gi|00000000|ref|CP036220.1|  Mycobacterium avium subsp. hominissuis strain mc2 2500 chromosome, 5438093, gc%: 68.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4107793..4107805                   attL                                                                                 N/A                 CACGGCTACGCCG
complement(4111885..4112106)       PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; EX350_19265; phage(gi985761242)     1.87e-11            MycobacteriumaviumsubsphominissuisKERLNKEIRRRTDVVGIFPDRNALIRLVGAVLAEQHDEWAESRRYLGLDVLSKSRADHTPSTEQEDTPAALTA
complement(4112150..4114092)       integrase; EX350_19270                                                               N/A                 MycobacteriumaviumsubsphominissuisVTTVLVGQPVGADEVVADYLDHVATLGLSGRAVRDRIRIARDFTARHRDLHAWMTLPAAERIAEIRDTGAWPLICHTIGTGRLRLDVELAAVKQLTGLGRAVEDRDPSGFAALRNAGIRLGWRSSWVETVLGECLAVVLAHHGGMVADLTGDALDDFDAALSRTVVPPSSRRAYRGRLASLRQLLFETAVIDTAPKRRRWARSLEQRFTEVEMPDPIRQTLLRYIGVRARCCGPNRSSRSTTCCPSPNTSPLTIPTSSACVNSTGAASRATNGIAPGAGVVSAPPRAPGAPSRPRWPSRQCSVCATCSTTSPPGAGRRPHHGGWYSPPTSPNSTSRCHARHPMWTRQTPLPTCRIRSPASAPCCVVPACGRGNCSTSNWAASSTTDRPEPGRCHWASSPPNAWSRSPPRPSPRSTSGSPSAARTGRCRTHAPACSPTFCSPGTDAAWATPGCATGCSPPLNPPGCTVPTAASWSLHISCATPGPPNSPTPGVCRPCPYSGTSLHKRSATPPWPRPPCARPTTKRWARCAASSPSPRSANRSCPTRSAGCTVKCKPALHTDTALATNPRARALMPTSAKPATTTSPPPNSATRSPTNSPTSRPSEPTPSAAAGPTKPPATTASPTPLPTTSSASIDGA
complement(4114089..4115138)       PHAGE_Mycoba_32HC_NC_023602: integrase; EX350_19275; phage(gi589893371)              7.75e-12            MycobacteriumaviumsubsphominissuisMRVLKSDSGYVLEGDWDGQDAVNAFLNHLAGRGFSAATVRAYAFDVANLSRFLVQQAVGLAAVDAPLVFDWIDWQGVRRTDQPTGGHRSSTPPAASTVNRRVAAVRALFEYLVMTGVCTDNPVPSPRRGQGLRQSQRGLLGHLGPGRARSGGRLVRQPQRLPESLSTNDVDAFLATLATHRDRAMVLVMLLGGLRSAEARGLLLADVDMGRRRLRVIGKGGKERHVPVDAAFFTELAAYLRWERPPGLATPQCFVVLRGPTTGAPVSEAGLRSLFRRHRETSGATRVRPHRLRHTYGTELSAAGIDLLALRALMGHVSPETTARYVHLSIEQLAAEYGAARATLAGARQ
complement(4115207..4116319)       PHAGE_Paenib_Vegas_NC_028767: transposase; EX350_19280; phage(gi971741608)           3.33e-59            MycobacteriumaviumsubsphominissuisMILRGTDQSHSSKGINAMTIAHDIDLSAVLAERLTTTHPDVLRELLAAFIHALMGAEADAVCGAGYGQRSSERTNSRNGYRHREFDTRAGTLDLAIPKLRQGSYFPDWLLERRKRAERALTTVVATCYLLGVSTRRMDKLVETLGITSLSKSQVSVMAKELDAAVEAFRTRPLDAGPYTFMAADALVLKVREAGRVVNVHALIATGVNAEGYREILGIDVTTAEDGAGWLTFLRSLTARGLSGVRLVTSDAHAGLVAAIGATLPGASWQRCRTHYATNLMAITPKSSWPWVRTLLHSVFDQPDAGSVAAQYDRIIDALADKLPKVADHLEDARADLLAFTAFPKQIWRQIWSNNPLSVNRLSGDTVRAAA
4116431..4116613                   DNA-binding protein; EX350_19285                                                     N/A                 MycobacteriumaviumsubsphominissuisMLTAHEVRAMTGVPVSTLHEWAARRERGIDAPGPHHLRLSDRHRRWLLDDVKDWLESTRV
complement(4116700..4117158)       PROPHAGE_Escher_CFT073: transposase insI; EX350_19290; phage(gi26250328)             7.18e-35            MycobacteriumaviumsubsphominissuisIIGNNHLSAIGTLVERQTRMLRLVHLPRSDADSLHAALVARMKDLPPTLMRSITWDQGTEMARHLATTDKLGAPVYFCDSRSPWQRGTNENTNGLLRDYFPKGVTLISHPPEQLLAVEHELNHRPRMVLQDRCPADLFAALLVSSDPSVLRR
complement(4117274..4118785)       PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; EX350_19295; phage(gi100001)      2.09e-61            MycobacteriumaviumsubsphominissuisMAKGPSGIDAANTTRTEALVNTGELSWPDPDQAAWQVRQMQRKLHHWAVEDSDRRFDDVFNLVHHPDFLTVAWERVRGNKGARSAGVDRLTPASITGDAETVAFLSHVRTELKARTFAPLPVREILIPKPGSSKLRRLGIPTAMDRTVQASLLLVLEPIFEADFEPVSYGFRPRRRAQDAIAEIHALGTRNYHWVFEADIAACFDELAHSAIMERVRTRIVDKRVLALIKAFLKAGIMSGDGTVRESDTGTPQGGILSPLLANIALTVLDAHFRVKWDAHRTSQRRDAHRKRGGATYRIVRYADDFVIMVAGTKAHADALWDEVADVIAPLGLRLSVEKTQVCHLDEGFDFLGFRIQRRRKKGTNKAAVYTYPSKKALLSIMTKVRALTKKARHHGLADLLGRLNPVLRGWCAYFRHGVSKATFGYLDSFAWHRVTQWLLKRHKRITWAELYRRFLTGRPGNRPQENGIVMFDTTTVPITRYRWRASNIPTPWTSTAATSVPA
4118977..4118989                   attR                                                                                 N/A                 CACGGCTACGCCG
complement(4119053..4119274)       PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; EX350_19300; phage(gi985761242)     9.77e-11            MycobacteriumaviumsubsphominissuisMERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSDQSAETIAPTAALTA
complement(4119318..4121248)       integrase; EX350_19305                                                               N/A                 MycobacteriumaviumsubsphominissuisVTTVLVGQPVGADEVVADYLDHVATLGLSGRRYATGFGSLATSPHATATCTPGRCRQPSGSPRYGTPGVAADLSHDRHGRLRLDVELAAVNSPGWAAQWRTGIRADSPRAECGIRLGWRSSWVETVLGECLAVVLAHHGGMVADLTGDALDDFDAALSRTVVRHRRGGHTGGGWPACGSCCSRPGHRHRAETPAVGPPRAALHRGGDARPDPSDVAALHRRARGGAAAQIGRVADQRPAALRRIPHRSPSRRHQPATRPELHRGLPEMESHPGLAWSARRRGRRAHRLGAVAQSAVLSLRNLLDDITAWGWAQAHHGGWYSPPTSPNSTSRCHARHPMWTRQTPLPTAGSVRPHRPDRAAWCRPAGGGTARPRTGQHHRLRTGRNLAEGATGQARHRTHGPALRRDPRRARRVGRPPRHAPAAAAPTHRRAHRLSVHAARTPPGLHPAAQRAAHRRIRRVAPSDGGVLMVTPHQLRHTWATELANAGMSLQALMSLLGHVTPQMTIRYATLASPTLRAAYDEAMGKMRRSSPSPRSANRSCPTRSAGCTVKCKPALHTDTALATNPRARALMPTSAKPATTTSPPPNSATRSPTNSPTSRPSEPTPSAAAGPTKPPATTASPTPLPTTSSASIDGA
complement(4121245..4122291)       integrase; EX350_19310                                                               N/A                 MycobacteriumaviumsubsphominissuisMRVLKSDSGYVLEGDWDGQDAVNAFLNHLAGRGFSAATVRAYAFDVANLSRFLVQQAVGLAAVDAPLVFDWIDWQGVRRTDQPTGGHRSSTPPAASTVNRRVAAVRAFSSIWPVSAPTIRCRRRGGDRGCASRSGGCSVIWVPGVHAVAVGWCVSRSVFRNRCPPTMSTRSWRHWQRTGTGRWCWCYSEGCVRPSAWPAARRRRYGPAPASGDRQGRQGTSCPGRCGVLHRARRLPAMGAAAGVGDAAVLRSAARPDDRCTGQRGRAAQPVPSAPGDLWRHKSPPAPFTAYLRHRIVGGRNRSAGVAGVDGACLAGDHGPLRALSIEQLAAEYGAARATLAGARQ
complement(4122405..4123418)       PHAGE_Paenib_Vegas_NC_028767: transposase; EX350_19315; phage(gi971741608)           4.87e-67            MycobacteriumaviumsubsphominissuisMALDQSALLEVLDALRTADAGERITQAAETIYQALIDAELTAFIGASPHERTETRSNQRNGSRPRTLSTVAGDLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFPYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVGDSEDGAFWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVETMLREAAADITAFADFPVAHWKKIWSTNPL
4123512..4123524                   attL                                                                                 N/A                 CTTACACCACTCC
complement(4123897..4124463)       PROPHAGE_Escher_MG1655: IS30 transposase; EX350_19320; phage(gi16132105)             2.53e-19            MycobacteriumaviumsubsphominissuisSTRYLSQDERIEIADLHHSGLRVRTIATRLGRAPSTISRELRRNAPAGRGYQPFDAHRRATARRARHHRRRVDTNDQLGNAVAELLLQRWSPQQISRHLRHRFPDDSSMWLCHESIYQAVYQPNSRFMRPSRLAPHRRSPLRTGRDHRRAHHRQSCRRPRFQQPMLTIHDRSFSAVDRSEAGHWEGDLV
complement(4124463..4124657)       acyl-CoA thioesterase II; EX350_19325                                                N/A                 MycobacteriumaviumsubsphominissuisVIRSPASAVRSASSTSSKADWSRAIAMFLSVVILGRFTTETHAMALLRQGPTRRHHLHHSPGRSP
4124584..4125597                   PHAGE_Paenib_Vegas_NC_028767: transposase; EX350_19330; phage(gi971741608)           4.87e-67            MycobacteriumaviumsubsphominissuisMALDQSALLEVLDALRTADAGERITQAAETIYQALIDAELTAFIGASPHERTETRSNQRNGSRPRTLSTVAGDLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFPYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVGDSEDGAFWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVETMLREAAADITAFADFPVAHWKKIWSTNPL
4125711..4126760                   PHAGE_Mycoba_32HC_NC_023602: integrase; EX350_19335; phage(gi589893371)              7.75e-12            MycobacteriumaviumsubsphominissuisMRVLKSDSGYVLEGDWDGQDAVNAFLNHLAGRGFSAATVRAYAFDVANLSRFLVQQAVGLAAVDAPLVFDWIDWQGVRRTDQPTGGHRSSTPPAASTVNRRVAAVRALFEYLVMTGVCTDNPVPSPRRGQGLRQSQRGLLGHLGPGRARSGGRLVRQPQRLPESLSTNDVDAFLATLATHRDRAMVLVMLLGGLRSAEARGLLLADVDMGRRRLRVIGKGGKERHVPVDAAFFTELAAYLRWERPPGLATPQCFVVLRGPTTGAPVSEAGLRSLFRRHRETSGATRVRPHRLRHTYGTELSAAGIDLLALRALMGHVSPETTARYVHLSIEQLAAEYGAARATLAGARQ
4126757..4128700                   PHAGE_Pseudo_D3_NC_002484: integrase; EX350_19340; phage(gi9635596)                  9.72e-08            MycobacteriumaviumsubsphominissuisMTTVLVGQPVGADEVVADYLDHVATLGLSGRAVRDRIRIARDFTARHRDLHAWMTLPAAERIAEIRDTGAWPLICHTIGTGRLRLDVELAAVKQLTGLGRAVEDRDPSGFAALRNAGIRLGWRSSWVETVLGECLAVVLAHHGGMVADLTGDALDDFDAALSRTVVPPSSRRAYRGRLASLRQLLFETAVIDTAPKRRRWARSLEQRFTEVEMPDPIRQTLLRYIGVRAAVLRPKSVESLINDLLPFAEYLTAHHPDVISLRELDRSCIEGYLKWNRTRGWRGQRAAAGAGRTVSAAVAQSAVLSLRNLLDDITAWGWAQAPPRRLVFAADVPKLDQPLPRALAPDVDAAVMNAVAHLQDPFARIGLTVLRGAGLRAGELLDLELGSIIDYGPAGTWLKVPLGKLATERMVPLSAATLAALDEWVALRGTHRPLPHPRTGVLTDFLFTRHGRRLGYTRLRNGLLTAAESAGLHRPDGGVLMVTPHQLRHTWATELANAGMSLQALMSLLGHVTPQMTIRYATLASPTLRAAYDEAMGKMRRQFTLTPVGKPILPDKVGWLHSEMLKTRVAHGYCARHESAGACPYANICETCDNYVTAPEFRDTLTDQLADVQALRTDAECRGWTDEAARHDRVAHALTDHLQRLDR
4128744..4128965                   PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; EX350_19345; phage(gi985761242)     9.77e-11            MycobacteriumaviumsubsphominissuisMERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSDQSAETIAPTAALTA
4129003..4129015                   attR                                                                                 N/A                 CTTACACCACTCC
complement(4129020..4129268)       helix-turn-helix domain-containing protein; EX350_19350                              N/A                 MycobacteriumaviumsubsphominissuisVLASSRRVKKGPGRRPQSAKRQRFMELRARGWSVRAAAREVGVSRSAATNWTRGYKTYRNGVAVGFVPPLDRLAVRQISTGHV
complement(4129520..4130647)       integrase; EX350_19355                                                               N/A                 MycobacteriumaviumsubsphominissuisMESDDPVLAAAAIHARELGAAHDWCGETTNRCLDALLTLLAGRPTGDRVPLTEVRTRPHRLASRRRLVEILSHFDLLKDDTEPPIRAWIDRVTAELPPGFAEPAHHWLLTLLVGGARARPRSPRTLYSYFGSVKPLLAHWSTSYEHLREVTRADVDAALRPFQGNQRHNLIKALRSLFRHAKKNALVFSNPTAGLKSQPVDQDLLPITDDEVRSIEQLASEPLERLVVALSVEHACRTAVIRKLTLDDIDLPNRRITLAGHNQRLGELTHIALNTWLDHRRDRWPHTPNRHVLLTTKTALRTTPVSQKSVKPSLSDNGFTIERIRADRILHEALTAGPDPLHLSLVFGISHNTARRYTTVAERLLSDELEQPVEP
complement(4130788..4131111)       XRE family transcriptional regulator; EX350_19360                                    N/A                 MycobacteriumaviumsubsphominissuisMKWNLRLAAANRGIWKASELQRMLADRGLVISAGKMSGLWSGNPNAIKLNDLDVICAVLGCGVDELLIPEPETVAAATPVTDDESAAVGEARSVTPRTRAGRSLPPR
complement(4131108..4132184)       PHAGE_Pasteu_F108_NC_008193: integrase; EX350_19365; phage(gi109302897)              7.94e-07            MycobacteriumaviumsubsphominissuisMALAVVRDLREQRAPATEDELAGFETDVLAGFVLARASAGLVDSTIRNDVNHLELIRDWFGRPLWEIQPADADTYFGKVLRDARASTRTGRAAALTVYFQFLELRHKVELHNLSGRVIECPLDEINRPRAWVDPQLRIPPTADEVEQLFAGWRGELVTCRKFAPTARNYAVARLVADVGLRINEARMLDLDDVRWELGRFGKLNVRHGKGSRRKGPKPRVVPLINGADRSLQWFIEDVLGLFDVDPKNHAAPLFPSERKNIDGTCMRATADVYRRALAEATDRYLPRWSGKLTPHVLRHFCASQLYLAGMNLFAIQELLGHAWTGTTARYIHVHATHVEDAWVTGQRRVADRWKGLAR

#### region 2 ####
complement(4273950..4275502)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; EX350_20030; phage(gi557307612)     6.50e-16            MycobacteriumaviumsubsphominissuisMSYREVSVIEIVEMLRLWLQGLGLREVARLSGTDRKTVRRYVDRARACGLDRDGGDSQLTDELLAAVIAEVRPHRPTGKSLAWETIAAEHEQIKAWLKDGLTLTKIHTLLGRRGVVVSYRTLHRYATTELGFGRRQATVPVADCEPGAEVQVDFGRLGLLIDAGDGRRRVVHGLIFTAVYSRHMFVWPTYRQTLNDVIAGFEAAWVFFGGVFAVVIPDNMKAIVTTAHATEPRLNDAFREYAQARGFAVDPTRVRSPKDKPRVERMVQYVRSNFYAGEHFRDLGDCRERARLWCAQTAGLRIHGTTRLRPAEVFAAEELPALGPVPEDVFDIPVWTHPKVASDRHVQIAKALYSVPGELVGKRIEARTDAHAVKLYWRGELIKVHPVMAPGRRHTDPADLPAHVSVYAMRDINALQRKAAAHGTHVGTYAAAVLEHPLPWTKMRQVYRLLGLVRRHSAAAVEDACRRALDAEVIDVGLIERIVTRGGGEQMPLIPKPPGRRPGSCGMAPTSRSAGPHGA
4276046..4277278                   PHAGE_Paenib_Vegas_NC_028767: transposase; EX350_20035; phage(gi971741608)           3.93e-78            MycobacteriumaviumsubsphominissuisMALDQSALLEVLDALRTADAGERITQAAETIYQALIDAELTAFIGASPHERTETRSNQRNGSRPRTLSTVAGDLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFPYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVGDSEDGAFWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVETMLREAAADITAFADFPVAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSDQSAETIAPTAALTA
complement(4277507..4277923)       XRE family transcriptional regulator; EX350_20040                                    N/A                 MycobacteriumaviumsubsphominissuisMSEDDPAWLLVHAVEQARLEQGLSKHDLARLARVARPTISRLINHGMVPSRAATLDRIGSALGWEAGTCAALLAGQPLPGPRAPVTRSAQLVAARLTEIAEEARSAAGAAEQSILRLKTIEERARAAAQFVLGGSVAD
complement(4277920..4281018)       PHAGE_Mycoba_Adler_NC_023591: ftsk/spoiiie family protein; EX350_20045; phage(gi589892217)     1.30e-54            MycobacteriumaviumsubsphominissuisMTTEFTLHVKRDGAYDEEGFFALPDTLDTASAVAFARKMARYHADSRVTQSSTAAASKVVDLYEILGHADPGDIDVEEAWAATRLGPPLQDDEGELQWGREWMRFPIGIDPRNGQPVALDLKETHEFEGMGHHVVVVGTTGSGKSVFLTALITSACLTHSPDSLKVAVFDFKGSALAHLVAGFPHCVAAMSNLRNDRLWIVRMEDVLYGEMERRKSWLDRAGVSDIAEYEYLRIHKKEKLRPMPHLLLIVDEFTQMFAEHDGAKAVMDEVGRQGRSQGLRLVMGSQRLGHQMQGGIMSNIPVRVALRTVGDTDSHEVLGSDEANHLPKKPAGAGLLKVGANKNLTRFQTAFVLKSYVPPQRAAAAAARQEAGYLEPQEFQAVGMPALQMARDGEGEQTKIPEPRAIIGADGRTVKQVQATVDCLNRLNLPPLQAMWLPPLQPVPADELVRRLRGQPWDVDYGSAQSELSRLMFPVGIEDRPRDHRQLVYAPNLAEGNCAVIGMGQSGKTVAIATMISGAALLYHPRRLQFYVIALSGPDLNLVAGLPHVGGFAREVDPEQVKRIIAEMLALIDQREQAFTKLGLTLTKLRERKFGGVPGEVPQDSFGDVFLVIDGWPTFVKNWELLVSDVERILAKGPDVGVHAIVSTSGWVANKFPSGMTKNFTSNVELKLGDNDDMTVNNVKVARDVPFGEQKMFLDEEDDTGGEVEQVNVVKIRGRGTTMEGYHFQAGLPEITVQGRRADVAAAVEPIQRLAGPDSAAARVRMLPKIVGIDEVFAQWEQREHGPGGVDWSGVVPFGISEIGLEPAVANFAATPHLLLTGRPECGLSSGLATVAQAVMRVYGPEQAQIYVVDPHNELLRVVEGEHLGAYVFREDQVRALGDSLGAILTERMPMTDLSQAELAAGTRRWSGPEIFVFIDREETLASWDTGGFVAGTGYPLGPLARFIARGKEVGLHLVVSRRIAQWGRTLTNPIIGELLKAKAPVVVMDGDPDEGPIVGKTKAVPADPGRGLYVTDRMVAPVQIAFPASAH
complement(4281008..4282063)       PHAGE_Mycoba_Adler_NC_023591: ftsk/spoiiie family protein; EX350_20050; phage(gi589892217)     1.86e-17            MycobacteriumaviumsubsphominissuisMQSVRDSPIAPRRLPMTKAQIILPAVMGAAFLGMMAMILTQPGLRSGPMSLFSLFVPVMMIVSFAGVFMQGRFGGGDKALSPQALEEERRAYMDELDQTRDVIQSDAERQFANYQFLHPEPAMLRGLVGSPRMWERSGSAEDLAMHFGFVRFGTGTSDLAKKLAKPRLGESADYEPVCYDALRKFLLEQSKISGIAKPLSLKVIPLMTLVGEDGPDTVHGVVRAMICQAACFHSPQDLKVMVVTDEPARWDWVKWLPHCQHDKLFDSGGPLRMVWTSPTAMDAAVGHELHGARKNYGDPGAADGVRPHWLVINDQLRVDSEWDTLNRRGVGGVAGVTFVRVVVKEGAADDN
complement(4282137..4283627)       PHAGE_Mycoba_Adler_NC_023591: hypothetical protein; EX350_20055; phage(gi589892216)     4.41e-70            MycobacteriumaviumsubsphominissuisMPLKLASKTQVSGHFFVRRRLSFALLRRSVSMEINPVRWHRTLLMLSAVLGVVLVVGAFVYGWFRPAGVIDDSSKIVADRSSGALFVVVDKRLYPALNLVSAQLIAGSPDRPTFVASGEIAKWPKGPTVGIQGAPVETPAVVSPQVSRWAVCDTAPTTVGGSPLVTGINGQLLLGEAAGELAGSEALLLSYGPQVHLVTNGVRMPIDLSQSAVAGPLGIAPGAQATGMSRALFDALPAGGPLAVPAVPGAGGPGQVDLGAGVVVGAVVASRDVAAQSDRFYVVLADGVQEVSPVVASMLRQHDSFGLATPPQISPDHLAHIPLRHVLDVDYYPRSPVRLVDAGSRPVSCVAWQWSVSERQARLAVISGRGLPIRADQRAKMVPLVGAGNGGVQANQVLVGDGASTFVSTTGQALDSPARETMWLTSSTGSRYGVPFDDNSVQALGLVLSQVRPAPWSMLQVWPAGPELSRAAALTVHSPSDAVAVLPTKTNVRAGG
complement(4283805..4283977)       type II toxin-antitoxin system prevent-host-death family antitoxin; EX350_20060      N/A                 MycobacteriumaviumsubsphominissuisMYADDDDSGRETVYLLGSRENARRLMAAVARDRAVVPGWRALLSRWPNSRRWSAARSGA

#### region 3 ####
4725054..4725080                   attL                                                                                 N/A                 TGGCGGTGGCGGAGGGATTTGAACCCT
complement(4725604..4726719)       PHAGE_Mycoba_Papyrus_NC_022053: tail sheath; EX350_22335; phage(gi530545198)         9.77e-14            MycobacteriumaviumsubsphominissuisMFESTAANPTLLADQVSSLLVQPLEAASVVLSSGPRIFDTAGVLRIPKLTGSSSVGFVGENELIPSDHDTTFDEVVLMPTERKSIKVIERYSRELARQAVIGIDATLKNRLVKVVSDKLDTALLTGKGQATNEVQTVTVAVGGNPFTLSYRGQETGSLANGAAASTVQTALQGLSTIGSGNATVAGSAGGPYTVTFGGTLAATSVDQLGAAGATVVTTSEGESANGITGLINQPGVQTGELDVTDADSLLDAIALASAAEVTPTRWFLSGADFIALRKLKDGNERYLIESDVTLDTTYRLFGIPVTVTNKLATGKGILADTSQIAIARDLAPSVTILSERYADYDQIGIRVVTRYDLGLLHPEAVIVLTAA
complement(4726836..4727063)       hypothetical protein; EX350_22340                                                    N/A                 MycobacteriumaviumsubsphominissuisMARFSWGGVDDGGPVRGNLAAITVVEADRYVIDGGFVTFVLNEENIVSVPERKVAVVSKLNDDNSSMFHLEEPKK
complement(4727079..4727555)       hypothetical protein; EX350_22345                                                    N/A                 MycobacteriumaviumsubsphominissuisMSEQQESPIDQTVEEPTPEDYEAVVKAMQADGHDIDDPESGHDGAQSDDDPDTFPRAYVEDLRQENGKYRQRAQQGEQYAQRLHTELVRATGRLADPTDLPFDAEHLDDASKLTAAIDDLLARKPHLTNRRPIGEIGQGAIPSGGTVDLAAILRQQAQ
complement(4727527..4727793)       hypothetical protein; EX350_22350                                                    N/A                 MycobacteriumaviumsubsphominissuisEPLEAAQNATIDAIQQQPLVEGWTRAMDADPCQLCRWWWREGRIWPKEHPFQSHKGCNCAPKVVLAENIESTMYTRRLERERAARITD
4727861..4729020                   PROPHAGE_Escher_CFT073: transposase insF; EX350_22355; phage(gi26249410)             4.02e-42            MycobacteriumaviumsubsphominissuisMPKPFPAEFRADVIAVARKGEAPLRQIAKDFGISEACLHRWLKIADREDGAYRPASAAASDDVSAQLRDAHKRIKLLEQEAEVMRRAVGYLSRDANPKMMYPLVLDLADDGVPVAVTCRVLGFSTQAFYKWRKAPVSQRDWDDAHLINAARDIHVDDPAFGYRFIADELPARGISASENRVARLCSQERIWSIFAKKRGLNRRSGPPIHDDLVQRQFSAQTANQVWLADITEHRTDEGKLYLCAIKDVYSNRIVGYSMDSRMKSSLAVAALDHAVALRSPAATIVHSDRGSQFRSRKFVHALLHNGLHGSMGRVGACGDNAAMESFFALLQRNVLDRRRWTTRAELRLAIVSWIERTYHRRRRQRALGRLTPIEFELLHTPVATAA
4729335..4730567                   PHAGE_Paenib_Vegas_NC_028767: transposase; EX350_22360; phage(gi971741608)           3.93e-78            MycobacteriumaviumsubsphominissuisMALDQSALLEVLDALRTADAGERITQAAETIYQALIDAELTAFIGASPHERTETRSNQRNGSRPRTLSTVAGDLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFPYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVGDSEDGAFWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVETMLREAAADITAFADFPVAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSDQSAETIAPTAALTA
complement(4730606..4730860)       hypothetical protein; EX350_22365                                                    N/A                 MycobacteriumaviumsubsphominissuisMTSIEQHQSRTEALAAAAAAQAVTVYTAFQAGRLTRDQAEVLIAAVVNAANAAAVSLADVGLQVQIEAATGLPAPATVTSRGVV
complement(4730857..4731749)       PHAGE_Mycoba_LadyBird_NC_028744: portal protein; EX350_22370; phage(gi970580097)     5.80e-26            MycobacteriumaviumsubsphominissuisQISHYRANTTGATTVGYNLVDTLANPLGVVPVVGLRNGDLILGRHGSSEIDDLKPLVDALNKLLIDMMTTSEYTGRPRRWATGIELTEEPVLDENGNVILDDEGQPVTTEVNPIPEGNRAMLAEGPEAKFGQLDAATLTGYENAVNILLGQIMAVSTLPAHYVGVFTDNPASADALRAAEASLTARAEARQATFGRAWEQVAKLMLAVRDGRDPLQIEARVQWADAATRSVARRRMQSSSCIRPTCCPPRMHWRSSVTPTTRLLRSALRGALRPLTPRETSQVSRRGRLNRGRRHGA
complement(4731786..4733047)       PROPHAGE_Xantho_306: transposase; EX350_22375; phage(gi21243165)                     4.85e-94            MycobacteriumaviumsubsphominissuisMPKEQSPGKPTTRRYSAEEKAAAVRMVRTLRAELGTEQGTVQRVARQLGYGVESVRTWVRQADIDEGLAPGVTTAESKRVQELEQENRELKRANEILKRAAKFLRGGARPPTQEIVEFIDANREEFGVEPICTVLRSAGLQVALSTYYDTKARVPSARALRDAVLGPALCQLWKDNYCVYGARKLWKTARREGHDVGRDQVARLMRAAGIEGVRRGKRVRTTKPDPAAARHPDLVKRNFTATAPNQLWVTDLTFVPTWAGVAYVCFIIDAYSRMIVGWRVASHMRTSMVLDALEMARWSRGNMLPGLRCHSDAGSQFTSIRYGERLAEIGAVPSIGTVGDSFDNALAETVNGYYKAELIYGPARTGPWKTVEDVELATLSWVYWHNTSRLHSYLGDIPPAEFEAAFYDAYRTDQPLIGIQ
complement(4733103..4733579)       PHAGE_Strept_phiSASD1_NC_014229: gp23; EX350_22380; phage(gi298103488)               1.44e-10            MycobacteriumaviumsubsphominissuisMTDNQLLTHLMQKLDEPAARYHELNLYYQGEQPLAFLSPEAKIALGQRFGRMASNIPRLAVTALAERLRVTGFTGDANDLWPDWIRNDLDQLSGVAHREALLLGDSYVIVWADKLGRPKVTIESAKQVVAQHDPGTRQIIAAAKRWETKTTTEVMLYEP
complement(4733576..4735051)       PHAGE_Strept_phiC31_NC_001978: gp33; EX350_22385; phage(gi9631142)                   8.26e-53            MycobacteriumaviumsubsphominissuisMKAGPKASVDSTSLPWRPRSVGSARFGKFCERFVKVPKGTGARSPLKLRPWQRDLVGSVLDAIPQPRTAGWMLPRGSGKSSLVAAWGLYELFEGGEGATVCVVAVDERQAGIVFGIARRMCELDDDLARRVQIFKERLVIPARDAQFHCLPAEPKRLEGLDYTLAILDEAGVANRDSYEVLTLAQGKRETSTLVAIGTPGPNLEDQVLLDLRQYAAEHPKDTSLVWREFSAAGFEDHSVDCAHCWELANPALDDFLHRDALHALMPPKTRESTFRRARLCQLAADTEGKFLPGEVWDSLSTGKGVPDRAEVVIALDGSFSDDTTALLVGTVSPEPHFDVVGVWERPQRKDTEYRVPIADVEAAIRACCRRWQVVEIIADPFRWTRTLQALEAEKLPVVEFPHSPARLTAATTDLYSAAINGRMTHSGNTKLAAHIAAAVIVEDARGMRLSKQSRSRTAPKIDLAACLVMAHSRATWRATHKKRKKTRSFAA
4735066..4735281                   hypothetical protein; EX350_22390                                                    N/A                 MycobacteriumaviumsubsphominissuisMIWVTHLEPVPGEEQLVKTNFSDWKYAIDPSGALNLTNGKEKVVFGPGFWVRIGDDTGPPKRTPAKVHRVR
complement(4735284..4735667)       hypothetical protein; EX350_22395                                                    N/A                 MycobacteriumaviumsubsphominissuisMTLKPCVVCGEPSAKSRCPSHRPKDRKPSRQQRGYDAAWQELSRRARRLQPWCTDCGSTEDLQLDHLPSAWERKAAGKTIRLGTDTEVVCGSCNRGRGKARGGDPNRTGQHPHAKAQGALHTGGGYV
complement(4735664..4735927)       hypothetical protein; EX350_22400                                                    N/A                 MycobacteriumaviumsubsphominissuisMNDRQIDDYVPPLDAIALTPQSIDFFYAAPGGNELIGMMLHTDNLGEFAVLFTPEAARKVATSLTSMAVTDLDRLRHQHRQQKATDQ
complement(4736149..4737300)       PHAGE_Mycoba_Firecracker_NC_023712: gp20; EX350_22405; phage(gi593776533)            6.44e-61            MycobacteriumaviumsubsphominissuisMTDEFWSSRPALQHVLTLARARGVGPWATLGAVLARAIATVPPEICLPGIVGSRMSLNLFIALVGPSGGGKGAAEAAALDGFSLPYVEIVPLGSGEGINRTFRPVGTKPDEPNPVTAAIFSAAEIDTVAAVASRQGSTLSSELRKVYSGEQLGFANAGKDTRSIVAAGSYRACLTIGVQPLRSHTLLGASDGGLPQRFVWLPTSDPDAPDEPPPDPGKWKVSRPSWLRAIGSTVDLIVPETASKAIRAHRLAVLREDPHVDPLDGHALLTRLKVAAALMALDGRTVVSAEDWSLAGYVMDVSNYTRERCQRALAEQSRSANAGRALAAADREEIISDRKLQRAKEAILRKMADGRQLPRHLIRTSLKADLRDYFGPALDALLTE
complement(4737526..4737936)       hypothetical protein; EX350_22410                                                    N/A                 MycobacteriumaviumsubsphominissuisMTQSSDTDQDGRFSGDRYERLVQAAEVIASDPGIENADSLFNGEFLRTFIRELVDARVLDGLTERDCNTFAMLVVLDTRLGPSRLAWRIHRWLEGDHLDRNTDSDNPFAVCSALASALKIMLDGFVEAFAAQDAKS
complement(4738031..4738222)       PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; EX350_22415; phage(gi423262035)     8.41e-05            MycobacteriumaviumsubsphominissuisMSLPPVATARQLADFLGTTEASLAQDRYLRRGVPYTRVGRRIRYLREDVLKYLQANRISGDAA
4738359..4738892                   PHAGE_Mycoba_Dylan_NC_022325: DNA binding protein; EX350_22420; phage(gi543170549)     6.21e-18            MycobacteriumaviumsubsphominissuisMAGKKLELDETGRAVAENITRIRTARGLNYTELSKNLMRLHRDITPLAVRRIEEGQRRVDVDDLMAIAAALNVSPAALLMPRATRTDELVQTTAMAEPATAERVWDWVAGEQPLVPYGDLSGNDQWVEFAHASWPAWRVREMYDQMYQGAVEEARREGRDLAKEVAALEARDDHGDD
4738879..4740039                   PHAGE_Mycoba_Minerva_NC_026584: integrase; EX350_22425; phage(gi764159278)           4.19e-37            MycobacteriumaviumsubsphominissuisMATIEKYETASGVTLYRVRYRKTDNRQTDKRGFRTKKAAEAFANTVEVKKLTGEFIPETAGRITVAELDWLTRKKQATAPSNYRMIESAWRVHVLPKWGRWQVAKVTVPDIESWVAQMVRDGRGATTVLRAHGVLSGVLGDAVKARRLASNPARGIEGLPRKSARRHVYLSADDVHRLAAESGEHRPLVYVLAFCGLRWGEAIALRVRDVEFLRRRLVVAENAVQLGVDHAVGQTKGRAVRSVPVPSFVLDELSPLCSDKEPGWLVFAGPDGKYLPRPKSSGGWFAGAVKRSKVQPITPHDLRHTAASLAVSAGVNVLALQRMLGHKSAKVTLDTYADLFDTDLDAVAVTLHKSYSLEKCGQSVGTEWAGSGSANKEIGLYLQCRV
4740045..4740071                   attR                                                                                 N/A                 TGGCGGTGGCGGAGGGATTTGAACCCT
