Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 8 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              19Kb                     intact(100)                   transposase,terminase,portal,coat,head       1558706-1577795          0                        19                      17                               2                                100%                             0                                no                               5                                PHAGE_Entero_IME10_NC_019501(9),PHAGE_Shigel_Sf6_NC_005344(7),PHAGE_Salmon_118970_sal4_NC_030919(7),PHAGE_Salmon_103203_sal5_NC_031946(6),PHAGE_Entero_Sf101_NC_027398(5),PHAGE_Entero_UAB_Phi20_NC_031019(5),PHAGE_Salmon_HK620_NC_002730(4),PHAGE_Salmon_SPN9CC_NC_017985(4),PHAGE_Salmon_vB_SemP_Emek_NC_018275(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Salmon_epsilon34_NC_011976(1)   9                                47.36%                           51.73%                        
                                  2              35.4Kb                   intact(150)                   integrase,transposase,tail                   1631678-1667092          1                        30                      26                               1                                90%                              3                                yes                              9                                PHAGE_Shigel_SfII_NC_021857(11),PHAGE_Shigel_SfIV_NC_022749(8),PHAGE_Entero_SfV_NC_003444(8),PHAGE_Entero_SfI_NC_027339(6),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_Sf101_NC_027398(2),PHAGE_Salmon_SPN9CC_NC_017985(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Salmon_ST64T_NC_004348(1)   14                               36.66%                           47.11%                        
                                  3              70Kb                     intact(150)                   transposase,capsid,head,portal,terminase,lysis,lysin,tail,integrase     2016293-2086335          8                        64                      60                               1                                95.3%                            3                                yes                              27                               PHAGE_Phage_Gifsy_1_NC_010392(15),PHAGE_Entero_lambda_NC_001416(14),PHAGE_Entero_cdtI_NC_009514(13),PHAGE_Entero_mEp460_NC_019716(12),PHAGE_Entero_HK630_NC_019723(12),PHAGE_Entero_HK629_NC_019711(10),PHAGE_Salmon_Fels_1_NC_010391(7),PHAGE_Salmon_SEN34_NC_028699(6),PHAGE_Entero_N15_NC_001901(5),PHAGE_Phage_Gifsy_2_NC_010393(5),PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Entero_mEp237_NC_019704(5),PHAGE_Entero_phiP27_NC_003356(5),PHAGE_Entero_phi80_NC_021190(4),PHAGE_Entero_HK225_NC_019717(4),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_SfMu_NC_027382(4),PHAGE_Entero_Mu_NC_000929(4),PHAGE_Escher_D108_NC_013594(3),PHAGE_Haemop_Aaphi23_NC_004827(3),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Entero_c_1_NC_019706(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Vibrio_12B12_NC_021070(2),PHAGE_Entero_Sf101_NC_027398(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Vibrio_CP_T1_NC_019457(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Aggreg_S1249_NC_013597(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Psychr_pOW20_A_NC_020841(1),PHAGE_Pseudo_DL60_NC_028745(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Pseudo_14_1_NC_011703(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Mycoba_ArcherS7_NC_021348(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Ralsto_RS138_NC_029107(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Pseudo_MP22_NC_009818(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Rhodov_vB_RhkS_P1_NC_031059(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Vibrio_vB_VchM_138_NC_019518(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Mycoba_Bxz1_NC_004687(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Mycoba_MoMoMixon_NC_023733(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Mycoba_Alice_NC_028986(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Mycoba_Astraea_NC_021349(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Pseudo_LMA2_NC_011166(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Pseudo_F8_NC_007810(1),PHAGE_Edward_MSW_3_NC_020082(1),PHAGE_Pseudo_NH_4_NC_019451(1),PHAGE_Pseudo_PB1_NC_011810(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Salmon_epsilon34_NC_011976(1)   15                               23.43%                           51.98%                        
                                  4              10.4Kb                   incomplete(40)                tail,transposase                             2099794-2110226          0                        10                      7                                0                                70%                              3                                no                               7                                PHAGE_Klebsi_Matisse_NC_028750(1),PHAGE_Cronob_CR5_NC_021531(1),PHAGE_Acinet_Ac42_NC_014660(1),PHAGE_Erwini_phiEaH2_NC_019929(1),PHAGE_Synech_S_PM2_NC_006820(1),PHAGE_Klebsi_KP27_NC_020080(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Synech_ACG_2014h_NC_023587(1),PHAGE_Prochl_Syn1_NC_015288(1),PHAGE_Erwini_vB_EamM_Kwan_NC_031010(1),PHAGE_Klebsi_KP15_NC_014036(1),PHAGE_Cyanop_S_RIM32_NC_031235(1),PHAGE_Erwini_vB_EamM_EarlPhillipIV_NC_031007(1),PHAGE_Cronob_vB_CsaP_GAP52_NC_019402(1)   1                                10%                              52.73%                        
                                  5              46.6Kb                   intact(130)                   transposase,tail,integrase                   2213449-2260088          0                        38                      28                               1                                76.3%                            9                                yes                              21                               PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Salmon_SPN3UB_NC_019545(3),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Stx2_II_NC_004914(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_VT2_Sakai_NC_000902(2),PHAGE_Entero_HK630_NC_019723(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Entero_ES18_NC_006949(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Aeromo_PX29_NC_023688(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Salmon_SPN1S_NC_016761(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Escher_pro483_NC_028943(1)   3                                10.52%                           49.23%                        
                                  6              36.1Kb                   incomplete(40)                integrase,transposase                        2408721-2444902          0                        27                      11                               4                                55.5%                            12                               yes                              10                               PHAGE_Salmon_SJ46_NC_031129(2),PHAGE_Mycoba_Shipwreck_NC_031261(1),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Mycoba_Charlie_NC_023729(1),PHAGE_Klebsi_vB_KpnP_KpV41_NC_028670(1),PHAGE_Vibrio_PWH3a_P1_NC_020863(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Mycoba_Butters_NC_021061(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Klebsi_vB_KpnP_KpV475_NC_031025(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Klebsi_vB_KpnP_KpV71_NC_031246(1),PHAGE_Pseudo_M6_NC_007809(1),PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1)   2                                7.4%                             48.89%                        
                                  7              15.7Kb                   questionable(80)              integrase,capsid,head,portal,terminase       2540849-2556550          0                        24                      11                               9                                83.3%                            4                                yes                              9                                PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Geobac_E2_NC_009552(3),PHAGE_Entero_P4_NC_001609(2),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Psychr_Psymv2_NC_023734(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_Ec_ZZ2_NC_031260(1),PHAGE_Xantho_Xp10_NC_004902(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_SANTOR1_NC_031051(1),PHAGE_Entero_EFAP_1_NC_012419(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Entero_IME_EF4_NC_023551(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Strept_YDN12_NC_028974(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Entero_EfaCPT1_NC_025465(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Rhizob_16_3_NC_011103(1),PHAGE_Entero_vB_IME196_NC_028990(1),PHAGE_Burkho_phiE125_NC_003309(1)   2                                16.66%                           50.80%                        
                                  8              55.4Kb                   intact(150)                   transposase,integrase,tail,head              2749711-2805160          4                        67                      54                               2                                83.5%                            11                               yes                              30                               PHAGE_Salmon_SPN3UB_NC_019545(7),PHAGE_Phage_Gifsy_2_NC_010393(6),PHAGE_Entero_BP_4795_NC_004813(6),PHAGE_Shigel_Stx_NC_029120(6),PHAGE_Phage_Gifsy_1_NC_010392(5),PHAGE_Shigel_POCJ13_NC_025434(5),PHAGE_Stx2_II_NC_004914(5),PHAGE_Entero_phiP27_NC_003356(5),PHAGE_Entero_933W_NC_000924(5),PHAGE_Entero_VT2_Sakai_NC_000902(4),PHAGE_Stx2_c_1717_NC_011357(4),PHAGE_Entero_P1_NC_005856(4),PHAGE_Shigel_Sf6_NC_005344(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Entero_SfMu_NC_027382(3),PHAGE_Entero_Min27_NC_010237(3),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Entero_WPhi_NC_005056(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Gordon_BritBrat_NC_030942(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_Phi1_NC_009821(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Salmon_SETP3_NC_009232(1),PHAGE_Lactob_Lj928_NC_005354(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Entero_JSE_NC_012740(1),PHAGE_Escher_bV_EcoS_AKS96_NC_024789(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Mycoba_BuzzLyseyear_NC_026593(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Mycoba_GUmbie_NC_023746(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Vibrio_pYD21_A_NC_020846(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Thalas_BA3_NC_009990(1)   7                                10.44%                           49.55%                        
                                  9              14Kb                     incomplete(30)                transposase                                  2947521-2961586          2                        22                      13                               3                                72.7%                            6                                no                               12                               PHAGE_Entero_933W_NC_000924(3),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Escher_ECML_117_NC_025441(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Shigel_Stx_NC_029120(1)   2                                13.63%                           48.79%                        
                                  10             30.9Kb                   intact(150)                   transposase,capsid,tail,head,protease        3290710-3321696          4                        43                      36                               2                                88.3%                            5                                no                               15                               PHAGE_Entero_mEp460_NC_019716(13),PHAGE_Entero_cdtI_NC_009514(13),PHAGE_Salmon_Fels_1_NC_010391(10),PHAGE_Phage_Gifsy_1_NC_010392(9),PHAGE_Entero_lambda_NC_001416(7),PHAGE_Entero_HK629_NC_019711(7),PHAGE_Entero_phiP27_NC_003356(7),PHAGE_Entero_HK630_NC_019723(6),PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Phage_Gifsy_2_NC_010393(5),PHAGE_Entero_YYZ_2008_NC_011356(5),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Synech_S_CRM01_NC_015569(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Clostr_phiC2_NC_009231(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Cronob_vB_CsaM_GAP31_NC_019400(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Clostr_phiMMP03_NC_028959(1),PHAGE_Escher_N4_NC_008720(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Salmon_64795_sal3_NC_031918(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Shigel_Stx_NC_029120(1)   14                               30.23%                           52.60%                        
                                  11             29.9Kb                   questionable(70)              tail,transposase,integrase                   3416333-3446293          6                        26                      19                               2                                80.7%                            5                                yes                              13                               PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Halocy_JM_2012_NC_017975(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Shigel_Stx_NC_029120(1)   2                                11.53%                           47.50%                        
                                  12             17.5Kb                   intact(150)                   transposase,integrase                        3449797-3467310          0                        27                      20                               3                                85.1%                            4                                no                               7                                PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_BP_4795_NC_004813(4),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Entero_Sf101_NC_027398(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Vibrio_VP58.5_NC_027981(1)   12                               18.51%                           51.59%                        
                                  13             32.7Kb                   intact(100)                   transposase,tail,integrase                   3571287-3603994          0                        26                      16                               0                                61.5%                            10                               yes                              11                               PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_P1_NC_005856(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Entero_SfMu_NC_027382(3),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_WPhi_NC_005056(2),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Halocy_JM_2012_NC_017975(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Entero_fiAA91_ss_NC_022750(1)   3                                15.38%                           50.95%                        
                                  14             10.6Kb                   questionable(80)              tail,transposase,plate                       4047383-4058064          0                        12                      11                               0                                91.6%                            1                                no                               8                                PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Aeromo_vB_AsaM_56_NC_019527(3),PHAGE_Escher_D108_NC_013594(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Entero_P88_NC_026014(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Xantho_OP2_NC_007710(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Acinet_YMC11/12/R2315_NC_028855(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Burkho_Bcep43_NC_005342(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Acinet_YMC_13_01_C62_NC_024785(1),PHAGE_Burkho_Bcep781_NC_004333(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Acinet_phiAC_1_NC_028995(1),PHAGE_Escher_pro483_NC_028943(1)   4                                33.33%                           49.70%                        
