gi|00000000|ref|CP036200.1|  Shewanella sp. D4-2 chromosome, complete genome. 4718011, gc%: 44.54%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(46117..47184)           PHAGE_Entero_I2_2_NC_001332: replication initiation protein; EXU30_00330; phage(gi9625383)     6.99e-106           ShewanellaspD42MIDWATVEIALEHEPIASDRFIKVKADGEIEYETVCRNRIQAGSYESSISIRSLGSNGQGKATHLQIDGNPSKFTQGHNVFGINHLLPLVSRTFKVITGYLQIDYTDQEFWAVQRGHYRITRIDINESFELDNLLSVRSWLKAAELKSKTRHGRPTSKGGTVYWGQNSRRWAIKAYCKYDEINSGKKHQLPDELKNTKIPKWAESKLRIELVLRGMELAKLEIKQGADLTPERIEELYNAYLGRLEMSKNVTLTDSSALNLPRKLQSTYMLWTQGHDLKTLLPRTTFYRQRKELLEHDIDINMSCDQPNQTNVVPLLKVLEAKPVSTPAWAFNEGLVLDPTSDKTHVGYVLKKVS
complement(47721..48089)           hypothetical protein; EXU30_00335                                                    N/A                 ShewanellaspD42MSNHGGVRKGAGRPKGSKVAEPTKGVRVPLGAEHAVKSLIKCYKQHNEASLRNLTSMAETAALELGQDSAFLLAFALTNQRAAINSVTLIDNFKTANAHLLSPTDELIDSMEDNEDWVGFDD
complement(48082..48303)           hypothetical protein; EXU30_00340                                                    N/A                 ShewanellaspD42MAKQSDLNFVENTKSCVFCSFKDIEFFWEKGTDTVIVSGFYSDISLRYRCDREISATDARKAIVKFVGDTFHV
complement(48657..48839)           hypothetical protein; EXU30_00345                                                    N/A                 ShewanellaspD42MRTETRTSSVKRPGKQPDLQCDNCGKPSWYDEYDSLFITCNHCNGHLRKVTDEEPLVHLR
complement(48809..49012)           hypothetical protein; EXU30_00350                                                    N/A                 ShewanellaspD42MNEHLSKAMKLHRDIVMINEFLLKRLAPEQAQAELNAKVAVLLGELDDELSYMEEEVSCELKHVQAA
complement(49025..49330)           PHAGE_Entero_Ike_NC_002014: G V protein; EXU30_00355; phage(gi9626235)               3.74e-09            ShewanellaspD42MLTIEVFQEDVNVTSRKLPPKDGNEGRVFYEQTAYAHLGDKFPVKMTLQVDGPAAVYPAGKYEISEKSFVINNFGGLELKRFGLVINKLDKQTSSAPVISK
complement(49342..50484)           PHAGE_Entero_If1_NC_001954: hypothetical protein; EXU30_00360; phage(gi9630757)      1.54e-56            ShewanellaspD42MFFIDRLFMQQDHLDANLPLVGKHVIERVELETGEHLPPSVNQKILEGSYSTKLTIRCDGQRVRVEGNPSRWQRMDNLFGLQTLDECVAIFNCVLARHNLPPFTKNTRVGFRKSTRTEKLELFGNGAEITSIDWTVNHEVGKGRERSFIRGLSSMQIGRGRKPKLYPNGHSCYWGEGSEWAVTKLYNKAFELETHLRKDQRKKHNVSSGQLTYIEKLIDYCEELGVVREEHVLRQKLLKRHNLHLYGRVTESDFYPHLKDIETAMNTIQISHDEHQSIAHQLLAAGAVKTLRQANTTMNYFTLWQHGSDLREMLSESQFYEHKSRLKAIGIDIGQQFDVSRMCPTLKRSDPIEIKPLSVPDWYQMPVVEQSNVLPFKAYA
50624..50989                       PHAGE_Entero_mEp235_NC_019708: prophage repressor; EXU30_00365; phage(gi428781850)     7.02e-07            ShewanellaspD42MSIGSVLKDKRLALGIKQEDIAEQLGVTVQTVSKWERDVTEPKASQVFSLSKILRLSEKSICKGETSSVSDNPMDFMMKFGKVIHHLNDTALMVTLYDHIEDEESFYEDLVKQSDLPKEAF
51068..51571                       hypothetical protein; EXU30_00370                                                    N/A                 ShewanellaspD42MDSAIYTLIGVAIGAAAGLAGSIITSKNTYKIETAKMKANHRAEIIKDVQITAHDYFTSIKLLLLEIYTGVENKTLVDEAGEPSLVTLEDKVKSIEDYQVVMHRKVSQLKSIGLKELAAKASKCVEPMESFVSKPDFTKIMNTIATINTLEDEFIDSIANEYIKLKL
complement(52380..52562)           hypothetical protein; EXU30_00375                                                    N/A                 ShewanellaspD42MQIETRTSSVKRAGKQPDLQCDNCGKPSWYDDYDSLFITCNHCNGHLRKVTDEEPFVHLR
complement(52532..52789)           hypothetical protein; EXU30_00380                                                    N/A                 ShewanellaspD42MATQGTVVLSDFESVYQSLKQLKLAAQAVSDVADDWCEEDAKHALVTLLSSNLQQQLEQHQQVVLKSINVVESEPVCKSKHVQAA
complement(52801..53106)           PHAGE_Entero_Ike_NC_002014: G V protein; EXU30_00385; phage(gi9626235)               3.74e-09            ShewanellaspD42MLTIEVFQEDVNVTSRKLPPKDGNEGRVFYEQTAYAHLGDKFPVKMTLQVDGPAAVYPAGKYEISEKSFVINNFGGLELKRFGLVINKLDKQTSSAPVISK
complement(53118..54260)           PHAGE_Entero_If1_NC_001954: hypothetical protein; EXU30_00390; phage(gi9630757)      1.54e-56            ShewanellaspD42MFFIDRLFMQQDHLDANLPLVGKHVIERVELETGEHLPPSVNQKILEGSYSTKLTIRCDGQRVRVEGNPSRWQRMDNLFGLQTLDECVAIFNCVLARHNLPPFTKNTRVGFRKSTRTEKLELFGNGAEITSIDWTVNHEVGKGRERSFIRGLSSMQIGRGRKPKLYPNGHSCYWGEGSEWAVTKLYNKAFELETHLRKDQRKKHNVSSGQLTYIEKLIDYCEELGVVREEHVLRQKLLKRHNLHLYGRVTESDFYPHLKDIETAMNTIQISHDEHQSIAHQLLAAGAVKTLRQANTTMNYFTLWQHGSDLREMLSESQFYEHKSRLKAIGIDIGQQFDVSRMCPTLKRSDPIEIKPLSVPDWYQMPVVEQSNVLPFKAYA

#### region 2 ####
815974..817320                     PHAGE_Cyanop_KBS_S_2A_NC_020854: hypothetical protein; EXU30_03470; phage(gi472341459)     8.36e-05            ShewanellaspD42MNTLVKTSLAAALAVVANNAIADQVFNDDLIVTSSACIGQDCVNGESFGFDTIRLKENNLRIKFQDTSNSASFPSNDWQLTANDSSNGGLNKFSIDDIDGGKTPFTIEAGAQSHAIYVDDGGRVGLGTSTPVVELQVVDGDSPTLRLEQDGSSGFTAQTWDIAGNETNFFVRDVTNGSKLPFKIKPNAPTNSLFVDSNGDIGLGTQSPKADLHVLTDNTNSFLVGANETDYNLIVKNDGVTHLQSDYIDTDSTSCGGLDCGRFTAIATIEENNSATTGRTLLALKNNAPGWISMEDTTQNNKWILSNGGGSFSVVLLDQNTNTMSVPFKIANNGDVTVSGVVNESSSKLLKENISEVDYNDILSSIDKLAISSWSYIKDKGSVKHIGPMAQDFFNAFNLGASDKHLSSVDTSGVSLAAVKALYKISQEKDKKIEELESRLAKLEAAKR
complement(817411..818370)         PHAGE_Prochl_P_SSM2_NC_006883: nucleotide-sugar epimerase; EXU30_03475; phage(gi61806129)     9.32e-116           ShewanellaspD42MRKVFVAGHRGMVGSAIVRKLQERDDVEIITKTRTELDLTNQQAVADFFESERIEQVYLAAAKVGGIHANNTYPAEFIYENLMIESNIINSAYQNGVTKLLFLGSSCIYPKLALQPMQESALLSGTLEETNEPYAIAKIAGIKLCESYNRQYGVDYRSVMPTNLYGPHDNFHPDNSHVIPALLRRFHEATERGDAQVVAWGSGKPMREFLHVDDMAAASIHVMELDKETYDKNTEPMLSHINVGTGVDCTIRELTETVARVVGFEGEIVWDTTKPDGAPRKLMNVDRLATLGWKYSYSLEKGLEDAYQWFLANQDNFRE
complement(818393..819436)         hypothetical protein; EXU30_03480                                                    N/A                 ShewanellaspD42MKNTEVGSVTSERDGSGPKSWAENHWHKVNASEYPKTKEVFSDVKRCIEQHIKTGHCPVTPLLNSNGNVITIGSCFAAELRHFLTSAGLSSNSFWIPSGLNNTFALRDFISWVVTGVETSEGYRYERNEDGVVNDWKPEHERSFYLEHFKSASAFVFTIGLAEIWEDRVTNKVFWRGIPSSIFEEGRHYFRLSSVSENTENINAIIALLRQVNCAAPVVLTLSPVPLKASFKGESCVTADCVSKSTLRVALNEVLAGSPENTYYWPSFEIIKWLGCHLPFPVYGTDDGVVRHVSRFMVLQILKAFTDTYYGESIGKDTFESFDSSLEEIEGNAGEPPIIYKGTLVSA
complement(819499..820614)         PHAGE_Synech_S_SKS1_NC_020851: GDP-D-mannose 4,6-dehydratase; EXU30_03485; phage(gi472340900)     4.22e-168           ShewanellaspD42MKKALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASLFNTARVDHIYQDLHEDNPKFILHYGDLTDSSNLTRILKEVQPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRFLGLEKKTKFYQASTSELYGEVQEIPQTETTPFHPRSPYAVAKMYAYWIVVNYRESYGMHACNGILFNHESPRRGETFVTRKITRGIANIAQGLENCLFLGNMDALRDWGHAKDYVRMQWMMLQQDEAEDFVIATGKQISVREFVKMSAAEAGIELEFSGEGVNEIATVVGVSGEDAPGVKVGDVVVRVDPRYFRPAEVETLLGNPAKAKVRLGWEPEITVEEMCAEMVRYDLGQAKQHALLEKHGFDVAVAKE
complement(820650..821816)         PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; EXU30_03490; phage(gi100146)     6.05e-40            ShewanellaspD42MKIAVVGTGYVGLSNAMLLAQHNEVVALDIDEHKVSQLNKAISPIEDEYVTEFLEDKKLNFSATLDKEAAYLNADIVIVATPTDYDPETNYFNTSSIEGVINDVNFYNPNALIVIKSTVPVGYTLKIKKELGVDNVMFSPEFLREGKALFDNLYPSRIIVGEQSARAEQFANLLIQGGRKKDVPVLYTNPTEAEAVKLFSNTYLALRVAYFNELDTYAQTHELNTAQIITGVGLDPRIGEHYNNPSFGFGGYCLPKDTKQLRANYEDVPNNIIGAIVDANSTRKDFIADSILSLNPKRVGIYRLIMKAGSDNYRASSIQGVMKRLKAKGIEVVVYEPVFEGSEFFHSEVVHNLHEFKNMCDVIVSNRMSKDLADVSDKVYTRDLFGND
complement(821846..823222)         PHAGE_Synech_S_SM2_NC_015279: hypothetical protein; EXU30_03495; phage(gi326781950)     2.25e-06            ShewanellaspD42MNFMKSEWIAKSEVLLKLARENKLDNDTSSAEKNYLEALKYDYYSKNLREEIGEFYKSLSREVEAERVMHTPYVPLDIKTYKMSSQEEYHMSKHLVDKLDGLGLSPLYVDECSRSYTMRCPDGYDLLSESLQQHDVFQCIGTEQLLSKSTVRCYGNACFTPNGAFTVDDYYFKENRVTSGSFLRYVFFHPLLGFISDKTQKPDKVECDLGFVFQRHPMLNYYHLMVEQAPALLNYKRYLEPKGVKLIILRNNYEGLIKQILSLLSISESSVVWESARYIQCEYTYKQDAATNNCNQVVKFVTNSTVEFFDYLSLQHSVPFRVKKKRIFISREDSPKRTMKNEKQVFELLETFGFEKVILTGMSLTDQIRLFASSEAVVGAHGAGLTNIGFCCPGTFVLELTRTFTLGRLRIFWDLAIIKKLKYSVVCAEDSVNDHAAPFEAPVDKISELLSNVFVKNK
complement(823243..824187)         PHAGE_Prochl_P_TIM68_NC_028955: putative NAD-dependent epimerase; EXU30_03500; phage(gi971760350)     2.68e-30            ShewanellaspD42MNIKKKVLVTGGAGFLGSHLCDKLIQMGCEVLCVDNYFTGRRDNISHLLDNPNFELLRHDVTFPLYVEVDEIYNLACPASPVHYQFDPVQTTKVNVLGAINMLGLAKRTKAKIFQASTSEVYGNPSVHPQPESYHGDVNPIGIRSCYDEGKRCAETLFFDYYRQHKLDIKVVRIFNTYGPRMHPNDGRVVSNFIMQALAGEDITIYGDGSQTRSFCFVDDLINAFILMMDSASDVTGPINVGNPTEFTMKELAECVIRLTGSSSKITYQPLPQDDPLQRKPDIVLAKEKLGWTPTIELEQGLTKTIEYFKQYIR

#### region 3 ####
complement(1050291..1051304)       PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; EXU30_04445; phage(gi16130960)     0.0                 ShewanellaspD42MRVIGIETSCDETGIAVYDDEQGLLSHMLYSQVKLHADYGGVVPELASRDHVRKIVPLIKQALKDANSTLDDIDGVAYTKGPGLIGALLVGACVGRSLAYSWGKPAVGVHHMEGHLLAPMLEDDAPEFPFIALLVSGGHTMLVDVKGIGQYEVLGESVDDAAGEAFDKTAKLMGLDYPGGPRLAKLAAQGEPNCYKFPRPMTDRPGLDFSFSGLKTFTANTINAEPDDEQTRANIARAFEEAVVDTLAIKCKRALKQTGYKRLVIAGGVSANTRLRESLAEMMSNIGGKVFYPRGEFCTDNGAMIAYAGLQRLKAEQTEDLAVKGQPRWPLDSLPPV
1051670..1051885                   PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; EXU30_04450; phage(gi460042545)     1.86e-05            ShewanellaspD42MPIIKVRENEPFDVALRRFKRSCEKAGILADVRAREFYEKPTTARKRAKAAAVKRLAKKLSRENARRVRLY
1051895..1052338                   PHAGE_Bacill_G_NC_023719: gp509; EXU30_04455; phage(gi593777964)                     5.07e-16            ShewanellaspD42MSLVDQLKDQMKVAMRAKEKVRLGTIRMALAAIKQVEVDTREALTDEQAIAVLTKMVKQRRDSIAQYEAANRPELAEAEALEVQVIETFLPKPLTEEEVAALIDATIEQVGAASMADMGKVMGALKPKVQGRADMGAISSLIRAKLN
1052451..1054178                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; EXU30_04460; phage(gi371671350)         2.85e-50            ShewanellaspD42MAIPRDFINELIARTDIVDLIDRKVPLKKAGKNHTACCPFHSEKSPSFTVSRDKQFYHCFGCGAHGNAIDFVMEYDRLEFVDAIEELAGQLGLEVPREKGTGKRVDHGLSRDLYELMDEANRYFQTQLRQHSDKQKVVDYLAFRDLSDEVVEKFGIGFAPDGWDGLLSRYRQNQDAQDKLLTAGMLIANDNGKRYDRFRDRLMFPIRDRRGRVVGFGGRVLGDGTPKYLNSPETPIFHKGNELYGLYELKQQHRDPQHVLIVEGYMDVVALAQFGVDYAVASLGTSTTAEQFQLLVRSAKEVVCCYDGDNAGREAAWRALETALPLLKPGDTVKFMFLPQGEDPDTMVRQIGKQAFEQLIEQAMGLPEFLFDTLTRTHGTDKGALAKQAIALIQKIQDSVLQNLLLENLAHKLGMNSADDLKKKLGFVEQKAKPLNAKGLQGRGTPLRLAIALLVQAPQLGYGLPKQPALSKIQLTGIDLFNSLLDITRDKQLNSAQLLELYREHQQHSMLIKLAQWDHQVADENQVSEFKQSLLWLSDKYIEQRYQELSLKQPLSKEEKVQLLKLITIMKGKNK
1054315..1056147                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; EXU30_04465; phage(gi331028036)     9.99e-36            ShewanellaspD42MDQTPQSQLKLLLAKGKEQGYLTYAEVNDHLPADMVDSDQIEDIIQMINDMGIRVFEEAPDADDMMMSEDSTDEDAAEEAAAALATVESELGRTTDPVRMYMREMGTVELLTREGEIVIAKRIEEGINTVQCSVSEYPQAIAMILEQFDQYEADEIRLSDIISGFVNPDEDDVAPTATHVGSELSEEELEDEDDDGDDDEEEEEGNKGPCPEEAKEKFTQLREAYEKSLAIIAEKGRDHPESIGSLFIIGELFKEFRLVPKQFDRLVKSMRTMMDRVRVQERLILKLCVEQAKMPKKNFVKAFTSNETNLEWFEAEKTSAKPYAEGLRMVEFDVERCVGKLEAIEQETDLTIAGIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPSPEELAERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATGESLRNATHEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILKSFLDE
1056398..1056474                   tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCCCAGTTCGAGTCTGGGAGGGGCCACCA
complement(1056620..1057519)       PHAGE_Burkho_phi1026b_NC_005284: gp58; EXU30_04475; phage(gi38707948)                1.99e-19            ShewanellaspD42MNKLEAMTAFCVVAEQQNFSAAARELGVSNTLVSRHVKQLEQTLGCLLLKRNTRKVYLTPAGEQYLEQIRPLLKKLNSVEAMMGQFSEQPSGKLTISTTFEMGGQYFAPLIAKYRKQYPKVELNIRLANSPADLFESDIDLAFRVAPNLPNASYIAQSIGQSRLSLWASPDYLAKFGEPTSPEGLIEHELLFFSHSIRKEQWIFEHNGERFTQKLPWTWSSDNGRLLNEAAASGQGIIQAPTYSVNEYVNQGRLVEVMPEYSINNLMVSAVFPHRLKLTNKISSFVAMAKAHFSEFPLP

#### region 4 ####
2776287..2776892                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11920; phage(gi148912776)     5.51e-05            ShewanellaspD42MVTKQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAENASIDGVAGGLSTAVGFVRAQWEVDGRRNTAVILDGTSISLDTRFGFPTGLTNTDVTSVTDTHCQEIFNNVLQSAPRNVLYNADARNQRYTVRVLNGVGGSSTAIDGTTVSGIDLCVYHQVASLVLNQTTGVPTPAPDLNTAGAKGITYNPATGQVLSFTNN
2776955..2777464                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11925; phage(gi148912776)     1.49e-06            ShewanellaspD42MQKQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARVSALQGLKASIQGANTLVYSKAALAGKEKGTSQTVTISGDASASPATNVDVTTDYGYMTALLVNFQNAVQIDVAAGTDPGAAGLTTEWIFDAATGDFWQVGAPSTCKLTYTAAASAGALPTFSAIPAATDC
2777492..2777965                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11930; phage(gi148912776)     3.56e-07            ShewanellaspD42MRKQQGFTLIELVVVIIILGILAVTAAPKFINLQGDAYTSTLNGLKGSLQGANTLVYSKAAIAGQEKGDDETVAISDTDNVSARYGYLQNDATSITTALQLDTTSEWTIVAGSDQTEATVLYQTNSPYDDGTGSSPAVDCHLEYTQLNLLVPYLRMK
2778175..2778708                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11935; phage(gi148912776)     8.50e-06            ShewanellaspD42MINSVKMARGFTLIELVVVIIILGILAVVAAPKFINLQTDARTSTLNGLKGAIQGANTIAYSKAAINGVQDVGDAVASDSGTSRVDIGTGTDAKLNFGYLQSTDVELINAMDISLDTDPSNSADWYIELGEDGAKTAKLFQAGSPYIADDTKECFLEYTPAAAADQIPTYVVKASGC
2779064..2779600                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11940; phage(gi148912776)     4.72e-05            ShewanellaspD42MRTQQGFTLIELVVVIIILGILAVVAAPKFINLQGDARLSTLKGMKAAIQSANSLVYSKASLAGEEKKQSGEVDIGSVDKDGHKLYLYTAYGYIGASMPQVGQVLGENFNLATSRTDPTIAVDEGSEWTAYDGSNSQGINQLTIWQKGAPASCAVHYYPAQNAQSQPTFGPLPAASDC
2779650..2780165                   PHAGE_Pseudo_F10_NC_007805: hypothetical protein; EXU30_11945; phage(gi148912776)     2.33e-05            ShewanellaspD42MKSSQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARVSTLQGVKAAIQGGNTLVYSKAALAGEEKKGANSDRGSVAIDALKIVSTRFGYMEGKQAEIVKAVQLDTSEWTLTDESTPGVVKIQQVGAPDSCYILYTEAQAEGALPSFRSDVKADPADTEYLAMPRPSDC
