFDDLEFKVLRDRLFATLSSAEPEAEEGFEVRGRALAPGELTAWLAEHASTGERHGLSVVGTRSPYGGDVTALAIAASDGEGAYIATTSASPEDEAALATWLADPSQPKALHEAKWAMHALRGRGWTLAGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKRELRVEESGQQQLSLLDEEDVADAEIAEGEILRARAVVDLAAALDTELADIEATGLLADMELPLLAVLAELEATGIAVDTDHLQDLQSTFAARVAAAADAAYEVIGKQINLGSPKQLQVVLFDELDMPKTKKTKTGYTTDADALQTLFEKTQHPFLEHLLAHRDATRLKVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGQGFETLLTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAFGLASQLKISTEEAKQQMDAYFARFGGVRDYLHEVVEQARKVGYTETLFGRRRYLPDLNSDNRQRREVAERAALNAPIQGSAADIIKVAMIDVQRSLHDAGLESRTLLQVHDELVLEVATGEREQVESLVREKMASAIELSVPLEVSVGTGRSWDAAAH
complement(300067..300687)         response regulator; ERC79_01260                                                      N/A                 RhodococcusspABRD24MNAAAAQGTERQPRRVVVAEDEALIRLDLVEMLREEGYDVVGEAGDGQRAVELAEELRPDLVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSKADLVPAVELAASRFTEISLLEREVANLSDRLETRKIIERAKGLLMQSQNLSEPEAFKWIQRAAMDGRTTMKAVAEVVLDTIGGSASGD
300798..300874                     tRNA                                                                                 N/A                 GCCCTCGTATCCCAATTGGCAGAGGAAACGGATTCAAAACCCGTGCAGTGTGAGTTCGAGTCTCACCGAGGGCACCA
300848..300861                     attL                                                                                 N/A                 TGAGTTCGAGTCTC
complement(300912..302036)         PHAGE_Mycoba_Gaia_NC_026590: integrase; ERC79_01270; phage(gi764160134)              1.51e-44            RhodococcusspABRD24MASIGSYQTSGGVTRYEVRYRGPDHRTTRKRGFKTKRDANAFAARVEVDKQTGACVAQSAGRVTVGELGEQWLGRQAHLKPSSARVVKSAWRNHVEPKWGQEPVGRVKRTAVAQWVADLSKDRGPVTVTRAFGVLAAILDDALADRLVAVNPARGIPLPKRTKAEQQYLTIDQLHALADEAGERRALVLLLGLCGLRFGETAGLRVRHLDLLRRRLRVVENAVTVAGRVEVGTPKSHAQRTVALPRAVSDVLARQCEGKSRDDLVFPGPRGSHMTLPSGKSWSAGAVARSHRADANFPEKISVHVLRHTAASLMIAAGANAKAVQSQLGHKSATLTMDRYGHLMRDQLGDLADALDEAVSKMRPQAPGEQAAEA
complement(302036..302752)         PHAGE_Gordon_Ghobes_NC_031028: hypothetical protein; ERC79_01275; phage(gi100048)     1.22e-08            RhodococcusspABRD24METQTNTQTLSEIIGMNAREIRLSTGASLERLSFAARAHGLNWSTGRVGDLESGRVQATLPTLFALAASLSQLAGRSITFKELLRPDDWRGSVEINEKFVVAQDDFVAILGTGSIRADRDEKIETAEQHMAHATVTDLVRAHGWPNKADALRDLNLPDEEKLVEVLVAVEKAALADRRAAKALGVSLPELMIASLRRWGKPLSDRREELAGTDATNQHRGQITRDLYAALRVELGQAD
302848..303036                     PHAGE_Pseudo_PPpW_3_NC_023006: hypothetical protein; ERC79_01280; phage(gi564292511)     7.48e-05            RhodococcusspABRD24MPELLTPTEAAEILRTTTRALAALRHRGGGPKFHKLGRRVPYSPDALTEYVAANSFQGTADY
303263..303502                     hypothetical protein; ERC79_01285                                                    N/A                 RhodococcusspABRD24MSTDDTTPEEAQETKRRRAIRRAELKAARKAEYWARKLAAAEAAGPEQFARAQREYENARAMSKSVRAAGLSLLPPDPE
303617..304459                     PHAGE_Strept_A25_NC_028697: hypothetical protein; ERC79_01290; phage(gi966201379)     4.94e-12            RhodococcusspABRD24MNDTPQTTLRPPGRIRRSSEVNRPTAPVRDHILEQALAYVRAGLPVLPLRGKAPITSRGVYDASLDEDQLRQWWSRGNWNVGVAVPEGLVVLDVDPRNGGTDAAQLLTLRLGGLPDTLRARTGGGGWHVWLRIQALSGDLRSSLGDGIDVKRFGGYVVMPPSIHPNTGRPYAWHTVAAPATAPATWDRELRKPTSNTRPAKGHLRLATGGDYSASLERLANTTEGGRGNALFAVGASMRDDGQLHAENESRLFEVARHAGLDDAEITKTIESVKRGNGKR
304456..305604                     PHAGE_Entero_EFC_1_NC_025453: primase2; ERC79_01295; phage(gi725950538)              2.11e-08            RhodococcusspABRD24MTAAQATGEVVEIPFVGPPLAPEDAVSNEVQHAVERLRVQQAARELFAREQAADTAIPAPISLADLLDTPDDPVQYRMEELWPKGGRVVFAASKKSGKTTATGNAIRCLADGGQFLGRFQTEQVRRVTLIDNELDPRMLKRWLRDHGIHATERVQVVTLRGHISSFNILEPQTRARWAQRLRGSDVVILDCLRPVLDALGLDENREAGRFLVAFDELLDDAEVDEAMVVHHMGHSGERSRGDSRIVDWPDALWKIVREDPDDDSSARYFSAFGRDVEVHEGMLDYNPATRELTLDDVSRKAVQDERRAEQKAQKHAQREKDTRAVIAVVREAMRKNGGVLSGRAAEKAVRSAGLKVTNGDGPRLVEAARNGSDGHEWGEDEY
306376..307341                     hypothetical protein; ERC79_01300                                                    N/A                 RhodococcusspABRD24MFDAELADETATDRRARVALAAKVCARCPVFAGCDTAATQAGRPSGVWAGQLRLITRPPRPRHERSSHERELPPDRLPCHHSRSGWPGSPDGSAVPVHRSGCPGTPPGCPHRMGGRDRQARGRARSGRLGAARLARKSRRRRPGDRGSTDSRPRRPHPHDPGTVAGRSPVAADRPLPGDAGGRAPGQGGGRRGRRVRGQPAGDHGLERSAGRKRRSGSARRTPDPFGGPETPNLALECLRWPGRHPNEHLGSRGVRPLGGGPDRRSARALDPAGSPCALRDRGGCSRDPESAVIAKCTEPRCAYLTRDGRCPLHLDEENRR
307338..307565                     hypothetical protein; ERC79_01305                                                    N/A                 RhodococcusspABRD24MIDETPFDYELPELFADELLHLDPVATCAAVELYGPSARASVAYDRTGRRVDGLPVDDSWFAPADLAGTRPEADQ
307585..307977                     DNA-binding protein; ERC79_01310                                                     N/A                 RhodococcusspABRD24MTARVAGVLLDEADTRLVVGVLDTLAVLTRQRGQRLRPDVVALRKRLTDAAAAPDVSASEPVPDSLFHSVYDTERSYEDTRSAARMLGITPHGVRHLLRTGRLEGHRHAGTWYVDRDSLIERTRQCRLPS
308231..308833                     PHAGE_Mycoba_32HC_NC_023602: capsid protein; ERC79_01315; phage(gi589893337)         4.30e-24            RhodococcusspABRD24MGYDLAELEDFGGKFEVTDEERTRNQTDVVDQRTTQLANSILRSLDRRALAAVDAALDGLDGGVGVVFGSNWSAIERNGDPTSQTPTPDRFEANLADVQLAFDIDDLGLTFDTLVMNPTQKAAVATAYGKDLADVLAAFETKIVASGGRRSFSRTSFPRSRRTTRTRSRRSPDWRADRERARDQQAGFRRGRGRAGHPRT
310996..311009                     attR                                                                                 N/A                 TGAGTTCGAGTCTC

#### region 2 ####
588404..588415                     attL                                                                                 N/A                 CGAGGTCGAACT
complement(601874..603001)         PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; ERC79_02570; phage(gi326781942)     3.17e-33            RhodococcusspABRD24MKTKGALLWGINEKWSIEEIELGDPVAGEVQIRMEAAGMCHSDHHIVTGATPMPSYPAMGGHEGAGVITKVGEGVKDLEVGDHVVLSFIPACGRCPSCSSGHSNLCDLGMGLLSGQAIADGTHRIQARGQNVIPMCLLGTFSPYMTVHESQAVKIEKDIPFELAALVGCGVPTGWGSATNVADVKAGDSVAIIGIGGVGMSALQGAVASGARHVFAIDPVPFKREQALKFGATHAFASMEEAIAPIMEITWGRMCQKTIITVGEMKGEYVDPALTLTAKNGRCVITAMGHMADMDVKLNSFLFAMLQKDLQGNIFGGCNARVDIPNLLNLYRAGLLNLEDMITNTYSLEQVNDGYRDMLDGKNIRGVVRYTEADW
complement(603257..603790)         exonuclease SbcC; ERC79_02575                                                        N/A                 RhodococcusspABRD24MPTERDPIELSEQELRDIAGYAADCARRVLSLFEQNRPDDTRPRDAIDAARAFADGDRRTNALRRSAWGALEAAREATSPAAADAARAASHAAAAAFLHPLASAHQVKHILGSAAHAARAEELASGDERSAGAASLEWAGRHAPSAVTAVLGRLPAAPPGGGRVGELMRNLASSLRA
604157..605335                     hypothetical protein; ERC79_02580                                                    N/A                 RhodococcusspABRD24MGKSGKRNRRARKPVTTTNLHISVANASSNRAFNLRDEIRQSQAALLYADSVTLISPRANLIHSVAAIEDAKDLEMFQLLLDVAPHYAPDAVPQLQEFLHLVQSAPPDSRRAQLQRMAVRLRPISTVIQDRVRDQLSESAYSELKLAMRAGLLTIDSLPGADVRDLGDEEIAERYFARIQETLTSGNTYPLFDHATSNLVALGVEAGVLAPVPAARRNGRDAALASGLFDQLPNFEHASMSEVLDIRDELRNPLQRFRQGIREISKDIETVPESPEFAHEVADAWTHRVAPALAEIEDAITENTSLRDLVRRGIQDPAGLSGIGGLAGLVVAAGPASGAASAAALFLSSTVATTGLGVASIRATMAQRAATKEATEAQFYFLYGANSRMGSN
complement(605534..606007)         PHAGE_Gordon_Schwabeltier_NC_031255: hypothetical protein; ERC79_02585; phage(gi100004)     7.12e-09            RhodococcusspABRD24MADTTTATETTLSAELWGRLTEALGLAADTAAETVVVAVEELTIAPGSENAVAAAAVLASAGRNALDQLKADAEQGRVLAAAARKRDITDLLTDSMRRGKIPPSREKHWFNLIEADPTMADTLASIPDNTIPMKEIGYGTGDDFGDNDVVETAPWFR
complement(606000..606521)         PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; ERC79_02590; phage(gi372449828)     2.07e-09            RhodococcusspABRD24MPTRTVAHALARWTDPDGTPRLATHGQTIDVDEATAAELDAIGATETTTEVVMTSVAAEGSREDKRARIAEALKAEPHLSNRRHAEEIGVDHKTVGSIRKALEEAGEIPHASAAAPMPAAEQARRPRMTATTEKWVAYAKDRGIDPTDAESYTKDQLIAAVNQLDEKEQQHHG
complement(606524..607408)         PHAGE_Gordon_Schwabeltier_NC_031255: hypothetical protein; ERC79_02595; phage(gi100006)     2.53e-77            RhodococcusspABRD24MTYSLLPDLQGRRLTVDVALQQPTILRNRIAELADPQLVLDKFFTSSGQKVEGGGILFSIIKASDFYTANDVEKRGPGREYAVVEGVDLEPKLATVDDWGGKFQILDEQINRNDVSYIDQQTTQLTNTIVRKLNDAALAAIEEHIGAENTLAGHNWSNVVTVGPEADLTPNSERPSADLSAAQLAATMQELGVVHDLLVMHPTQEHALNVAYGDKLAAMLESAGVSKFVTPRVQPGVAYALKKSEAGVVGFETPLTVESYDDRATRSKWVQAYAVPAFAVEKPYAVKKLTGLAG
complement(607423..607794)         PHAGE_Gordon_Schwabeltier_NC_031255: hypothetical protein; ERC79_02600; phage(gi100005)     4.11e-35            RhodococcusspABRD24MNQIDVYNPGRDLTAVATDAITAKRFVRISGNRSSSGNLSVAHATAGGRVAGVAADDAAKDAIALVVRGHSRVVKVTAGGSIAAFAEVEVGPDGKAITADTGHVVGYAVTAAIPGSDAHISLL
complement(607791..608417)         PHAGE_Gordon_Schwabeltier_NC_031255: hypothetical protein; ERC79_02605; phage(gi100004)     2.81e-42            RhodococcusspABRD24MNADLRTIPGVELVKTGTWEVSTGTWNVTPELLAAAKAAHDSGSVPKPIVKLGHIDSRFDGEPALGWVDNLEIRDDGNTLVGDLVGVPAWLASIAASAYPNRSVEAVHDLELSDGTTHALALTAVALLGVTKPGIPALTSLSDVRELYDVAASAGTPVTLTVVHASERTSTLHTLPPRERVRVRVAAARRRRRTADYLLATLTESETP
complement(608439..608693)         DNA-binding protein; ERC79_02610                                                     N/A                 RhodococcusspABRD24MRRIQSDLVAACVSQTDASARKLAEQSASSPLLGHEFVDTITAAEVLGCSPANVRYLVRRGTLPGRRVGNRWLVSADAVHARTA
complement(608809..609066)         hypothetical protein; ERC79_02615                                                    N/A                 RhodococcusspABRD24MIDETPDQAKYHRRAAALVVHMLDDNDDGIRAVMMDTLEEGEYSIVRLPMAVVTLLTDEFPHLLGRVGNLRERLLGYARIEASGD
complement(609425..609772)         hypothetical protein; ERC79_02620                                                    N/A                 RhodococcusspABRD24MTTKRHLTTVTTTITTNHQALDTRAASAPWVELPDDAAHPTFDDAPRFLIGRHTIQLHHDVHDEYEDVTVTATHVLNGLTGEQIELGPWSLTASDARELANSLHHLAATIDAVGA
complement(610261..610662)         hypothetical protein; ERC79_02625                                                    N/A                 RhodococcusspABRD24MTAQPVDEWVEGPQPAATFEWQRIIRRLSDEAIQADRVKGSTVKLVAVMLATYADPDGSRVYPSDARLSRVCLLSLSSTNRAKNWLVANGFLQMSKQGNRYTGQANEYRLTLPVNLLELKLLNPNEDHAEGMA
complement(610880..611314)         hypothetical protein; ERC79_02630                                                    N/A                 RhodococcusspABRD24MTVSNITALAQWNTLDGRIDSIAADNVVPDHRKPAWCDEITYVGSTATSATMLSAPAAVALRRHPGVVSDSKGKIEPALAYVDIRQHAGAREPYIHVERWAAVNGTHALISGSDYGLTIDEAEELAYTLTLAVAAAREALGGQV
complement(611416..611613)         PHAGE_Entero_Arya_NC_031048: hypothetical protein; ERC79_02635; phage(gi100039)      6.41e-05            RhodococcusspABRD24MQTSEDYWLSREEVAGRIKLPVKTLAQWASQGKGPRFSKIGRFARYKMSDLIAWEDAQATRGGGD
611720..612346                     DNA-binding protein; ERC79_02640                                                     N/A                 RhodococcusspABRD24MTQQQWAEEQAQRIAQTVKDLRGKRSGQWLSDRTAEAGHRISRSTIADLESGRRKYVTTAELSVLAWALQIPPISLLYPALPDGEVELVPGNRVSSITAATWFSGETTFQPDLFASDGEPLPEDERLRNLEQVRAVEDGARLVYLSRERIKTESEIDRLTRVAARMRTAGSDEVATQMFSEVNAKQHYLDYLSQELKKTPGAVVSDGG
611971..611982                     attR                                                                                 N/A                 CGAGGTCGAACT
612336..613508                     PHAGE_Gordon_BetterKatz_NC_031247: hypothetical protein; ERC79_02645; phage(gi100039)     1.15e-38            RhodococcusspABRD24MAGRPPLRIGQHGKIGRIDQGGGVWLARCRFRDDDGVVRIVERRSPAGRRDQYGKLAEEELRDALDARRTPTEDEIDRDTLVLSLCRTHLRRLEEEGRSAATMSTYEFALGKLEPRIAGIRVGEASPGRVDAALRAMVKAHGPTMARQSKTILRGALAMAVLGGALDTNPVGEVSQIRSKNPPKGARALTGDELRVLVTAVQESDYCLANDIADPILLLIATGVRRSELLAIRWQDIDDEAGTVSISGKVVRVKGQGLVRVEAAKTAAGLRTIPLPRFALDMLEKRAAQPRLGDLGVVFPSTAGTLRDPNNFGKQWRKVRDDLGVAETTTHTFRKSVATLIDDEGLSARIGADHLGHRHVSMTQDKYMTRGRQHTVVADLLDRTVAISDE
