gi|00000000|ref|CP039467.1|  Salmonella enterica subsp. enterica serovar Bareilly str. 4726542, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1999079..2001130                   PROPHAGE_Escher_MG1655: protease II; E3390_09610; phage(gi16129798)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2001167..2001865)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; E3390_09615; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2001889..2002545)       carbon-nitrogen hydrolase family protein; E3390_09620                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2002653..2002883)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; E3390_09625; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2003021..2003395                   CopC domain-containing protein YobA; E3390_09630                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2003396..2004271                   copper homeostasis membrane protein CopD; E3390_09635                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPLKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVFVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2004288..2004641                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; E3390_09640; phage(gi971764937)     1.16e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDPSNS
2005010..2005069                   attL                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2005015..2005382)       integrase; E3390_09645                                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKIAFPLSLTLQAPGLRPGRLSIAADWAEPISSVPESGKIARPGIFTRMGQRNLKPEKFQTLNVVITHRHFTRSVACSGGCTKTNAARNSLKNSWATPQRTPRNSISMNAIIKLTCSGA
complement(2005456..2005754)       PHAGE_Entero_HK97_NC_002167: integrase; E3390_09650; phage(gi9634162)                1.72e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRAG
complement(2005928..2006422)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; E3390_09655; phage(gi985761253)     3.75e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2006612..2006842                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; E3390_09660; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2006896..2007429                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; E3390_09665; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2007686..2007853)       lytic enzyme; E3390_09670                                                            N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2007918..2008106)       hypothetical protein; E3390_09675                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKCEQLSTTTT
2008161..2008652                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; E3390_09680; phage(gi169257184)     2.29e-109           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MDDELKNLKCNICQLAAITGLHRQTFVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRLWLEKEMKQVVPLSEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQETADDDGE
2008639..2009206                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; E3390_09685; phage(gi169257185)     2.40e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGTKQFMFVPRGTNTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFVWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPASDGKHGGVT
2009205..2010436                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; E3390_09690; phage(gi169257204)     6.15e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MGEVQTKAPLDSPALTGTPTAPMPETTAAGIEIATAAFVVAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYIGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITLHFSLEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWTQTVMRKCC
complement(2011354..2011554)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; E3390_09695; phage(gi169257211)     7.99e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPIPEDWFKMCRGY
complement(2011745..2011861)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; E3390_09700; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
2012124..2012249                   arsenic transporter; E3390_09705                                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2012378..2012644                   hypothetical protein; E3390_09710                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCLGDGGSTKECAEVCSLAAGLGPLGFLICF
2012924..2013070                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3390_09715; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115IGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2013397..2014011)       disulfide bond formation protein B; E3390_09720                                      N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(2014021..2014179)       hypothetical protein; E3390_09725                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2014312..2015226)       EamA family transporter; E3390_09730                                                 N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2015844..2016044                   hypothetical protein; E3390_09735                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
2016516..2016575                   attR                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2016521..2016889)       PHAGE_Entero_HK022_NC_002166: integrase; E3390_09740; phage(gi9634144)               3.49e-24            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSESTTKLYLDERDNKAYVML

#### region 2 ####
complement(2842057..2842206)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3390_13980; phage(gi100036)            5.94e-13            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115SQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
2842596..2844086                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; E3390_13985; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
2844852..2844863                   attL                                                                                 N/A                 AACTGAATATTA
complement(2844916..2845497)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; E3390_13990; phage(gi169257321)     4.08e-134           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(2845497..2847992)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; E3390_13995; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2848046..2848288)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3390_14000; phage(gi169257215)     6.57e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2848327..2851689)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; E3390_14005; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
complement(2851751..2852398)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; E3390_14010; phage(gi169257217)     1.19e-153           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2852296..2853033)       PHAGE_Entero_mEp460_NC_019716: tail fiber component; E3390_14015; phage(gi428782332)     1.85e-154           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
complement(2853040..2853738)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; E3390_14020; phage(gi169257219)     1.07e-170           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2853748..2854077)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; E3390_14025; phage(gi169257220)     3.65e-76            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
complement(2854080..2857175)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; E3390_14030; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2857147..2857485)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; E3390_14035; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2857482..2857877)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; E3390_14040; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2857928..2858674)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; E3390_14045; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2858682..2859083)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; E3390_14050; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
complement(2859080..2859658)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; E3390_14055; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
2859767..2860897                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; E3390_14060; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFESASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKARLKVARLHAKIADCRLDALHKASRKLINDNQVVCVESLKVKNMLRNPSLSKAIADASWGELVRQLQYKGEWAGRSVVAIDQFFPSSKRCSCCGFTMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2860930..2861313)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; E3390_14065; phage(gi169257228)     2.60e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFDCSPP
complement(2861324..2861683)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; E3390_14070; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2861741..2862769)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; E3390_14075; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2862824..2863171)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; E3390_14080; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2863184..2864680)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; E3390_14085; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILVCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRMLALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLYDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPDPVSGGKGHSNDTETTLLMSIPGTSAT
complement(2864670..2866250)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; E3390_14090; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQEAVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRTAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2866247..2866450)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; E3390_14095; phage(gi169257234)     8.67e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTTTSVGELKKYVAELEASLCNGRRRAPVGVRL
complement(2866434..2868365)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; E3390_14100; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHLEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAQGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVAAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2868337..2868882)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; E3390_14105; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2869168..2869569                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3390_14110; phage(gi169257237)     1.76e-92            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
complement(2869805..2870257)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; E3390_14115; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2870275..2870727)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; E3390_14120; phage(gi169257239)     1.32e-102           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMRISEKGITLIKEFEGCSLTAYPDSGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2870711..2871040)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; E3390_14125; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2871316..2872002                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; E3390_14130; phage(gi169257241)     1.74e-166           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MPAGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2872363..2872812                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3390_14135; phage(gi169257293)     1.83e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2872948..2873073)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3390_14140; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2873472..2874269)       PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; E3390_14145; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWWYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2874259..2874405)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3390_14150; phage(gi169257245)     3.11e-12            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2874402..2874629)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; E3390_14155; phage(gi169257246)                 6.95e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKMTWFQHPVCTTEEADELAAGYRRRAALVERYGEAAVLALENNNTPHRWTVEELKEVRLAALADLRALKKLEAA
complement(2874626..2875225)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3390_14160; phage(gi169257248)     4.32e-69            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTGHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2875289..2875594)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; E3390_14165; phage(gi423262436)     5.02e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMIISSLLYIHGENEGALKMLKFVIYGDTVKKLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDSLINELTIRAGYHE
complement(2875814..2876305)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; E3390_14170; phage(gi209427795)     1.58e-28            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MVPWREPGQVYSDIRRSYPERFSNAERLARQLNRTWNMPAPPASLTFSESQNARYHFNTQPANIRDLLPVRINFCSFQVEAGSFACSEEHLTCPITLDIPTNGVFVKVSSQSDICCLFDKEAFLNLVCQGLEHPLSREPICMGMIVRKSECFFNTERDKFTLK
complement(2876209..2876412)       hypothetical protein; E3390_14175                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MQPDLLMARLGRLKYRCNYVMHYTWYVIAPTKEHLRWFHGVSRGRFIVIFAGVIQKGLAMQKGWHAN
complement(2876735..2877130)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3390_14180; phage(gi169257253)     1.44e-05            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSRNYTPAQKAEIQKRLTELVRTHGRMTFGELRKITGLTIFTARHYLEKAESCGDLYQAGRSGIFPSEQAFLLWKQKREDARITRFLKTPEGVVRSYDRTRNVICTECRNSVTMQRVLAFYRGNYREAKSE
complement(2877148..2877900)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; E3390_14185; phage(gi169257254)     1.06e-97            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKNIADSGILARIRKLAPQSSERAAPFRTPEEWREWQLAEGRRSCEEIDRQNRQARAEKIFGRAGIQRLHRGCSFANYRIQNDGQRHALSQAKSIAGELDTGCTNFVFSGNPGTGKNHLAAAIGNRLMNAGRSVIVITVADVMSALHASYDDGKSGEKFLRELCGVDLLILDEVGVQRETRNEQVTLNQIIDRRTASLRSVGMLTNLNHEALSKLAGQRVMDRMTMNGGRWVNFDWGSWRPNVSYLRAVK
2878161..2878391                   hypothetical protein; E3390_14190                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MQIFSDWRLPASDIPARPVQTPPDNSRLVHRFFSAMNQERLVLVLALALALESQRQFETLQEPFRNRLIYPVQTLI
complement(2878815..2879309)       hypothetical protein; E3390_14195                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPQIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAIRKSAPELHKRITAGQSIEYLLSQLLKKPQWPARYFLARRWRILSGSVTRPYMRYRRYVAVIASSTRDMTSE
complement(2879296..2879550)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; E3390_14200; phage(gi428781916)     3.99e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MNKISTYRKQLGLSQRQFATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2879647..2880072                   PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3390_14205; phage(gi428782641)     5.05e-18            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MRKENEKIAASRLNDEIAMRLKGRRQKLGLSQGKLAEICGWTQSRIGNYEAGSRNVGVYDAVVLGEALGISPPELLFGEKDSSQAWLSDQHKKLLELFNQLPSSEQQRMIDLFEVRLKEIDDYVETYLRNRLKNSTQPPEN
2880383..2880571                   hypothetical protein; E3390_14210                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKMQELPVEIQAIAASTLRRKMKINDQRADKEPVEKLAHEVREAFTKLYLPVEVDPSQRGSG
complement(2880516..2880695)       hypothetical protein; E3390_14215                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSDTISPFVFPEKAAHEVVLELIRAGKISYASDASDVFTHMLNHYRAERDRPQQEDKAS
2881126..2881410                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3390_14220; phage(gi169257260)     5.15e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKNQKYCSKRCASHDQMAHEL
2881485..2881820                   hypothetical protein; E3390_14225                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNENGYSINKSITAYADEKTGAWDSSIAAAAMLLKVKDVPRDVIGALKSLSVASDFARAMSEASKEKSLH
2881950..2885129                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; E3390_14230; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETELADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINHGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKQMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIETGRFQCDEEKPQPTGELANEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETNQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENHNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2885092..2886249                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; E3390_14235; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MCAALKRCAYRHKGKIMENTNIITTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKSGKYTVTERVRGWTDEDEIGLFVQVGAIMRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESMLGAAKRHLGDELHDKYRITLDDMKPEYIG
2886292..2886531                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3390_14240; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2886526..2886537                   attR                                                                                 N/A                 AACTGAATATTA
2886572..2886820                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; E3390_14245; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2886865..2888157                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; E3390_14250; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MANASYPTGVENHGGSLRIWFLYKGKRVRENLGVPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWGPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2888352..2889554                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; E3390_14255; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 3 ####
complement(4042029..4044362)       PHAGE_Entero_P4_NC_001609: DNA primase; E3390_19760; phage(gi9627512)                0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMDKTRPATGNAYLTRKGFPALECLTLTAVHKTGGVTFRAGDVVVPLYDNTGALVNLQLINSEGLKRTLKGGQVKGACHVIEGKKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPKLKDKIAQELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALRIKRDADPTFDFCGYLEALPEPDGMYMGNANIIPRQPRLYLYHAYLIYMEAYGYKNTLSLTMFGKGLSAMLKEYGLNYDKRRTNQGMQTNLALREESNADWLPKCDEPAAK
4043114..4043125                   attL                                                                                 N/A                 GAAAGCCAATCA
complement(4044377..4044697)       PHAGE_Entero_P4_NC_001609: hypothetical protein; E3390_19765; phage(gi9627513)       3.51e-66            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKKPLPPVLRAALYRRAVACAWLTLCERQHRYPQLTLDTLESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITAPVLH
complement(4044694..4044921)       hypothetical protein; E3390_19770                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MRHTTITARDLECLEHMRNVGQLVGDLMQVQDCATVRRDPEQQLQLTSVIYLMTAQLDGVVERCNQQWLTGEGNV
complement(4044918..4045469)       PHAGE_Entero_P4_NC_001609: putative CI repressor; E3390_19775; phage(gi9627516)      1.09e-47            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMMTVQQTAPFSGLLLFIVSRYSFPAVAKSAAGRRNPSYFKATPDAPCVFFYVVAQAHPFFGLWCLYLSPCQIMVVRAGQPSGWPVSLKAGIPTPVRVTTHERRNSGGGIYRYFKEVAPMATTLTPSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLIRDYVLSFAGRLPVAEVRA
complement(4045402..4045732)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; E3390_19780; phage(gi9627517)     2.40e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDAPSSKQPLFLACFFSSFPGIG
4045690..4045811                   ABC transporter permease; E3390_19785                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115ARQGRKTGKKKRCASGYLTKSIQCRSCPSGFGLLIMSIFTT
4046250..4046987                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; E3390_19790; phage(gi9627518)     3.12e-110           SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTQTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYTEPEKVVMQQVKDRLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEYGVAATPGQRKVWQEKMREREADLKARGLLS
4046984..4047229                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; E3390_19795; phage(gi431810990)     2.44e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH
4047246..4047812                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; E3390_19800; phage(gi9627520)     1.23e-71            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MTTLTLQQACDACQTNKTAWLNRKSELAAAMQEYQELLLDDNASGSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGDEINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLAAQ
complement(4047776..4047961)       hypothetical protein; E3390_19805                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MQVQRWSQAAPRLALVWHAGARKRMQNHAPYGCMAYFVKNSGIYGDFLTGYCAASPARRRV
complement(4048032..4048595)       restriction endonuclease; E3390_19810                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKFELHQDWSNLIALWPQVEEYQRLANKHGINDIFQDNGGKLLQVLLLLSLKVLPGREGNDAVDVTGTEFELKSVNVELTKSFSTHHHMNPTIIAKYRQVPWVFAIYSNITIRSVYLLMPDDLEVFYDKWERQWYERDGKDINNPKIPVKYVIEYGKLLWSNATPEELLWTPEIEEQIDLGGFEAEN
complement(4048592..4048828)       PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3390_19815; phage(gi428782641)     2.31e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MERKINPSRARVIFAHNIRKLRERQGLSQEALADLAGLHRTYIGSVERCERNISIDNIDRIASALGVSPSSLLENNQV
4048884..4049879                   PHAGE_Pectob_CBB_NC_041878: hypothetical protein; E3390_19820; phage(gi100157)       4.61e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MMFDDKKPAYKTDLGAMYIADSLEMLESMPDNSLNLVMTSPPFALQRKKEYGNHDQEQYIDWFLKFGELVFKKLKDDGSFVVDFGGAYMKGVPVRSVYNFRVLIRMIDEVGFHLAEDFYWFNPSKLPSPIEWVNKRKLRVKDSVNTIWWFSKTEWPKSDITKVLVPYSDRMKKLIEDPNKFYSPKMRPSGHDISSSFGKDNGGAIPPNLLQIPNSESNGGYLSGCKKIGVKGHPARFPSKLPEFFINMLTEPGDLVVDIFGGSNTTGSAAEQLKRKWLSFELSPEYVAASVFRFTDKNTSQDILQEMYDTILNGNTLDLRSRENKDQIVVS
4049888..4049899                   attR                                                                                 N/A                 GAAAGCCAATCA
complement(4049933..4051192)       PHAGE_Entero_P4_NC_001609: integrase; E3390_19825; phage(gi9627511)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN001115MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDANKIKPISSFDYAKLHS
