gi|00000000|ref|CP035452.1|  Streptococcus pyogenes strain emm123 chromosome, complete genome. 1768816, gc%: 38.48%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
597438..601070                     PHAGE_Bacill_G_NC_023719: gp299; ETT47_03115; phage(gi593777755)                     8.31e-29            StreptococcuspyogenesMISFAPFLSPEAIKHLQENERYSDQSQKRTAQQIEAIYTSGQNILVSASAGSGKTFVMVERILDKILRGVSIDRLFISTFTVKAATELRERIENKLYSQIAQTTDFQMKVYLTEQLQSLCQADIGTMDAFAQKVVSRYGYSIGISSQFRIMQDKAEQDVLKQEVFSKLFNEFMNQKEAPVFRALVKNFSGNCKDTSAFRELVYTCYSFSQSTENPKIWLQENFLSAAKTYQRLEDIPDHDIELLLLAMQDTANQLRDVTDMEDYGQLTKAGSRSAKYTKHLTIIEKLSDWVRDFKCLYGKAGLDRLIRDVTDLIPSGNDVTVSKVKYPVFKTLHQKLKQFRHLETILMYQKDCFPLLEQLQDFVLAFSKAYLAVKIQESAFEFSDIAHFAIKILEENTDIRQSYQQHYHEVMVDEYQDNNHMQERLLTLLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFRDYQKKPEQGKVILLKENFRSQSEVLNVSNAVFSHLMDESVGDVLYDEQHQLIAGSHAQTVPYLDRRAQLLLYNSDKDDGNAPSDSEGISFSEVTIVAKEIIKLHNDKGVPFEDITLLVSSRTRNDIISHTFNQYGIPIVTDGGQQNYLKSVEVMVMLDTLRTINNPRNDYALVALLRSPMFAFDEDDLARIALQKDNELDKDCLYDKIQRAVIGRGAHPELIHDTLLGKLNVFLKTLKSWRRYAKLGSLYDLIWKIFNDRFYFDFVASQAKAEQAQANLYALALRANQFEKSGYKGLYRFIKMIDKVLETQNDLADVEVAAPKQAVNLMTIHKSKGLQFPYVFILNCDKRFSMTDIHKSFILNRQHGIGIKYLADIKGLLGETTLNSVKVSMETLPYQLNKQELRLATLSEQMRLLYVAMTRAEKKVYFIGKASKSKSQEITDPKKLGKLLPLALREQLLTFQDWLLAIADIFSTEDLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIARALDMLEAVSQLNANYEAAIHLPTVRTPSQLKAAYEPLLEPIGVDIIEKSSRSLSDFTLPHFSKKAKVEASHIGSALHQLMQVLPLSKPINQQTLLDALRGIDSNEEVKTALDLKKIESFFCDTSLGQFFQTYQKHLYREAPFAILKVDPISQEEYVLRGIIDAYFLFDDHIVLVDYKTDKYKQPIELKKRYQQQLELYAEALTQTYKLPVTKRYLVLMGGGKPEIVEV
601209..602021                     transporter substrate-binding domain-containing protein; ETT47_03120                 N/A                 StreptococcuspyogenesMNFKKIRFGFLLCLLLYPLAACNKSEQINHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDTIVGADVQLAQAIADELDVDLELSPMSFDNVLSSLQTGKADLAISGISHTKERAKVYDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKANLISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKNSGDLTKAVNKVIAKLDEQERYKSFIAETIALTKNTMK
602162..602338                     PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; ETT47_03125; phage(gi460042545)     8.68e-07            StreptococcuspyogenesMSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSEAARKRKKF
complement(602467..602829)         large conductance mechanosensitive channel protein MscL; ETT47_03130                 N/A                 StreptococcuspyogenesMVKELKAFLFRGNIIELAVAVIIGGAFGAIVTSFVNDIITPLILNPALKAANVENITQLSWNGVKYGSFLGAVINFLIIGTSLFFVVKAAEKAMPKKEKEATAPTQEELLTEIRDLLAQK
602960..604774                     PHAGE_Helico_phiHP33_NC_016568: DNA primase; ETT47_03135; phage(gi371671350)         9.88e-46            StreptococcuspyogenesMGFLWGGDDLAIDKEMISQVKNSVNIVDVIGEVVKLSRSGRHYLGLCPFHKEKTPSFNVVEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIIADKTGMSLNIPPSQAVLASQHKHPNHALMTLHEDAAKFYHAVLMTTTIGQEARKYLYQRGLDDQLIEHFNIGLAPDESDYLYQALSKKYEEGQLVASGLFNLSDQSNTIYDAFRNRIMFPLSDDRGHIIAFSGRIWTAADMEKRQAKYKNSRGTVLFNKSYELYHLDKARPVIAKTHEVFLMEGFMDVIAAYRSGYENAVASMGTALTQEHVNHLKQVTKKVVLIYDGDDAGQHAIAKSLELLKDFVVEIVRIPNKMDPDEFVQRHSPEAFADLLKQSRISSVEFFIDYLKPTNVDNLQSQIVYVEKMAPLIAQSPSITAQHSYINKIADLLPNFDYFQVEQSVNALRIQDRQKRQGQIAQAVSNLVTLPMPKSLTAIAKTESHLMHRLLHHDYLLNEFRHRDDFYFDTSTLELLYQRLKQQGHITSYDLSEMSEEVNRAYYNVLEENLPKEVALGEIDDILSKRAKLLAERDLHKQGKKVRESSNKGDHQAALEVLEHFIAQKRKME
604783..605892                     PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; ETT47_03140; phage(gi331028036)     4.82e-46            StreptococcuspyogenesMTKQKEITTFNVQVAEFIRHHKKEGTAIDDDVTEKLVIPFALDADQIDDLLERLTDGGISITDKEGNPSSKYIVEEPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKELAVAVAKGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKQLRDFIED
606128..606466                     metal-sulfur cluster assembly factor; ETT47_03145                                    N/A                 StreptococcuspyogenesMSDTPKYTQDQVIAIKNRILEALETVIDPELGIDVVNLGLIYEIRFNDNGYTEIDMTLTTMGCPLADLLTDYIHDALQDVPEVTKTEVKLVWYPAWTVDKMSRYARIALGIR
606604..607458                     PHAGE_Entero_phi92_NC_023693: Phi92_gp064; ETT47_03150; phage(gi726646997)           4.46e-40            StreptococcuspyogenesMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRPDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQHGRPTWTRTLAEFMCHLTENQKAFGYYHLSNDAKEDTTWYDFAKEILKDKAVEVVPVDSSAFPAKAKRPLNSTMNLDKAKATGFVIPTWQEALKAFYQQGLKK
607599..608732                     PROPHAGE_Shewan_MR-1: transposase, putative; ETT47_03155; phage(gi24373689)          7.99e-60            StreptococcuspyogenesMIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDVNLLEELQENAQYDQTVEKSRGQIEVREYWVSSDIKWLCQNHPKHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRDHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG

#### region 2 ####
1442669..1443613                   PHAGE_Lactob_Lb338_1_NC_012530: Mg2+/Co2+ transport protein CorA; ETT47_07170; phage(gi226377699)     1.12e-09            StreptococcuspyogenesMKQMFLSSAIEFKEIETFEPGAWIKLVNPSQEESLEIADQFNIDISDLRAPLDVEETSRIAVEDDYTLIIVDVPIYEERNNKSYYITMPLGIIVTENAVITTCLHDMTLFDHFHNRRVKNFYTFMKTRFVFQILYRNAELFLTALRTIDRQSERLEAQLEAATRNEELIDMMELEKSIVYLKASLKFNERIVKKLSSSTSSLKKYIEDEDLLEDTLIETQQAIEMAGIYENVLNAMTETTASIINNNQNTIMKTLALMTMALDIPTVIFSAYGMNFQNNWLPLNGLEHAFWYITLIAMLLSSFVVIYFIRKKWF
1443746..1444402                   DUF1129 domain-containing protein; ETT47_07175                                       N/A                 StreptococcuspyogenesMELQELTKKNQEFIHTATNKLIQDGKSDEDIKLILEEAVPAILENQKKGVTARNLLGTPTAWAASFSQDPSQRAAETDKNTNPWLMWLDTSLLFIGIVALLNGIMTFFNTNATVTGLISLLALGFGGGASMYATYYFIYRHLGKDKSLRPSWFKIIAALSLAMLIWIALYSATAFLPTSLNPQLPPLALLIIGGVSLALRYYLQRKYNIQNTMSPVNK
complement(1444533..1444772)       30S ribosomal protein S18; ETT47_07180                                               N/A                 StreptococcuspyogenesMAQQRRGGFKRRKKVDFIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPYVNED
complement(1444937..1445428)       PHAGE_Temper_phiNIH1.1_NC_003157: single-strand binding protein; ETT47_07185; phage(gi16271789)     3.98e-79            StreptococcuspyogenesMINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDDLPF
complement(1445450..1445740)       30S ribosomal protein S6; ETT47_07190                                                N/A                 StreptococcuspyogenesMAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEINDFREGLYHIVNLEATDAAALNEFDRLSKINGDILRHMIVKLDA
complement(1445913..1446206)       PHAGE_Temper_phiNIH1.1_NC_003157: hypothetical protein-phage associated; ETT47_07195; phage(gi16271831)     6.17e-05            StreptococcuspyogenesMFQKLKNLIDRYSWFVFIMMILVLFLNYIYPFDPSLSGLQLEWLIMTQVFPGLGIVCAMVAIIFKKFNLFVLALILYFALWLKLFLAFSFFTYFLGV
1446404..1447528                   PHAGE_Aeropy_1_NC_028268: hypothetical protein; ETT47_07200; phage(gi948298243)      1.92e-27            StreptococcuspyogenesMWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLEWFPQIKDLADAPEEQLLKAWEGLGYYSRVRNMQKAAQQVMVDFGGIFPHTYDDIASLKGIGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQALMDLGTDIESAKTPRPDESPIRFFNAAYLNGTYGKYPIKNPKKKPKPMRIQAFVIRNQNGQYLLEKNTKGRLLGGFWSFPIIETSPLSQQLDLFDDNQSNPIIWQTQNETFEREYQLKPQWTDNHFPNIKHTFSHQKWTIELIEGVVKATDLPNAPHLKWVAIEDFSLYPFATPQKKMLETYLKQKNA
1447705..1448292                   PHAGE_Bacill_Waukesha92_NC_025424: transcriptional regulator; ETT47_07205; phage(gi712912392)     1.56e-08            StreptococcuspyogenesMEIGQQMIRYRKQQALSQEELVEKVYVSRQSISNWENDKTYPDIHSLLLLSQIFQVSLDQLIKGDIEKMKYTITQVDKKNFERDTKVMVTLMILLMISSYPLVYFLEWLGLGIFVLLSIITMTYANRVERFKKKYDVQPYKEILAVSSGKLLDEIEKREERAKLPYQKPLIVTVFFLITVAIFFASRFMFTWLFH
complement(1448344..1448658)       PHAGE_Dinoro_DFL12phi1_NC_024367: putative host-like protein; ETT47_07210; phage(gi658311036)     1.93e-13            StreptococcuspyogenesMALEVTDATFVEETKEGLVLIDFWATWCGPCRMQAPILEQLSQEIDEDELKILKMDVDENPETARQFGIMSIPTLMFKKDGEVVKQVAGVHTKDQLKAIIAELS

#### region 3 ####
1531749..1531760                   attL                                                                                 N/A                 TTTTGTTATTTT
1531864..1532637                   PHAGE_Escher_RCS47_NC_042128: DNA helicase; ETT47_07620; phage(gi100021)             6.72e-24            StreptococcuspyogenesMKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLIRTHGGAQYLDYSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNRNIRVITNSLPVFLILHPSTTIDLILIGGECREITGAFVGAIAINNLESLTFSKAFVSANAVYNNSIATYSDLEGEVQRVALNNAVEKILLVDSTKFESYDFYNFYQLDQVDLIVTDKNVTTDIIEKYKKFSKIIIADK
1533287..1533574                   DNA-damage-inducible protein J; ETT47_07625                                          N/A                 StreptococcuspyogenesMTTVKKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEINKNIEDVRQGKFYTSEEVRAELGL
1533564..1533899                   type II toxin-antitoxin system RelE/ParE family toxin; ETT47_07630                   N/A                 StreptococcuspyogenesMDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQRKMEQIISDIEKLEVFPEVGFDADEKYGSKISHYHSTKGYTLSKDYIVLYHIEGEENRVVIDYLLPTQSDYIKLFK
1534051..1534233                   PHAGE_Lactob_phiJB_NC_022775: integrase; ETT47_07635; phage(gi571797859)             6.27e-05            StreptococcuspyogenesMEEFTKPTHKTYSEIFEKWYQAYQDTVEPTTASRTLDLFRLHILPVMGELPINKTYPLDC
1534321..1534521                   integrase; ETT47_07640                                                               N/A                 StreptococcuspyogenesMKLLKHTPMAEIIMPKRKTRIENYWTVQELQEFLAIVLQKEPYKHYALFRLLAYSGLKERRAMRS
1534635..1534985                   PHAGE_Strept_315.6_NC_004589: putative integrase; ETT47_07645; phage(gi28876488)     1.61e-14            StreptococcuspyogenesMKLDSETISILQEWKAISQKEKAQLAVAPLSIESDFIFTYCTREGSIEPLHADYINNILSKVIKQHSLKKISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYSHATAV
complement(1535153..1535545)       30S ribosomal protein S9; ETT47_07650                                                N/A                 StreptococcuspyogenesMAQAQYAGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRLIINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR
complement(1535566..1536012)       50S ribosomal protein L13; ETT47_07655                                               N/A                 StreptococcuspyogenesMNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKATDKVYYTHSMYPGGLKSITAGELRSKNAVRLIEKSVKGMLPHNTLGRAQGMKLKVFVGGEHTHAAQQPEVLDISGLI
complement(1536230..1536436)       PHAGE_Brevib_Abouo_NC_029029: XRE family transcriptional regulator; ETT47_07660; phage(gi971767218)     4.60e-10            StreptococcuspyogenesMKNLKLKAARAGKDLSQQALADLVGVSRQTIAAVEKGDYNPTINLCIAICRVLDKTLDDLFWEADDSR
complement(1536433..1537164)       hypothetical protein; ETT47_07665                                                    N/A                 StreptococcuspyogenesMSCKDLKEKRIMFDSKQNLAKSQWGFIVITAVMDLVVIVATLLAKTSFQRYLVGGVAVILTSFLILLVWGLRTAKKLQTRLDSKEVLDSKVRDDQKLSRYDERQKQILLKGYTIGFWFMIVVIWLSLFISRFTEGLVSASFLFTLALWGGLAVQTTYCNLNGVSPFVDRRFGKQGILVGMIATGMSLVTIGLAVRETMAGQLKMGSFFKAGGSGSLMVLGITLLSMGASIFYRHYLDAKEADE
complement(1537267..1538127)       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; ETT47_07670; phage(gi985761237)     8.02e-12            StreptococcuspyogenesMTFTIMTDSTADLNQTWAEDHDIVLIGLTILCDGEVYETVGPNRISSDYLLKKMKAGSHPQTSQINVGEFEKVFREHAKNNKALLYLAFSSVLSGTYQSALMARDLVREDYPDAVIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVIPRLRTYFLVDDLFHLMRGGRLSKGSAFLGSLASIKPLLWIDEEGKLVPIAKIRGRQKAIKEMVAQVEKDIADSTVIVSYTSDQGSAEKLREELLAHENISDVLMMPLGPVISAHVGPNTLAVFVIGQNSR
complement(1538224..1538742)       NYN domain-containing protein; ETT47_07675                                           N/A                 StreptococcuspyogenesMKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLRQRYDQYYISVVFTEEDETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGALRVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQLIQLKDFMSQLDR
complement(1538746..1539492)       PHAGE_Rhodoc_Trina_NC_042040: replication and recombination DNA helicase; ETT47_07680; phage(gi100033)     4.40e-11            StreptococcuspyogenesMEDKDTIETNDIVYGVHAVTESLQANTGNKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQMTDGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPSDCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR
1543002..1543013                   attR                                                                                 N/A                 TTTTGTTATTTT
