gi|00000000|ref|CP039499.1|  Salmonella enterica subsp. enterica serovar Bareilly str. 4727570, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
2000067..2002118                   PROPHAGE_Escher_MG1655: protease II; AV973_009620; phage(gi16129798)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2002155..2002853)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; AV973_009625; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2002877..2003533)       carbon-nitrogen hydrolase family protein; AV973_009630                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2003641..2003871)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; AV973_009635; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2004009..2004383                   CopC domain-containing protein YobA; AV973_009640                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2004384..2005259                   copper homeostasis membrane protein CopD; AV973_009645                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPLKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVFVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2005276..2005629                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; AV973_009650; phage(gi971764937)     1.16e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDPSNS
2005998..2006057                   attL                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2006003..2006370)       integrase; AV973_009655                                                              N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKIAFPLSLTLQAPGLRPGRLSIAADWAEPISSVPESGKIARPGIFTRMGQRNLKPEKFQTLNVVITHRHFTRSVACSGGCTKTNAARNSLKNSWATPQRTPRNSISMNAIIKLTCSGA
complement(2006444..2006742)       PHAGE_Entero_HK97_NC_002167: integrase; AV973_009660; phage(gi9634162)               1.72e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRAG
complement(2006916..2007410)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AV973_009665; phage(gi985761253)     3.75e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2007600..2007830                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV973_009670; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2007884..2008417                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV973_009675; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2008674..2008841)       lytic enzyme; AV973_009680                                                           N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2008906..2009094)       hypothetical protein; AV973_009685                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKCEQLSTTTT
2009149..2009640                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; AV973_009690; phage(gi169257184)     2.29e-109           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MDDELKNLKCNICQLAAITGLHRQTFVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRLWLEKEMKQVVPLSEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQETADDDGE
2009627..2010194                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV973_009695; phage(gi169257185)     2.40e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGTKQFMFVPRGTNTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFVWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPASDGKHGGVT
2010193..2011424                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; AV973_009700; phage(gi169257204)     6.15e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MGEVQTKAPLDSPALTGTPTAPMPETTAAGIEIATAAFVVAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYIGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITLHFSLEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWTQTVMRKCC
complement(2012342..2012542)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AV973_009705; phage(gi169257211)     7.99e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPIPEDWFKMCRGY
complement(2012733..2012849)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; AV973_009710; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
2013112..2013237                   arsenic transporter; AV973_009715                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2013366..2013632                   hypothetical protein; AV973_009720                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCLGDGGSTKECAEVCSLAAGLGPLGFLICF
2013912..2014058                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; AV973_009725; phage(gi100036)           5.92e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212IGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2014385..2014999)       disulfide bond formation protein B; AV973_009730                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(2015009..2015167)       hypothetical protein; AV973_009735                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2015300..2016214)       EamA family transporter; AV973_009740                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2016832..2017032                   hypothetical protein; AV973_009745                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
2017504..2017563                   attR                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2017509..2017877)       PHAGE_Entero_HK022_NC_002166: integrase; AV973_009750; phage(gi9634144)              3.49e-24            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSESTTKLYLDERDNKAYVML

#### region 2 ####
complement(2843051..2843200)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; AV973_013985; phage(gi100036)           5.94e-13            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212SQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
2843590..2845080                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; AV973_013990; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
2845846..2845857                   attL                                                                                 N/A                 AACTGAATATTA
complement(2845910..2846491)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV973_013995; phage(gi169257321)     4.08e-134           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(2846491..2848986)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV973_014000; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2849040..2849282)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV973_014005; phage(gi169257215)     6.57e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2849321..2852683)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; AV973_014010; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
complement(2852745..2853392)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; AV973_014015; phage(gi169257217)     1.19e-153           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2853290..2854027)       PHAGE_Entero_mEp460_NC_019716: tail fiber component; AV973_014020; phage(gi428782332)     1.85e-154           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
complement(2854034..2854732)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV973_014025; phage(gi169257219)     1.07e-170           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2854742..2855071)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; AV973_014030; phage(gi169257220)     3.65e-76            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
complement(2855074..2858169)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; AV973_014035; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2858141..2858479)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; AV973_014040; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2858476..2858871)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; AV973_014045; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2858922..2859668)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; AV973_014050; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2859676..2860077)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; AV973_014055; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
complement(2860074..2860652)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; AV973_014060; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
2860761..2861891                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; AV973_014065; phage(gi169257226)         0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFESASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKARLKVARLHAKIADCRLDALHKASRKLINDNQVVCVESLKVKNMLRNPSLSKAIADASWGELVRQLQYKGEWAGRSVVAIDQFFPSSKRCSCCGFTMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2861924..2862307)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; AV973_014070; phage(gi169257228)     2.60e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFDCSPP
complement(2862318..2862677)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; AV973_014075; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2862735..2863763)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; AV973_014080; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2863818..2864165)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; AV973_014085; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2864178..2865674)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; AV973_014090; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILVCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRMLALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLYDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPDPVSGGKGHSNDTETTLLMSIPGTSAT
complement(2865664..2867244)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; AV973_014095; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQEAVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRTAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2867241..2867444)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; AV973_014100; phage(gi169257234)     8.67e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTTTSVGELKKYVAELEASLCNGRRRAPVGVRL
complement(2867428..2869359)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; AV973_014105; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHLEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAQGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVAAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2869331..2869876)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; AV973_014110; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2870162..2870563                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV973_014115; phage(gi169257237)     1.76e-92            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
complement(2870799..2871251)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; AV973_014120; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2871269..2871721)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; AV973_014125; phage(gi169257239)     1.32e-102           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMRISEKGITLIKEFEGCSLTAYPDSGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2871705..2872034)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; AV973_014130; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2872310..2872996                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; AV973_014135; phage(gi169257241)     1.74e-166           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MPAGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2873357..2873806                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV973_014140; phage(gi169257293)     1.83e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2873942..2874067)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV973_014145; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2874466..2875263)       PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; AV973_014150; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWWYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2875253..2875399)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; AV973_014155; phage(gi169257245)     3.11e-12            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2875396..2875623)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; AV973_014160; phage(gi169257246)                6.95e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKMTWFQHPVCTTEEADELAAGYRRRAALVERYGEAAVLALENNNTPHRWTVEELKEVRLAALADLRALKKLEAA
complement(2875620..2876219)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; AV973_014165; phage(gi169257248)     4.32e-69            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTGHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2876283..2876588)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV973_014170; phage(gi423262436)     5.02e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMIISSLLYIHGENEGALKMLKFVIYGDTVKKLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDSLINELTIRAGYHE
complement(2876808..2877299)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; AV973_014175; phage(gi209427795)     1.58e-28            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MVPWREPGQVYSDIRRSYPERFSNAERLARQLNRTWNMPAPPASLTFSESQNARYHFNTQPANIRDLLPVRINFCSFQVEAGSFACSEEHLTCPITLDIPTNGVFVKVSSQSDICCLFDKEAFLNLVCQGLEHPLSREPICMGMIVRKSECFFNTERDKFTLK
complement(2877203..2877406)       hypothetical protein; AV973_014180                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MQPDLLMARLGRLKYRCNYVMHYTWYVIAPTKEHLRWFHGVSRGRFIVIFAGVIQKGLAMQKGWHAN
complement(2877729..2878124)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV973_014185; phage(gi169257253)     1.44e-05            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSRNYTPAQKAEIQKRLTELVRTHGRMTFGELRKITGLTIFTARHYLEKAESCGDLYQAGRSGIFPSEQAFLLWKQKREDARITRFLKTPEGVVRSYDRTRNVICTECRNSVTMQRVLAFYRGNYREAKSE
complement(2878142..2878894)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; AV973_014190; phage(gi169257254)     1.06e-97            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKNIADSGILARIRKLAPQSSERAAPFRTPEEWREWQLAEGRRSCEEIDRQNRQARAEKIFGRAGIQRLHRGCSFANYRIQNDGQRHALSQAKSIAGELDTGCTNFVFSGNPGTGKNHLAAAIGNRLMNAGRSVIVITVADVMSALHASYDDGKSGEKFLRELCGVDLLILDEVGVQRETRNEQVTLNQIIDRRTASLRSVGMLTNLNHEALSKLAGQRVMDRMTMNGGRWVNFDWGSWRPNVSYLRAVK
2879155..2879391                   hypothetical protein; AV973_014195                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MQIFSDWRLPASDIPARPVQTPPDNSRLVHRFFSAMNQERLVLVLVLALALALESQRQFETLQEPFRNRLIYPVQTLI
complement(2879815..2880309)       hypothetical protein; AV973_014200                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPQIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAIRKSAPELHKRITAGQSIEYLLSQLLKKPQWPARYFLARRWRILSGSVTRPYMRYRRYVAVIASSTRDMTSE
complement(2880296..2880550)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; AV973_014205; phage(gi428781916)     3.99e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MNKISTYRKQLGLSQRQFATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2880647..2881072                   PHAGE_Entero_mEp213_NC_019720: prophage repressor; AV973_014210; phage(gi428782641)     5.05e-18            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MRKENEKIAASRLNDEIAMRLKGRRQKLGLSQGKLAEICGWTQSRIGNYEAGSRNVGVYDAVVLGEALGISPPELLFGEKDSSQAWLSDQHKKLLELFNQLPSSEQQRMIDLFEVRLKEIDDYVETYLRNRLKNSTQPPEN
2881383..2881571                   hypothetical protein; AV973_014215                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKMQELPVEIQAIAASTLRRKMKINDQRADKEPVEKLAHEVREAFTKLYLPVEVDPSQRGSG
complement(2881516..2881695)       hypothetical protein; AV973_014220                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSDTISPFVFPEKAAHEVVLELIRAGKISYASDASDVFTHMLNHYRAERDRPQQEDKAS
2882126..2882410                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV973_014225; phage(gi169257260)     5.15e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKNQKYCSKRCASHDQMAHEL
2882485..2882820                   hypothetical protein; AV973_014230                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNENGYSINKSITAYADEKTGAWDSSIAAAAMLLKVKDVPRDVIGALKSLSVASDFARAMSEASKEKSLH
2882950..2886129                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; AV973_014235; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETELADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINHGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKQMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIETGRFQCDEEKPQPTGELANEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETNQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENHNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2886092..2887249                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; AV973_014240; phage(gi169257263)                0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MCAALKRCAYRHKGKIMENTNIITTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKSGKYTVTERVRGWTDEDEIGLFVQVGAIMRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESMLGAAKRHLGDELHDKYRITLDDMKPEYIG
2887292..2887531                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV973_014245; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2887526..2887537                   attR                                                                                 N/A                 AACTGAATATTA
2887572..2887820                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; AV973_014250; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2887865..2889157                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; AV973_014255; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MANASYPTGVENHGGSLRIWFLYKGKRVRENLGVPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWGPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2889352..2890554                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AV973_014260; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 3 ####
complement(4043038..4045371)       PHAGE_Entero_P4_NC_001609: DNA primase; AV973_019765; phage(gi9627512)               0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMDKTRPATGNAYLTRKGFPALECLTLTAVHKTGGVTFRAGDVVVPLYDNTGALVNLQLINSEGLKRTLKGGQVKGACHVIEGKKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPKLKDKIAQELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALRIKRDADPTFDFCGYLEALPEPDGMYMGNANIIPRQPRLYLYHAYLIYMEAYGYKNTLSLTMFGKGLSAMLKEYGLNYDKRRTNQGMQTNLALREESNADWLPKCDEPAAK
4044123..4044134                   attL                                                                                 N/A                 GAAAGCCAATCA
complement(4045386..4045706)       PHAGE_Entero_P4_NC_001609: hypothetical protein; AV973_019770; phage(gi9627513)      3.51e-66            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKKPLPPVLRAALYRRAVACAWLTLCERQHRYPQLTLDTLESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITAPVLH
complement(4045703..4045930)       hypothetical protein; AV973_019775                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MRHTTITARDLECLEHMRNVGQLVGDLMQVQDCATVRRDPEQQLQLTSVIYLMTAQLDGVVERCNQQWLTGEGNV
complement(4045927..4046478)       PHAGE_Entero_P4_NC_001609: putative CI repressor; AV973_019780; phage(gi9627516)     1.09e-47            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMMTVQQTAPFSGLLLFIVSRYSFPAVAKSAAGRRNPSYFKATPDAPCVFFYVVAQAHPFFGLWCLYLSPCQIMVVRAGQPSGWPVSLKAGIPTPVRVTTHERRNSGGGIYRYFKEVAPMATTLTPSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLIRDYVLSFAGRLPVAEVRA
complement(4046411..4046741)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; AV973_019785; phage(gi9627517)     2.40e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDAPSSKQPLFLACFFSSFPGIG
4046699..4046817                   ABC transporter permease; AV973_019790                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212ARQGRKTGKKKRCASGYLTKSIQCRSCPSGFGLLIMSITT
4047279..4048016                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; AV973_019795; phage(gi9627518)     3.12e-110           SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTQTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYTEPEKVVMQQVKDRLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEYGVAATPGQRKVWQEKMREREADLKARGLLS
4048013..4048258                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; AV973_019800; phage(gi431810990)     2.44e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH
4048275..4048841                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; AV973_019805; phage(gi9627520)     1.23e-71            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MTTLTLQQACDACQTNKTAWLNRKSELAAAMQEYQELLLDDNASGSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGDEINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLAAQ
complement(4048805..4048990)       hypothetical protein; AV973_019810                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MQVQRWSQAAPRLALVWHAGARKRMQNHAPYGCMAYFVKNSGIYGDFLTGYCAASPARRRV
complement(4049061..4049624)       restriction endonuclease; AV973_019815                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKFELHQDWSNLIALWPQVEEYQRLANKHGINDIFQDNGGKLLQVLLLLSLKVLPGREGNDAVDVTGTEFELKSVNVELTKSFSTHHHMNPTIIAKYRQVPWVFAIYSNITIRSVYLLMPDDLEVFYDKWERQWYERDGKDINNPKIPVKYVIEYGKLLWSNATPEELLWTPEIEEQIDLGGFEAEN
complement(4049621..4049857)       PHAGE_Entero_mEp213_NC_019720: prophage repressor; AV973_019820; phage(gi428782641)     2.31e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MERKINPSRARVIFAHNIRKLRERQGLSQEALADLAGLHRTYIGSVERCERNISIDNIDRIASALGVSPSSLLENNQV
4049913..4050908                   PHAGE_Pectob_CBB_NC_041878: hypothetical protein; AV973_019825; phage(gi100157)      4.61e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MMFDDKKPAYKTDLGAMYIADSLEMLESMPDNSLNLVMTSPPFALQRKKEYGNHDQEQYIDWFLKFGELVFKKLKDDGSFVVDFGGAYMKGVPVRSVYNFRVLIRMIDEVGFHLAEDFYWFNPSKLPSPIEWVNKRKLRVKDSVNTIWWFSKTEWPKSDITKVLVPYSDRMKKLIEDPNKFYSPKMRPSGHDISSSFGKDNGGAIPPNLLQIPNSESNGGYLSGCKKIGVKGHPARFPSKLPEFFINMLTEPGDLVVDIFGGSNTTGSAAEQLKRKWLSFELSPEYVAASVFRFTDKNTSQDILQEMYDTILNGNTLDLRSRENKDQIVVS
4050917..4050928                   attR                                                                                 N/A                 GAAAGCCAATCA
complement(4050962..4052221)       PHAGE_Entero_P4_NC_001609: integrase; AV973_019830; phage(gi9627511)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000212MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIACEWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDANKIKPISSFDYAKLHS
