gi|00000000|ref|CP039261.1|  Lactobacillus johnsonii strain DC22.2 chromosome, complete genome. 1904421, gc%: 34.50%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1088835..1088846                   attL                                                                                 N/A                 TTATTTTTGCTA
1088835..1088846                   attL                                                                                 N/A                 TTATTTTTGCTA
1100089..1100886                   integrase; E6A54_05325                                                               N/A                 LactobacillusjohnsoniiMLFPYEKNFNQWCSSQNLAPRTITSINQSIYYFWNYFLQNSNSEPKVSNVSAQDIRAFIDHLEQDQNKTISTINKYVTHLKKYFSFLYDHQLVTNYLFTDLHGYTFDRTPHICIDWIDQIDEIITWSEISLDCKKVLILIAHGFDPKQFLNLSKANISSINNSSYRSILLTNTEENPLIFQTKTGKQISALTSLTRKIAPDKDILNFDLTPGKLRLSYIYYKVNDPSLSDLKLMEILHCNRKSLTYYRNQLDKLKLAPFTPKRTV
complement(1100915..1101547)       NAD-dependent dehydratase; E6A54_05330                                               N/A                 LactobacillusjohnsoniiMAILGAAGQIAQLVEPIILKKTDVDMVLYLRHPNKLHQVDESREEIIKGDASNFNELKAALAGVDLVYANLAGANIEDQAETVVKAIDTNGIKRLIWVSSLGIYDEVPGKLGEWNKNILGSYLTTYRAAADKITESDLDYTIIRPAWLTNKDEVSYEKTVGAQTPFKGTEVSRLSVADYIVNIIENPAEDLKSNVDLDKPGTDGDKPAWY
1101547..1102250                   APC family permease; E6A54_05335                                                     N/A                 LactobacillusjohnsoniiSFILIAAKQTNNPEKNIPRVLIAVMPSVTILDCLMLLVAIGLNEVILIHRVPRLVLANRVLLLLSECFQSLELLLVLHLILLHLLHPLLPNMGCFRNGLVRKINMMLLGLVLFLLLFVQEPLPKVTYFLSHVQFHPLFNMCHQFQSLNLSIVMNIQHTVFYYLENTLFQLLLLFLVILLTLLLRPYSGLLQLPLPATSLLIRMKSKKNMKTFLNDVKTAA
complement(1102519..1103340)       cell wall protein; E6A54_05340                                                       N/A                 LactobacillusjohnsoniiMMRKVKKRSIITSLGAAAMLASLSVGGTAFAASTDQAKNYQTQLEEHKNLQAYTNPLTVQALITTKGVLPDATSGISNWSQVPAGTVAAWDNKPEVNKAGTSYGTVYVTFPDGSRSRLAVYVTVKDGAASQSSENTNTTSSDKSSSAAVASKSPVKSSQVEGEAKTSAKDTDNDTEKTTTVDKADKDQSAKSSSKANKDVVVKDLGSTTVTEKNASVVSNSKDKDKSSNPISVATRLPETVAKATNPFVIICGALIAAVSGAAIWSKKLKKRN
complement(1103563..1103943)       DUF1828 domain-containing protein; E6A54_05345                                       N/A                 LactobacillusjohnsoniiMKDSEIELIGQNAMNWLKENIHFIKAGSDIEVATPLIGAYGDLVYCWIEKEDDYYRITDDGGTLFKLDPGQENMDLLEEAMDIVIGAGFEFDEETLEIYQVVDQDYIPATLNDLTQLQVALTYLAS
complement(1104033..1104434)       hypothetical protein; E6A54_05350                                                    N/A                 LactobacillusjohnsoniiMYDLEDVLMKSFREDNGISSAFSIEPVDDNEYRVSTNVVDGLNDTIHFYLVVYPNGTYALNDRVFTAQIIDDNIGSFASIASDVARLASEFGVLLDDRGELTRDYINVRDLRNEVNNFTQLLNRVVEFAHIHR
1104723..1105772                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; E6A54_05355; phage(gi588498272)     6.25e-49            LactobacillusjohnsoniiMDSLHSTMNQHIKGKHLSFEERVIIQLRLKDGYSLRAIARELNCSPSTISYEVKSGTVELYHGKVKRYKATQGHDAYQAHRKNCGRKSDFLRKTQFMRYVHKHFFKDGWSLDVCSNRATAVGAFSSRDVVCTKTLYNYVDQGLLDIHNYDLPEKLKRNTKLHRIRRNKKKLGRSIEERPKEINKRNEFGHWECDLVLGHKSKDDEVLLTLSERMSREFLILRIPDKTSVSVMQAFKKLQRQYSEHWNDIFKTITTDNGSEFADLSSLEDVSNTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGEAIDNYSLQDIIDIETWCNSLPRKILAYHTPDEIFERELDLIYQAA
1105839..1106498                   hypothetical protein; E6A54_05360                                                    N/A                 LactobacillusjohnsoniiMEEINLKKLIVGALSCSLLLLTGCRNNLVEPKHKSSAADYAIIQSSHKQSHKKVEKEKPKNKGDKKEKSDKTEQKKDEDIKMDDQLDSLQNREEQSSFESQSSSSSSISTPIQRNEHKASSTLPKSNFGTSFYTVPRRNYSYYNPQPNYYFDNSWTTNSNANATTQSSATSSSNSDNSNTSSSSTASSESSSSSSKETETPASQNNESESTSSTENTQE
complement(1106528..1106968)       PHAGE_Aeromo_Aes012_NC_020879: putative bifunctional protein: NMN adenylyltransferase/NUDIX hydrolase; E6A54_05365; phage(gi472438020)     9.22e-06            LactobacillusjohnsoniiMKRSENVTLTNMCMIKDKDKILVLNRTDPVWPGLTFPGGHVESHEAFHDSVVREIKEETGLEIKDPHLVGVKQFFDHNDERYLVFFYMATKFTGMLKASDEGDLTWMTREEIEKSKLAYNFDHDLPIFFDEKLSEHILDGDRDQTY
1107120..1107965                   hypothetical protein; E6A54_05370                                                    N/A                 LactobacillusjohnsoniiMTLQINTRVDSITWPLNQNLTNQEIISQLELTVTENGYFISNDNLSINKKAVNRSEAGVYPVIITAIGTNNEYATKKIQAWVTDKNNMVDSSPTPQPAPVKTAQYTSSPNKAASPKKKGKKRIVYIVLGVLVLLIAIIFGISACQAHNDTVQNEQAQSNALNNTNSKLDNLSEQNRQLMQQNKELQSAINTYKQDQNKEELQNQLNQIKTENEQLKNNAANNQALQNQIDQLGSTIDQIKQNPNQADSLLDQMKNNQNEFMQNLNATFQKLVSDFQQLIGQ
complement(1108030..1108800)       hypothetical protein; E6A54_05375                                                    N/A                 LactobacillusjohnsoniiMKKRYLLGALGLVLLGLGTSACSSQTNNSGSKQTTTSKSKKSIEKTDENSSESTKRSGKDLSTGADTQANNSNSNDGKAYGGNFQDSKGYIAIGSVTNVTVKSSNDDGHYALVKGIFTNYDKESVDPTSFFSNHLKVMEKVGKATHDLVLVTTDIENELTPWGNQIKEGRKKVEPNMTSNFVIVYKLDPANGAKTNATHYVFEPHDSKFGKSLTVKVYESKTIKKSSDSANSNSNSDESTDTNSSADTSSDADTDD
1109520..1109633                   type I toxin-antitoxin system Fst family toxin; E6A54_05380                          N/A                 LactobacillusjohnsoniiMSLLKEFLTLVVAPILVEIVKSLFDHWLDDRHNNKKQ
complement(1109880..1110110)       PHAGE_Lactob_Lj771_NC_010179: lysin; E6A54_05385; phage(gi163932152)                 2.46e-45            LactobacillusjohnsoniiDVWYSEKGTFVTGGAINLRYGARTSSKIIAQFPVGTEVKYDAYSRHGGYVWIRQPRSNGYGYLVCRAGNEAWGTFK
complement(1110213..1110617)       PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; E6A54_05390; phage(gi971848924)     8.95e-81            LactobacillusjohnsoniiMNLIDLIAKRLSEIFPDMTIYSERQKSGFEVPSFYISKIMTITKSRFFDIQDRTVSYSLTYFANPDRPNADMDEVEQKLLNNFTRLDDYATVRNRETTINQDDETLVMSFDLLLNMYKIENGGKLERIEYSGGI
complement(1110614..1111048)       PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; E6A54_05395; phage(gi971848923)     7.15e-95            LactobacillusjohnsoniiMSLGHVDDAQFQQFASRVRQKIDSGYVKQELGKSSKRIGTQSLRILKANTPVKEGNLRRSWTAEGPSYSGGGWTIKLINNAEYASYVESGHRQQPGRYVPVLKKCLVRDWVPGQFYMKKSIPQIQRQMPQLVTEGLWALKDLFE
complement(1111045..1111407)       PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; E6A54_05400; phage(gi971848922)     3.67e-78            LactobacillusjohnsoniiMNYFNGLKNALPRLWNDRVRIVGTQPVKKGYITNNEDVTIVEDEPAKVILKGQSPSEQSFFGTDEYDAKLIIRNGIKIPAGADIYVTDINGQETKYKRASKGYSGYFSHQEVAMVRSEKA
complement(1111404..1111796)       PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; E6A54_05405; phage(gi971848921)     6.16e-82            LactobacillusjohnsoniiMDKYPHFDEIKKNLADFLPNTDDMPNYDSVLEFTLDKVISDISIYTNIPILELPETLEPTILGLAVQTIDTHQWLVPKDQQVGNVQSLSEGDTSVSFRSPSDIYSALQATNTITDNYVLLLNNFRKLPAE
complement(1111805..1111984)       PHAGE_Lactob_jlb1_NC_024206: putative major capsid protein; E6A54_05410; phage(gi971848920)     1.84e-23            LactobacillusjohnsoniiMAEKDADSDSDSVGRKKTEEKDAKPNANNTVEEIKAYLDKAGIDYTGKTKKDELLALVK
1112368..1113591                   PROPHAGE_Escher_CFT073: transposase; E6A54_05415; phage(gi26248352)                  1.13e-12            LactobacillusjohnsoniiMDLLKTVFGIDVSSRKSNVCIMVNGQKVDDYAISNDMVGFNQLLDDLKQVTKPQIIFEATGVYSRRLQAFLDMHKLRYVMMNPLEAKRKTKDDLHQNKTDKLDALYLAKLQSEHPQRLAYVQSKEYQELMANNRIYEQASHDLITNRNRLHKAIQLTFPEIEHLMVNPRGKNYWSIVLRFPHPDIVLETKEADIIDFLKGLSGIGKKRANDIMQSLIRLAKVACPAVKKDSAHIRGLEMAINNILSAEEACQTALKEMTKLAPKRDLEILTSIPGIGENTALRIISELGDIRRFNNPSQLNAFVGVDPQVYESGNLTAHLSISKRGTAIGRKVLYLAINQIQSAKKAGNPSHIADYYEKRKRSSETASHKKAAIASIHKLLRTIFALIKNDQLYSYDVAKHNQRLLS
complement(1113934..1114281)       PHAGE_Lactob_Lj928_NC_005354: putative major head protein; E6A54_05420; phage(gi41179318)     1.19e-08            LactobacillusjohnsoniiMAKDDYFVLVYKLLTILYTTLKNGKVVTDSELKELSEGLPLDYWEYILKSLSEDGYITGVKPISSLSRNSIKITTLQITPKGIEYLQDNSKMKKAKEVLKNIPQWIALITKFTIK
complement(1114372..1114563)       hypothetical protein; E6A54_05425                                                    N/A                 LactobacillusjohnsoniiMRKDEIKKYVEKQIKIPGTDAVGLTEFEKTFSKEEWNYYMDLLRDVSERYAKGEIDIPEPLVG
1115119..1115130                   attR                                                                                 N/A                 TTATTTTTGCTA
complement(1115193..1115918)       PHAGE_Lactob_jlb1_NC_024206: putative minor head protein; E6A54_05430; phage(gi971848916)     3.99e-159           LactobacillusjohnsoniiEYYKSRIFRLQQLHEQMVEFSKKYGMAEQLRMQKGLAKQYQNSYYLDAYNKYRAIGQLDIKLNHFNEQQLENIVYRPWKGSDFSKRIWKEYTEVLPDELTDALLRGTLFGYSPSKVVRMMRDRFQKVSERDLHKLVITEMWHAAEEATAQFYKDIDIEQYQYLATLESHTCDQCAHLDERIFNVKDKKEGINYPLIHPYCRCTTVPYDKDLPDIETRWSRDPKTGKGTYVRDMSYSEWLKTV
1115912..1116115                   PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; E6A54_05435; phage(gi971848890)     1.02e-37            LactobacillusjohnsoniiSIQDGATYDDIVKKYGEPDSLNESLLFGTKTVTGLWYTGIKGKADVAFASLTFENGALISKTQTDLK
1116329..1117429                   PHAGE_Lactob_jlb1_NC_024206: putative integrase; E6A54_05440; phage(gi971848889)     0.0                 LactobacillusjohnsoniiMAVYKDKKTKTWFVKRSWYDAHKKRHYITRRGFKTKREAEKVNVKLAAQVNDGIDVTRDPVFADYYNEWVKTYKENSVAPNTLRQYILASTHLQHYFGQTTIKSINRSKYQQFINWFGKNHAKSTVVKTNRFYKSCVSSAIEDGIITRNFTDHITLAYNNDKAFKVTYLQADDITRLFNYLYDHRRPQYTTSYMLMLMIVTGLRESEVAGLTWNNIYFSENLIKVEKSWVYSQKDYGPTKNETSQRIVSVPQIMMDCIKELKGNHKAKVFWYPSYKIFPGHKSLGAGLQIALKNLNISAPGFHPHSLRHSQVALLLQANIPIYDIAKRLGHSTTRTTEQTYAYEFKKHRDLMNQKINDALDKSLKK
complement(1117915..1118793)       PHAGE_Bacill_Blastoid_NC_022773: exonuclease; E6A54_05445; phage(gi568192116)        1.67e-11            LactobacillusjohnsoniiMIVITLSKTPASLRGDLTKWCQEIQTGIYVGSVNAKVRDLLWERVQKNIGQGEATLVYNTNNELGYTFRTTRLDRKIVDFDGIPLLKHVNVTPNLKLGFSNAAKYHKAKVCSRSVLHNSTLLKFAVIDIETTGLAPNKSEILSIGAVKYLKNGKVDVFYKLIRDVNCIPADVSELTGLNMKILKSKGSNLIEVLKMLKDFLGDRILLGYNLAFDISFLDIAYKRNKISGLINTSKDLLPIIKKNNKFLDNYKLSTVLSEYKIENQNPHHADFDAKCTYQLALKLINEGKLKL
1127926..1127937                   attR                                                                                 N/A                 TTATTTTTGCTA
