gi|00000000|ref|CP035368.1|  Haemophilus parainfluenzae strain LC_1315_18 chromosome, complete 2067358, gc%: 39.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(768713..769648)         PHAGE_Edward_PEi20_NC_028683: hypothetical protein; ERO09_03695; phage(gi966200120)     5.14e-27            HaemophilusparainfluenzaeMNYLQIARETLSVESQALAQLSQRLDDEFSQVVDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARHFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPITTPDTSFTDCLTIMNEGRMGVALVMENQQLKGIITDGDVRRALTANGTDTLNKTAKELMTSSPKTIHENEFLAKAEDLMKEKKIHSLVVVNDENNVVGLVEFSS
complement(770237..771304)         PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; ERO09_03705; phage(gi9630142)     1.13e-16            HaemophilusparainfluenzaeMNSTRKIIHIDMDCFYASVEIRENPTLQGKPVAVGGSSRQRGVLTTCNYEARKFGLHSAMPTAQAIKKCPSLILVPVNMPLYKKVSAQIHQIFQRYTSIIEPLSLDEAYLDVTDCTQCSGSATWIAQEIRQAIFDELKLTASAGVAPLKFLAKIASDMNKPNGQFVIKPHEVEQFVKTLPLKKIPGVGKVTSERLLKMGLETCEDVQKLDQSILLNIFGKMGKRIWDFSHGIDDREIQAHRERKSIGVERTLSENVRHLEQGIALLDNLYTELIRRIERSAPNIPLTAFRKIGVKLKFEDFQVTTLEKTGLPLSLKSFQQLLEQIWQRSQGKSIRLVGLHVNLPEESHLEQMSLW
complement(771413..771901)         hypothetical protein; ERO09_03710                                                    N/A                 HaemophilusparainfluenzaeMKTLKSLTALSLGALCLAFNTQVIAKEATPAKATQQVTKADDKIDQYLAINVGKREMVVDEKGQALSAFKHEITNIGEKPIQNIQWVGVYVNNREVIYSQDMQINLENPLQPGQSLDINLQIPFVQLSENARKAFMNQQEKIDVYTIERIVKFSDKTILSDR
772009..772374                     tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTAGCGAAGCCCAAGGTGCACGTCGAGGTGCGGTAGGCCTCGTAAATAAACCGCAAAAAAATAGTCGCAAACGACGAACAATACGCTTTAGCAGCTTAATAACCTGCTCATAGCCTTCGCTCCCCAGCTTCCGCTCGTAAGACGGGGATAAAGCGGAGTCAAACCAAAACGAGATCGTGTGGAAGCCGCTGTTTGAGGATCGAAGCACTAAATTGAATCAAACTAGCTTAAGTTTAGCGTGTCTGTCCGCATGCTTAAGTGAAATTAAAGACGAGACTAAACGTGTAGTACTGAAGGTAGAGTAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
772361..772375                     attL                                                                                 N/A                 CGCCAGCTCCACCAC
772530..773861                     PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; ERO09_03720; phage(gi16130540)     1.28e-61            HaemophilusparainfluenzaeMRKILLPFYEIPTMAKIIKQLTIAQVNNAKAAEKIYYLFDGEGLKLVVKPNGVKTWVFNYKRPYTLKRTEKTIGTFPAVSLKDARQKALEFRQLLANKIDPHEFERKQAIDALKEQQSTFAHVANEWLLYRAKIGKEQGNYTEKTRIDTERRVNAAIDLIGDVPFKELTLKHGLSVLEPYRQSGATAELKKRYLVLKSIAEYAERFEYWENNKWKYLGDDLPAVNKNKHHPSIHYKSLPEFMISLARANISQTVRLAILWGLLNATRASETVSAKYSDIIEHEHLPNGKVWKVEISKGGKGERLHLVPLSKQAETLLSYIKQHTSKEYLFPSTLSKSRNEKHINSQTPNEVIKTMDGGKYKGAMTNHGIRSLFSSYCNDNRLELGLDKEVIEICLSHLNSDEIRNAYNRAEYLPYRLKTFQEWANYVEKCANGLFKEIIADKS
complement(773842..774009)         PHAGE_Bacill_AP50_NC_011523: truncated MerR-like protein; ERO09_03725; phage(gi211956447)     2.76e-05            HaemophilusparainfluenzaeMERYFSIKEIVQTGICSEATVKRWIASGKLKSYKFGRSRKIAESDLNEYIKTCRQ
complement(774009..774524)         PHAGE_Haemop_HP1_NC_001697: putative DNA binding protein; ERO09_03730; phage(gi9628616)     1.56e-34            HaemophilusparainfluenzaeMTTLTKLIKNIENWAEARNLIEGSTPKKQFIKLMEEFGELCSGVSKNKIDVVKDSIGDCFVVMVILARQFNQNDLLDDMGYIYEHPNFNGDGQLERSLIDTADSFLSFFFESENRELFKAKISFGFCILGLKEAADYFKLDFDECVKAAWDEIKDRKGRMIDGVFVKEGDL
complement(774545..775030)         hypothetical protein; ERO09_03735                                                    N/A                 HaemophilusparainfluenzaeMRPEVFATHSEPINKTAYFTVYRPNLGYREDARIERCDELGDILFAINKINHELRKINVEHKRNFKKIQNLDLSDRDKKLLMVAMADEHKKLKQPYIDRLSELAKEKDVIKEKMGIIGQAKEKLSFHSILIHELFRFLTKEQGDIALERTRERCRELKIQY
complement(775047..777245)         PHAGE_Mannhe_phiMHaA1_NC_008201: replication protein A; ERO09_03740; phage(gi109289978)     1.30e-98            HaemophilusparainfluenzaeMMNWEQQRDNNIAKRDLAMEEARLARIESAVKTHRTLDLPQATAAQMELFAVAPNHFDYVEKLLSDLPRKRQREHFRNVWLRAYRSVKDDGSISFSLGNKQARIANTTLRDVLTNRLEAVFEQYRISVSWLLERKHYSANLAMQKPVDSQGLHFYLLGERQLKEIAYKLALHFNGLQSDFVEDCANQKAVGLLSAVDFSRLSSELHRLCADVCKNIGFPLKSQHRLEEGKRLSVQQQEGELLRVVCEKYWFRTLRSTQKRLIEHLAIGCGEVSAKVSPYISTGALSDYRNQQKANLEYLKQMIIENIDDPSDQVELMAMWQKSSGNPAIRFNEMMNRLRGVDEWATEKGYVSLFLTMTAPSSFHATHNNGTNNNKWKGADPRTTHAYLSKNWAQLRALFAKRGIGFFGMRGVEPHHDATPHWHLLVYVEAEDKEEVIRLFKSKALELDGDEFGAKKHRCRVDEIDPAKGSAVSYIAKYIAKNIYAGNQKDETSDEVEGLKLDENVQRVRAWANLWGIRQFQFYGNPPISVWRELRKLEKWQLDDVDDKTIADAQAVCDVACFASYLDLQGGAMAKREDQPLCVEYEESEPNQYGKIRKKIVGVKNRFSLASIRTKLKNWVIKKGIVADVATDANTETTETNKERSDAWTCVSNCNRSEIEQQVKNALLPVGFMINRSQIDLLIKHKRLRINDFQWICYENDHVFIKEEKIPLFSVKKFSQKVTGFWERLGKM
complement(777253..777561)         hypothetical protein; ERO09_03745                                                    N/A                 HaemophilusparainfluenzaeMSTDIYINLDCGAELQITKIGDRFQVLEIVSDSDSWRKQKARVIGRLHNTIIGAVNEVRNFALAQYEVLSLTEMESAINSTNQAIKDYFDQHNEYLANLQRA
complement(777551..777811)         hypothetical protein; ERO09_03750                                                    N/A                 HaemophilusparainfluenzaeMATVILSRGALSIVAKEYYQKLDKAQEKLFAYIYHLDKGDEEQAKQAFNEFIENGDLATKARQIFLQKYRDWEQWQANPRRKQNEY
complement(777820..778182)         PHAGE_Haemop_HP2_NC_003315: hypothetical protein; ERO09_03755; phage(gi17981821)     1.05e-15            HaemophilusparainfluenzaeMYVSGNESAAEKFCKENQIAVEPVQSWGDCRHVIGKSRYRVEYAFSNLLQGEREILLAMAELDINDLVSTTFSGEKLHHFTVNGRRKIGRAFRFKVRELSKKFPEGITEREFTLIDKALN
complement(778198..778458)         hypothetical protein; ERO09_03760                                                    N/A                 HaemophilusparainfluenzaeMSRKNYVYDNGKTRKGRVNVYQLEKRVKKLEAQIQIISRHVNHQAGLNQQQVLLNESLHDRVALLEKASWNKQGMFGRWLSRIQGK
complement(778552..778800)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; ERO09_03765; phage(gi109289973)     3.65e-07            HaemophilusparainfluenzaeMKVNVKCPKCGSENIYVRTSERLSKLTTQTFGYCSGCRECRFKVISEIVEVETASFETNQQAMLGSKPLDETDTRQVEIPTN
complement(778812..779285)         hypothetical protein; ERO09_03770                                                    N/A                 HaemophilusparainfluenzaeMDVSLLPVQGNSNECDKQVPCGLSTSQTLLLDRLAKWSAYKNAGLAYCNTLLEQGFAADKTLYYLACPEKFVEVSQVLDQLCSDYRDEMGHLRSNPLDTPLFTALSYYAGTLATYSIQLIVALEKFKHNTESIKWETNENVFADVMEIVRRYQPIKK
complement(779464..779787)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; ERO09_03775; phage(gi109289972)     1.35e-06            HaemophilusparainfluenzaeMCETAIQASGKFLLRKTKDGKYRLSFTLFDNGSTSVEHLQARQILLQSFLLDLHQEKNCLDVGHVCIRNTDEVLAAARQFYDARKAQESAQVRECVGDFVNFLRSIR
complement(780203..780400)         hypothetical protein; ERO09_03780                                                    N/A                 HaemophilusparainfluenzaeMAKKVDEQLWVRVLELEQALKEQEKQTKQRIDELGQQYHDHHNHLPALCFICAVIGTFCAFQFFR
780435..780677                     hypothetical protein; ERO09_03785                                                    N/A                 HaemophilusparainfluenzaeMTDETLVIPIDVDSPLNITFHAETGEMTVECFQFVSGAPQAKMTFRYTPQATQEMLRALAIFQEKLGTTFLTQATPHNVQ
780823..781473                     PHAGE_Mannhe_phiMHaA1_NC_008201: CI repressor; ERO09_03790; phage(gi109289970)       3.11e-32            HaemophilusparainfluenzaeMKEISQSSTDSDLAMLLGVQKSSISAYKNRGIPKDKLIIFSQKYNVDLNWLENGENNDGFDSVRVVNLHEPQPTDRIRIEVLNVEASAGNGTFLTRTEQGLLAQEFDLDFFRRQFGRTDAKNLKIIAVKGDSMAPTLESGDLLYVDVSENYFSADGLYVFTFDDHTFIKRLQKRGREMWAISDNKEEYKEWEIKQDDPVYIHGRVVFSLPMKMKKW
781586..782305                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; ERO09_03795; phage(gi109289969)     1.53e-12            HaemophilusparainfluenzaeMIIGWLATGLFYAFATTEHYFIAFVAFALSIGVFGKGDELKKQKETKTSDVSSSASILSFESNSLDSSNSRFRTQGKNIIEFTYTNADGDTKHREVRVDYTDDVYIEGYCYVAGDNRTFRLDRIDGLIEQNGEFYTVDEWLEQRGIRKNQYQSKLSSKSTSSQLEICFTGFSKIDREYLETLAEIHDFKVRKTVTKNLNFLIMGDNAGPTKINSAIDVGATLLDENEFKTMIETGEIPQ
782302..782532                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; ERO09_03800; phage(gi109289967)     7.35e-14            HaemophilusparainfluenzaeMKKLLLILTALSFVFPTATFAKSKKADAEQFSCSDGKRTCKDMDNCDDAKFHLRECGMHKLDRDHDGVPCENVCRK
782535..783203                     hypothetical protein; ERO09_03805                                                    N/A                 HaemophilusparainfluenzaeMDSIKTLNGNIIGYSLPSNIAALQKNIVKVQNFSGTDSFNLLPPIPELLNIKELTAFHTFSNELIGFSLPPEIKKIQDVLVQLKTALNIDDVASEDAFNSLLINIKNLEQIEDDQAHSFKEALDSLLLAIYQIYQNNQKAISVLIPVLYCILDFAGGKVLEYIFDDHQQEQMIEMIEQQQEELKELKEQNNVILDEIKSLKSQASEEKDDKQPAKVTSMDVI
783237..783509                     hypothetical protein; ERO09_03810                                                    N/A                 HaemophilusparainfluenzaeMTNNDLLNLYNLEKSSYDSYGTWRTSLLLGWVFNLIINISSHFYDSKHGMVIFVISNFALFVVFVILTVQREQAKKRVSQIMKMLLNKNP
complement(783532..784725)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein; ERO09_03815; phage(gi109289965)       1.85e-135           HaemophilusparainfluenzaeMFDLNLNDNHRTPAFKVQITTKDKKQQDITQVISSRLISLSLTDNRGLEADTLDLELSDHDGKLALPPRNATISLALGWKGKPLIDKGQYSVDEVQFSGGAGSADRLTIRARAADLKGSFSEQKERSFDKKTLGEIIDTIAKENQLKSQCEKKLANTFIAHIDQTNESDINLLSRLAEEHGAMCTVKNGTLLFMPLGQGKTATGKPIPLRKITRKSGDNYNFSIAESENYKAVRAYWHDTDTGKRGEITVDENTKIVKKQRMTKGRTLKNGTVKGRRLSKRKYNTIEQQEPITSDNAQIKSLRHTYANERTAINAAKSAFDKLKRGVATFSLNLAFGEPDLIPETPIELSGFKAEIDATNWLITRVTHNLSDGGFTSHIECELKVEEDEVEVKKEKK
complement(784725..785162)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein U; ERO09_03820; phage(gi109289964)     3.49e-54            HaemophilusparainfluenzaeMFQNFALATLGMFVFTRQTIPFQSLDRTSNWRHPTNAIVGAMPKSQFTGKESETITISGRLIPEITGGRFSIKTLELMADSGGAFPLIDGATFEIIGFFVIESVQETRTEFFGDGAPRAIDFSMSLKRTDDPMLIAIAESLMSSL
complement(785491..785637)         PHAGE_Escher_pro483_NC_028943: putative tail protein; ERO09_03825; phage(gi971758539)     5.23e-10            HaemophilusparainfluenzaeMIAATVEDAMADIAIIFHWQPQAFEQMTFSELMQWREKARERNETETD
complement(785637..785936)         PHAGE_Salmon_SEN5_NC_028701: tail protein; ERO09_03830; phage(gi966201581)           7.47e-17            HaemophilusparainfluenzaeMKTENTKIITLTNPITRGENQITEITVNKPTVPALKGLKMFDVLQMDVDALQVLLARVTTPVLHKSDFVTMEVADFTELAAAAVGFLGKNSEVEAEATE
complement(786022..786528)         PHAGE_Mannhe_phiMHaA1_NC_008201: major tail tube protein; ERO09_03835; phage(gi109289961)     2.51e-68            HaemophilusparainfluenzaeMALPRKLKLMNFLADGNSYRGQVTEITQPKLAMKLEEYRAGGMFGPVKVNLGVEGLEAQFKMGGYMTELIKEFGGKIDGTALRFAGAYQQDDTEEVVSIELVMRGRFGEIDNGTSKSGDDTEQSYTVPLTYYKIIENGKDLVEIDLINSVFIVGGVDRLAEHRAAIGI
complement(786532..787716)         PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; ERO09_03840; phage(gi169936025)     3.68e-130           HaemophilusparainfluenzaeMSDEYLHGVKVTEIAEALRTLTTSSTAVIGLVATAADADATVFPLNKPTLLTGITAEVQAKAGKQGTLSRALDGIADIVNCKVVVIRVEENEDESTMKANVIGSVDNEGNYTGLKAFLVSAAVCGVKPRIFCIPKYDSQDVTTELLSVAKKLNGFVYASCGSAKTKEEAVTYGRNFSQRELMLIFGDFLSFNPKTKQTEVDYAVVRAAAMRAYQDKEYGWHTSISNKGLTGVEGFTKPLSFDINDSATDVNYLNEQGITCCVYHNGFKFWGLRTRSADKLFIYENYTRTAQVLKDTIAQSFDWAMDKDISVNLVKEIVEAINAKWREYVTQGYLIGGKAFINANLNTAATLKDAKLLVSYKYCPVPPLEQLGFNQYISDEYLVEFAANIAKVGA
complement(787874..788069)         enoyl-CoA hydratase; ERO09_03845                                                     N/A                 HaemophilusparainfluenzaeAKIKAYFMQKDSQNYRLVGSARDCARHQTKTLKIFLQVVFCDCWREWLAISKSTSGDLSKIG
complement(788165..788383)         hypothetical protein; ERO09_03850                                                    N/A                 HaemophilusparainfluenzaeMSKLKIDNGDEYIEKLVAFVSQFYADNPIFTELNLTDEQQNLLMDKLIMPKFKDIYDVSYQALRQSYFKLNG
complement(788434..789279)         PHAGE_Haemop_SuMu_NC_019455: hypothetical protein; ERO09_03855; phage(gi418489077)     1.22e-149           HaemophilusparainfluenzaeMANRNAFKQAPLPFIGQKRMFLKHFETVLNKNIKGDGEGWTIIDTFGGSGLLSHAAKVIKPKAHVIYNDFDGYAERLAHIDDINKLRAELYSVVGNAMQKNKRMTKDCKAECIRIIQNFKGYKDLNCLASWLLFSGQQVATLDDLFQHDFWHCIRQSDYLKADGYLDGVEIVRESFHTLLPKFADNPKALFVLDPPYLCTRQESYKQATYFDLIDFLRLINITRPPYVFFSSTKSEFVRFIEYMVEDKVDNWQTFDNAQRIVVNTSASYSGKYEDNMVYKF
complement(789336..789455)         PHAGE_Escher_D108_NC_013594: Com; ERO09_03860; phage(gi281199699)                    2.14e-06            HaemophilusparainfluenzaeMQSIKAIRCTFCNKLLAKVGTVGYLEIKCPRCKTVNTTC
complement(789630..790118)         PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; ERO09_03865; phage(gi418489075)     1.83e-57            HaemophilusparainfluenzaeMAKVYLAMYKHKRDWRKEPVKAIADRITRFCTKGKYSHCEIAIERIEFGNGYHYEHETVYDCYSSSVQDGGVRCKQIDVSDNTKWDLISLDGVTEAQIKAYFDRTSGKKYDWWGALGIMLGIKQKRSKYFCSEWCFNAICGGENGWRFSPNQLAVMFNKRRI
complement(790111..790866)         PHAGE_Haemop_HP2_NC_003315: tail collar; ERO09_03870; phage(gi17981848)              1.42e-35            HaemophilusparainfluenzaeMTVTFNQDGFAETSGEIIVYCTDNQGIYSHSATEYVSEGGSLSAGSYLDAPPQPKQGFVIVRADKSWQYQADHRGTYYSKETGEKVEHTALGELPDNLTALAPLTTPCKWNGTEWVKDEEKIADNFIKTQTHLIANIDEHAASIYSMWTRFESEYRERQTAAEAFKSASYEGECSRYITDFAQRAGLDNKTATNLILMQAAGLEKLQVELANQRMRKYELKAPGLTLEQIQATYDDIIKQMDNLMEAYQNG
complement(790877..791788)         PROPHAGE_Salmon_Ty2: variable tail fiber protein; ERO09_03875; phage(gi29143754)     5.03e-53            HaemophilusparainfluenzaeMGKITEQLQWEEDIYLIEKQDKVLGGELGVINTQAKQLANRTKYLKGQVDTINRDRTGYAPKISPAFTGIPTAPTAAASTNSAQIATTAFVKTAIAALVGSAPAALDTLEELARALAGDANLKATLLAEIGKKANATDFNALHDLFIGIPIPYPLSTVPTGCLAMNGQRFDKTHYPKLAQKYPSGRLPDLRGEFIRGWDNGRGVDAERGVLSAQLGSPIVQESHSVNNVVSMSGNNLKQIGFDESKLGETPNITVKMTTAEPANRANNWHAAPGTYSNLGVNIQYMGRTRPRNIAYHYICLAE
complement(791789..792355)         PHAGE_Entero_fiAA91_ss_NC_022750: baseplate assembly; ERO09_03880; phage(gi557307599)     1.15e-34            HaemophilusparainfluenzaeMNSYLLPIGSSKLEKQLSNTFSAISEIPVPIRLLWSAENCPINLLPWLAWSLSVDEWDDEWSEESKRQAILNSINIHKHKGTISAIRRVMQSVGYGEVDIIENQSLKTWNGELNFDGSETFEHEEMHWAEYKIVLHQPITIEESKQVRRILNENAPARCHLVAFNFTRAGHRWNGEINFDGNFTFGEV
complement(792348..793262)         PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate assembly protein; ERO09_03885; phage(gi109289956)     1.43e-97            HaemophilusparainfluenzaeMNNIIDLNNLPVPKVVQELSYETLLAQRKAKFLSLQENDDMRQHWQARLQLESEPVVKLLEENAYLELLLRTHINESAKAVMLAYATGSDLDQLGALFGIKRLIIQAEDLNAHPPIPTQYEDDERFRTRIQMSLEGLTTAGSRASYEFHALSTSAKVKDVDVTSPTAGTVKVAILSTEGQGTADSDLINAVKKQLNAEHIRPLTDTVLVESAVILPYEIRATLTLYPSVLESVVMANVNQAITHYTNKQHLLGIDITLSGIYSALHQEGVQNVKLTQPLADLIVQPHQAAYCSQIQLKVGGRDE
complement(793259..793594)         PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate wedge subunit; ERO09_03890; phage(gi109289955)     7.35e-28            HaemophilusparainfluenzaeMNRYTGETLKNESDHIKQSIADILLTPVGSRIQRREYGSLIPMLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARGQYQQHIKENHLLLGHKS
complement(793594..794139)         PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate assembly protein V; ERO09_03895; phage(gi109289954)     4.37e-58            HaemophilusparainfluenzaeMPMSAELQRKLDNIIRFGVIAEVNHATARARVKSGDILTEFLPFITFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSQSPNEHVIEFADGAKITYNQSSGALVVTGIKTASITAANQIDIDCPTINIKGDVNIDGKVTSTGDMTAGGISQINHKHGGVQGGPSKTGKPE
complement(794783..797266)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein T; ERO09_03900; phage(gi109289951)     2.59e-176           HaemophilusparainfluenzaeMNNLQIQIILNSVDKATAPIKAIAGRAEALAEKVKHAQKALSGLDKTKNLAEKFKALRNETNSYAKALDTAKANSKQLQSAVDSNTAKFNSITGKLGNATQQLNKHKEEVIRLKSVYNNMSIPLAKGMGFKSFNDARSSIARQIETQKKAIKDSNEQIKKLKSERKATEQAVKSTTKALDGEKETINKINKEYKPHVEQLKKIQEQLHKAGFSTKHFAQSEKQLSADIEKANNKLAKHQRILALVERAQARFARIKAPISSALNTGRNIAGVGVQASIGGQQIMQPIISMGRGVVGMAQVAGKFEQFQSVLEVTEGSSEKAKKSFDWVKKFAVDTPANLDEAMEAFVRLRAYGMDPTNGLLQTLGDTASAMGKPVMQAVEAIADAVTGENERLKEFGIKGSAIKGTKFIEYTYTDKNGKQQSARVDKNNRKQIEETLKRIWNEKYSGAMEKQSKTLLGIWAKLDDVWASFQMKIMENGAFDWIKDKLQFLLKKFDELEQNGELKKWAKDIGTVINEVIQGLWDFGKTVFEAAKWLAQFASQNKGAIATIVKFTAIAGVALMALAPLLFTLSLVAPVLQVLGSTFLWVGKVAITAILGIGKAMLANPILAVIALIIGALVYLWQNWDEVKAKLIEGWNWLSEQAGQIWQNIVNSVTEKWNVLSAKVGEITNSVGEFFREKWEGITDTAKNFGSNMMNKLKDGVLESFKNVQQAISSTVDWIKEKLGFSKDTEKQIEQTKQNIANVTNNAENNVPNINKWSGGYAGNGGKFEPKGIFHGGEYVMTKEATSRLGVNTLNALNYGKQALIAGGLGISVATAAPVQVDTRAPI
797340..797687                     hypothetical protein; ERO09_03905                                                    N/A                 HaemophilusparainfluenzaeMKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVVFVVPIICLPLYVVLLVLFAGKLSHHDTVVPPSYLK
complement(797688..798149)         PROPHAGE_Salmon_Ty2: putative phage tail protein; ERO09_03910; phage(gi29143749)     6.33e-33            HaemophilusparainfluenzaeMATVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARHLKVRSNGNEVSVGFNSSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS
complement(798149..798619)         PROPHAGE_Salmon_Ty2: putative phage tail protein; ERO09_03915; phage(gi29143748)     5.38e-40            HaemophilusparainfluenzaeMKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMMAYLRTNQPEILENPQIRENAFKFQVDYNNNNTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPTRVKVYLENWDSLIFEGDIV
complement(798585..798848)         hypothetical protein; ERO09_03920                                                    N/A                 HaemophilusparainfluenzaeMRRTILYLAIVASLPCLANTYTVPFRNSAFGRYSNYPDGRITEVCIHQVGYLMTDNGHLTVAVDKDNRPLICRDTQNEKAQPTAQNP
complement(798845..799060)         PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; ERO09_03925; phage(gi109289947)     4.41e-17            HaemophilusparainfluenzaeMTDQFDRAQQLEEMQREIALKKHRTFQAVSRLYCEDCDAPIPEKRRQMIQGVTRCVTCQQRFEMQQRNFRK
complement(799057..799272)         hypothetical protein; ERO09_03930                                                    N/A                 HaemophilusparainfluenzaeMLAACSTATKIIKQPILCPQVAECTPFAATIKTNGDLANAYLQSQQKLSVCIVENQALKKCIDEFNKKEQP
complement(799235..799585)         chemotaxis protein; ERO09_03935                                                      N/A                 HaemophilusparainfluenzaeMFGFLTKKEKYILLVGPLMLVAIILFQGWQANHWRAEAAKEEQLKQQWEASYVALNESVNKFNEQQKALTEAVNQLKISQTKQTQDLKNALKKHQDWADTFIPDDVSGVFNSHENH
complement(799570..800088)         PHAGE_Mannhe_phiMHaA1_NC_008201: endolysin; ERO09_03940; phage(gi109289945)          9.41e-48            HaemophilusparainfluenzaeMIKRSAKYVCAVTAVVGLVIATHGNEIRTSEKGLLLIGNAEGCMQKPYQCPADVLTVGIGTTDAVERINRNKIYTLQEVAELYTKGIKQAEKCVNTYANGQAMPQGGFDALTSITFNVGCGRLKNSTLFKMARKGYSKGMCSQFERWIYANGKPLKGLIERRQKETALCLGS
complement(800081..800302)         PHAGE_Mannhe_phiMHaA1_NC_008201: possible holin; ERO09_03945; phage(gi109289944)     5.27e-07            HaemophilusparainfluenzaeMHDTPSRASYTSGIFAFLIGRIADMFSNVNWADVASVTGIVIGVATFLVNWYYKKKDFELKEKELNQRSHHHD
complement(800304..800513)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail synthesis protein X; ERO09_03950; phage(gi109289943)     5.19e-15            HaemophilusparainfluenzaeMQIYAQQNDNLDAILYRHFGRSEGLLEITCKLNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS
complement(800513..801019)         PHAGE_Mannhe_phiMHaA1_NC_008201: head completion protein L; ERO09_03955; phage(gi109289942)     1.24e-45            HaemophilusparainfluenzaeMSNGAISVKLAPDYEMGEVQQQLNDYDTLDDIISNDGFFPDMSLAQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQITAPSINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMAQLKDSIDELRRDARFAISDILGRKRVDAELI
complement(801144..801806)         PHAGE_Mannhe_phiMHaA1_NC_008201: terminase endonuclease subunit; ERO09_03960; phage(gi109289941)     6.50e-58            HaemophilusparainfluenzaeMAERLSPAQIHLRTVSAAVAHAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKNPEQALAYLERALGLDQKIGVKGDIKKLRKQLNKADE
complement(801806..802837)         PHAGE_Mannhe_phiMHaA1_NC_008201: capsid protein; ERO09_03965; phage(gi109289940)     1.36e-133           HaemophilusparainfluenzaeMRNETKQKFNAYVARVAELNGVTSNDVAETFSVTPSVEQKLIEKVMLSSNFLQWINVVRDPLMEAELVGLEVASAIASTTDTNTKERETKDISKMTGRKYKCEQVNFDTHIPWAKLDQWAKHPDFQKKLANLTQKTIALNLIMMGLNGTSRSENSDLSSNPKLEDVKKGWLQQLRDDMPTHVMNGANTENKIKVGKGQAKNHGYENIDALVLDAVNTLIDEVYADDTELVVICGREILNDKYFNIVNTDLKPTDDLASQVIISQKQIGGLKAIRVPFFPKNSILITRLDNLSIYIQEGSMRRFIKNNPKRNRVEDYLSQNIDYKVEEYGCAALIENITFEDKE
complement(802848..803666)         PHAGE_Mannhe_phiMHaA1_NC_008201: capsid-scaffolding protein; ERO09_03970; phage(gi109289939)     3.29e-95            HaemophilusparainfluenzaeMAKTSKWFVVATEGATTDGRTINRTWIKQMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVIGLKTEENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKADNLFTAAIETELEFVEETQSIFEKIKGLFAKKEKSDDERFTDQTQAIELLAEQTKETLEKLTALSADLAKQKTELTEVKATNESIQAKFTTLEKTPSADFGKRPIVAGEGKSEFLTDC
803831..805606                     PHAGE_Mannhe_phiMHaA1_NC_008201: terminase ATPase subunit; ERO09_03975; phage(gi109289938)     0.0                 HaemophilusparainfluenzaeMDEQVINQSFPEVTAEIKRKAQQMYFSGYKIAEISRQLNIPASTIASWKDREKWDDIAPVGRVELALEIRLNLLIAKDEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEQNAIDQEQEELLINGFLDGMFNYQRVWHKAKGNRIRNILKSRQIGATHYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNKNRAKSDKVEIDISHENLKSGKLCADRQWKQIVSIYDAIEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNSSAFKFADLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALAIIAPPKVEGGDYRVLHWQTFHGMDYEAQASRIKSFCDDYNVTRIVIDKTGMGSGVFQEVKKFYPMAIGLDYNADLKNEMVLKTQNLIQKRRLKFDGNEIITSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE
805616..806626                     PHAGE_Mannhe_phiMHaA1_NC_008201: portal vertex protein; ERO09_03980; phage(gi109289937)     2.19e-153           HaemophilusparainfluenzaeMSKKSKKSTALSTGNQAQAFSFGEPVPVLDRAEVLNYFESVLMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAFIEVVKNAFGDVIALRSPLAKYMRVGVDEGQFFQIVTGYEEYEFKKGSVLQLINPDINQEIYGVPEYLAALQSAFLNESATLFRRKYYLNGAHAGSIIYMTDPTQNQDDIEAIKTQIRHTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWVGEEVITFSDYKLLN
807096..807110                     attR                                                                                 N/A                 CGCCAGCTCCACCAC

#### region 2 ####
1456353..1456365                   attL                                                                                 N/A                 AAGTGCGGTCAAA
1456511..1457512                   PHAGE_Gordon_Bantam_NC_031074: hypothetical protein; ERO09_07160; phage(gi100132)     4.28e-07            HaemophilusparainfluenzaeMNNQNPIEIYQAQDGTTQVEVRFENDTVWLSQAQMSMLFGKDIRTINEHITNIFDDEELEKESTIRKFRIVRQEGKRQVNREIEHYDLDMIISVGYRVKSKQGISFRRWATARLKEYLTQGYTINQKRLQQNAHELEQALALIQKTANSSELTLESGRGLVDIVSRYTHTFLWLQQYDEGLLTEPQTQQGGTLPTYAEACSALAELKSQLMAKGEASDLFGRERDNGLSAILGNLDQSVFGEPAYPSIEAKAAHLLYFVIKNHPFSDGNKRSGAFLFVDFLHRNGRLLDQNGHPIINDTGLAALTLLVAESDPKQKETLIKLIMHMLKYKQDK
complement(1457573..1458262)       PHAGE_Vibrio_nt_1_NC_021529: Sir2 family NAD-dependent protein deacetylase; ERO09_07165; phage(gi514050468)     3.16e-35            HaemophilusparainfluenzaeMKPICVVLTGAGISAESGIPTFRAEDGLWAGHKVEEVCTPEALQKNRAKVLDFYNQRRKNAAAAKPNAAHLALVELEKAYDVRIITQNVDDLHERAGSSKVLHLHGELNKARSSFDESYVVDCFGDQKLEDKDPNGYPMRPYIVFFGEMVPMLERAVDIVEQADVVLVIGTSLQVYPANGLVNEAPSKAPIYLIDPNPNTGFVRKQVIAIKEKAGEGVPKVVAELLERV
complement(1458378..1459061)       arginine ABC transporter permease ArtM; ERO09_07170                                  N/A                 HaemophilusparainfluenzaeMFQEYLAVIAQGIPTSLLLTVVALFIAFFLALGLTFLLSIGNKLVKSAVNLFLVLFTGTPLLVQFFLIYAGPGQFQWLVDSPLWGLFSNAWFCAALALALNSAAYSTQLFHGAVKAISKGQWESCAALGLSRMQTLKILIPYALKRALPSYTNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRQLENKVLSFERIDAAKA
complement(1459061..1459732)       arginine ABC transporter permease ArtQ; ERO09_07175                                  N/A                 HaemophilusparainfluenzaeMFYDYLTLIGHAALMTLGLAICSLIVGLLLSIVFTALEANKYAFIAKPTAIIIALLRGLPEILVVLLIYFGSTQVVEMMTGEYIEFGAFGCGVFALSLIFASYASQTLRGAIQAIPKGQWESGAALGLSRPYTFINLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELRFTRFERGVE
complement(1459736..1460455)       transporter substrate-binding domain-containing protein; ERO09_07180                 N/A                 HaemophilusparainfluenzaeMKKLLLTAMLMGSAFAANAQEITFAMEPSYPPFETTNEKGEIIGFDVDVANAICKEIQATCHFKSQAFDALIPGLKSKRFDASISAIDITDARAKQVAFSNAYYDSSASYVALKGKADLSSAKTVGVQNGTTFQQYTAAESKQYNAKAYASLQDAILDLKNGRIDIIFGDTAVLADMISKEAEIQFVGDKVTDKKYFGNGLGIAVNKSSKELLESLNKGLEAVKANGEYQKIYDKWMTK
complement(1460467..1461204)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; ERO09_07185; phage(gi371496158)      3.15e-38            HaemophilusparainfluenzaeMAISVKNLNFFYGSSQALFDINLDAQEGDTVVLLGPSGAGKSTLIRTLNLLEVPTSGQLHIANNHFDLSQANNNPKAIRQLRQDVGMVFQQYNLWPHLTVIENLIEAPKKVLGISEEEAKKDALELLKRLRLEEHADRFPLHLSGGQQQRVAIARALMMKPQVLLFDEPTAALDPEITAQVVDIIKELQQTGITQVIVTHEVNVAQKVATKVVYMEQGKIIEMGSADCFDNPKTEQFKQYLSHSE
complement(1461354..1461938)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; ERO09_07190; phage(gi725949171)     4.33e-16            HaemophilusparainfluenzaeMYFDQIKAELVEAQDVLNKFVSDDNNIKLIEKAAKLLAESFKNGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRFVEAVGKEGDVLFGLSTSGNSKNILNAIEAAKAKGIKVIAMTGKDGGKMAGLADVEIRVPHFGYADRIQEIHIKVIHILMMLVEFEMAKEA
1462138..1462947                   PHAGE_Geobac_E3_NC_029073: putative ATP-dependent DNA ligase; ERO09_07195; phage(gi985758441)     6.98e-16            HaemophilusparainfluenzaeMRVVYLLLCMLFSLITWANDSDLMLLSTYENQDIQGWVMSEKLDGIRGYWDGKALLSRQGLPLPAPAYFTAQFPPFAIDGELFSERNQFEEIASITKSFKGDNWAKLTLYVFDVPNASGNLFERLKTLEDYLKDHPTPYIKIIPQIPIRDKTHLFEYLHEIEGKKGEGIALRNPNSPYERKRSTQILKLKSTYDEECTVIAHHKGKGQFENILGSLTCENHRGKFKIGSGFNLSERENPPPIGSTITYKYRGLTNSGKPRFATYWREKK
complement(1463002..1463325)       PHAGE_Dinoro_DFL12phi1_NC_024367: putative host-like protein; ERO09_07200; phage(gi658311036)     2.30e-17            HaemophilusparainfluenzaeMSEVLHINDADFETAVVQSDIPVLVDFWAPWCGPCKMIAPILDEIAPEFAGKAKIVKINVDDNQLVAGQFGVRSIPTLLLFKNGQLVATQVGALPKNQLAAFINQHL
complement(1463443..1464552)       methionine biosynthesis PLP-dependent protein; ERO09_07205                           N/A                 HaemophilusparainfluenzaeMTQQYSIDTLLAQAGNRSDERTGAVSTPIYLSTAYGHHGIGESTGFDYTRTKNPTRSVLEDTVAKLENGDRGFAFSSGMAAIQVLMNLFRGPDEWILSSDVYGGTYRLLDFAYKNNNSVKPVYVNTASLAEIEAAITANTKAIFIETPSNPLMEECDVAEIAKLAKKHNLLMIVDNTFLTPVLSRPLDLGADIVIHSGTKYIAGHNDSLVGLIIAKGQELCDRIAYIQNGAGAVLSPFDSWLTVRGMKTLSLRMKRHQDNAKEIAEFLREQPQIDSVLYPNKGGMLSFRLKDENWVNTFLKSIKLITFAESLGGTESFITYPATQTHMDIPEAERVARGITNTLLRFSVGLEDVEDIKADLLQAFAQLK
1464809..1464884                   tRNA                                                                                 N/A                 GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCA
1464892..1464965                   tRNA                                                                                 N/A                 GGCGTGTTAGCAAAGCGGTTATGCACTGGATTGCAAATCCATGTAGCTCGGTTCGACTCCGGGACACGCCTCCA
1464994..1465080                   tRNA                                                                                 N/A                 GCCCGAGTGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGCCTTTCGAGGCGTGCCAGTTCAAGTCTGGCTTCGGGCACCA
1465131..1465206                   tRNA                                                                                 N/A                 GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGAAGGTTCGAATCCTTCACGACCCACCA
1465736..1466230                   PHAGE_Haemop_HP1_NC_001697: hypothetical protein; ERO09_07230; phage(gi9628602)      2.08e-77            HaemophilusparainfluenzaeKGVKITDWISSLSTLIIMLFTAIGISSWKKQKIPDLKSKVARNIIDFDTHAVFFPSKGFKSIDEIKEYHTIQLKIFWDIEHSLSTLYMFDKSYKLEIDNLLASLLKVINDVTNLIEQNSRINEVRIRKLINDINDDYKTFFPNTTALFKLVVGKNNVVGINGRS
1466217..1466451                   PHAGE_Haemop_HP1_NC_001697: integrase; ERO09_07235; phage(gi9628601)                 2.33e-09            HaemophilusparainfluenzaeMVGRKDTKNDRLAEVYVNGKRFLTKGEALRFYNQVKEQEWLILYKFWNQAIYPHVFMSGMVFTPNIVRRITFT
complement(1466586..1467974)       c-type cytochrome; ERO09_07240                                                       N/A                 HaemophilusparainfluenzaeMKKLIIGGIAIAILGYLGVVGYLHQFDKNNATQLLMENSSLAEQEKVAEALFDNGCQYCHSPNTRLPFYSKFPIVGDEMQSDIQNGLRAFRLDRLVEGLKDPSKLSQADLAKLQRVLENNEMPIAKFRHLHWGSKPDEQEKVALLNWIREARKMSLPKEIPNADADRLVQPIPDNIAKDKAKAALGHDLFFDGRLSGDGSIQCHTCHQLDKGGVDRLETSTGIDGQKGPINAPTVFNAAFNFVQFWDGRAADLADQAKGPPTNPVEMGSHSWDDIVARFEMDEEFKKAFLKEYPQVTKETLTHAIGEYEKTLITPNSDFDRYLKGDKTALTEQQVRGYELFKQHKCDTCHTGVAMGGQSYEYMGLYGDYFKDRGTPLTDADEGRFAQTKDPFDMHRFKVPTLRNVALTAPYFHDASAKELKDAVIAMLKYQSNVQQPTQKDVEDITSFLESLTGEFKGEKLK
complement(1468204..1469091)       PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; ERO09_07245; phage(gi15834405)     1.11e-116           HaemophilusparainfluenzaeMRKFLLPIIVVIAAVLYSSIVVVTEGTRGIMLRFNKVQRDAENKVVVYEPGLHFKLPLIDSIKVLDARIRTLDGSATRFVTVEKKDLLVDSYVKWKISDFGRFYTATGGGDYNQAASLLSRKVNDRLRSEIGTRTIKDIVSGTRGELMAGAKKALNSGQDSTSELGIEVVDVRVKQINLPDEVSSSIYQRMRAERDAVAREHRSQGKEKAAFIQADVDRKVTLILANANKRAQELRGNGDAAAARLYSQAFAQEPQFYSFIRSLKAYESSFEGSGNMMILKPDSDFFRFMQAPKK
complement(1469091..1470344)       PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; ERO09_07250; phage(gi15834404)     2.28e-123           HaemophilusparainfluenzaeMENVMSQNGPDQDPWGKPGQSSGSKQSDNSSDKQNENGWGSRDNKNQEQSPPDIEEVFNNLLKKLGGGNKKGGSNNTSPNIPSFNLGKILPIVAVIGGIIWGASGFYTIKEAERGVTLRFGEFHSTVQPGLNWKPTFIDKVIPVNVEQVRELKTQGAMLTKDENMVKVEMTVQYRVQNPEKYLFSVSNADNSLGQATDSALRYVIGHMTMNDVLTTGRAVVREKTWKALNDIVKPYDMGLEVIDVNFQSARPPEEVKDAFDDAIKAQEDEQRYIREAEAYAREKEPIARGDAQRIIEEATAYKDRVVLDAQGEVERLQRLLPEFKAAPDLLKERLYIQTMEKVMANTPKVILDANNGNNLTVLPLEQLMGKKAAQPTTITPESAVSSAPVSTQERRVETQTTQPVQANEGIRQGRFN
1472887..1472899                   attR                                                                                 N/A                 AAGTGCGGTCAAA
