gi|00000000|ref|CP039465.1|  Salmonella enterica subsp. enterica serovar Bareilly str. 4726540, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1999072..2001123                   PROPHAGE_Escher_MG1655: protease II; E3387_09615; phage(gi16129798)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2001160..2001858)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; E3387_09620; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2001882..2002538)       carbon-nitrogen hydrolase family protein; E3387_09625                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2002646..2002876)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; E3387_09630; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2003014..2003388                   CopC domain-containing protein YobA; E3387_09635                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2003389..2004264                   copper homeostasis membrane protein CopD; E3387_09640                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPLKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVFVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2004281..2004634                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; E3387_09645; phage(gi971764937)     1.16e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDPSNS
2005003..2005062                   attL                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2005008..2005375)       integrase; E3387_09650                                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKIAFPLSLTLQAPGLRPGRLSIAADWAEPISSVPESGKIARPGIFTRMGQRNLKPEKFQTLNVVITHRHFTRSVACSGGCTKTNAARNSLKNSWATPQRTPRNSISMNAIIKLTCSGA
complement(2005449..2005747)       PHAGE_Entero_HK97_NC_002167: integrase; E3387_09655; phage(gi9634162)                1.72e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRAG
complement(2005921..2006415)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; E3387_09660; phage(gi985761253)     3.75e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2006605..2006835                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; E3387_09665; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2006889..2007422                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; E3387_09670; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2007679..2007846)       lytic enzyme; E3387_09675                                                            N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2007911..2008099)       hypothetical protein; E3387_09680                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKCEQLSTTTT
2008154..2008645                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; E3387_09685; phage(gi169257184)     2.29e-109           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MDDELKNLKCNICQLAAITGLHRQTFVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRLWLEKEMKQVVPLSEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQETADDDGE
2008632..2009199                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; E3387_09690; phage(gi169257185)     2.40e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGTKQFMFVPRGTNTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFVWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPASDGKHGGVT
2009198..2010429                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; E3387_09695; phage(gi169257204)     6.15e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MGEVQTKAPLDSPALTGTPTAPMPETTAAGIEIATAAFVVAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYIGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITLHFSLEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWTQTVMRKCC
complement(2011347..2011547)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; E3387_09700; phage(gi169257211)     7.99e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPIPEDWFKMCRGY
complement(2011738..2011854)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; E3387_09705; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
2012117..2012242                   arsenic transporter; E3387_09710                                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2012371..2012637                   hypothetical protein; E3387_09715                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCLGDGGSTKECAEVCSLAAGLGPLGFLICF
2012917..2013063                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3387_09720; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118IGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2013390..2014004)       disulfide bond formation protein B; E3387_09725                                      N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(2014014..2014172)       hypothetical protein; E3387_09730                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2014305..2015219)       EamA family transporter; E3387_09735                                                 N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2015837..2016037                   hypothetical protein; E3387_09740                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
2016509..2016568                   attR                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2016514..2016882)       PHAGE_Entero_HK022_NC_002166: integrase; E3387_09745; phage(gi9634144)               3.49e-24            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSESTTKLYLDERDNKAYVML

#### region 2 ####
complement(2842051..2842200)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3387_13980; phage(gi100036)            5.94e-13            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118SQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
2842590..2844080                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; E3387_13985; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
2844846..2844857                   attL                                                                                 N/A                 AACTGAATATTA
complement(2844910..2845491)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; E3387_13990; phage(gi169257321)     4.08e-134           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(2845491..2847986)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; E3387_13995; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2848040..2848282)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3387_14000; phage(gi169257215)     6.57e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2848321..2851683)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; E3387_14005; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
complement(2851745..2852392)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; E3387_14010; phage(gi169257217)     1.19e-153           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2852290..2853027)       PHAGE_Entero_mEp460_NC_019716: tail fiber component; E3387_14015; phage(gi428782332)     1.85e-154           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
complement(2853034..2853732)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; E3387_14020; phage(gi169257219)     1.07e-170           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2853742..2854071)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; E3387_14025; phage(gi169257220)     3.65e-76            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
complement(2854074..2857169)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; E3387_14030; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2857141..2857479)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; E3387_14035; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2857476..2857871)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; E3387_14040; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2857922..2858668)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; E3387_14045; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2858676..2859077)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; E3387_14050; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
complement(2859074..2859652)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; E3387_14055; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
2859761..2860891                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; E3387_14060; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFESASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKARLKVARLHAKIADCRLDALHKASRKLINDNQVVCVESLKVKNMLRNPSLSKAIADASWGELVRQLQYKGEWAGRSVVAIDQFFPSSKRCSCCGFTMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2860924..2861307)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; E3387_14065; phage(gi169257228)     2.60e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFDCSPP
complement(2861318..2861677)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; E3387_14070; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2861735..2862763)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; E3387_14075; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2862818..2863165)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; E3387_14080; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2863178..2864674)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; E3387_14085; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILVCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRMLALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLYDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPDPVSGGKGHSNDTETTLLMSIPGTSAT
complement(2864664..2866244)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; E3387_14090; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQEAVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRTAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2866241..2866444)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; E3387_14095; phage(gi169257234)     8.67e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTTTSVGELKKYVAELEASLCNGRRRAPVGVRL
complement(2866428..2868359)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; E3387_14100; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHLEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAQGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVAAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2868331..2868876)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; E3387_14105; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2869162..2869563                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3387_14110; phage(gi169257237)     1.76e-92            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
complement(2869799..2870251)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; E3387_14115; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2870269..2870721)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; E3387_14120; phage(gi169257239)     1.32e-102           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMRISEKGITLIKEFEGCSLTAYPDSGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2870705..2871034)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; E3387_14125; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2871310..2871996                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; E3387_14130; phage(gi169257241)     1.74e-166           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MPAGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2872357..2872806                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3387_14135; phage(gi169257293)     1.83e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2872942..2873067)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3387_14140; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2873466..2874263)       PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; E3387_14145; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWWYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2874253..2874399)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3387_14150; phage(gi169257245)     3.11e-12            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2874396..2874623)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; E3387_14155; phage(gi169257246)                 6.95e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKMTWFQHPVCTTEEADELAAGYRRRAALVERYGEAAVLALENNNTPHRWTVEELKEVRLAALADLRALKKLEAA
complement(2874620..2875219)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3387_14160; phage(gi169257248)     4.32e-69            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTGHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2875283..2875588)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; E3387_14165; phage(gi423262436)     5.02e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMIISSLLYIHGENEGALKMLKFVIYGDTVKKLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDSLINELTIRAGYHE
complement(2875808..2876299)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; E3387_14170; phage(gi209427795)     1.58e-28            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MVPWREPGQVYSDIRRSYPERFSNAERLARQLNRTWNMPAPPASLTFSESQNARYHFNTQPANIRDLLPVRINFCSFQVEAGSFACSEEHLTCPITLDIPTNGVFVKVSSQSDICCLFDKEAFLNLVCQGLEHPLSREPICMGMIVRKSECFFNTERDKFTLK
complement(2876203..2876406)       hypothetical protein; E3387_14175                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MQPDLLMARLGRLKYRCNYVMHYTWYVIAPTKEHLRWFHGVSRGRFIVIFAGVIQKGLAMQKGWHAN
complement(2876729..2877124)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3387_14180; phage(gi169257253)     1.44e-05            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSRNYTPAQKAEIQKRLTELVRTHGRMTFGELRKITGLTIFTARHYLEKAESCGDLYQAGRSGIFPSEQAFLLWKQKREDARITRFLKTPEGVVRSYDRTRNVICTECRNSVTMQRVLAFYRGNYREAKSE
complement(2877142..2877894)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; E3387_14185; phage(gi169257254)     1.06e-97            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKNIADSGILARIRKLAPQSSERAAPFRTPEEWREWQLAEGRRSCEEIDRQNRQARAEKIFGRAGIQRLHRGCSFANYRIQNDGQRHALSQAKSIAGELDTGCTNFVFSGNPGTGKNHLAAAIGNRLMNAGRSVIVITVADVMSALHASYDDGKSGEKFLRELCGVDLLILDEVGVQRETRNEQVTLNQIIDRRTASLRSVGMLTNLNHEALSKLAGQRVMDRMTMNGGRWVNFDWGSWRPNVSYLRAVK
2878155..2878385                   hypothetical protein; E3387_14190                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MQIFSDWRLPASDIPARPVQTPPDNSRLVHRFFSAMNQERLVLVLALALALESQRQFETLQEPFRNRLIYPVQTLI
complement(2878809..2879303)       hypothetical protein; E3387_14195                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPQIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAIRKSAPELHKRITAGQSIEYLLSQLLKKPQWPARYFLARRWRILSGSVTRPYMRYRRYVAVIASSTRDMTSE
complement(2879290..2879544)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; E3387_14200; phage(gi428781916)     3.99e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MNKISTYRKQLGLSQRQFATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2879641..2880066                   PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3387_14205; phage(gi428782641)     5.05e-18            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MRKENEKIAASRLNDEIAMRLKGRRQKLGLSQGKLAEICGWTQSRIGNYEAGSRNVGVYDAVVLGEALGISPPELLFGEKDSSQAWLSDQHKKLLELFNQLPSSEQQRMIDLFEVRLKEIDDYVETYLRNRLKNSTQPPEN
2880377..2880565                   hypothetical protein; E3387_14210                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKMQELPVEIQAIAASTLRRKMKINDQRADKEPVEKLAHEVREAFTKLYLPVEVDPSQRGSG
complement(2880510..2880689)       hypothetical protein; E3387_14215                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSDTISPFVFPEKAAHEVVLELIRAGKISYASDASDVFTHMLNHYRAERDRPQQEDKAS
2881120..2881404                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3387_14220; phage(gi169257260)     5.15e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKNQKYCSKRCASHDQMAHEL
2881479..2881814                   hypothetical protein; E3387_14225                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNENGYSINKSITAYADEKTGAWDSSIAAAAMLLKVKDVPRDVIGALKSLSVASDFARAMSEASKEKSLH
2881944..2885123                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; E3387_14230; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETELADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINHGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKQMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIETGRFQCDEEKPQPTGELANEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETNQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENHNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2885086..2886243                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; E3387_14235; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MCAALKRCAYRHKGKIMENTNIITTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKSGKYTVTERVRGWTDEDEIGLFVQVGAIMRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESMLGAAKRHLGDELHDKYRITLDDMKPEYIG
2886286..2886525                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3387_14240; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2886520..2886531                   attR                                                                                 N/A                 AACTGAATATTA
2886566..2886814                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; E3387_14245; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2886859..2888151                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; E3387_14250; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MANASYPTGVENHGGSLRIWFLYKGKRVRENLGVPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWGPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2888346..2889548                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; E3387_14255; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 3 ####
complement(4042028..4044361)       PHAGE_Entero_P4_NC_001609: DNA primase; E3387_19760; phage(gi9627512)                0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMDKTRPATGNAYLTRKGFPALECLTLTAVHKTGGVTFRAGDVVVPLYDNTGALVNLQLINSEGLKRTLKGGQVKGACHVIEGKKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPKLKDKIAQELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALRIKRDADPTFDFCGYLEALPEPDGMYMGNANIIPRQPRLYLYHAYLIYMEAYGYKNTLSLTMFGKGLSAMLKEYGLNYDKRRTNQGMQTNLALREESNADWLPKCDEPAAK
4043113..4043124                   attL                                                                                 N/A                 GAAAGCCAATCA
complement(4044376..4044696)       PHAGE_Entero_P4_NC_001609: hypothetical protein; E3387_19765; phage(gi9627513)       3.51e-66            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKKPLPPVLRAALYRRAVACAWLTLCERQHRYPQLTLDTLESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITAPVLH
complement(4044693..4044920)       hypothetical protein; E3387_19770                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MRHTTITARDLECLEHMRNVGQLVGDLMQVQDCATVRRDPEQQLQLTSVIYLMTAQLDGVVERCNQQWLTGEGNV
complement(4044917..4045468)       PHAGE_Entero_P4_NC_001609: putative CI repressor; E3387_19775; phage(gi9627516)      1.09e-47            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMMTVQQTAPFSGLLLFIVSRYSFPAVAKSAAGRRNPSYFKATPDAPCVFFYVVAQAHPFFGLWCLYLSPCQIMVVRAGQPSGWPVSLKAGIPTPVRVTTHERRNSGGGIYRYFKEVAPMATTLTPSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLIRDYVLSFAGRLPVAEVRA
complement(4045401..4045731)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; E3387_19780; phage(gi9627517)     2.40e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDAPSSKQPLFLACFFSSFPGIG
4045689..4045810                   ABC transporter permease; E3387_19785                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118ARQGRKTGKKKRCASGYLTKSIQCRSCPSGFGLLIMSIFTT
4046249..4046986                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; E3387_19790; phage(gi9627518)     3.12e-110           SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTQTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYTEPEKVVMQQVKDRLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEYGVAATPGQRKVWQEKMREREADLKARGLLS
4046983..4047228                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; E3387_19795; phage(gi431810990)     2.44e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH
4047245..4047811                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; E3387_19800; phage(gi9627520)     1.23e-71            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MTTLTLQQACDACQTNKTAWLNRKSELAAAMQEYQELLLDDNASGSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGDEINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLAAQ
complement(4047775..4047960)       hypothetical protein; E3387_19805                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MQVQRWSQAAPRLALVWHAGARKRMQNHAPYGCMAYFVKNSGIYGDFLTGYCAASPARRRV
complement(4048031..4048594)       restriction endonuclease; E3387_19810                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKFELHQDWSNLIALWPQVEEYQRLANKHGINDIFQDNGGKLLQVLLLLSLKVLPGREGNDAVDVTGTEFELKSVNVELTKSFSTHHHMNPTIIAKYRQVPWVFAIYSNITIRSVYLLMPDDLEVFYDKWERQWYERDGKDINNPKIPVKYVIEYGKLLWSNATPEELLWTPEIEEQIDLGGFEAEN
complement(4048591..4048827)       PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3387_19815; phage(gi428782641)     2.31e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MERKINPSRARVIFAHNIRKLRERQGLSQEALADLAGLHRTYIGSVERCERNISIDNIDRIASALGVSPSSLLENNQV
4048883..4049878                   PHAGE_Pectob_CBB_NC_041878: hypothetical protein; E3387_19820; phage(gi100157)       4.61e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MMFDDKKPAYKTDLGAMYIADSLEMLESMPDNSLNLVMTSPPFALQRKKEYGNHDQEQYIDWFLKFGELVFKKLKDDGSFVVDFGGAYMKGVPVRSVYNFRVLIRMIDEVGFHLAEDFYWFNPSKLPSPIEWVNKRKLRVKDSVNTIWWFSKTEWPKSDITKVLVPYSDRMKKLIEDPNKFYSPKMRPSGHDISSSFGKDNGGAIPPNLLQIPNSESNGGYLSGCKKIGVKGHPARFPSKLPEFFINMLTEPGDLVVDIFGGSNTTGSAAEQLKRKWLSFELSPEYVAASVFRFTDKNTSQDILQEMYDTILNGNTLDLRSRENKDQIVVS
4049887..4049898                   attR                                                                                 N/A                 GAAAGCCAATCA
complement(4049932..4051191)       PHAGE_Entero_P4_NC_001609: integrase; E3387_19825; phage(gi9627511)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001118MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDANKIKPISSFDYAKLHS
