gi|00000000|ref|CP039500.1|  Salmonella enterica subsp. enterica serovar Bareilly str. 4727567, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
2000068..2002119                   PROPHAGE_Escher_MG1655: protease II; AV979_009620; phage(gi16129798)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWNVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(2002156..2002854)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; AV979_009625; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2002878..2003534)       carbon-nitrogen hydrolase family protein; AV979_009630                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2003642..2003872)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; AV979_009635; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2004010..2004384                   CopC domain-containing protein YobA; AV979_009640                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2004385..2005260                   copper homeostasis membrane protein CopD; AV979_009645                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMLTFVWITLRFIHFASLMLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPLKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVFVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2005277..2005630                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; AV979_009650; phage(gi971764937)     1.16e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAEKLCDPSNS
2005999..2006058                   attL                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2006004..2006371)       integrase; AV979_009655                                                              N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKIAFPLSLTLQAPGLRPGRLSIAADWAEPISSVPESGKIARPGIFTRMGQRNLKPEKFQTLNVVITHRHFTRSVACSGGCTKTNAARNSLKNSWATPQRTPRNSISMNAIIKLTCSGA
complement(2006445..2006743)       PHAGE_Entero_HK97_NC_002167: integrase; AV979_009660; phage(gi9634162)               1.72e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRAG
complement(2006917..2007411)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; AV979_009665; phage(gi985761253)     3.75e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2007601..2007831                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; AV979_009670; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2007885..2008418                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; AV979_009675; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2008675..2008842)       lytic enzyme; AV979_009680                                                           N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2008907..2009095)       hypothetical protein; AV979_009685                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKCEQLSTTTT
2009150..2009641                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; AV979_009690; phage(gi169257184)     2.29e-109           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MDDELKNLKCNICQLAAITGLHRQTFVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGRLWLEKEMKQVVPLSEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQETADDDGE
2009628..2010195                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; AV979_009695; phage(gi169257185)     2.40e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTGNKYGSAAAVRREVAEYLRPPRRMPVAEGTKQFMFVPRGTNTAVPWDDTLASQSFPKQQRPRNVSWFIPANWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFVWSGNHRCEMAAFFAARGPTHDRHSFSLPGRSPSVVLALSTLRRLVPASDGKHGGVT
2010194..2011425                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; AV979_009700; phage(gi169257204)     6.15e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MGEVQTKAPLDSPALTGTPTAPMPETTAAGIEIATAAFVVAKVAQLVGSAPEALDTLQELADALGNDPNFAITVLNKLAGKQPLDETLTALSGKSADGFIEYIGLRETINHAADALHKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGGLPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEYSDGVGLMVLLHLHIFAAIEIPPTLSGQNGRCSTPHIRHRIRIQVRRHGRLMLLRQVTLCRGNRLINLLTRYWLRIRPALSLTCEAGQSKVNPPVGELYFLRRWTATNRTRTPRGRRISTGQKLPHPLITARNRPIPRAIILTSSAVISIHTGEIPITLHFSLEVVRGHRPLATMRIQFISEDTSTPCISVHTDTSLLWTQTVMRKCC
complement(2012343..2012543)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; AV979_009705; phage(gi169257211)     7.99e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPIPQKWCTLWPAGIPIPEDWFKMCRGY
complement(2012734..2012850)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; AV979_009710; phage(gi966201445)     2.93e-06            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MWLAYKNEVKLIDITNTPDNVNWPVPPGGRASHDLKST
2013113..2013238                   arsenic transporter; AV979_009715                                                    N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2013367..2013633                   hypothetical protein; AV979_009720                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCLGDGGSTKECAEVCSLAAGLGPLGFLICF
2013913..2014059                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; AV979_009725; phage(gi100036)           5.92e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211IGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2014386..2015000)       disulfide bond formation protein B; AV979_009730                                     N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
complement(2015010..2015168)       hypothetical protein; AV979_009735                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2015301..2016215)       EamA family transporter; AV979_009740                                                N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2016833..2017033                   hypothetical protein; AV979_009745                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
2017505..2017564                   attR                                                                                 N/A                 CAAAATCAGAGCATCACGTAAGCTTTATTATCGCGTTCATCGAGATAGAGTTTCGTGGTG
complement(2017510..2017878)       PHAGE_Entero_HK022_NC_002166: integrase; AV979_009750; phage(gi9634144)              3.49e-24            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSESTTKLYLDERDNKAYVML

#### region 2 ####
complement(2843049..2843198)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; AV979_013985; phage(gi100036)           5.94e-13            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211SQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
2843588..2845078                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; AV979_013990; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
2845844..2845855                   attL                                                                                 N/A                 AACTGAATATTA
complement(2845908..2846489)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; AV979_013995; phage(gi169257321)     4.08e-134           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(2846489..2848984)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; AV979_014000; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2849038..2849280)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV979_014005; phage(gi169257215)     6.57e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2849319..2852681)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; AV979_014010; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
complement(2852743..2853390)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; AV979_014015; phage(gi169257217)     1.19e-153           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2853288..2854025)       PHAGE_Entero_mEp460_NC_019716: tail fiber component; AV979_014020; phage(gi428782332)     1.85e-154           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
complement(2854032..2854730)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; AV979_014025; phage(gi169257219)     1.07e-170           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2854740..2855069)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; AV979_014030; phage(gi169257220)     3.65e-76            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
complement(2855072..2858167)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; AV979_014035; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2858139..2858477)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; AV979_014040; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2858474..2858869)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; AV979_014045; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2858920..2859666)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; AV979_014050; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2859674..2860075)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; AV979_014055; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
complement(2860072..2860650)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; AV979_014060; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
2860759..2861889                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; AV979_014065; phage(gi169257226)         0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFESASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKARLKVARLHAKIADCRLDALHKASRKLINDNQVVCVESLKVKNMLRNPSLSKAIADASWGELVRQLQYKGEWAGRSVVAIDQFFPSSKRCSCCGFTMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2861922..2862305)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; AV979_014070; phage(gi169257228)     2.60e-85            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFDCSPP
complement(2862316..2862675)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; AV979_014075; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2862733..2863761)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; AV979_014080; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2863816..2864163)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; AV979_014085; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2864176..2865672)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; AV979_014090; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILVCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRMLALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLYDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPDPVSGGKGHSNDTETTLLMSIPGTSAT
complement(2865662..2867242)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; AV979_014095; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQEAVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRTAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2867239..2867442)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; AV979_014100; phage(gi169257234)     8.67e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTTTSVGELKKYVAELEASLCNGRRRAPVGVRL
complement(2867426..2869357)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; AV979_014105; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHLEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAQGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVAAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2869329..2869874)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; AV979_014110; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2870160..2870561                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV979_014115; phage(gi169257237)     1.76e-92            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
complement(2870797..2871249)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; AV979_014120; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2871267..2871719)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; AV979_014125; phage(gi169257239)     1.32e-102           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMRISEKGITLIKEFEGCSLTAYPDSGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2871703..2872032)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; AV979_014130; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2872308..2872994                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; AV979_014135; phage(gi169257241)     1.74e-166           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MPAGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2873355..2873804                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV979_014140; phage(gi169257293)     1.83e-106           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLSENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2873940..2874065)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; AV979_014145; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2874464..2875261)       PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; AV979_014150; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWWYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2875251..2875397)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; AV979_014155; phage(gi169257245)     3.11e-12            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2875394..2875621)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; AV979_014160; phage(gi169257246)                6.95e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKMTWFQHPVCTTEEADELAAGYRRRAALVERYGEAAVLALENNNTPHRWTVEELKEVRLAALADLRALKKLEAA
complement(2875618..2876217)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; AV979_014165; phage(gi169257248)     4.32e-69            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MAHLQLVKQTSSGLLLPATPESGDFLRSVKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPTGGTVTSREQKLISGFVNFLCDSAGQEYTPALNEAAEQYLHNVATLRTGDVALLKSFDAFREWVTVQAGFYTGHFYPDGSRGRRAKSIAFASMDETEFQQVYKAVLNVLWNWILFRKFSSLEEVENVAAHLLEFA
complement(2876281..2876586)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AV979_014170; phage(gi423262436)     5.02e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMIISSLLYIHGENEGALKMLKFVIYGDTVKKLNKTFTCKYAVIRRDDMTVIAEMDFFPDCNRSLMYRDGRYVRFLPLLQNDIMGSDSLINELTIRAGYHE
complement(2876806..2877297)       PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; AV979_014175; phage(gi209427795)     1.58e-28            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MVPWREPGQVYSDIRRSYPERFSNAERLARQLNRTWNMPAPPASLTFSESQNARYHFNTQPANIRDLLPVRINFCSFQVEAGSFACSEEHLTCPITLDIPTNGVFVKVSSQSDICCLFDKEAFLNLVCQGLEHPLSREPICMGMIVRKSECFFNTERDKFTLK
complement(2877201..2877404)       hypothetical protein; AV979_014180                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MQPDLLMARLGRLKYRCNYVMHYTWYVIAPTKEHLRWFHGVSRGRFIVIFAGVIQKGLAMQKGWHAN
complement(2877727..2878122)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV979_014185; phage(gi169257253)     1.44e-05            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSRNYTPAQKAEIQKRLTELVRTHGRMTFGELRKITGLTIFTARHYLEKAESCGDLYQAGRSGIFPSEQAFLLWKQKREDARITRFLKTPEGVVRSYDRTRNVICTECRNSVTMQRVLAFYRGNYREAKSE
complement(2878140..2878892)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; AV979_014190; phage(gi169257254)     1.06e-97            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKNIADSGILARIRKLAPQSSERAAPFRTPEEWREWQLAEGRRSCEEIDRQNRQARAEKIFGRAGIQRLHRGCSFANYRIQNDGQRHALSQAKSIAGELDTGCTNFVFSGNPGTGKNHLAAAIGNRLMNAGRSVIVITVADVMSALHASYDDGKSGEKFLRELCGVDLLILDEVGVQRETRNEQVTLNQIIDRRTASLRSVGMLTNLNHEALSKLAGQRVMDRMTMNGGRWVNFDWGSWRPNVSYLRAVK
2879153..2879389                   hypothetical protein; AV979_014195                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MQIFSDWRLPASDIPARPVQTPPDNSRLVHRFFSAMNQERLVLVLVLALALALESQRQFETLQEPFRNRLIYPVQTLI
complement(2879813..2880307)       hypothetical protein; AV979_014200                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MITPETASQALSSWLAYLQITQETATQLITRAFLEQPARPQIAVHRIERDDGTVDYDAWRRNRINIFQRWRKRETAEHCEKFSALIPAILEAIRKSAPELHKRITAGQSIEYLLSQLLKKPQWPARYFLARRWRILSGSVTRPYMRYRRYVAVIASSTRDMTSE
complement(2880294..2880548)       PHAGE_Entero_mEpX1_NC_019709: prophage antirepressor; AV979_014205; phage(gi428781916)     3.99e-25            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MNKISTYRKQLGLSQRQFATHLGWIQSRLANYEANFRTPGLEECRKIVATLNHLGSRCVLDDVFPPHVNDSRTILAKVNNHDHP
2880645..2881070                   PHAGE_Entero_mEp213_NC_019720: prophage repressor; AV979_014210; phage(gi428782641)     5.05e-18            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MRKENEKIAASRLNDEIAMRLKGRRQKLGLSQGKLAEICGWTQSRIGNYEAGSRNVGVYDAVVLGEALGISPPELLFGEKDSSQAWLSDQHKKLLELFNQLPSSEQQRMIDLFEVRLKEIDDYVETYLRNRLKNSTQPPEN
2881381..2881569                   hypothetical protein; AV979_014215                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKMQELPVEIQAIAASTLRRKMKINDQRADKEPVEKLAHEVREAFTKLYLPVEVDPSQRGSG
complement(2881514..2881693)       hypothetical protein; AV979_014220                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSDTISPFVFPEKAAHEVVLELIRAGKISYASDASDVFTHMLNHYRAERDRPQQEDKAS
2882124..2882408                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV979_014225; phage(gi169257260)     5.15e-11            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MIPVITPRSDWMRSPAKQQTAINRKPGLIRKIYTLLTQKGDPTLINCAYCQKAIPEETAYEYELIYMHGTLISRKNQKYCSKRCASHDQMAHEL
2882483..2882818                   hypothetical protein; AV979_014230                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKNTTPDAAVLQELKELTSRIFKICEQNNMPVVIGYSYELSRNENGYSINKSITAYADEKTGAWDSSIAAAAMLLKVKDVPRDVIGALKSLSVASDFARAMSEASKEKSLH
2882948..2886127                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; AV979_014235; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSIKQEEYSFYYKVKNESARKRLGFKAGFFWCTAKKQSLALSRGELAMDAAGFDEADFARPVRVHFPVENDIPPEGVFDTKFCENREPGGEDGKTLTLIPGAASAVKSDETELADGAGTPAGENGIQESHNPPANPQLTVVATLPFRHRVLAQYIGDGEYLYHVDTGQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINHGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKQMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIETGRFQCDEEKPQPTGELANEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETNQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENHNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMRAIANGFDTGEWPAPITEDYTDELNDFDVRRLEALRVQA
2886090..2887247                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; AV979_014240; phage(gi169257263)                0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MCAALKRCAYRHKGKIMENTNIITTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKSGKYTVTERVRGWTDEDEIGLFVQVGAIMRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESMLGAAKRHLGDELHDKYRITLDDMKPEYIG
2887290..2887529                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; AV979_014245; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2887524..2887535                   attR                                                                                 N/A                 AACTGAATATTA
2887570..2887818                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; AV979_014250; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2887863..2889155                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; AV979_014255; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MANASYPTGVENHGGSLRIWFLYKGKRVRENLGVPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWGPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2889350..2890552                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; AV979_014260; phage(gi100242)     1.40e-49            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 3 ####
complement(4043035..4045368)       PHAGE_Entero_P4_NC_001609: DNA primase; AV979_019765; phage(gi9627512)               0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMDKTRPATGNAYLTRKGFPALECLTLTAVHKTGGVTFRAGDVVVPLYDNTGALVNLQLINSEGLKRTLKGGQVKGACHVIEGKKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPKLKDKIAQELAVIVRQLMQKFSDPMAARTLLQSQQNSDEALRIKRDADPTFDFCGYLEALPEPDGMYMGNANIIPRQPRLYLYHAYLIYMEAYGYKNTLSLTMFGKGLSAMLKEYGLNYDKRRTNQGMQTNLALREESNADWLPKCDEPAAK
4044120..4044131                   attL                                                                                 N/A                 GAAAGCCAATCA
complement(4045383..4045703)       PHAGE_Entero_P4_NC_001609: hypothetical protein; AV979_019770; phage(gi9627513)      3.51e-66            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKKPLPPVLRAALYRRAVACAWLTLCERQHRYPQLTLDTLESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITAPVLH
complement(4045700..4045927)       hypothetical protein; AV979_019775                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MRHTTITARDLECLEHMRNVGQLVGDLMQVQDCATVRRDPEQQLQLTSVIYLMTAQLDGVVERCNQQWLTGEGNV
complement(4045924..4046475)       PHAGE_Entero_P4_NC_001609: putative CI repressor; AV979_019780; phage(gi9627516)     1.09e-47            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMMTVQQTAPFSGLLLFIVSRYSFPAVAKSAAGRRNPSYFKATPDAPCVFFYVVAQAHPFFGLWCLYLSPCQIMVVRAGQPSGWPVSLKAGIPTPVRVTTHERRNSGGGIYRYFKEVAPMATTLTPSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLIRDYVLSFAGRLPVAEVRA
complement(4046408..4046738)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; AV979_019785; phage(gi9627517)     2.40e-41            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDAPSSKQPLFLACFFSSFPGIG
4046696..4046814                   ABC transporter permease; AV979_019790                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211ARQGRKTGKKKRCASGYLTKSIQCRSCPSGFGLLIMSITT
4047276..4048013                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; AV979_019795; phage(gi9627518)     3.12e-110           SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTQTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYTEPEKVVMQQVKDRLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEYGVAATPGQRKVWQEKMREREADLKARGLLS
4048010..4048255                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; AV979_019800; phage(gi431810990)     2.44e-17            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPVAPRRVKGCYSSPFRH
4048272..4048838                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; AV979_019805; phage(gi9627520)     1.23e-71            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MTTLTLQQACDACQTNKTAWLNRKSELAAAMQEYQELLLDDNASGSRRLQTLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGDEINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLAAQ
complement(4048802..4048987)       hypothetical protein; AV979_019810                                                   N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MQVQRWSQAAPRLALVWHAGARKRMQNHAPYGCMAYFVKNSGIYGDFLTGYCAASPARRRV
complement(4049058..4049621)       restriction endonuclease; AV979_019815                                               N/A                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKFELHQDWSNLIALWPQVEEYQRLANKHGINDIFQDNGGKLLQVLLLLSLKVLPGREGNDAVDVTGTEFELKSVNVELTKSFSTHHHMNPTIIAKYRQVPWVFAIYSNITIRSVYLLMPDDLEVFYDKWERQWYERDGKDINNPKIPVKYVIEYGKLLWSNATPEELLWTPEIEEQIDLGGFEAEN
complement(4049618..4049854)       PHAGE_Entero_mEp213_NC_019720: prophage repressor; AV979_019820; phage(gi428782641)     2.31e-10            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MERKINPSRARVIFAHNIRKLRERQGLSQEALADLAGLHRTYIGSVERCERNISIDNIDRIASALGVSPSSLLENNQV
4049910..4050905                   PHAGE_Pectob_CBB_NC_041878: hypothetical protein; AV979_019825; phage(gi100157)      4.61e-21            SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MMFDDKKPAYKTDLGAMYIADSLEMLESMPDNSLNLVMTSPPFALQRKKEYGNHDQEQYIDWFLKFGELVFKKLKDDGSFVVDFGGAYMKGVPVRSVYNFRVLIRMIDEVGFHLAEDFYWFNPSKLPSPIEWVNKRKLRVKDSVNTIWWFSKTEWPKSDITKVLVPYSDRMKKLIEDPNKFYSPKMRPSGHDISSSFGKDNGGAIPPNLLQIPNSESNGGYLSGCKKIGVKGHPARFPSKLPEFFINMLTEPGDLVVDIFGGSNTTGSAAEQLKRKWLSFELSPEYVAASVFRFTDKNTSQDILQEMYDTILNGNTLDLRSRENKDQIVVS
4050914..4050925                   attR                                                                                 N/A                 GAAAGCCAATCA
complement(4050959..4052218)       PHAGE_Entero_P4_NC_001609: integrase; AV979_019830; phage(gi9627511)                 0.0                 SalmonellaentericasubspentericaserovarBareillystrCFSAN000211MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIACEWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDANKIKPISSFDYAKLHS
