gi|00000000|ref|CP039473.1|  Salmonella enterica subsp. enterica serovar Bareilly str. 4726548, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1999080..2001131                   PROPHAGE_Escher_MG1655: protease II; E3396_09615; phage(gi16129798)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2001168..2001866)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; E3396_09620; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2001890..2002546)       carbon-nitrogen hydrolase family protein; E3396_09625                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2002654..2002884)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; E3396_09630; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2003022..2003396                   CopC domain-containing protein YobA; E3396_09635                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2003397..2004272                   copper homeostasis membrane protein CopD; E3396_09640                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPLKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVFVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2004289..2004642                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; E3396_09645; phage(gi971764937)     1.16e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDPSNS
2005011..2005070                   attL                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2005016..2005383)       integrase; E3396_09650                                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKIAFPLSLTLQAPGLRPGRLSIAADWAEPISSVPESGKIARPGIFTRMGQRNLKPEKFQTLNVVITHRHFTRSVACSGGCTKTNAARNSLKNSWATPQRTPRNSISMNAIIKLTCSGA
complement(2005457..2005755)       PHAGE_Entero_HK97_NC_002167: integrase; E3396_09655; phage(gi9634162)                1.72e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRAG
complement(2005929..2006423)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; E3396_09660; phage(gi985761253)     3.75e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2006613..2006843                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; E3396_09665; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2006897..2007430                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; E3396_09670; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2007687..2007854)       lytic enzyme; E3396_09675                                                            N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2007919..2008107)       hypothetical protein; E3396_09680                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKCEQLSTTTT
2008162..2008653                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; E3396_09685; phage(gi169257184)     2.29e-109           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MDDELKNLKCNICQLAAITGLHRQTFVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRLWLEKEMKQVVPLSEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQETADDDGE
2008640..2009207                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; E3396_09690; phage(gi169257185)     2.40e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGTKQFMFVPRGTNTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFVWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPASDGKHGGVT
2009206..2010437                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; E3396_09695; phage(gi169257204)     6.15e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MGEVQTKAPLDSPALTGTPTAPMPETTAAGIEIATAAFVVAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYIGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITLHFSLEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWTQTVMRKCC
complement(2011355..2011555)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; E3396_09700; phage(gi169257211)     7.99e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPIPEDWFKMCRGY
complement(2011746..2011862)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; E3396_09705; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
2012125..2012250                   arsenic transporter; E3396_09710                                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2012379..2012645                   hypothetical protein; E3396_09715                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCLGDGGSTKECAEVCSLAAGLGPLGFLICF
2012925..2013071                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3396_09720; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968IGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2013398..2014012)       disulfide bond formation protein B; E3396_09725                                      N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(2014022..2014180)       hypothetical protein; E3396_09730                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2014313..2015227)       EamA family transporter; E3396_09735                                                 N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2015845..2016045                   hypothetical protein; E3396_09740                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
2016517..2016576                   attR                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2016522..2016890)       PHAGE_Entero_HK022_NC_002166: integrase; E3396_09745; phage(gi9634144)               3.49e-24            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSESTTKLYLDERDNKAYVML

#### region 2 ####
complement(2842063..2842212)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; E3396_13980; phage(gi100036)            5.94e-13            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968SQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
2842602..2844092                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; E3396_13985; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
2844858..2844869                   attL                                                                                 N/A                 AACTGAATATTA
complement(2844922..2845503)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; E3396_13990; phage(gi169257321)     4.08e-134           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(2845503..2847998)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; E3396_13995; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2848052..2848294)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3396_14000; phage(gi169257215)     6.57e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2848333..2851695)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; E3396_14005; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
complement(2851757..2852404)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; E3396_14010; phage(gi169257217)     1.19e-153           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2852302..2853039)       PHAGE_Entero_mEp460_NC_019716: tail fiber component; E3396_14015; phage(gi428782332)     1.85e-154           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
complement(2853046..2853744)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; E3396_14020; phage(gi169257219)     1.07e-170           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2853754..2854083)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; E3396_14025; phage(gi169257220)     3.65e-76            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
complement(2854086..2857181)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; E3396_14030; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2857153..2857491)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; E3396_14035; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2857488..2857883)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; E3396_14040; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2857934..2858680)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; E3396_14045; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2858688..2859089)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; E3396_14050; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
complement(2859086..2859664)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; E3396_14055; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
2859773..2860903                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; E3396_14060; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFESASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKARLKVARLHAKIADCRLDALHKASRKLINDNQVVCVESLKVKNMLRNPSLSKAIADASWGELVRQLQYKGEWAGRSVVAIDQFFPSSKRCSCCGFTMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2860936..2861319)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; E3396_14065; phage(gi169257228)     2.60e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFDCSPP
complement(2861330..2861689)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; E3396_14070; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2861747..2862775)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; E3396_14075; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2862830..2863177)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; E3396_14080; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2863190..2864686)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; E3396_14085; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILVCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRMLALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLYDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPDPVSGGKGHSNDTETTLLMSIPGTSAT
complement(2864676..2866256)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; E3396_14090; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQEAVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRTAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2866253..2866456)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; E3396_14095; phage(gi169257234)     8.67e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTTTSVGELKKYVAELEASLCNGRRRAPVGVRL
complement(2866440..2868371)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; E3396_14100; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHLEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAQGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVAAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2868343..2868888)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; E3396_14105; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2869174..2869575                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3396_14110; phage(gi169257237)     1.76e-92            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
complement(2869811..2870263)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; E3396_14115; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2870281..2870733)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; E3396_14120; phage(gi169257239)     1.32e-102           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMRISEKGITLIKEFEGCSLTAYPDSGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2870717..2871046)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; E3396_14125; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2871322..2872008                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; E3396_14130; phage(gi169257241)     1.74e-166           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MPAGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2872369..2872818                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3396_14135; phage(gi169257293)     1.83e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2872954..2873079)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; E3396_14140; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2873478..2874275)       PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; E3396_14145; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWWYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2874265..2874411)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3396_14150; phage(gi169257245)     3.11e-12            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2874408..2874635)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; E3396_14155; phage(gi169257246)                 6.95e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKMTWFQHPVCTTEEADELAAGYRRRAALVERYGEAAVLALENNNTPHRWTVEELKEVRLAALADLRALKKLEAA
complement(2874632..2875231)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; E3396_14160; phage(gi169257248)     4.32e-69            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTGHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2875295..2875600)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; E3396_14165; phage(gi423262436)     5.02e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMIISSLLYIHGENEGALKMLKFVIYGDTVKKLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDSLINELTIRAGYHE
complement(2875820..2876311)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; E3396_14170; phage(gi209427795)     1.58e-28            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MVPWREPGQVYSDIRRSYPERFSNAERLARQLNRTWNMPAPPASLTFSESQNARYHFNTQPANIRDLLPVRINFCSFQVEAGSFACSEEHLTCPITLDIPTNGVFVKVSSQSDICCLFDKEAFLNLVCQGLEHPLSREPICMGMIVRKSECFFNTERDKFTLK
complement(2876215..2876418)       hypothetical protein; E3396_14175                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MQPDLLMARLGRLKYRCNYVMHYTWYVIAPTKEHLRWFHGVSRGRFIVIFAGVIQKGLAMQKGWHAN
complement(2876741..2877136)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3396_14180; phage(gi169257253)     1.44e-05            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSRNYTPAQKAEIQKRLTELVRTHGRMTFGELRKITGLTIFTARHYLEKAESCGDLYQAGRSGIFPSEQAFLLWKQKREDARITRFLKTPEGVVRSYDRTRNVICTECRNSVTMQRVLAFYRGNYREAKSE
complement(2877154..2877906)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; E3396_14185; phage(gi169257254)     1.06e-97            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKNIADSGILARIRKLAPQSSERAAPFRTPEEWREWQLAEGRRSCEEIDRQNRQARAEKIFGRAGIQRLHRGCSFANYRIQNDGQRHALSQAKSIAGELDTGCTNFVFSGNPGTGKNHLAAAIGNRLMNAGRSVIVITVADVMSALHASYDDGKSGEKFLRELCGVDLLILDEVGVQRETRNEQVTLNQIIDRRTASLRSVGMLTNLNHEALSKLAGQRVMDRMTMNGGRWVNFDWGSWRPNVSYLRAVK
2878167..2878397                   hypothetical protein; E3396_14190                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MQIFSDWRLPASDIPARPVQTPPDNSRLVHRFFSAMNQERLVLVLALALALESQRQFETLQEPFRNRLIYPVQTLI
complement(2878821..2879315)       hypothetical protein; E3396_14195                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPQIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAIRKSAPELHKRITAGQSIEYLLSQLLKKPQWPARYFLARRWRILSGSVTRPYMRYRRYVAVIASSTRDMTSE
complement(2879302..2879556)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; E3396_14200; phage(gi428781916)     3.99e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MNKISTYRKQLGLSQRQFATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2879653..2880078                   PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3396_14205; phage(gi428782641)     5.05e-18            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MRKENEKIAASRLNDEIAMRLKGRRQKLGLSQGKLAEICGWTQSRIGNYEAGSRNVGVYDAVVLGEALGISPPELLFGEKDSSQAWLSDQHKKLLELFNQLPSSEQQRMIDLFEVRLKEIDDYVETYLRNRLKNSTQPPEN
2880389..2880577                   hypothetical protein; E3396_14210                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKMQELPVEIQAIAASTLRRKMKINDQRADKEPVEKLAHEVREAFTKLYLPVEVDPSQRGSG
complement(2880522..2880701)       hypothetical protein; E3396_14215                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSDTISPFVFPEKAAHEVVLELIRAGKISYASDASDVFTHMLNHYRAERDRPQQEDKAS
2881132..2881416                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3396_14220; phage(gi169257260)     5.15e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKNQKYCSKRCASHDQMAHEL
2881491..2881826                   hypothetical protein; E3396_14225                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNENGYSINKSITAYADEKTGAWDSSIAAAAMLLKVKDVPRDVIGALKSLSVASDFARAMSEASKEKSLH
2881956..2885135                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; E3396_14230; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETELADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINHGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKQMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIETGRFQCDEEKPQPTGELANEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETNQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENHNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2885098..2886255                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; E3396_14235; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MCAALKRCAYRHKGKIMENTNIITTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKSGKYTVTERVRGWTDEDEIGLFVQVGAIMRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESMLGAAKRHLGDELHDKYRITLDDMKPEYIG
2886298..2886537                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; E3396_14240; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2886532..2886543                   attR                                                                                 N/A                 AACTGAATATTA
2886578..2886826                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; E3396_14245; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2886871..2888163                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; E3396_14250; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MANASYPTGVENHGGSLRIWFLYKGKRVRENLGVPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWGPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2888358..2889560                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; E3396_14255; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 3 ####
complement(4042040..4044373)       PHAGE_Entero_P4_NC_001609: DNA primase; E3396_19760; phage(gi9627512)                0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMDKTRPATGNAYLTRKGFPALECLTLTAVHKTGGVTFRAGDVVVPLYDNTGALVNLQLINSEGLKRTLKGGQVKGACHVIEGKKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPKLKDKIAQELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALRIKRDADPTFDFCGYLEALPEPDGMYMGNANIIPRQPRLYLYHAYLIYMEAYGYKNTLSLTMFGKGLSAMLKEYGLNYDKRRTNQGMQTNLALREESNADWLPKCDEPAAK
4043125..4043136                   attL                                                                                 N/A                 GAAAGCCAATCA
complement(4044388..4044708)       PHAGE_Entero_P4_NC_001609: hypothetical protein; E3396_19765; phage(gi9627513)       3.51e-66            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKKPLPPVLRAALYRRAVACAWLTLCERQHRYPQLTLDTLESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITAPVLH
complement(4044705..4044932)       hypothetical protein; E3396_19770                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MRHTTITARDLECLEHMRNVGQLVGDLMQVQDCATVRRDPEQQLQLTSVIYLMTAQLDGVVERCNQQWLTGEGNV
complement(4044929..4045480)       PHAGE_Entero_P4_NC_001609: putative CI repressor; E3396_19775; phage(gi9627516)      1.09e-47            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMMTVQQTAPFSGLLLFIVSRYSFPAVAKSAAGRRNPSYFKATPDAPCVFFYVVAQAHPFFGLWCLYLSPCQIMVVRAGQPSGWPVSLKAGIPTPVRVTTHERRNSGGGIYRYFKEVAPMATTLTPSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLIRDYVLSFAGRLPVAEVRA
complement(4045413..4045743)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; E3396_19780; phage(gi9627517)     2.40e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDAPSSKQPLFLACFFSSFPGIG
4045701..4045822                   ABC transporter permease; E3396_19785                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968ARQGRKTGKKKRCASGYLTKSIQCRSCPSGFGLLIMSIFTT
4046261..4046998                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; E3396_19790; phage(gi9627518)     3.12e-110           SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTQTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYTEPEKVVMQQVKDRLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEYGVAATPGQRKVWQEKMREREADLKARGLLS
4046995..4047240                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; E3396_19795; phage(gi431810990)     2.44e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH
4047257..4047823                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; E3396_19800; phage(gi9627520)     1.23e-71            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MTTLTLQQACDACQTNKTAWLNRKSELAAAMQEYQELLLDDNASGSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGDEINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLAAQ
complement(4047787..4047972)       hypothetical protein; E3396_19805                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MQVQRWSQAAPRLALVWHAGARKRMQNHAPYGCMAYFVKNSGIYGDFLTGYCAASPARRRV
complement(4048043..4048606)       restriction endonuclease; E3396_19810                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKFELHQDWSNLIALWPQVEEYQRLANKHGINDIFQDNGGKLLQVLLLLSLKVLPGREGNDAVDVTGTEFELKSVNVELTKSFSTHHHMNPTIIAKYRQVPWVFAIYSNITIRSVYLLMPDDLEVFYDKWERQWYERDGKDINNPKIPVKYVIEYGKLLWSNATPEELLWTPEIEEQIDLGGFEAEN
complement(4048603..4048839)       PHAGE_Entero_mEp213_NC_019720: prophage repressor; E3396_19815; phage(gi428782641)     2.31e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MERKINPSRARVIFAHNIRKLRERQGLSQEALADLAGLHRTYIGSVERCERNISIDNIDRIASALGVSPSSLLENNQV
4048895..4049890                   PHAGE_Pectob_CBB_NC_041878: hypothetical protein; E3396_19820; phage(gi100157)       4.61e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MMFDDKKPAYKTDLGAMYIADSLEMLESMPDNSLNLVMTSPPFALQRKKEYGNHDQEQYIDWFLKFGELVFKKLKDDGSFVVDFGGAYMKGVPVRSVYNFRVLIRMIDEVGFHLAEDFYWFNPSKLPSPIEWVNKRKLRVKDSVNTIWWFSKTEWPKSDITKVLVPYSDRMKKLIEDPNKFYSPKMRPSGHDISSSFGKDNGGAIPPNLLQIPNSESNGGYLSGCKKIGVKGHPARFPSKLPEFFINMLTEPGDLVVDIFGGSNTTGSAAEQLKRKWLSFELSPEYVAASVFRFTDKNTSQDILQEMYDTILNGNTLDLRSRENKDQIVVS
4049899..4049910                   attR                                                                                 N/A                 GAAAGCCAATCA
complement(4049944..4051203)       PHAGE_Entero_P4_NC_001609: integrase; E3396_19825; phage(gi9627511)                  0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000968MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDANKIKPISSFDYAKLHS
