gi|00000000|ref|CP035547.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4863742, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
392639..392685                     attL                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAT
complement(392699..393367)         PHAGE_Salmon_ST64T_NC_004348: integrase; D6D39_01800; phage(gi24371538)              5.29e-160           SalmonellaentericasubspentericaserovarTyphimuriumMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINLEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKASSTKPDRTKSPVVRKMRYDANTAWRAALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFDTSVPNMSHGKNKEGTNNT
complement(393739..394089)         PHAGE_Entero_UAB_Phi20_NC_031019: recombination endonuclease subunit; D6D39_01805; phage(gi100052)     8.93e-82            SalmonellaentericasubspentericaserovarTyphimuriumMESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPTKPKSPYLTTRQACIAALQSPLHTVQVSAGDDITEELKCHYSAEVKPGTPVSHCRTAKDLSSLLGQRTKGRPQSFMTS
complement(394300..394695)         PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01810; phage(gi100055)     2.35e-31            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIELFVKSPLENGLTRGEQMDLARIALASLEAEPIGYMNRFTGRVFSLDEQPGADTDTDVYEPVYAAPPAPVVPDGYALVPVEPTDEMIAAAMNCEDVMFNSDESFCVQFGNIYEAMLAAAPQK
complement(394699..395172)         PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; D6D39_01815; phage(gi100067)     2.37e-66            SalmonellaentericasubspentericaserovarTyphimuriumMSQQTILDMCCGSRMFWFNKQDSRTVFADIRAEEHTLCDGRRLVISPDLIADFRALPFADSSFPVVVFDPPHLERVGQTAWMGKKYGHLNKKTWRADIRAGFKEAFRVLRPHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
complement(395172..395621)         PHAGE_Shigel_Sf6_NC_005344: gene 21 protein; D6D39_01820; phage(gi41057299)          1.93e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSEINYQALREKAEKATCGVWSLEYGEGRFDGDDALIHREAAGYIPICRIEGAHPESGFDEDFQMEQQANAEFIAAASPAAVLALLDEREAAKKRIAELEARTVNLPKRSVGEVMHLSGFSRDYAEGWCAGNDNAMHEIRAAGIKVKES
complement(395623..395922)         PHAGE_Escher_HK75_NC_016160: hypothetical protein; D6D39_01825; phage(gi356870704)     2.15e-65            SalmonellaentericasubspentericaserovarTyphimuriumMSVCLIDKRRRGQQIPSVEMPNHTWFCVLDIDGMDTLIDTRHYCDTATATPAKAKKMAALIENWTPPDGWCNGNDRDWHEKMKGYICDFLRKCNGFMVM
complement(395919..396317)         PHAGE_Entero_HK97_NC_002167: Gp37; D6D39_01830; phage(gi9634184)                     7.29e-39            SalmonellaentericasubspentericaserovarTyphimuriumMKQMTLIEMDGFLKGKCIPRDLKVNETNAEYLVRKFAEAEAKCAALAAENAGMKHAMAVTLEHVSVTDAGQAGVAAMIINDALHHSETPATDAFLAEVWAQGVEMFADNLLCPDLDDTIRDFAAQLRKGGNQ
complement(396314..396478)         PHAGE_Entero_Sf101_NC_027398: hypothetical protein; D6D39_01835; phage(gi849122286)     6.76e-32            SalmonellaentericasubspentericaserovarTyphimuriumMRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNEMWRSGKK
complement(396489..396782)         PHAGE_Entero_ES18_NC_006949: gp46; D6D39_01840; phage(gi62362259)                    6.00e-58            SalmonellaentericasubspentericaserovarTyphimuriumMPAPLYGADDPRRCSGNSVSDVLDKFRKNYDLIMSMPQETKAERDFRNSIWLAERNEKELIRQTSIRPFRKAIYTKFIEIDPRLKNYRSRYGAISND
complement(396829..397113)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_01845; phage(gi100028)      2.23e-63            SalmonellaentericasubspentericaserovarTyphimuriumMRRLNITPAEMESVCGRMVACRAAEHLGLNINQFYYIAKKLSLKTAFVKPRWSEDEDKRMQALISSGYTQRNVAKILGRSEESVKSRLSRLRKK
complement(397113..397820)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_01850; phage(gi100029)      4.82e-175           SalmonellaentericasubspentericaserovarTyphimuriumMNLDQLDEPFAAEDIEWRIQQSGKTGSGKVWAIVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIGSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISSDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLAGHDDAQTKCVQVMNIRINELKQVA
complement(397950..398138)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_01855; phage(gi100031)      4.41e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTITPVNGTILVQQGNREFNKLYEKVFPDTKQGISDAYTWAAGIALGWDKWQDEDWERRHVA
complement(398119..398271)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_01860; phage(gi100032)      7.89e-31            SalmonellaentericasubspentericaserovarTyphimuriumMQYSFAGWPIAGCPSESLLDRITRKLRAGWKRLGEILNQPGVPRHDHYAC
complement(398595..398885)         PHAGE_Salmon_BTP1_NC_042346: membrane-associated initiation of head vertex; D6D39_01865; phage(gi100034)     1.03e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNYTPGPWKWWTSNSFLRLSSQATGKDGGVIDSYVMKDGHSSLIVSKEDMNLIAAAPELLEALQLLLNSWSNGSSKDISNAERKARSAISKALGEE
complement(398917..399159)         PHAGE_Salmon_STML_13_1_NC_042061: baseplate subunit; D6D39_01870; phage(gi100105)     3.57e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKIKTMGASLLSGRIFQGTLNTEKGMWVGKKEDVTEQAVKAVAEHMMIKDQKYAYETKDGKWLIISHQLVDKLPEEFIAD
complement(399187..399387)         PHAGE_Salmon_BTP1_NC_042346: RecA-like recombination protein; D6D39_01875; phage(gi100035)     8.66e-41            SalmonellaentericasubspentericaserovarTyphimuriumMTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVREDGKIVDKWAIRTTAMIARELGKQNNKAA
399602..400180                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01880; phage(gi100073)     7.19e-141           SalmonellaentericasubspentericaserovarTyphimuriumMNNSWWQELMRFFLQGMTLKQLIHMLIILIVLIIVMPVSVKEWINLHNPEILPHYWMYYILLFCVSYVLNGVVNSVYHAVTERIEASTAQRRKDREEKVVRDLFDSLTLGERAYLAFAVAANNQLKTEKGSPEAISLLKKGIITRLPSAIGYPDIDRFIIPEKYFNECYMRFAGKSDILMNELIVQDEQLKK
complement(400201..400503)         PHAGE_Entero_UAB_Phi20_NC_031019: DCMP deaminase; D6D39_01885; phage(gi100074)       7.22e-68            SalmonellaentericasubspentericaserovarTyphimuriumMTVITYGKSTFAGNAKTRRHERRRKLAIERDTICNIIDSIFGCDAPDASQEVKAKRIDRVTKAISLAGTRQKEVEGGSVLLPGVALYAAGHRKSKQITAR
complement(400857..401507)         PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01890; phage(gi100076)     1.04e-160           SalmonellaentericasubspentericaserovarTyphimuriumMNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGDLSQTNVAYHSRHEPRGSYPLISWVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPEGMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEINGNCKIIGVVVDAKLANLP
401588..401773                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01895; phage(gi100077)     4.33e-38            SalmonellaentericasubspentericaserovarTyphimuriumMYKKDVIDHFGTQRAVAKALGISDAAVSQWKEVIPEKDAYRLEIVTAGALKYQENAYRQAA
401880..402158                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01900; phage(gi100079)     6.42e-62            SalmonellaentericasubspentericaserovarTyphimuriumMELTSTRKKANAITSSILNRIAIRGQRKVADALGINESQISRWKGDFIPKMGMLLAVLEWGVEDEELAELAKKVAHLLTKEKPQDCGNSFEA
402193..402339                     PHAGE_Entero_UAB_Phi20_NC_031019: protector from prophage-induced early lysis; D6D39_01905; phage(gi100001)     2.51e-27            SalmonellaentericasubspentericaserovarTyphimuriumMPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
402332..403147                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01910; phage(gi100002)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNLATVTPIKPHLEVVEHRVAELDDGYTRTANTLLEAVMLSGLTQHQLLIVMAVWRKTYGYNKKIDWIGNEQFAELTGMAPTKCSTAKNELIRMGVLTQVGRQVGMNKNISEWKTKVNGFGKTFTRSVKLTFTKSVKTNLPNQSNTKDNIQKTINTNTPLPPKGGCDEGSKPEKRKPTKINYSEYLAAYNEIVGDRLPHAVEVNSERQRKLKKLIDSLATKNIDGFRAYVKAFMAAARPFHFGDNDRDWVANFDYLLRPKVLIAIREGTL
403144..404520                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01915; phage(gi100003)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRQDIEASVIGGLLIGGLTPTASDVLATLEPEAFSIPLYRKAFEVIRKQARNRNLIDGLMVAEECGDEYATAVMMTARSCPSAANLKGYAGMVADSYQRRQVLQLLDEMREPISNGTLDASGRAMDELVKRLSSIRKPRNEVKPVRLGEIINDYTDTLDRRLRNGEESDTLKTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRVIPGSGVRRGVLIFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLAELDVWVVDASRLSVEEIRSISERHKQEHPNLSLIMADYLGLIEKPKAERNDLAIAHISGSLKAMAKDLKTPVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEIIVTKNRFGSLGTVYQRFCNGHFVACDQDEARQICTASNAPAGRRKRYAQGADV
404594..405031                     PHAGE_Entero_UAB_Phi20_NC_031019: DNA topoisomerase II large subunit; D6D39_01920; phage(gi100005)     2.03e-104           SalmonellaentericasubspentericaserovarTyphimuriumMKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVNWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALECKARFGDAA
405028..405201                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01925; phage(gi100006)     2.16e-37            SalmonellaentericasubspentericaserovarTyphimuriumMKHCYRCGESKDDYRFRPNQPYWHQWCIRCERSPVGNFPLPETKEDVWHDSDEVSPT
405168..405344                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01930; phage(gi100007)     1.74e-36            SalmonellaentericasubspentericaserovarTyphimuriumMARQRRSITDIICENCKYLPTKRSRNKRKPIPKESDVKTFNYTAHLWDIRWLRHRARK
405347..405679                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01935; phage(gi100008)     1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumMDYSQLSDFEINKRVAIATGHKKFNGLGWQGTQEDSCSAVIVRGPTKIGAFDPCNNPADAWPIIEKYRISFLDQLTEWCVDAKGVSPIFDIRPLRAAMIVFLLMQDANNA
405672..405848                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01940; phage(gi100009)     5.27e-36            SalmonellaentericasubspentericaserovarTyphimuriumMLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCEACCAELMSDPNSSMYEEEDDG
405841..406452                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01945; phage(gi100010)     5.53e-148           SalmonellaentericasubspentericaserovarTyphimuriumMAKSARRRCKNEECREWFHPAFANQWWCSPECGTKIALERRSKEREKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYWIKQAQQAVNAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVMLIERIGIAAVDEIESDHKRHRWTTEECKAIKAEYQQKLKDLRDSRSEAA
406449..406673                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01950; phage(gi100011)     6.28e-51            SalmonellaentericasubspentericaserovarTyphimuriumMSKIQYPMTTAAIFDDVVYPLHFDNAGKVRQEMEGAVNWFCRWCNEEKAAVKARLLVSCWGQYLSHEQVIREAA
406670..406873                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01955; phage(gi100012)     1.34e-43            SalmonellaentericasubspentericaserovarTyphimuriumMTHTVKTIPDMLIETYGNQTEVARRLSCHRNTVRRYLYDKEARYHAIVNGVLMIHQGGRGVYDRNQH
406854..407033                     PHAGE_Salmon_118970_sal4_NC_030919: DNA polymerase; D6D39_01960; phage(gi100036)     7.54e-36            SalmonellaentericasubspentericaserovarTyphimuriumMTVTSINQAKQQRERDEAELRSVREMTEQHQKAMDYLHERERELVNRLGLNKPAGGDAA
407030..407653                     PHAGE_Entero_HK446_NC_019714: late gene regulator Q; D6D39_01965; phage(gi428782247)     5.64e-154           SalmonellaentericasubspentericaserovarTyphimuriumMRLESVAKFHSPKSPMMSDSPRATASDSLSGTDVMAAMGMAQSQAGFGMAAFCGKHELSQNDKQKAINYLMQFAHKVSGKYCGVAKLEGNTKAKVLQVLATFAYADYCRSAATPGARCRDCHGTGRAVDIAKTEQWGRVVEKECGRCKGVGYSRMPASAAYRAVTMLIPNLTQPTWSRTVKPLYDALVVQCHKEESIADNILNAVTR
407743..407975                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01970; phage(gi100015)     2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumMHSLNKALSLTARGILRFKHDISESVLSPITITHPDTLAHSWRRGREFYTKENPALDWASRWAASIVGDQTRLWSAG
407979..408497                     PHAGE_Bacill_Mater_NC_027366: dihydrofolate reductase; D6D39_01975; phage(gi100060)     5.88e-28            SalmonellaentericasubspentericaserovarTyphimuriumMLSENAKDIAGYEGKYAITTDGRVYSHSRVDTRGKLRKGRWLKPREHGGGYLQVSLCDKGKVKQLYIHRLVAITFIDNPRSHPQVNHINGIKTDNNTSNLEWVTPSQNMLHAHESGLQVAIKGEGHYRAKLTTEQVSEIRSRKSMSRSDMARKYGVDPSQISNIINNKRWVI
408722..409048                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_01980; phage(gi100017)     3.04e-73            SalmonellaentericasubspentericaserovarTyphimuriumMKKMPEKHDLLTAMMAAKEQGIGAILAFAMAYLRGRYNGGAFKKTLIDATMCAIIAWFIRDLLVFAGLSSNLAYIASVFIGYIGTDSIGSLIKRFAAKKAGVDDANQQ
409032..409469                     PHAGE_Entero_UAB_Phi20_NC_031019: exonuclease A; D6D39_01985; phage(gi100018)        4.06e-99            SalmonellaentericasubspentericaserovarTyphimuriumMQISSNGITRLKREEGERLKAYPDSRGIPTIGVGHTGKVDGNPVVSGMTITSEKSSELLKEDLQWVEDAISSLVRVTLNQNQYDALCSLIFNIGKSAFAGSTVLRQLNLKNYQAAADAFLLWKKAGKDPDILLPRRRRERALFLS
409487..409936                     PHAGE_Salmon_118970_sal4_NC_030919: clamp-loader subunit; D6D39_01990; phage(gi100040)     3.43e-86            SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVSGRLANHYRDNAISYKEQRDNKASELEKANATITDMQQRQLDADALDAKYTKELADEKAENDALRRKLDNGGRVLVKGKCPVPSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQTALRTLQEYIRTQCLK
410149..410670                     PHAGE_Salmon_SPN3UB_NC_019545: KilA-N domain protein; D6D39_01995; phage(gi423262448)     1.33e-127           SalmonellaentericasubspentericaserovarTyphimuriumMNIVPLNYKGEPIRFNTDGWINATDIAKRFGKRLDHWLSNTETLEYVRALDEVYSGEPSKILHTRDSGYVKTSKARKDRGGGTWLHPKLSVAFARWCDPKFSVWCDLHIDSLLRGELTEQQKYEQACRIRDDRKSKASNGAREMARWRWDKPVIEANVEYWREQLQLTLDIAC
410994..411236                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02000; phage(gi100023)     4.02e-48            SalmonellaentericasubspentericaserovarTyphimuriumMAEITALTELQQMNLDILRLVQSDTAAAEKAIAFVAGSKLNFELFKDQLVLAQGEGTALARAEKAIREAKEALDLFTAGA
411240..411629                     PHAGE_Entero_UAB_Phi20_NC_031019: DCTP pyrophosphatase; D6D39_02005; phage(gi100024)     2.21e-94            SalmonellaentericasubspentericaserovarTyphimuriumMAKTKWPKLPRFFVPLFHSANVYLCRSKEEWDQACIHLGVGSGGNEMLAGATQSYCNTETGENLYLLGVFNGEAATLVHECAHVAFYVCRDVGVTTYPGDANETYCYMLDRMFSHFLPFFHEPEKEGAK
411629..412033                     PHAGE_Entero_UAB_Phi20_NC_031019: DNA primase subunit; D6D39_02010; phage(gi100025)     5.63e-93            SalmonellaentericasubspentericaserovarTyphimuriumMANPNFTPSWPLYKDADGVYVSALPIKAIKYANDGSANAEFDGPYADQYMSAQTVAVFKPEVGGYLFRSQYGELLYMSKTAFEANYTSASGSVANAETADKLSTARTITLTGAVTGSASFDGSANVTIETTSGS
412037..412525                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02015; phage(gi100026)     9.07e-119           SalmonellaentericasubspentericaserovarTyphimuriumMAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWVEANPLWEMKAFSYQGEVTQEPIAKMRAMTITGLTLFLDVTLETWRQYRVREDLSEVVTRAEQIIYDQKFSGAAADLLNANIIARDLGLKEQSQFEDVTPDKGDRDKRRSRIKELFNRGTGRDS
412503..414002                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_02020; phage(gi100002)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWVGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTPEGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWDKDADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQLKTQYADAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKVFNTCEPFFEEFRLYHRDENGKIVKTNDDVLDATRYGYMMRRFARMMRDIRKPKEKKIPAPIRPVRRGR
414002..416179                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02025; phage(gi100028)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADNENRLESILSRFDADWTASDEARREAKNDLFFSRISQWDDWLSQYTTLQYRGQFDVVRPVVRKLVSEMRQNPIDVLYRPKDGASPDAADVLMGMYRTDMRHNTAKIAVNIAVREQIEAGVGAWRLVTDYEDQSPTSNNQVIRREPIHSACSHVIWDSNSKLMDKSDARHCTVIHSMSQNGWEDFAEKYDLDADDIPSFQNPNDWVFPWLTQDTIQIAEFYEVVEKKETAFIYQDPVTGEPVSYFKRDIKDVIDDLADSGFIKIAERQIKRRRVYKSIITCTAVLKDKQLIAGEHIPIVPVFGEWGFVEDKEVYEGVVRLTKDGQRLRNMIMSFNADIVARTPKKKPFFWPEQIAGFEHMYDGNDDYPYYLLNRTDENNGEMPTQPLAYYENPEVPQANAYMLEAATAAVKEVATLGVDAEAVNGGQVAYDTVNQLNMRADLETYVFQDNLATAMRRDGEIYQSIVNDIYDVPRNVVITLEDGSEKEVQLMAEVVDLATGERQVLNDIRGRYECYTDVGPSFQSMKQQNRAEILELLGKTPQGTPEYQLLLLQYFTLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGDEQTHKQRMDIANILQSQRQNQPSGSVAETPQ
416193..417104                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02030; phage(gi100029)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMEPTTEIQATEDLTLSGDHAAASADSLVVDNANDNAGQEEGFEIVLKDDETAPKQDPAKNAEFARRRIERKRQRELEQQMEAVKRGELPESLRVNPDLPPQPDINAYLSEEGLAKYDYDNSRALAAFNAANTEWLMKAQDARSNAVAEQGRKTQEFTQQSAQYVEAARKHYDAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKARQLLAMDGQSALIELTRLSERLTLKPRGKQISSAPPADQPITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR
417104..418396                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02035; phage(gi100030)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMALNEGQIVTLAVDEIIETISAITPMAQKAKKYTPPAASMQRSSNTIWMPVEQESPTQEGWDLTDKATGLLELNVAVNMGEPDNDFFQLRADDLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVITSPDAIGTNTADAWNFVADAEELMFSRELNRDMGTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPVLTKSTATGITVSGAQSFKPVAWQLDNDGNKVNVDNRFATVTLSATTGLKRGDKISFTGVKFLGQMAKNVLAQDATFSVVRVVDGTHVEITPKPVALDDVSLSPEQRAYANVNTSLADAMAVNILNVKDARTNVFWADDAIRIVSQPIPANHELFAGMKTTSFSIPDVGLNGIFATQGDISTLSGLCRIALWYGVNATRPEAIGVGLPGQTA
418435..418644                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02040; phage(gi100031)     1.32e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKIAIYKPGGSIMVWGVMAQMKVIDSSELPEYVKDGWLDHPSKLLPVEADDVKPRKGRKPKAVSDADKD
418628..419128                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02045; phage(gi100032)     2.24e-122           SalmonellaentericasubspentericaserovarTyphimuriumMQIKTKGDLVRAALRKLGVASDATLTDVEPQSMQDAVDDLEAMMAEWYQDGKGIITGYVFSDDENPPAEGDDHGLRSSAVSAVFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAISRAKRAPYPSRMPTGSGNSFANLNEWHYFPGEQNADSTTPHDEGNG
419088..420506                     PHAGE_Entero_UAB_Phi20_NC_031019: replication and recombination DNA helicase; D6D39_02050; phage(gi100033)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPIQQLPMMKGMGKDFKNADYIDYLPVNMLATPKEILNSSGYLRSFPGITKRYDMNGVSRGVEYNTAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
420510..421148                     PHAGE_Entero_UAB_Phi20_NC_031019: membrane-associated initiation of head vertex; D6D39_02055; phage(gi100034)     1.72e-97            SalmonellaentericasubspentericaserovarTyphimuriumMADPSLNNPVVVQATRIDASILPRNIFSQSYLLYVINQGTDVGSIAEKANQAGGGAYDAQVRNDEQDLILDEHEKRIAKTEEDISGIKVKLLEIENDVNGLKIKVQDIEGKVSEIIVDYVSLSRTGTQTLSSSLSVSGNYSVNGTKVVGARQTGWTAATGTANKGVFNADLTFTVSDTYTQSEIQAIANALIAERRRTKALEDTLRAHGLID
421148..421603                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; D6D39_02060; phage(gi100010)      9.87e-111           SalmonellaentericasubspentericaserovarTyphimuriumMITFTPTRNIDLIETVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYNEIQPLTFDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYAATREELIDFLNHGR
421606..422295                     PHAGE_Entero_UAB_Phi20_NC_031019: DNA polymerase; D6D39_02065; phage(gi100036)       2.10e-153           SalmonellaentericasubspentericaserovarTyphimuriumMLYAFTLGRKLRGEEPLSPGKGGKGGADKSAKYAAEAQKYAADLQNQQFNTIMNNLKPFTPLADKYIGSLEGLSSLEGQGQALNNYYNSQQYQDLAGQARYQNLAAAEATGGLGSTATSNQLSAIAPTLGQQWLSGQMNNYQNLANIGLGALQGQANAGQTYANNMSQISQQSAALAAANANRPSAMQSAIGGGASGAIAGAGLAKLIGSSTPWGAAIGGGIGLLGSLF
422306..423721                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02070; phage(gi100037)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMATWQQGINSGGFLAGIGAQNENAPKARDINATLGLIRENNDLARSGANNVALTGLRGLAGVADIYNQEQQQKALNAFNQVHANAWATGDPSGLFKFAQENPAFVAQAQQAFSGLNEQQRNDMGDLAMKANVALSQGPEAYSKFITDNKDRLNRVGANPDWMIQTGVQNPEQLSHMLTTMSLGALGPEKAFAVQDKMVGREIDRGRLAETIRSNKAGEGLQARGQNITMRGQDMSAATARRGQDLATQRANARTISGSEGNRVVQLADGRTVSVGGKLHGAGANAFYEGIDDNGNMVRVPASAIAAPPTSAASAQNYAMKKDIDAIANADASALDFMTGMTGGAGNPAIGADVRSRLTGKEQRQLYNSAQRIQERMQNQGVAAARDMGASGINTIAEAKMYFQGMPQVDYSSPEAMQQSIREIQEYTNNYNQQYNVNVGNGGLKSPRQQPDTQQSAGGSYTSKSGIKFTVE
423721..425550                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02075; phage(gi100038)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKVTANGKTFNFPDGTSTEDIGAAVDEYFAGQASAAETQPAEQQEEPQQPEQSLMQRAGDLLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGESIGGYLIPGAGVAGNMAIGSVAEAANQQGDFAGNVAKNAAVNLGAQGLLSGAAKLVGRGITAARGEIAPEARQLIDTAESMGVKPMTSDMIKPGNAFTRSLMQGGEGALLGTGGKRAEQYAIRSKLLGDYFDRVGGYNPDDIVKSMTSTVGGRKNAAGAVRDEIVNRMGSAPVGTTNSINAIDTNIARLEKLGTSADQRLLTALKNLKGELNSGNVDFDLLQQHRTAFRTNVQGDAMVFPNQAKAATNMVENAMTRDLRNAVGKSLGPQDAAKYLKSNSDFANIYNKVLNKRISNTLNKARSEYTPELINTVVFSRKPSDIKRIWSSLDNKGKDAMRAAYISKIAEKTGDSPAKFITEVNKLKAQSGGEIYNTIFSGRHMKELDALHDVLRQTARSDSANVVTQTGQALANPVRLGAAIPTLGKSLAAEAGYGLAMRVYESKPVRNMLLRLANTKPGTPAYERALNQAATAVRPLLANQATQQ
complement(425568..425897)         hypothetical protein; D6D39_02080                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLEIIVFVLGIACCALYAELVALKKKVKALDHQYEIDAKIERLTEENTHLKNSIRTLTDDNYKLSNALAKWEIVSYERMTDMIFSSYMATKSPETSGKGIIAAIEKRIK
425928..426293                     PHAGE_Entero_UAB_Phi20_NC_031019: clamp-loader subunit; D6D39_02085; phage(gi100040)     1.21e-86            SalmonellaentericasubspentericaserovarTyphimuriumMKKVNIGNVPKMLVPLFESGTIVFCRDFPEWQRLHQKLGVDVQDSDANGASHTMSSENGVLHVIGVFNGKLSTIAHECAHMAFDICSRVGVDVESGRANETYCYLMSRLVEFCERHIKKPE
complement(426307..426486)         PHAGE_Entero_UAB_Phi20_NC_031019: clamp-loader subunit; D6D39_02090; phage(gi100041)     1.14e-35            SalmonellaentericasubspentericaserovarTyphimuriumMAKKPGENTGKNGGIYQEVGPRGGKKDNFATVKDNERLPPTTKPGNGWVLDKRTPDSKK
complement(426586..426837)         PHAGE_Entero_UAB_Phi20_NC_031019: sliding clamp DNA polymerase; D6D39_02095; phage(gi100042)     6.26e-56            SalmonellaentericasubspentericaserovarTyphimuriumMARDDPHFNFRMPMEVREKLKFRAEANGRSMNSELLQIVQDALSKPSPVTGYRNDAERLADEQSELVKKMVFDTLKDLYKKTT
426928..427089                     PHAGE_Salmon_103203_sal5_NC_031946: hypothetical protein; D6D39_02100; phage(gi100020)     2.43e-32            SalmonellaentericasubspentericaserovarTyphimuriumMKGMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA
427158..428060                     PHAGE_Salmon_118970_sal4_NC_030919: aerobic ribonucleotide reductase B subunit; D6D39_02105; phage(gi100063)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSIAILEAVNTSYVPFNGQHVLTAMVAGVAYVAMKPVVDNIGLSWSSQVQKLLKMKDKFNYVDIDMVAGDMKKRLMGCIPLKKLNGWLFSINPEKVRADIRDKLIKYQEECFTVLYDYWTKGKAENPRKKTSVDERTPLRDAVNMLVSKKHLMYPEAYAMIHQRFNVESIEELEASQIPLAVEYIHRVVLEGEFIGKQEKKTNDLSAKEANSLVWLWDYANRSQALFRELYPAMRQIQSNYSGKCYDYGHEFSYIIGIARDVLINHTRDVDINEPDGPTNLSAWMRLKDKELPPSLHRY
428271..430274                     PHAGE_Salmon_ST64T_NC_004348: tail spike protein; D6D39_02110; phage(gi24371597)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTDITANVVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSEYPTLQDAASAAVDGLLIDVDYHFYNGEKVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQGLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGPGSGSAWTQLTAISGNTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
complement(430333..431790)         PHAGE_Salmon_118970_sal4_NC_030919: protector from prophage-induced early lysis; D6D39_02115; phage(gi100001)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKFNSNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGRSLYGGLGWSGNGRPLSDFIFYIINFGTPIIDASPLPLMLGIVILALALSCVREKLFGDDYITASLCFMMILANPFFIENLSYRYDSLTMCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIFLLAFIISDVVKKNSISNITKNTASSIAGLIVGYFAYSYFIAKRLVTGSYNIEHSKIIEINSSLFEGIISNVLSFYRMFSTILNGDNYLIYYSLFFALIISLIVIVLKVIKRDENKKTKFLLVVLILLASMFFIIGPMIFLKSPIYAPRVLIGMGGFMFFCCLCVFYAFEDKQLISRIYFSFILLISTIFSYGAYNAINAQFQLEESIVNRISQDIDYLGFGRDKKNIKFIGTEPYASINENIVIKHPLMRELIPRIINNNWMWSEVLMQRNVFSRNYRLYDKEVKLENGWKKSGNNVYDIGVVGETIVVRFN
complement(431780..432712)         PHAGE_Entero_UAB_Phi20_NC_031019: rnaseH; D6D39_02120; phage(gi100048)               0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRPKYILKRKGFKSEI
complement(432709..433071)         PHAGE_Entero_UAB_Phi20_NC_031019: RNA polymerase sigma factor; D6D39_02125; phage(gi100049)     4.23e-83            SalmonellaentericasubspentericaserovarTyphimuriumMLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNATTTTLRYMMYVGFMGTLSAVVGWMADQCSLPPLITLITFSAISLVCGFIYSRFIVFRDIR
433188..433367                     PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; D6D39_02130; phage(gi100050)     6.27e-19            SalmonellaentericasubspentericaserovarTyphimuriumMIVVTDQFLLLIAKWFGTKTGHTKLCIGLQGFACFSKMGRVSAGMTRYVVDLKGSSYNS
433360..433406                     attR                                                                                 N/A                 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAT
complement(433656..434435)         PROPHAGE_Escher_MG1655: IS3 transposase B; D6D39_02135; phage(gi16128284)            6.35e-160           SalmonellaentericasubspentericaserovarTyphimuriumYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSREIMRTAVFNYSECDYNRRRHSACGGLSPEQFENQNLA

#### region 2 ####
1042051..1043997                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; D6D39_05095; phage(gi371496158)      2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
complement(1044127..1044348)       PHAGE_Lactoc_bIL312_NC_002671: Csp; D6D39_05100; phage(gi13095918)                   1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
1044672..1044992                   PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; D6D39_05105; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumMGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
1045021..1047297                   PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; D6D39_05110; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
1047487..1047945                   PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; D6D39_05115; phage(gi300116744)      1.70e-18            SalmonellaentericasubspentericaserovarTyphimuriumMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
1048118..1048393                   hypothetical protein; D6D39_05120                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSSGNRRVKCEKKSVLSYELFLEYGGEGGLTRCARPSGSLLAGSSFVQLAAPLLSPSLGLAPSGPEQALFKNAPGVFVSNPGRVFSSPL
complement(1048408..1049663)       PROPHAGE_Escher_CFT073: transposase insF; D6D39_05125; phage(gi26249410)             1.83e-39            SalmonellaentericasubspentericaserovarTyphimuriumMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD

#### region 3 ####
complement(1119148..1120350)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; D6D39_05410; phage(gi100242)     2.14e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1120496..1120510                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1120545..1121837)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; D6D39_05415; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGKSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMIAAQ
complement(1121882..1122130)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; D6D39_05420; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1122171..1122410)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05425; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1122453..1123610)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; D6D39_05430; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
complement(1123573..1126773)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; D6D39_05435; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPSVTLPSSEAAAAARQHIVDGVDTETGEVLEDHNENFGNESNSPSPAKAPAPELTVVATMPLRHRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKRMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYAYAPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPAGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELYEARKNIPPKSPVDVGKQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1126900..1127250)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05440; phage(gi169257273)     7.04e-45            SalmonellaentericasubspentericaserovarTyphimuriumMKDSPLIWRGFLHPEFKTGELMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKIDYSEKFYQTIH
complement(1127299..1127430)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05445; phage(gi169257274)     1.01e-22            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNILLYRNGSQLARKEKEYCSRQCA
complement(1127727..1128161)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; D6D39_05450; phage(gi169257276)     1.25e-42            SalmonellaentericasubspentericaserovarTyphimuriumMMNMKTEQHENFVRRLQLIQDQTGWNLSEIARRVMVSPQAVQQWAKGDTTPRGERLKRLAAVTGKPEHWFFMPLDANEPSNSLSEIPTSSSRDMLDDKEKALLALFNQMPEAEKNRLIVHAKATLQELDLLKDDVLSIIKNIRE
1128267..1128494                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; D6D39_05455; phage(gi169257277)     5.71e-17            SalmonellaentericasubspentericaserovarTyphimuriumMNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD
1128529..1128849                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; D6D39_05460; phage(gi169257278)     1.49e-72            SalmonellaentericasubspentericaserovarTyphimuriumMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1128934..1129917                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; D6D39_05465; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVLETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRVSPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1129920..1130669                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; D6D39_05470; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
1130680..1131027                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05475; phage(gi169257281)     2.62e-76            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTHSERTIILERIIGLVKEQWRITTNDVVAMFGVHRTTAEKYLQIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1131024..1131482                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; D6D39_05480; phage(gi169257282)     1.63e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPRTMLALLDENIQLQRGKDAIEAVALALRDDMRDAREKLEAAEHRIAEHRKVLNSIAAVARRYLPDYDEHPEIQAADELLESAAGIGVKGE
1131486..1131794                   PHAGE_Caulob_karma_NC_019410: hypothetical protein; D6D39_05485; phage(gi414089390)     1.27e-06            SalmonellaentericasubspentericaserovarTyphimuriumMKTKKYDERKDLDLWFGLSYAAFLVMPRVAMMQMPEEWREKMAELLNQYDETIDTAAFGVKGCRVNALTGDGKLMKMPAELLNYRHPQPETVEALLLSKGEG
1131798..1132442                   PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; D6D39_05490; phage(gi423262432)     2.62e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTTITREQQKQILIDTANHVISRDNTSPYSENLRELARIALAQLIAEPVERDGADADPVVFTDERNLHHIARGRETSLIWGKQNQEVGDIPLYRHAQPAPVVPEEIPKGLADQIVSLLAHNIGDKFLAQKIWNACRAAMLQGNQAPVKQPSSNSENVPVISDGWVMVPVELTDDMIAAAMNCDDVLFNRDESFCVQFGNIYAAMIAAAPQQEAE
1132442..1132699                   PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; D6D39_05495; phage(gi100124)     1.62e-08            SalmonellaentericasubspentericaserovarTyphimuriumMDQLLQYATNRIIELESLLLVDIQETVWPTEVKMVFSQVDNAGDLPAHHQRRLLHHINRMWLEKMPESDTFLAASEPGPIAFAFR
complement(1132754..1133731)       DUF4868 domain-containing protein; D6D39_05500                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFTAIDNILNSTQLSGEAYFVAEHQGQLDIFRVALEPGAEQKLTQSFSRSLKRDVVDPNTGQNTLPLVSSLLSRDKQVHEYDHQVINYLPPALAKMADVLSFGVNNTPTDFDFAQQNLSTVKGIVYYLCDGQGNGVVVYQHKYPIALHKKTKLSYFSANGRTLDEVTHDSIDINGNVDFFYFDNKYYALNINLLERAYGLEQVINNLAANATPHIIALNILDVSNHPNPADIFNDMHRNRNFMRRLATTANSPLLQNGTINIANIQTLIQNFPILGRNIIINQAGLIELSSKKQKLYFIRLLNNEASFTALNLEPFLAVGKDSAA
complement(1133743..1134339)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; D6D39_05505; phage(gi90592714)     1.57e-05            SalmonellaentericasubspentericaserovarTyphimuriumMKKRTGLKYALYILSLWLLFVSLFIMSYDKNLFVSISTYLDSKDTGTLLSSITPKNIVFISSFAMIVAGVLIFLYLLLSFNSGWSVACTVSDVRNESHEHLEFLTTYVMPLVFTDVNSKRTMLNLLIMIVAIGMIYVKTNRFYSNPSLALLGFRIFKANINDRGTKEFVIICHGEIDNNSRIKYIKLDNNTCLAKITQ
1134931..1135164                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; D6D39_05510; phage(gi169257284)     3.91e-30            SalmonellaentericasubspentericaserovarTyphimuriumMKVELTIDRTKKLPDGAEAALEKELLKRLNNQYEDCSLVIRRAGSDGLNVYGAAKDDKKQIEMILLETRESADDWFY
1135274..1135495                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; D6D39_05515; phage(gi169257285)     2.26e-30            SalmonellaentericasubspentericaserovarTyphimuriumMADIVQSDLADNFRVTITNGRGLEVLSFRIRAEERYIITSRDGAVTPRKLSRDDLYWSKETIMEVVREMASKN
1135580..1136182                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05520; phage(gi169257286)     2.22e-145           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNEGALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1136182..1136388                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05525; phage(gi169257287)     1.06e-43            SalmonellaentericasubspentericaserovarTyphimuriumMAMKYSWFHHHDCTTEQADTLISDYQKRGIRTEKSLNPDFITWTVSVKLPEYAHRVRTPKSLRQKVWG
1136391..1137002                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; D6D39_05530; phage(gi169257288)                 4.16e-144           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAHEAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRTTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1136999..1137139                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05535; phage(gi169257289)     2.98e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
1137136..1137825                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; D6D39_05540; phage(gi169257244)     3.64e-126           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITRWAWCEFRQQLAGRKMAGKTVERLKKLIWLAAQDVREGLAGRYVYQQQELASLCGVKPDNWSHNYADYWRAMSNIFKRLDTESLLCLVKTRSQQKATFSQQGIAKVN
1138020..1138145                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05545; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(1138281..1138730)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05550; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1139091..1139777)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; D6D39_05555; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1140053..1140382                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; D6D39_05560; phage(gi169257295)     7.80e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGAIRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1140366..1140818                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; D6D39_05565; phage(gi169257296)     2.33e-106           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1140836..1141282                   PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; D6D39_05570; phage(gi966201480)     6.43e-92            SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCSVPTRTETASTRRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYVRTQCE
1141751..1142296                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; D6D39_05575; phage(gi169257236)     2.06e-89            SalmonellaentericasubspentericaserovarTyphimuriumMKVNKKRLAEFFNVDPRTIERWQSQGMPLASGGGKGVEAVFDSAAVIEWYAERDASIENEKLRKEVDDLRAAAESDLVPGTIDYERYRLTRAQADAQELKNAERKSEVMDIELFTYILQRIAQEIVGILSRLPLTLQRKYPDLTTEHIDAIKTEIAKASDKAATIADVEKWVDDFRRTSGE
1142268..1142978                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; D6D39_05580; phage(gi169257235)     2.07e-162           SalmonellaentericasubspentericaserovarTyphimuriumMTSGERQANNANRAITNGLIALHIPVPLTAVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGNDRIRVVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRNNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVSCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKAKGTCQIDKAANESAHFMRFH
1142971..1143420                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; D6D39_05585; phage(gi169257310)     4.94e-95            SalmonellaentericasubspentericaserovarTyphimuriumGSTVLGMFGFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
1143417..1143749                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; D6D39_05590; phage(gi169257311)     3.22e-77            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPPLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
1143849..1144346                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; D6D39_05595; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1144463..1144996)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; D6D39_05600; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1145086..1145781                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; D6D39_05605; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1145791..1146528                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; D6D39_05610; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
1146426..1147130                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; D6D39_05615; phage(gi169257316)     9.79e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQTDNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
1147334..1149688                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; D6D39_05620; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKK
1150591..1150833                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; D6D39_05625; phage(gi169257319)     7.64e-54            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
1150887..1153325                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; D6D39_05630; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNVLRLTGTGDGEILIGWSGVNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAPIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1153325..1153906                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; D6D39_05635; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(1153910..1154236)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; D6D39_05640; phage(gi100034)     5.49e-23            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
1154382..1155350                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; D6D39_05645; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1155448..1155866                   PHAGE_Stx2_c_1717_NC_011357: transposase; D6D39_05650; phage(gi209447153)            1.08e-05            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTGAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(1155998..1156624)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; D6D39_05655; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1156693..1156992)       hypothetical protein; D6D39_05660                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGSEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
complement(1156977..1157663)       virulence protein; D6D39_05665                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(1157934..1158125)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; D6D39_05670; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1158431..1158445                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 4 ####
1972654..1973022                   PHAGE_Entero_HK022_NC_002166: integrase; D6D39_09885; phage(gi9634144)               6.28e-24            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
1973157..1973179                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1973508..1973708)       hypothetical protein; D6D39_09890                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
1974326..1975240                   DMT family transporter; D6D39_09895                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
1975373..1975531                   hypothetical protein; D6D39_09900                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1975541..1976155                   disulfide bond formation protein B; D6D39_09905                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1976482..1976628)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; D6D39_09910; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarTyphimuriumIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(1976908..1977174)       hypothetical protein; D6D39_09915                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
complement(1977303..1977428)       arsenic transporter; D6D39_09920                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
1977691..1977807                   PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; D6D39_09925; phage(gi966201445)     2.99e-06            SalmonellaentericasubspentericaserovarTyphimuriumMWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
1977998..1978198                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; D6D39_09930; phage(gi169257211)     3.94e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(1978295..1979176)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; D6D39_09935; phage(gi169257205)     1.08e-89            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAEEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1979334..1979594)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; D6D39_09940; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1979649..1979837                   hypothetical protein; D6D39_09945                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
1979902..1980069                   lytic enzyme; D6D39_09950                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1980326..1980859)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; D6D39_09955; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1980913..1981143)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; D6D39_09960; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1981333..1981827                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; D6D39_09965; phage(gi985761253)     8.72e-21            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1981887..1982741                   PHAGE_Entero_HK022_NC_002166: integrase; D6D39_09970; phage(gi9634144)               1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
1982872..1982894                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1983115..1983468)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; D6D39_09975; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(1983485..1984360)       copper homeostasis membrane protein CopD; D6D39_09980                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1984361..1984732)       CopC domain-containing protein YobA; D6D39_09985                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIERFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1984870..1985100                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; D6D39_09990; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1985208..1985864                   carbon-nitrogen hydrolase family protein; D6D39_09995                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1985888..1986586                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; D6D39_10000; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 5 ####
2082013..2082024                   attL                                                                                 N/A                 TCACCAGGATAT
complement(2094041..2094253)       PHAGE_Lactoc_bIL312_NC_002671: Csp; D6D39_10590; phage(gi13095918)                   1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
complement(2094708..2095976)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; D6D39_10595; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
complement(2095979..2096398)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; D6D39_10600; phage(gi399528789)     2.45e-40            SalmonellaentericasubspentericaserovarTyphimuriumMEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
complement(2096525..2096686)       hypothetical protein; D6D39_10605                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
complement(2096664..2096906)       hypothetical protein; D6D39_10610                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVSPSYAFSARRGGQGWCYFYFSIISQLLVFCPALSPYPIWINIDVTRGDLTPSSSVIVAPGLLPDMFPCRHGRRAED
2097036..2097050                   attL                                                                                 N/A                 CGGTTTTCGAGACCG
complement(2097347..2097427)       PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; D6D39_10615; phage(gi23505471)     1.73e-08            SalmonellaentericasubspentericaserovarTyphimuriumQPVAIIYDVALSTHGLYWILLSADRK
complement(2097405..2097548)       PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; D6D39_10620; phage(gi966201576)     1.77e-18            SalmonellaentericasubspentericaserovarTyphimuriumQKSQDPGIATDDEKAQLDEWKKYRVLVNRVDTSNPDWSEKPASSDYL
2097880..2098092                   PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; D6D39_10625; phage(gi100103)     7.46e-42            SalmonellaentericasubspentericaserovarTyphimuriumMNTLDISSYPPNLLSDIEIIYGKALLQLILESKKINSENLISQLKHEQKEQQWLEDKEPLSTALKILDKS
2098089..2098502                   PHAGE_Salmon_118970_sal3_NC_031940: baseplate distal hub subunit; D6D39_10630; phage(gi100102)     2.23e-97            SalmonellaentericasubspentericaserovarTyphimuriumMKSSITLSSLLVLTVIITGCSSGKSKDDYSQVDGIYFWGQDISAFQPCHTRQIYWLNGEKTTLRSLKKHHSTNKNVYASLIVHNDGYQDKGSSGTYDETLMLEKIISTDNSKNHADCLNFIIPSKKHKVTSKNELSR
2098550..2098663                   PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; D6D39_10635; phage(gi100101)     5.29e-18            SalmonellaentericasubspentericaserovarTyphimuriumMDNTLIIISLLIIFSIFSYAVIKVGIGISNNPDKTDE
2098738..2098971                   PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; D6D39_10640; phage(gi100103)     1.45e-05            SalmonellaentericasubspentericaserovarTyphimuriumMKSKDTLKWFPSQLPKVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKAKAWLDNKELLQTAVSVLKENQDANGKI
complement(2099085..2099690)       PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; D6D39_10645; phage(gi23505469)     3.19e-128           SalmonellaentericasubspentericaserovarTyphimuriumMVYRTRGNGIMKKYQDIKNFRLIDAPVNRGKTQSEINIGAFFLESEDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYAVSMLWPVNMSVAEIAAADCPDDCRGDGMWLYQDGKVAQRVHSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLDAWELYSVMVNRVDTASPDWPDVPVSQ
complement(2099660..2101222)       PHAGE_Salmon_ST64B_NC_004313: tail protein; D6D39_10650; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLEETINLAADALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGSLGIGTDNALGGNSIVLGDNDTGFKQDGDGVLGIYANNARVGYIDNSGLHMSVDVLTNGGIRAGDGKRLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGIAYAPLQKRVGNQWYTVQGGTA
complement(2101209..2101796)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; D6D39_10655; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
complement(2101799..2102878)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10660; phage(gi100096)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGADTEELETWRARVMERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
complement(2102871..2103284)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; D6D39_10665; phage(gi23505464)     9.60e-95            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRKDATASLDLLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSELNG
complement(2103289..2103822)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; D6D39_10670; phage(gi23505463)     5.75e-128           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVINGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPVQPMS
complement(2103822..2104880)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; D6D39_10675; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDAVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGKNLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(2104877..2106217)       PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; D6D39_10680; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPSAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAILTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(2106251..2108179)       PHAGE_Salmon_ST64B_NC_004313: tail protein; D6D39_10685; phage(gi23505460)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALVLPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFKLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGKSATKSQKEALRALRISPTKLAAEMQKDSKTAILKVLDSLSKLSATDRPQILTRLFGKESIGAIAPLLTNMDLLRTNFERVTDAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
complement(2108264..2108590)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10690; phage(gi23505501)     1.46e-72            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLYVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
complement(2108587..2108943)       PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; D6D39_10695; phage(gi23505459)      2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
complement(2108943..2110439)       PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; D6D39_10700; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNTMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANNSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
complement(2110429..2110593)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10705; phage(gi23505457)     7.53e-32            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRTNKKVKTNGN
complement(2110597..2111157)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10710; phage(gi23505456)     2.54e-134           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDPQAHEIQYTGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
complement(2111154..2111666)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10715; phage(gi23505455)     1.69e-120           SalmonellaentericasubspentericaserovarTyphimuriumMPQKAYLHVDYVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
complement(2111638..2112042)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10720; phage(gi23505454)     1.15e-94            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNSKRRFLLLECEALGTDNGSDYAAESIFTR
complement(2112039..2112362)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10725; phage(gi23505453)     2.93e-73            SalmonellaentericasubspentericaserovarTyphimuriumMLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
complement(2112365..2112565)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10730; phage(gi23505452)     4.37e-41            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGLRVEIIRAGEHDDRILPARAQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
complement(2112616..2113821)       PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; D6D39_10735; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPAGGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(2113836..2114486)       PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; D6D39_10740; phage(gi23505450)      3.83e-156           SalmonellaentericasubspentericaserovarTyphimuriumMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
complement(2114464..2115705)       PHAGE_Salmon_ST64B_NC_004313: Portal Protein; D6D39_10745; phage(gi23505449)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCSLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(2115705..2115887)       PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; D6D39_10750; phage(gi23505448)     4.87e-35            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
complement(2115899..2117632)       PHAGE_Shigel_SfIV_NC_022749: large terminase subunit; D6D39_10755; phage(gi557307528)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAERAAKFIQLLPHTKGEWAFKRMPITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPITIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(2117629..2118123)       PHAGE_Salmon_118970_sal3_NC_031940: co-chaperonin for GroEL; D6D39_10760; phage(gi100075)     2.80e-117           SalmonellaentericasubspentericaserovarTyphimuriumMAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKIIES
complement(2118247..2118597)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10765; phage(gi23505500)     1.98e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
complement(2118648..2118980)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10770; phage(gi100133)     5.28e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPVNIDPEQLNDEREQVIAKWLFKDVDLISQQIELGEENVKRFDELLSIFDCCQSSWFATEHLFDNTELEKVWHEFESNFNKYINGGESKDLLMKMLDKLISSRFVFESR
complement(2119280..2119558)       PHAGE_Entero_SfV_NC_003444: putative Rz1 lytic protein; D6D39_10775; phage(gi19549039)     5.03e-35            SalmonellaentericasubspentericaserovarTyphimuriumMMIVLHVLCLMSLLTGCGSTRTVYVQVPTMPLPANLLAETPQPVIPNPLTYGDSLSLNVSLLSALGLCNRDKSDLRRLGEQKYNLHLNNNIH
complement(2119443..2119835)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10780; phage(gi100132)     1.01e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKMSYWALILTFIACVAGGLVWSANHYHGKFLEEQKRADAAEQRADSTEAITENVLRTMAITNIIQEANQHAKQQIALESQRTQEDIKVAVADDDCASRPVPDVAADRLRKYADSIRAGSNDAVTGEPAR
complement(2119832..2120446)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10785; phage(gi100131)     1.54e-150           SalmonellaentericasubspentericaserovarTyphimuriumMNQQLFQKAAGISAGQAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
complement(2120446..2120727)       PHAGE_Entero_mEp390_NC_019721: putative holin; D6D39_10790; phage(gi428782713)       2.26e-26            SalmonellaentericasubspentericaserovarTyphimuriumMELNDPTATINALLCACVVITLMFYRRGDSRHRPWVSRLAWLITVTYSAVPLAYLCGIYPHSSWPIIVANTIFLSVLVAVRGNVARLVDHLRH
complement(2120714..2121100)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10795; phage(gi100130)     6.27e-82            SalmonellaentericasubspentericaserovarTyphimuriumMSDPISGTGLAGGALTGASVYGLLTGTDYGVVFGAFAGAVFYIATAADLSASRRLAYFIVSYIAGILCSGLVGSKLANLTGYSDKPLDAIGAVIVSALAVKILTFLNNQDIGSLVALITRRGGSGGAK
2121128..2121316                   hypothetical protein; D6D39_10800                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLSDMRGRDLNDSLSIISDRLKPDYISEEAAEFLRSLKLSVKHYPVDYFSEADLTPWGNSTFR
complement(2121246..2121503)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10805; phage(gi23505494)     1.02e-35            SalmonellaentericasubspentericaserovarTyphimuriumMQGEKQQPYFFNPGMTVEQLEDWLEQQKLHLSRYNRLVKEKAELEERLSDISVEIERMSAGGFNGKLSFPRESSPPLRNNQQGSV
complement(2121654..2122406)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10810; phage(gi100128)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLEALPKYYSPKSPKLSDDAPATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKVGVQDPQFAIEGLLNHAMALDNPTLNKLSEETRLQIIPYLVNFAFADYSRSAASKARCEHCAGTGFHNVLREVVKHSRSGVSVIKEEWGKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHGTPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQWYKGYADIIDKLVTKCWQEEAYAEAQLRKVTR
complement(2122420..2123409)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10815; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGVVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(2123417..2124277)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10820; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYVMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2124294..2124683)       PHAGE_Salmon_ST64B_NC_004313: holiday-junction resolvase; D6D39_10825; phage(gi23505489)     1.05e-91            SalmonellaentericasubspentericaserovarTyphimuriumMRLVLPFPPSVNTYWRAPNKGPLAGRHLISAVGRKYQSAACVAIIEQLRRLPKPSTELAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAD
complement(2124680..2125573)       PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; D6D39_10830; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
complement(2125573..2126055)       PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; D6D39_10835; phage(gi23505487)     3.66e-117           SalmonellaentericasubspentericaserovarTyphimuriumMSLMGDVQKFIESHPGCTSSDIANAFADFPRKSVLQSTSKLRQCRRVAHRFEGKTRRHFALETDIQPDQEPDIGTKPVRSCYVGTNDPQVIMHLIRQAETLESGGLFRRAATVWMEAFRESHIPSERSAFLARRERCLRKSRKSVASGSEWYLSGNYVGS
complement(2126057..2126875)       PHAGE_Salmon_ST64B_NC_004313: putative replication protein; D6D39_10840; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
complement(2126872..2127096)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10845; phage(gi100121)     1.47e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
complement(2127093..2128250)       PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; D6D39_10850; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
complement(2128247..2128801)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10855; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
complement(2128830..2129054)       PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; D6D39_10860; phage(gi23505483)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
complement(2128993..2129178)       amino acid permease; D6D39_10865                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSDTVSYIHAFITLIFCALCKSTCASLLYEITCDIRKRRRFYAITIEKIAEIAWLYVTARR
2129152..2129847                   PHAGE_Salmon_ST64B_NC_004313: regulatory protein; D6D39_10870; phage(gi23505482)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2130053..2130391                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10875; phage(gi100115)     7.56e-78            SalmonellaentericasubspentericaserovarTyphimuriumMNNYYTCSFCGANEMDAKKIIAKGGNADPAICSECVVRCVGVLANTSTTESTRSTEMNNAASIEFWQLITALSEMAISSLKAAQEMGDEESACLIAKKLSVKFDYAPCRETV
complement(2130354..2130578)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10880; phage(gi100114)     1.54e-46            SalmonellaentericasubspentericaserovarTyphimuriumMPILETTLNSDSSNEGLAADVRALKIAVALLVTRIPLEHKPYAVCDALNNSGESSASELADLIKQFLDKAHNRT
2131118..2131489                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10885; phage(gi23505481)     4.75e-85            SalmonellaentericasubspentericaserovarTyphimuriumMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLLSIKGTTDGKLKAAQ
2131547..2132374                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10890; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGTMTTTSIEDFVRYSKGYASATEKARCFIDADHMTARSVFNIGTLDNPGHADNAASITLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGNTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDMLINKFDGESVETFIGNFKA
2132511..2133050                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10895; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
2133121..2133654                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10900; phage(gi100110)     1.88e-131           SalmonellaentericasubspentericaserovarTyphimuriumMTVHTLKQCRPDQEETEYLWKLFHAAQRNDARWHGSEISIIADELSRTDLDRNQKLFLLRSWQVLVDDKGGFGRFMGAFDTYVYNMQDPDDDCVAWKPELSNLLCDGQLLDVVIDAYQSARQRIAELEARTVNLSKRSVGEVMHMSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKGE
2133656..2133913                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_10905; phage(gi100109)     8.08e-58            SalmonellaentericasubspentericaserovarTyphimuriumMATLTKQEKAWVKKLNKLLAECPSNRIAFATTGDCEVSLFDVTRYDEIFDEVEKGKSEFIPSAMRIGATFNECLTFPNQVESTAG
2133924..2134505                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10910; phage(gi23505475)     1.75e-112           SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIELFIKSPLENGLTRGEQMELARIALASLEAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVSWTTIKAIWNKGVEHFRSSTATGDN
2134509..2135078                   PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; D6D39_10915; phage(gi23505474)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
2135103..2135345                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_10920; phage(gi23505473)     6.59e-55            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
2135347..2136336                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; D6D39_10925; phage(gi23505472)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2136450..2136539)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
2136497..2136511                   attR                                                                                 N/A                 CGGTTTTCGAGACCG
2136628..2137425                   DgsA anti-repressor MtfA; D6D39_10935                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2137524..2137601                   attL                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2137526..2137601                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2137797..2138087                   PROPHAGE_Escher_Sakai: putative integrase; D6D39_10945; phage(gi15834507)            3.32e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
2138494..2138571                   attR                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2138496..2138571                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2138735..2139208                   PHAGE_Escher_phiV10_NC_007804: putative protease; D6D39_10955; phage(gi89152430)     9.11e-53            SalmonellaentericasubspentericaserovarTyphimuriumMALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
2139205..2139387                   hypothetical protein; D6D39_10960                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTEAIPPGTCYHISAFYFTGCGLQRRPALLPRDRQSAPESAIFRARHSTGASLSSRKATK
2139299..2139695                   hypothetical protein; D6D39_10965                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumVTVNLRQNPRSFAPGTQPVRHFRRAKRQSDAQPLHRAMPLFSGFRRSFPNLTRLFGAAVSKKEEKKIDTEGGADAPENFCSRRQPVPRTVNSLYLNKLPLRRKGIVLAQPKSIRRRLFVFSKSQEKCMGKLG
2139683..2140150                   PROPHAGE_Salmon_LT2: integrase; D6D39_10970; phage(gi16766072)                       5.85e-46            SalmonellaentericasubspentericaserovarTyphimuriumMGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQ
2148411..2148422                   attR                                                                                 N/A                 TCACCAGGATAT

#### region 6 ####
complement(2382421..2383428)       PHAGE_Pseudo_H66_NC_042342: hypothetical protein; D6D39_12120; phage(gi100015)       2.60e-63            SalmonellaentericasubspentericaserovarTyphimuriumMSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK
2383608..2383835                   DUF1414 domain-containing protein; D6D39_12125                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPQLSRYSDEHVEQLLSELLSVLEKHKAPTDLSLMVLGNMVTNLINTSVAPAQRQAIANSFARALQSSISEDNAH
2383867..2385627                   cardiolipin transport protein PbgA; D6D39_12130                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWPTTLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKLRSLTRRRHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFEKQMPELATFAEQNIDFTRHMSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITALNQQGYQLGLFSSDGFASPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNRWFSWISFNGTNIDDSNQKNFVKRYASAASDVDAQINRVLNALREAGKFDNTVVIITAGRGIPLTPEENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTPANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQKPQLSLLLQVLTEEKRFIAN
2385701..2385777                   tRNA                                                                                 N/A                 CGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCA
complement(2385908..2386411)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; D6D39_12140; phage(gi100082)      1.50e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM
2386439..2386729                   PHAGE_Klebsi_phiKO2_NC_005857: Gp22; D6D39_12145; phage(gi46402108)                  3.33e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
complement(2386790..2386936)       PHAGE_Entero_HK140_NC_019710: hypothetical protein; D6D39_12150; phage(gi428781967)     1.65e-15            SalmonellaentericasubspentericaserovarTyphimuriumILLVIDTSVSPRDDSLLVCIDGEEFRIKRYRTHSQSHPVNFENGKRERL
2387077..2388906                   PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; D6D39_12155; phage(gi255252697)     3.17e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(2388960..2389403)       PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; D6D39_12160; phage(gi971758532)     2.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(2389781..2390308)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; D6D39_12165; phage(gi100034)     6.18e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
complement(2390311..2391552)       PHAGE_Salmon_ST64B_NC_004313: tail protein; D6D39_12170; phage(gi23505468)           4.38e-63            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
complement(2391539..2391682)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; D6D39_12175; phage(gi23505467)     3.76e-28            SalmonellaentericasubspentericaserovarTyphimuriumWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
complement(2391688..2392131)       PHAGE_Entero_SfV_NC_003444: capsid protease; D6D39_12180; phage(gi19548994)          1.43e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
complement(2392145..2392474)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); D6D39_12185; phage(gi23505495)     2.54e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
2392771..2394102                   NTPase; D6D39_12190                                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
complement(2394131..2394499)       PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; D6D39_12195; phage(gi148609434)     4.66e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(2394514..2395503)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; D6D39_12200; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(2395511..2395747)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_12205; phage(gi23505490)     8.21e-52            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2395832..2398198)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; D6D39_12210; phage(gi169257322)     2.16e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
complement(2398367..2398570)       phage tail protein; D6D39_12215                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
complement(2398867..2399658)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; D6D39_12220; phage(gi169257320)     3.48e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
2399961..2400164                   PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; D6D39_12225; phage(gi428782403)     2.21e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK

#### region 7 ####
2813750..2813776                   attL                                                                                 N/A                 CAACGCGCCTTCGGGCGCGTTTTTTGT
complement(2813878..2814681)       PHAGE_Bordet_BPP_1_NC_005357: adenine DNA methyltransferase; D6D39_14100; phage(gi41179391)     1.63e-78            SalmonellaentericasubspentericaserovarTyphimuriumMTVGIAIQHQPAHTPEHTKVYQTDNATLCRGNALEILPLIEPESIDALITDPPYSSGATHKAGRTNQGSHAKYLNGENLHRFDGFAGENMDARSWAYWTQLWMAQAHRAVRPGGYALVFTDWRQLPALTDAFQASGFTWRGIIAWNKGGSRTPHTGYFRHQCEYIVWGSKGHLDKSPSGPFDGCMTYPVIPSKKMHPTGKPEELMAELVRTVNSGGTVLDPFMGSGTTGVAALKAGRKFIGIETSDHYFEVAAQRLRGTITTTISAT
complement(2814626..2814823)       PHAGE_Escher_D108_NC_013594: Com; D6D39_14105; phage(gi281199699)                    5.03e-09            SalmonellaentericasubspentericaserovarTyphimuriumMTQNVRCKNCNKLLARASFHYIEIKCPRCKTLNQITRAIEHPTHMRSYDRGDRNPAPTSTYTGTH
complement(2815016..2815312)       PHAGE_Bacill_PM1_NC_020883: hypothetical protein; D6D39_14110; phage(gi472438254)     3.12e-23            SalmonellaentericasubspentericaserovarTyphimuriumMSEMVFCRGCGKEIHKDATSCPNCGAPQRTASSKSRMTAALLAFFLGGLGAHKFYLGKVGQGFLYLIFCWTFIPAIVAFIEFFIYLCTSDEDFARKYG
complement(2815448..2815588)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14115; phage(gi744692752)     6.37e-26            SalmonellaentericasubspentericaserovarTyphimuriumMSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ
2815594..2815782                   PHAGE_Stx2_II_NC_004914: hypothetical protein; D6D39_14120; phage(gi32171040)        6.67e-10            SalmonellaentericasubspentericaserovarTyphimuriumMLLFQGGANLSLAKVRRLGPRLNRNVFRGLSTSGLRVFPPTISRKAPARNLSLFCYSGNSAC
complement(2815779..2816039)       PHAGE_Yersin_L_413C_NC_004745: Ogr; D6D39_14125; phage(gi30065732)                   4.39e-09            SalmonellaentericasubspentericaserovarTyphimuriumMFRCPLCGASARIRTSRSENDSNTVRKKYYQCNNLECGISFSTLEAFHKFTSKHAPGVHSSEGIPWHELPASHRGNNQMSLPLSQN
complement(2816082..2817182)       PHAGE_Entero_P88_NC_026014: gene D protein; D6D39_14130; phage(gi744692751)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTDTTMQLLSQGTDPVKMPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWKGEPLTEKGTYIVDEIAHEGPPDRLTVSARSADFRDEFNVKREVSWHDVTVERVVSAIAHRYGLKPQISEMLMDIEIDHADQTEESDMSFLTRMAEMLGAITTVKSGNLLFIMPGGGVNAQGQPLPSFAITRSSGDRHQFRIADREAYTGVRAYWLDLNYGKKKKVSVKRRKPKKEKSSSREGDYMEGAEGNVFVLRKTYQNEQAARRAAAAKWQQLQRGAASFSITLARGRAELYPEMHGAVTGFKSEIDNQDWIIAKAEHTIDNSGFTTQLELEAKIPEWIAETE
2817340..2818524                   PHAGE_Entero_P88_NC_026014: tail sheath monomer; D6D39_14135; phage(gi744692749)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLVIGGSESDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVYASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAGKLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA
2818524..2819036                   PHAGE_Entero_P88_NC_026014: major tail tube protein; D6D39_14140; phage(gi744692748)     8.40e-121           SalmonellaentericasubspentericaserovarTyphimuriumMAVPKHLRFFTLFVDGENEVGKVTSVTLPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRELFLKYGGTIDGTLLRFAGEYYTDAESDLYEVEMRGRVTEIDMGEAKQGEATSHTYAIKNTYYKLSVNDRPLWEIDLLNFIYRKDGKDIVPDRIRSALGLG
2819092..2819466                   PHAGE_Entero_P88_NC_026014: tail protein; D6D39_14145; phage(gi744692747)            5.56e-53            SalmonellaentericasubspentericaserovarTyphimuriumMKDIDTETRNNTAADDVTAGEDMAVERGVKLTRPIERGGEKITYVEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA
2819475..2819630                   PHAGE_Entero_P88_NC_026014: tail fiber protein; D6D39_14150; phage(gi744692746)      6.69e-30            SalmonellaentericasubspentericaserovarTyphimuriumMCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVSWRERAALRSGNADNEDS
2819617..2822424                   PHAGE_Entero_P88_NC_026014: tail tape measure protein; D6D39_14155; phage(gi744692745)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNLERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLERLNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVTRARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRIDKNSPQFKALREQALKLGSETQFTASDAASGQSFLAMAGFTPQAIQAALPGVLNMALAGGVELGETADIGSNILTQFNLTADQMDRVGDTLTAAFTRTNTDLRALGETMKYTGPVAAKLGISLEEAAAMAGMLANNGLRGSDAGTAMRASLSRLASPPKAAADALKELGVSVADARGKMRPMEDVLLDLYKATQKYGQVDQVSFFKDIAGEEAFVGLQTLVAAAGSGELQKLTRELQGARGEADRVAKVMADNLDGDLKNLDSAWEGLRIRISDLVDGPLRSVTQWLTRVLEKITSLAQAHPVLTRQLLIAGGALLAMTATIGSLSLVIGVLYGKLATLRLGFDILTRSMNVVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFAGVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSAGEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQDKVALLQGDLAKINPPKPVENGNGTGGDKPKDNKPLTDSNTGTLRRLSKIADNTGKLVDETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPASAINITPVVPTPLPPALVPVVAASSRPVAEAIRSPVASVPATSRNREAVVSGFGGEIHVHLHNVVTQNPRELAKLVGEMVRAELERRDRAGRGSFYDKD
2822437..2822925                   PHAGE_Entero_P88_NC_026014: tail protein; D6D39_14160; phage(gi744692744)            9.07e-117           SalmonellaentericasubspentericaserovarTyphimuriumMMMIYGMFVFELRTLPHQQLQQNKNWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKGLF
complement(2822952..2823551)       PHAGE_Escher_pro483_NC_028943: DNA invertase; D6D39_14165; phage(gi971758535)        1.66e-106           SalmonellaentericasubspentericaserovarTyphimuriumMLIGYVRVSTNDQNTELQRNALECAGCELIFEDKISGTKSARPGLKKLLRTLSEGDTLVVWKLDRLGRSMKHLITLIEELREKGVNFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTLAGLAAARAQGRIGGRRPKLTKEQHEQIERLIKNGHDRKQLAIIYDIGISTIYRYHPVGDIQAEETTRQTQENENR
2823582..2823734                   PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; D6D39_14170; phage(gi526003631)     1.94e-05            SalmonellaentericasubspentericaserovarTyphimuriumMPVSRNLCIFLNVGLGETINLARNAVPATRRINSKPLTGDITLWASDVGAL
2823771..2824259                   PHAGE_Salmon_SJ46_NC_031129: RecA-like recombination protein; D6D39_14175; phage(gi100035)     3.33e-66            SalmonellaentericasubspentericaserovarTyphimuriumMGADNALGGNSIVLGDNDTGIKQNGDGVLDIYANSAHVLRFISILVESMVSLKVNGNAVATGEVQAGNGSSRMTNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDNQGENIDGINYAPLQKRVGNQWYTVQGGTT
2824229..2824846                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; D6D39_14180; phage(gi100034)     2.15e-118           SalmonellaentericasubspentericaserovarTyphimuriumMVYRTRGNDIMKKYQDIKNFRLIDAPVNRGKTQSEINIGAYFLESEDGQDWYECQSLFSDDTAKIMYDPEGVIWSVVNQPVPQRGNTYAVSMLWPVNMSVAEIDAADCPDDCRGDGSWLYRDGQVLPVPVDYQAKAETTRQKLLNDANNVIKDWRTELTLGIISDENKVTLINWMGYINKLKDIDFSQVNDEATFEKIKWPELPK
complement(2824851..2825309)       PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; D6D39_14185; phage(gi744692740)     1.80e-67            SalmonellaentericasubspentericaserovarTyphimuriumMVWLFDEDGKNWYEEQKKFSADSLKIAYDKNNVIVAINKDVSAINPDGCSVVELPDITANRRADVSGRWMFNGEQVSKRVYSPEELRQQAEAKKQKLLEEAEVVIKPLSRAVKMGIATDEERKRLEAWELYSVLVSRVDSSDPDWPEKPASQ
complement(2825388..2827256)       PHAGE_Escher_pro147_NC_028896: tail fibers protein; D6D39_14190; phage(gi971753729)     3.88e-174           SalmonellaentericasubspentericaserovarTyphimuriumMTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIPENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDKISEHEQSRRHQDASLTAKGFTQLSSAINSESETLAATPKAVKAAYDLANGKYTAQNATTIQKGIVQLSSATNSTSETLAATPKAVKAVMDETNKKAPLNSPALTGTPTTPTAPQGTNSTQIASTAFVMAAIAALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDATLTALAELATSADKLPYFTGADRAALTALTSVGRAILGKPSTQGVLDYLGLGETINLARNAVPATRRINSKPLTGDITLWASDVGALPIAGGRLNGALGIGADNALGGNSIVLGDNDTGFKQDGDGVLGIYANNARIGYIDNSGLHMSVNVLTNGGIRVGDGKQFSLTSNNNSTMTATFNLWGGADRPTVIELDDDQGWQFYSQRNTDGSISFRVNGQMEPNSYSNFDSRYVQDIRLGSLQYGQVWNGPGFSDTSGYVITGITNGNSDELVDGAHRRPIQKLIGNQWYNVVSI
complement(2827253..2827861)       PHAGE_Entero_P88_NC_026014: tail protein; D6D39_14195; phage(gi744692738)            2.58e-92            SalmonellaentericasubspentericaserovarTyphimuriumMSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHLLPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAVEPLGYLIEVKEWWQLNEEPGTFRIVVGVLDQGITDEMYQELERLIADAKPVSRHLTGLAISLSVNGKIFVGTGCYHGDALTVYPYTPESIIVEGDYFPAPAIHLIDNLRVNA
complement(2827854..2828750)       PHAGE_Entero_P88_NC_026014: baseplate assembly protein J; D6D39_14200; phage(gi744692737)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHGSGTNLDNLAGNMNTKRLVITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPSPACVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSASIVTWRLNAKLYFYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE
complement(2828754..2829104)       PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; D6D39_14205; phage(gi744692736)     1.65e-80            SalmonellaentericasubspentericaserovarTyphimuriumMTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE
complement(2829101..2829682)       PHAGE_Entero_P88_NC_026014: baseplate assembly protein V; D6D39_14210; phage(gi744692735)     8.48e-134           SalmonellaentericasubspentericaserovarTyphimuriumMSAELMRLLSNIIRTGIISEVDEESWCVRVRSGELETGWLRWNTTRAGAFNVWLPPSPGEQVAIACIGGNPETAMIIGSLWSDANPAPGKSLKEIVISAPDGAVFRYDADAGALSASGMKTATLQASVSVKLDTPVVECTNLLRTATLDVTKGGKMSGNITHSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ
complement(2829679..2830314)       PHAGE_Entero_P88_NC_026014: tail protein; D6D39_14215; phage(gi744692734)            4.72e-152           SalmonellaentericasubspentericaserovarTyphimuriumMDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRRVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNNIRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAARIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR
complement(2830307..2830774)       PHAGE_Entero_P88_NC_026014: tail completion protein; D6D39_14220; phage(gi744692733)     4.67e-113           SalmonellaentericasubspentericaserovarTyphimuriumMLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQGTPQAEHLPEPKPRLPSSEGDWSHVFQDVTWGESDG
complement(2830912..2831319)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14225; phage(gi744692732)     9.11e-90            SalmonellaentericasubspentericaserovarTyphimuriumMKLWPTLGVAFLLIAAWGTSMRLSWSLGRENARNEAQASALKSTVDTLNIISTGVQDMQQVLAQLRVENQQRNQDGEARREQLRNDIAKDECAHALPDARFTDRLRRHAERATASAVSPAYTADADHTSNASPLP
complement(2831316..2831708)       PHAGE_Entero_P88_NC_026014: endolysin; D6D39_14230; phage(gi744692731)               5.63e-94            SalmonellaentericasubspentericaserovarTyphimuriumMSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLRSRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQVSWEWPLYEKIAAAFRQASRELNIPVEWGGDWKTLKDGPHFQLPHGAYPA
complement(2831705..2832028)       PHAGE_Entero_P88_NC_026014: holin; D6D39_14235; phage(gi744692730)                   3.26e-72            SalmonellaentericasubspentericaserovarTyphimuriumMSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTLVQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRVKEKDE
complement(2832031..2832231)       PHAGE_Entero_P88_NC_026014: tail component protein; D6D39_14240; phage(gi744692729)     6.35e-43            SalmonellaentericasubspentericaserovarTyphimuriumMKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDAGQEVEMPEPEKKKREMIQLWGE
complement(2832231..2832725)       PHAGE_Entero_P88_NC_026014: head completion-stabilization protein; D6D39_14245; phage(gi744692728)     7.53e-115           SalmonellaentericasubspentericaserovarTyphimuriumMSMVARTNPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIFAELC
complement(2832827..2833627)       PHAGE_Entero_P88_NC_026014: terminase endonuclease subunit; D6D39_14250; phage(gi744692727)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQARLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLALRIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREIVTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLSRALKKADSAAAPEDASTPQAQDESSKSKKTTRKPATRKTTATQKAKRG
complement(2833673..2834725)       PHAGE_Entero_P88_NC_026014: major capsid protein; D6D39_14255; phage(gi744692726)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPSVQQRFENAVKESTEFTKKINVFGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLKNRKYQCEQVNYDTFISYPQLDAWAAHPDFQSRVSTQIARQVALDRIMIGFNGTSHADESNFSTNKLLQDVNVGWLGHIRTNASERVMNDVTLTSRNMDNTVAHAGKYANADALVQDARSSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRAIGGLDVFLAPFFPDSTMLITSFNNLSIYWQKGTMRRLMKDEPEYNRIATYQSINDAYVVEDYGKCAMVTGLKFADS
complement(2834748..2835584)       PHAGE_Entero_P88_NC_026014: capsid scaffolding protein; D6D39_14260; phage(gi744692725)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANEKKTSRKKFRVAVSGSTVDGREISPVHLREAAENFNPDVYAARVNVEHYLSPCPSSEFSAMGDVTALSTEDITEGPLAGRTALYAEIEPTERMKQLVADGKKIYSSIELHPQFSVNGRAYLVGLAMTDTPASLGTERLKFTAQQRQAVMTFNSIQGEAPLISEAIESEIIEMAEQRQEEGTQWFNRVMGIIGRGRKADDASFSRIQEAVEGVATSQADIIDRFNVLETRHQQDRQKITSLTTELAALKEKLRTQDGDPQNRFTATGAASDQLADF
2835739..2837490                   PHAGE_Entero_P88_NC_026014: terminase ATPase subunit; D6D39_14265; phage(gi744692724)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQWDETPPVQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKGRAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGATWYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKIILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFSTPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVVNHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKPFAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPAVPGGRFRTVETRRVQGLEFEEQARVIEEFTYRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQIMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVINEPIGGEGENERFTVMEF
2837515..2838534                   PHAGE_Entero_P88_NC_026014: PBSX family portal protein; D6D39_14270; phage(gi744692723)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSSRIDLADALRKESSLSAFTFDGPYRLTGHDLLDNMYCADNGRWYETPVDWYGLARAARQTSWHQSALYFKRNVLLGCYIPHPLLSRQDFSALALDWFVFGNAFLELRSNMLGEPLKLRHALAKYMRRGSDLESWWYVQDGKDAFQFRPGKVCHLMNPDINQEIYGMPEYLGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGAAQVNRESMDSLKETLQGARGGGAFKNVLIHAPNGGKEGVQILPFQQITAKDEFMNVKAASRDDVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVIRFNPYALLDTQPTS
complement(2839038..2839562)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; D6D39_14275; phage(gi23505476)     9.93e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSKIDYQALRERYSPAPVPKCPICGEEMSIQRISGAQVVYACSGYGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYALKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIKAGGKALWQEKHDDR
complement(2839559..2840083)       hypothetical protein; D6D39_14280                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKKYEYMLMKEALRAGLAPCPVSVEAVVGNTIFRTLRNRVSVKMIHQPPKSTSMIYLPLPEAIKLMRSLKFAIWMQTQLNKAVQNTFVKKLMPELAARCAKCTRPALQFDLSLIQQATEAELYRLSPLHDVHTEASEMFRLMFQFNFAVRRTRVQVNRMMQAQEELTQHKGGNQ
complement(2840147..2840482)       PHAGE_Entero_P88_NC_026014: carboxylate-amine ligase; D6D39_14285; phage(gi744692719)     2.16e-66            SalmonellaentericasubspentericaserovarTyphimuriumMQHIDREKAQRLIERMEALAKEENVNIQKIAECGQIVLRREKDIKQLMSGEISKTWTSGKKTIYCSFCNKSQHEVIKVIAGPSVYICNECVDLCNEIIRGEVTDHEEKTHE
complement(2840546..2840857)       PHAGE_Entero_P88_NC_026014: chromosome partitioning protein; D6D39_14290; phage(gi744692718)     1.75e-66            SalmonellaentericasubspentericaserovarTyphimuriumMTTPTRRISFYLKPAAVKNEGEACAWLDSLTPEARKSGQRVAFLAGLALLKMNPAEAYRLAAWADDEALSVTQTRTERPASQPVSTAQITSQMARNIRALFPE
complement(2840862..2841821)       PHAGE_Entero_P88_NC_026014: recombinase; D6D39_14295; phage(gi744692717)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKICIDDGSTNIKLAWTENGERRNAISPNSFKSEWSAPFGGSQPANYMLDGVRYGFDPVSDRFVQTTDTQYQYSDVNVIAIHHALVKSGITPQEVDVVVTLPLSEYFDTNAQPDMANINRKKANVMRPVEYQNGEAFTIRNVRVMPESIPAGFKALADMSPFESLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIANTIIEHRHNEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAGFSGYGRVMVVGGGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE
complement(2841887..2844739)       PHAGE_Entero_P88_NC_026014: replication protein; D6D39_14300; phage(gi744692716)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSAFAWSWNEPRPAIDPARFTERRQETETDLQRAIRYYLEADKRAQKEQEAKEEAFFAQSAMGKKLMASLEEAGQREKLAQSIISKRRATEQDPVARAFATLKALPVYLREPLSRHLSFLRKKQEADRQKGKKSWQAERYARGTLRKIFERLDRTDSRWLTPGYRSLAGRERLDDLLYLPQLNKHQIQTLATMTAAMFSSTFEKLCDGFDATDGELTMDVTLKAYQMLARMALHLHAMPPHYDALTTDKDRRNEPDTELLPGAILRLTCAEWWKRKLWLLRCEWREEQLRAACLVSRKTSPYLSQDALSEFRAQREKTRDFLKSFILENEDGFTIDLETVYYAGVSNPVHRKAEMMATMKGLELLAEARGDKAVFLTVTCPSKYHATTENGHPNPKWNGATMRDSSDYLVNTFFAAVRKKLNRDGLRWYGIRTVEPHHDGTVHWHMMVFAHPEEIDSIVAITRDIAIQEDRHELGNDITPRFKVEYVDGSKGTPTSYIATYIGKNLDSRAVDGIDPKTGKPRVDHETGKSMAESVERAIGWARLHRVRQFQFFGIPSRQVWRELRRLASQMARNPEGPQRLKDDAMDAVLAAADAGCFATYIEKQGGVLVPRKDYLIRTAYDLADELNDYGEQSVQIYGIWSPLIGESSRVCTHPDNWKLVRRKPEAEDSTHENGFDLQGGPAAPWTRGNNCPRVQETDNNGTEQPEERPAPWPQIPDGVEVNEWLHSLKRHERRALMRSLRDKQAKNNSDEMQSWTQSRKQQRPLPDNHELLAKEWRESAESLGLHIGEQQMQHLLRGGSLYVDGSIIAPQGFEIVRKPDTRPDSRITQLWQRLSRNHDVSSTEIRHNPVASYLAQLGASDPEAAARLASTLQQDQNTMKTPVTVLSDMLRAIRDAEHAQRISETTERARRKADLLRGGLTSGNKKQTETGFTNPINEQKNAPRYMKRA
complement(2844736..2845125)       inositol monophosphatase; D6D39_14305                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIDAHDFTRWVRTQDTRLAPVLQGLFDLYIRGRDNRARTTKPENADTLYFTVDDCYRVDVTPHGLALHCLTPHGESLLAYYDSPASVFAAMLAHRTAGGCASLSEYTAEFNRLSALFSQEWQRVTGYQP
complement(2845198..2845428)       PHAGE_Entero_P88_NC_026014: derepression protein; D6D39_14310; phage(gi744692714)     2.29e-45            SalmonellaentericasubspentericaserovarTyphimuriumMADRKQHRAIAERRHIQTEINRRLSRASRVAQIMHINMLHERSHALSNIYSASVFSYLADDLHELQQLIQQQNKLH
complement(2845751..2846050)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14315; phage(gi744692710)     3.27e-57            SalmonellaentericasubspentericaserovarTyphimuriumMSTINHQKLRELAFALQRMATPQKLLAFRAMLSPSAVLALLDQLEHARTTAPAIRLTLHHEIADFCATLGAPGEPETPEAMQQELLQRIDKVFDFFLNQ
complement(2846047..2846313)       PHAGE_Entero_P88_NC_026014: MarR family transcriptional regulator; D6D39_14320; phage(gi744692709)     1.74e-41            SalmonellaentericasubspentericaserovarTyphimuriumMTILDYIATHPGCSGGEIAAALNTPTTAINAELRQLWRGGLVIRTNRSTGGRARKTGGQASYHVNPMPFGCSNPLTHMFNQLLKEART
complement(2846310..2846513)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14325; phage(gi744692708)     2.04e-35            SalmonellaentericasubspentericaserovarTyphimuriumMAIKHFSVVRFTSRGREYEVDERLITTIDKHRSEKDAHHIYLTDGTYFCATNVARVNLIRQVQEPRR
complement(2846537..2846953)       hypothetical protein; D6D39_14330                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNTKEEGIINTLKKISEAEDEMAKDAVKRSQHMAALHALTIAKITADAAKIIEEQSKEIDTLKTQSTVAAMNPSSIGRCIYILGSAMMPQYTIIAELHGKYLITPYHTKESELLTNLRLIERSQAVFIDDAQRAVFNA
complement(2847046..2847159)       PHAGE_Entero_P88_NC_026014: membrane protein; D6D39_14335; phage(gi744692707)        2.26e-17            SalmonellaentericasubspentericaserovarTyphimuriumMSIFISWLVLIISVACAIGIMRIIHSVKKIERFFTDE
complement(2847156..2847398)       PHAGE_Entero_P88_NC_026014: DNA modification methyltransferase; D6D39_14340; phage(gi744692706)     4.25e-52            SalmonellaentericasubspentericaserovarTyphimuriumMGKEYKTLINKALERFYFRLSASGAHAERAARDSLTRAIRSLYDVAFYADDLDALNELSELICAAECGEHIEPYKLGNIA
complement(2847410..2847688)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14345; phage(gi744692705)     1.94e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTKEHAQGVFIRFIDFRGELLLRASAIDGVVPSEKNAATYVYLNGTRLTVELPYQTVREIISEAEKARQVNGDEPYIEIICMDSEAEIQKAD
complement(2847699..2848040)       PHAGE_Entero_P88_NC_026014: hypothetical protein; D6D39_14350; phage(gi744692704)     9.53e-75            SalmonellaentericasubspentericaserovarTyphimuriumMKQQRNSRFRNGAERHANRFATSASRSNIRYSLSDTHATPDGYPVKQIGEHAWLIEKAGIVVHKCPRNPFTGNRIFALSCGDNQFGQDFTLYEALRTVDRLLRGQSFIKQADL
complement(2848059..2848385)       hypothetical protein; D6D39_14355                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNEELLRALFKIPDPITVDEFSRRTGKTESAVRKLVERRLIPLTTEREVLGEEGSSRRLLILWNEWLEMVYDATKQLPPERKDWRNHWLKKAKKLAEDLGLGFLNFAA
2848481..2848783                   PHAGE_Entero_P2_NC_001895: gpC; D6D39_14360; phage(gi9630358)                        3.04e-27            SalmonellaentericasubspentericaserovarTyphimuriumMRMTIGERIKIMRESERLTSLPDTAKMLGLNRDALWRYESGKTIPNAEVIEQILNNPRFEKYALWFMTGKIAPESGQIAPALAHYGQEPTDLPPSERKIG
2848850..2849839                   PHAGE_Entero_P2_NC_001895: integrase; D6D39_14365; phage(gi9630357)                  6.04e-129           SalmonellaentericasubspentericaserovarTyphimuriumMAIKALDGGRYKVDVRPRGRSGRRIQRIFKKKADAVAFERYVLSHMHDKEWLEKPTEQRHLSDLLPLWWELGGRNKPYANGVLTRLKKIIKEMNDPRVSQINARFMAAYRSSRLSLGVKESTVRRDESDLGGMFTLLANAGEFHGENPLRALPSLKRKSPEMTYLTTEEIAKLLDAVSGDARRITLLCLSTGARWGEAKNLRAEHIINNRVTFNKTKNGKVRIIPVSDEVVSEIKTKKSGLLFDVNYEEYRKVLRSVKPDLPKGQAVHVLRHTFAAHFMINGGNILTLQRIMGHATIQQTMTYAHLAPDFLQDAISLNPLKGGIHISST
2849926..2849952                   attR                                                                                 N/A                 CAACGCGCCTTCGGGCGCGTTTTTTGT

#### region 8 ####
complement(4424265..4424993)       PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; D6D39_21945; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4425190..4425480)       hypothetical protein; D6D39_21950                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
complement(4425729..4426184)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; D6D39_21955; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4426181..4426786)       DUF4376 domain-containing protein; D6D39_21960                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(4426791..4428536)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; D6D39_21965; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(4428539..4429171)       PHAGE_Burkho_BcepMu_NC_005882: gp51; D6D39_21970; phage(gi48696961)                  5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4429164..4430279)       PHAGE_Burkho_BcepMu_NC_005882: gp50; D6D39_21975; phage(gi48696960)                  2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4430270..4430629)       PHAGE_Burkho_BcepMu_NC_005882: gp49; D6D39_21980; phage(gi48696959)                  3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
complement(4430793..4432340)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; D6D39_21985; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4432340..4433269)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; D6D39_21990; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4433266..4433628)       PHAGE_Entero_SfV_NC_003444: putative flippase; D6D39_21995; phage(gi19549013)        2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4433956..4434678)       PHAGE_Burkho_BcepMu_NC_005882: gp48; D6D39_22000; phage(gi48696958)                  3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4434688..4435731)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; D6D39_22005; phage(gi48696957)          2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4435719..4435928)       PHAGE_Burkho_BcepMu_NC_005882: gp46; D6D39_22010; phage(gi48696956)                  6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(4435928..4436881)       PHAGE_Burkho_BcepMu_NC_005882: gp45; D6D39_22015; phage(gi48696955)                  5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4436881..4439235)       PHAGE_Burkho_BcepMu_NC_005882: gp44; D6D39_22020; phage(gi48696954)                  2.03e-60            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDIFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4439332..4439460)       GpE family phage tail protein; D6D39_22025                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4439420..4439737)       PHAGE_Burkho_BcepMu_NC_005882: gp41; D6D39_22030; phage(gi48696951)                  1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(4439789..4440313)       PHAGE_Burkho_BcepMu_NC_005882: gp40; D6D39_22035; phage(gi48696950)                  6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4440313..4441740)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; D6D39_22040; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4441730..4441927)       PHAGE_Burkho_BcepMu_NC_005882: gp38; D6D39_22045; phage(gi48696948)                  2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4441924..4442379)       PHAGE_Burkho_BcepMu_NC_005882: gp37; D6D39_22050; phage(gi48696947)                  3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4442539..4442853)       PHAGE_Burkho_BcepMu_NC_005882: gp25; D6D39_22055; phage(gi48696935)                  1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(4442866..4443471)       PHAGE_Pseudo_B3_NC_006548: endolysin; D6D39_22060; phage(gi56692593)                 4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(4443474..4443761)       PHAGE_Burkho_BcepMu_NC_005882: gp21; D6D39_22065; phage(gi48696931)                  3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4444337..4444684                   PHAGE_Burkho_BcepMu_NC_005882: gp01; D6D39_22070; phage(gi48696911)                  2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
