gi|00000000|ref|CP038431.1|  Corynebacterium pseudotuberculosis strain Cap1C chromosome, 2337519, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
430011..430685                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CpCAP1C_0444; phage(gi16129761)     7.95e-13            CorynebacteriumpseudotuberculosisMLVLALDTATPDLIVGLVRVPSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
430686..431177                     Ribosomal-protein-alanine N-acetyltransferase; CpCAP1C_0445                          N/A                 CorynebacteriumpseudotuberculosisMFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHPHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
431179..432234                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CpCAP1C_0446; phage(gi16130960)     5.54e-75            CorynebacteriumpseudotuberculosisMIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
432396..432692                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CpCAP1C_0447; phage(gi156564025)          3.07e-17            CorynebacteriumpseudotuberculosisMANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
432704..434326                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CpCAP1C_0448; phage(gi526178751)     3.11e-96            CorynebacteriumpseudotuberculosisMAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
434392..434583                     Hypothetical protein; CpCAP1C_0449                                                   N/A                 CorynebacteriumpseudotuberculosisMDDGSLNKLWLSRTSSIALLRVPIRKDLPIFHKVQRIGEHVACNSSAPDTRNKFLLPGVHGTV
435004..435594                     PHAGE_Bacill_Glittering_NC_022766: RNA polymerase sigma factor; CpCAP1C_0450; phage(gi568191091)     6.21e-05            CorynebacteriumpseudotuberculosisMRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
435597..436478                     Hypothetical protein; CpCAP1C_0451                                                   N/A                 CorynebacteriumpseudotuberculosisMTERRWARDGVEAAQSVEQLRADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLIDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLKQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
437045..438565                     PHAGE_Bacill_G_NC_023719: gp120; CpCAP1C_0453; phage(gi593777579)                    1.24e-33            CorynebacteriumpseudotuberculosisMTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGVLVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
complement(1791246..1792967)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CpCAP1C_1721; phage(gi526120183)     8.04e-13            CorynebacteriumpseudotuberculosisMTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKAK
complement(1793141..1793320)       Hypothetical protein; CpCAP1C_1722                                                   N/A                 CorynebacteriumpseudotuberculosisMLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1793436..1794422)       PHAGE_Mycoba_PegLeg_NC_021299: NrdG; CpCAP1C_1723; phage(gi508177953)                0.0                 CorynebacteriumpseudotuberculosisMESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1794637..1794825                   Hypothetical protein; CpCAP1C_1724                                                   N/A                 CorynebacteriumpseudotuberculosisMLPHRMAYPKLILGNRLSWPLKKCGLYHLLAFHFTFSSISPLDKISIIKLGNPTRKIPVMLG
1794832..1795353                   Ferritin-like protein; CpCAP1C_1725                                                  N/A                 CorynebacteriumpseudotuberculosisMTHPILLLSIASMSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1795426..1797585)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CpCAP1C_1726; phage(gi158079505)     0.0                 CorynebacteriumpseudotuberculosisMSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1797736..1798173)       PHAGE_Bacill_SP_10_NC_019487: ribonucleotide reductase stimulatory protein; CpCAP1C_1727; phage(gi418489617)     5.19e-17            CorynebacteriumpseudotuberculosisMLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPELVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAALGLLPEPVA
complement(1798299..1798532)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CpCAP1C_1728; phage(gi589892251)     4.29e-25            CorynebacteriumpseudotuberculosisMSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1799014..1799217)       50S ribosomal protein L36; CpCAP1C_1729                                              N/A                 CorynebacteriumpseudotuberculosisMKAREWENAQITVKPLYGFSWRRKERPMKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1799371..1800201                   PHAGE_Bacill_G_NC_023719: gp283; CpCAP1C_1730; phage(gi593777739)                    1.02e-102           CorynebacteriumpseudotuberculosisMDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARIALAFIRPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAAARIEHLWKIGEHKRHLPVEPGDTWWRR

#### region 3 ####
2328330..2329277                   PHAGE_Bacill_G_NC_023719: gp344; CpCAP1C_2233; phage(gi593777800)                    6.04e-66            CorynebacteriumpseudotuberculosisMSEAPNATTVHDVAIIGSGPAGYTAALYAARAELKPIVFEGIEFGGSLMTTTEVENFPGFPEGIMGPDLMDNMRSQAERFGADLRMELVTKVELEGEIKKIWVDDQEFHARSVILATGSAPRYIGAEGEQTLLGRGVSACATCDGFFFRDHDIAVIGGGDSAMEEATFLTKFAKSVTIVHRREEFRASAIMLERAKNNDKIKFLTNNTVSKVLGENTVSGLELTDTATGETSILDVTAMFVAIGHDPRSDLFRGVVDTNDAGYVRVEEPSTRTNVPGVFAVGDLVDAHYQQAITAAGSGCRGAIDAENYLAALDA
2329338..2329661                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CpCAP1C_2234; phage(gi100156)     1.50e-16            CorynebacteriumpseudotuberculosisMNAPIALTEATFKTTVIDSDKPVLVDFWAEWCGPCKKLGPIIDEIAAEMGDEVVVGKVDVDAERNLGAMFQIMSIPTVLIFKDGQKVAEFVGVRPKSEIVAKLRSHQ
2329750..2330931                   PHAGE_Bacill_AR9_NC_031039: ss-DNA binding protein; CpCAP1C_2235; phage(gi100271)     7.67e-09            CorynebacteriumpseudotuberculosisMSDILRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGPMLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQDNPSHLERADIANAFDADVMICLQCDQYQNDKANGVATFYFGSEAGTSSLTGEMLSGFIQREISARTDLVNCGNHGRTWDLLRITAMPTIEVVLGYLTNPHDVTILTDPKHRDAIAEAIVVAVKRLYLLDDDDQPTGTYKFAEMLEQGML
complement(2330982..2331581)       Hypothetical protein; CpCAP1C_2236                                                   N/A                 CorynebacteriumpseudotuberculosisMFWELEESAALRASAAGTPTLEKEAWLAAMLSAYGTCGFNITSADNFASGNPRAYATLLYCPASEAPGCARLPTAPLTSDAYVLTSLHCDPNMVGSGLETMLLDAAIVHLARQGIKALEAFARDESFCDDPFHPQPENIQRIVNSAEEIGLMTVELLESAGFEIIRHHPVLPLLRLHLPPEHALLTVEAIEPLLANVTV
complement(2331691..2332743)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; CpCAP1C_2237; phage(gi435844368)     3.47e-13            CorynebacteriumpseudotuberculosisMAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKKQSHSPRDAKGARISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIREFGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSEG
complement(2332749..2333741)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; CpCAP1C_2238; phage(gi22091150)     2.97e-27            CorynebacteriumpseudotuberculosisMDDQNWEDTPIAAAARRAAQVLTPNSLHLPRPDSSRRLTVANQKGGVGKTTSSVNLAAGLAINGLKVLVIDLDPQGNASTALGVDHRAGTLSSYELLIGECAVEDALQETTASENLFCIPATIDLAGAEIELVNLVRREYRLSDALNTEYMQQAEFDYIFIDCPPSLGLLTINAMTAVDEVLIPIQCEYYALEGVGQLLNNITMIRQYLNPNLHISSILLTMYDGRTKLAEQVMDEVRGHFGDVVLGTKIPRSVKVSEAPGYGQTVLAYDPGSRGALAYLDAARELATRGDYVPSESSGPIGMSPEALREQQEQNQSDGEADHADETSKE
complement(2333846..2334517)       Glucose-inhibited division protein B; CpCAP1C_2239                                   N/A                 CorynebacteriumpseudotuberculosisMKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLEITLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVRLGGKMIAMKGSSVKEELARDERMIFKAGGGKIKIFTVGDQLEDPTTLISIRKVR
complement(2334514..2334672)       Hypothetical protein; CpCAP1C_2240                                                   N/A                 CorynebacteriumpseudotuberculosisMVAAVLLFSFGGVHERCVHFPVLGPVVSYQRDSVVTVPDVCESVEGMKDGST
complement(2334702..2335658)       Inner membrane protein translocase component YidC; CpCAP1C_2241                      N/A                 CorynebacteriumpseudotuberculosisMLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARKMQELQPLMQEIRKKYGKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRSFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQPVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNKIDAEEAEEIEAKKAAKRATAPKPGQRPQNPKKGKKK
complement(2335714..2336001)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; CpCAP1C_2242; phage(gi9628603)     9.61e-08            CorynebacteriumpseudotuberculosisMCYSHDQMSNENNNSRLVRPAGIISGLLYDAVRFYQKYISPLKMGSTCRFDPTCSAYALEAVSRRGAVIGTALTIARLAKCGPWHPGGYDPVPRR
