gi|00000000|ref|CP039743.1|  Staphylococcus pseudintermedius strain MAD627 chromosome. 2669688, gc%: 37.47%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
637065..637077                     attL                                                                                 N/A                 GCCATTATTAAAA
complement(637687..638703)         PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; EFS97_003200; phage(gi100027)     5.52e-50            StaphylococcuspseudintermediusMASFTVTKRKNKKSSSSNTPLLSQKKTQIRIQNESSSQCSATINTFRRWKCNRNVQRILGLACDKEKKSFKTSILLVTCYKTFRALRKCYVNKHHTNRIPKILKLRKSYRRNCTKSAWLLNAVYDGYLKKDATYNVEVRGTKPSRKEETKFMTIKQYEKLIEYFKTRNEESYIFLFILAITGGRYSDAINMIDIDLNEKEGIIHLRGTKSVNADRFVEVPQKDIKLIKSKLSKLPKRVDGKLFKLSHTAMSKSFNHAKKETGLEDDTITPYALRHTHTSYLLSKGIPIEYISKRLGHYNISITLNTYSHLLDEHKKEQGQRVRELFS
complement(638766..639389)         PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; EFS97_003205; phage(gi100028)     8.14e-17            StaphylococcuspseudintermediusMSEKNELSNEELLRKQEEKFEAYKKEQASKSKKRWLWGCGGCLGVFIILAILFSACTGAFVKEVDKEIKQEGTLKKDKKEEKAQTKKIGETTEIDGVSFTLNSAKYTDERNEFTDVKAEKVLKVDMTIKNNSDKDIPVGGDVKLYLDGKQAKTYPVSNQLLNSLSPGREISGSEGFAVNGNPKKIELEFQPLTSFTNKRYIYEIDVK
complement(639436..639516)         toxin; EFS97_003210                                                                  N/A                 StaphylococcuspseudintermediusKYGLYTHYGDYIIRFDPLTINKQLSD
640026..641312                     PHAGE_Pseudo_phi3_NC_030940: methyltransferase type 11; EFS97_003215; phage(gi100001)     1.22e-33            StaphylococcuspseudintermediusMYRKSPSLMELVVRPDNIEKAIKKVKKNKGAPGIDGMKVSELHAHFAQYFSRITKKLLDGSYQPQAVRKVQIPKPNGKMRVLGIPVARDRVIQQAIRQVIEPGIDRTFSNHSHGFRPHRSTGTALKQCAAYYEEGYKIAVDCDLKQCFDMLNHDKLMYLFERHVQDKSISTFIRRSLQVGAIDLSGEVAERKIGAPQGGVISPLLCNIYLHELDKELEKRGHRFVRYADDFVIFVRTKRAGERVMSSVTKFIEKQLKLVVNEEKSKVGAVTRLKFLSCLITKVNGVCRFRPTTEAKRNLIRTLRKITKRNRPGTFKEIITEINQVTRGWINYFGRGFIRVFLETTQSWLNRRLRQLILKRWKRVRTKYKMLRQYGLDHRSAMKIAQSRKKYWRLSNTHEVHRALTTKQLYKWGLIPLAQLAELAYARY
641656..641805                     PHAGE_Staphy_AJ_2017_NC_048644: hypothetical protein; EFS97_003220; phage(gi100009)     3.80e-05            StaphylococcuspseudintermediusMPMSASTKSLERRALMISIADALMIMLGFGTFTVALIHLVVSIDKKSKK
642210..643514                     PHAGE_Staphy_StB27_NC_019914: minor head protein; EFS97_003225; phage(gi431809708)     8.55e-114           StaphylococcuspseudintermediusMFIQSETLEDAAKVAEIERIVAMMIADIYKTLLAYYGKLATAEGIDWREAKQIADKFDVEAFQMRAKAYVENKDFSDKANKELKRYNTAMYVNREQLLKHELGLIVTKGYAEQENVVNHHLQDSVTRTLKHQAGMLGADVHVKQSDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQQQTVANTKRLLITEAARVQTEAQKMHYLETLGDDAEYEFVAKRDEKTSKICRHYDKKVFKVKDMVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYSVEYDKVLQKSAKDEMTDALDSGRIKVELNPNKQNRHQLGHKLYEDYKKKNLQKGLPIPSYTELDNNELNSFIQQKTGSGRLIASDTGEWRNKEVIDFGKDIGKVNINGKFITTKWGIVHYSKTGTHVIPKKED
643517..643714                     PHAGE_Thermu_OH2_NC_021784: hypothetical protein; EFS97_003230; phage(gi526118332)     6.78e-06            StaphylococcuspseudintermediusMKLWTYVDKNVRVILKNGKEFNGRVSGYDDEVANDNGEDCIYLDVGMELLYEFRESEIKSIEVLD
643898..644482                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; EFS97_003235; phage(gi100005)     6.44e-17            StaphylococcuspseudintermediusMKEQWLKLSLQFFSDAGTEEAVSDENVETEPTQEVEELSESQMKLVNDRVNKELHRRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDYKQQLESYKMRQEAMAMFNEAGMQAPESLLKMVVQDTAEATKEAVDSFVSMVNQEVQRQLESKATQNHVVGNHVTTPNNNKNTPQKVELNSPF
complement(644541..645521)         PHAGE_Staphy_P1105_NC_048636: hypothetical protein; EFS97_003240; phage(gi100027)     2.58e-168           StaphylococcuspseudintermediusMKISKVIKAATATSVALMLFSNPVYAANQITPVSEKKVDDKITLYKTTATADSDKLNISQLLTFNFIKDKSYDKDTLVLKAAGNINSGYKSPNPNDYIYSSFYWGAKYNVSISAESKGAVNVVDYAPKNQNEEFQVQNTLGYSFGGDISISKGLSGGLNGSESFSETINYKQESYRTTIDKHTDNKTIGWGVEAHKIMNAGWGPYGRDSFHDLYGNELFLGGRQSKLNAGQNFLPTSQMPLLARGNFNPEFLSVLSHKPNGAKTSKIKVTYQREMDEYTNYWNGFHWMGTNYKNQNNATFTSFYEIDWDQHTVKLIKTHSDEKNPS
complement(645523..646455)         PHAGE_Staphy_phi7247PVL_NC_048624: DNA adenine methyltransferase; EFS97_003245; phage(gi100041)     4.59e-146           StaphylococcuspseudintermediusMVKNKLLAATLSISLVLPLITPYSEEAKAANTIEEIGEGAQIIKRTEDVSSRKWGVTQNIQFDFVKDPKYNKDALIIKMQGFIKSRTSFTDVKGKGYESTKRMLWPFQYNIALKTNDPNVSLINYLPKNKIESIDVSQTLGYNVGGNFQSAPLLGGKGAFNYSKKISYTQKNYISEVAQQNSKNIRWEVKANSFNTENGQVSAYDRHLFVRSPIGPNARDFFVPNDELPPLIQSGFNPSFIATVSHEKDKGDTSEFEIAYGRNLDITYATFFPRTGIFAERRHNALMNRNLVTKYEVNWKTHEIKVKGHN
650645..650657                     attR                                                                                 N/A                 GCCATTATTAAAA

#### region 2 ####
1108696..1108708                   attL                                                                                 N/A                 TTTTTTAATGTTT
complement(1112493..1113239)       PHAGE_Lactob_LLKu_NC_022989: glycerophosphoryl diesterphosphodiesterase; EFS97_005480; phage(gi564014246)     1.74e-13            StaphylococcuspseudintermediusMTIIFAHRGLSSKAPENTVTAFDLARKVEGVKWLELDLAITKDEQLIIFHDDDLDRTTDTTGEVSETLYEKIEHASSGEWFGPEFKEERVLTFEQLIDFANRYQLNLNIELKGVTGPNGSYLSERMIQLFKEQIKQLDSNIEVLISSFNFALLKLAEQHVPQYTRAVLFERCAFYPDWRTIVDFCGSSIVHLEDINLTRDVVQDIKSSGYTLNVWTVNDKDRANILFNWGVDGIFTDCADDLIHLQKA
complement(1114943..1115140)       PHAGE_Staphy_96_NC_007057: ORF059; EFS97_005485; phage(gi66395937)                   7.27e-21            StaphylococcuspseudintermediusMEKEILEKVKQLLENQTSYKISKETNLPYQTIQDIKNGKTKLLESKFKTVIRLYEYQKQLEQENE
complement(1115481..1115789)       PHAGE_Staphy_StB12_NC_020490: minor head protein; EFS97_005490; phage(gi939535531)     4.24e-21            StaphylococcuspseudintermediusMRFSDRVMLVTKRRKQYDPDTNQYKRETVTHETLVCNINPLSPTRTSLLFGDVYKAINVIRLNTVVDYEPTHALIDGVCYAIKKRVDSRRQTAFYVEEVVLS
complement(1115786..1116109)       PHAGE_Staphy_187_NC_007047: ORF042; EFS97_005495; phage(gi66395254)                  4.20e-27            StaphylococcuspseudintermediusMKTFLDKVKKRIGIEDHLQDKLLCEIITNVVDELKLRLPKEQAFIPQPLYFIVIEVAVKRYNKVGSEGMVSESVEGRSMSYEEDDFKQYDSFINKFFDDGCGEVLFF
complement(1116855..1117076)       PHAGE_Staphy_80_NC_030652: hypothetical protein; EFS97_005500; phage(gi100038)       7.17e-11            StaphylococcuspseudintermediusMMKFNLKFNLQFFADDSASGGGTSSPTEAAKTKVALGETKLKDKHTGIVKTVTDAKSYVTPALITDDAIYMEGR
complement(1117091..1117669)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; EFS97_005505; phage(gi100005)     3.30e-18            StaphylococcuspseudintermediusMKEQWLKLKLQFFNDAGTEEAVSDENVETEPTEVTQEAEELSESQMKLVNERVNEEMARRTKEMRQQIQDELNEKQKEADKLRKMNAEQKHQYELEKAEKERDDYKQQLESYKMRQEAMAMFNEAGMQAPESLLNMVVQDTAEATKEAVDSFVSMVNQEVQRQLESKATQNHVAGNHVEAPKTDEAWKTFLN
complement(1117995..1119545)       PHAGE_Staphy_187_NC_007047: ORF009; EFS97_005510; phage(gi66395224)                  7.20e-141           StaphylococcuspseudintermediusMSNLSDYWLERAKMFIQSETLEDAVKVAEIERIVAMMFADIYKNLLAYYGKLATAEGIDWREAKKIVDAFDVEMFQMQAKVYVENKDFSDKANKELKRYNTAMYANREKLLKHELGLIVTKGYAEQENVVNHHLQNSVTRTLKHQAGILGADVHVKQSDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQQQTVANTKRLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYDKKVFKVKDMVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYRLKDGDTREVDTNSVEEANKPKKHMITESDIDNVEFVSIPGHTEEESHYIQEQHKRLLRKAMTENDSNEFAFISKGKDDDRPLPVKGTQNLVTFGPGSDELELLFNEPKRSLILMHNHPGGSSFSLNDLFTFVKFGSIKTMTIVTNLGQVKHITKTKNYNSERIAEVCSESFKDADEKLFDNLYIENVLKKLYDEDIIEFKVR
complement(1119529..1120863)       PHAGE_Staphy_187_NC_007047: ORF003; EFS97_005515; phage(gi66395218)                  1.20e-103           StaphylococcuspseudintermediusMLTFFNLHRDQQRPRLQELLDYYLTNNRGINKREGRDEPYADYRIAHAFVKNGTDFIRGYIGGNEITFRDEKYNEEIQNINDLNDAHVTNVEILEDCIIYGRAYEIVYRNVDNQDIFKRLDPKNVFVIYSNDIEVEPVAAVRYRSEKINGKDVTLIDFYTADYRAYFYVDDNRLRERADMPQEVNMHQMLQIHEYNANRFRQGVFENVLDLIDAYDYAESDTANYMTDLNDAMLKIEGHLDLKLEEVKKMRKSRIILAKTKADASGRMGNANVDFIYKQYDVAGVEAYKKRIQKDIHKFTNTPDLSDENFGGVQSGEAMKYKLFGLEQLRSTIERQLTKGFKRRFAIIQSVCNQLNDPIDLTHMRIEYKPNIPQSLSEYADIFIKLGGRVSQETLLSWLPNIENPKEELEKVKAEEQEASENHDYHDAMPLQQEKADINDVELE
1121477..1121785                   DUF4870 domain-containing protein; EFS97_005520                                      N/A                 StaphylococcuspseudintermediusMNKSSNKILSSFCYFSVFFAPFIFPIVVWALSNGDTSRNAKRALLYHILPMISLGLSTVLFSIYNNNHSNVMFILAIIFIIAVPFYMLKNLYLGIKVLISEK
complement(1121769..1121948)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: putative single-stranded DNA binding protein; EFS97_005525; phage(gi100050)     7.37e-11            StaphylococcuspseudintermediusMIQYLIIRIIESSGQTYTEATKVRDNQTNTAVEVNNKGKAIKKYEEKNKKSSRLFIFRK
1122599..1123315                   PHAGE_Paenib_Tripp_NC_028930: integrase; EFS97_005530; phage(gi971756990)            4.72e-24            StaphylococcuspseudintermediusMYDRLIHFNPCDGIELKHKDLSEPQKAQYLPKEQIKPFLEMVKKRDIHQYYMFRTMIETGIRVGEANALQWSDYNSKDKTLSITKSYDQKHDRWNTTKNKEHRTIYITNDLAKELTKLKYLQNANRIVNEDIYNQAYDFIFCNAFGEPLPRSTTHNTMMYVTEKLLGKDNKLSIHKLRHTHATLLLESDVPMKVIQERLGHKTMAVTEQVYSHVTEKMNQKAKENFEKYINKKKHFLI
1128454..1128466                   attR                                                                                 N/A                 TTTTTTAATGTTT

#### region 3 ####
1657209..1657220                   attL                                                                                 N/A                 AGCAAAATTAAA
1664377..1664865                   PHAGE_Lactoc_bIL311_NC_002670: Orf17; EFS97_008060; phage(gi13095675)                3.04e-13            StaphylococcuspseudintermediusMIKILTHNDLNQFKQLINDAQLIETNPNHYEVELTPEDIAALFHPDNQARTVLLGAFDADALVGFIQLNYNSQLTKRHKAVIEHLYVVPQYRSEGVAQQLLEVLIPHAKENGIENIFISVASNNIAAKIFYDNFGFEFLALEENARKINGHYIEDHWLIYYT
1664876..1665247                   DUF1722 domain-containing protein; EFS97_008065                                      N/A                 StaphylococcuspseudintermediusMKETTKIQHTWRYQKYNVMMRNYKDYQRIQALIKQGASFKVVDATIQEILIKPIEHPAFMNTFQHLWGYFKKIATPSEKERYTTLLKQLDMQAVAYDKCIQFIQHLTLKYEQPYLLQSAIMKL
complement(1665304..1666527)       PHAGE_Mycoba_Rizal_NC_011272: gp168; EFS97_008070; phage(gi203457498)                1.54e-05            StaphylococcuspseudintermediusMNKRKTSRFTYFIMSVSIIAIFVSGCYLYYQFKHLNEEDPLTIQDRKQQRQAHTAEKSQEIKPLETIVDQQNPVFNTIDRYLESVQFNGTIAVFENGHLKMDKGYGYQDFEKQKKNSPNTVYLIGSAQKFLTGIIVKKLELENKIHVEDSVSTYIPDFQLPQDVTIKDLLMHQSGFYKYQGSDDISDLDGAIKAIEARGIDPKFYHKHFYNDANYLVLAKVIENVTGQSYVQNYYRYIGNPFRLMHTSFFDDERYKEDMAKGYRLDKKTHNVVFREPHYLNQYYGAGNLYMSAHDMGVLVRKLQTNRIFPEKITLPYIHEFMTPRYPEKYRYGFYVYNNFNRINGIFFGQIFTTYYNDKYIIVLGTNYDQPKPNNNEARIKHIYFDILNQHAIINQPGITVPVPKSS
1667318..1667545                   hypothetical protein; EFS97_008075                                                   N/A                 StaphylococcuspseudintermediusMIRFDVNGSDHANPPNFDRIPTPHLHIMTDEYKNGTIAIPLYDIQNIELINEMIDALDFFMDYTKIKKDNIIIKP
1667577..1668353                   PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; EFS97_008080; phage(gi41179221)     1.16e-22            StaphylococcuspseudintermediusMESIEQKMNEYFKWMKQNYKYKKLEDSTEITTPFINPLNDYIRIYLDVLPNNDIRLSDDSLTMNELELAGIDIHTKARSILIQNVLNQFNLVLDGEEIVTNVKNNSFAQSKHNLIQGILKIYDLTLTTKSNVSRLFYEEVFDFLYNEEILGSAKVSVSGESGIKYFIDFILPETKSKPEKLINFANHLDFNKVTTDAFMYRDVKHNRPSRSGLAPQMLIVANDVEHPITAKARQAAEHEHLSILHWSDKDRIKAILTQ
complement(1668458..1668763)       hypothetical protein; EFS97_008085                                                   N/A                 StaphylococcuspseudintermediusMKPENRESGQFIEVLHPDFKEFGMSGKVYDRSDFECIELHVAEYEISDFQVDHLAEDCRLCTYTLIDHTRHIKTNRTSIWKMHEGDWKLLFHQGTVKQDPY
complement(1668855..1669277)       PHAGE_Bacill_Gamma_NC_007458: fosfomycin resistance protein; EFS97_008090; phage(gi77020174)     1.39e-43            StaphylococcuspseudintermediusMIKAINHITYSVSDLRNSIKFYKDILKATLLVEGKHTAYFTLGGVWLALNEEKNISRNEIKQSYTHIAFSISESDFDSWYYWLKCNQVNILKGRERNIKDKQSIYFTDHDGHKIELHTGTLQERLDYYQQEKTHMKFFKH
1669847..1670314                   hypothetical protein; EFS97_008095                                                   N/A                 StaphylococcuspseudintermediusMDIRLTDNDVQKLLVLCKEILTQYNIQLEEKCKGTINITATNSEKSFVLSYFVRPGKASLNFRETEFNICLIRINLNNGFHKNSNNEIIRGNRINIFSEEEYLRKNDGSTYMRAYALPYKIFEDNSDFVNQLFALLEYTKKRHNDNINVETNLFF
1670327..1671118                   PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; EFS97_008100; phage(gi41179221)     3.25e-11            StaphylococcuspseudintermediusMFENEIKSIREEYFNYLKNESKFLPLENESIEFYSPVVDFFGDSISVNISFTGSHYKLTDHGETLWNMEEFGIDLMRHKQQKKYQLLKNIMDSHGLFLENDTLSLYTNRKNLPQAIHDYVLTLSEISHLAILKKENIRSMFKDEVIHYFLKNRNLYPNIFPEFKIEGKSKLTHHFDAVFPGQTTEYVKAIKNININTAKNALFDWDDVEAYRNQTFDANARLNIITDNEDDISDAVATMLSQYNVSVLSFHHKERLVQRFSNV
complement(1671312..1672106)       PHAGE_Strept_315.2_NC_004585: streptococcal superantigen SSA; EFS97_008105; phage(gi28876204)     3.61e-85            StaphylococcuspseudintermediusMNKKRFVISLLFSITILFVISSSTALADHTLDPTPDQLHKSSEFKGLMGNVKYLYDRNFISESNVKSIDSLLAHDLIFCIRESEIKEYGLVKTEFASKELAQKYRNKQVDIFGANYYVDCYFSGKEKGNEEDNGKTCMYGGVTNYEGNHLDNHKSQTIYVKVFENSKHIITFEIQADKKLVTAQELDAKARKFLIDKLNLYEFKGSPYETGYIKFIENDDKSFWYDLMPPPGNNFNQSKYLTMYSDNKTVESKDIKIEVHLTKK
complement(1672720..1673088)       hypothetical protein; EFS97_008110                                                   N/A                 StaphylococcuspseudintermediusMINLSHRDFVKRKIEYVDFRIKSLYEKIIDPEIKNYGKDEIIILNEVYSTLESIELFCFTHEDFERFNEEYVKEAKKIYHIMSRMVRDNDRNTSWIYDEYEEYKKSFDMTIETLELPDKVWE
complement(1673195..1673503)       PHAGE_Paenib_Harrison_NC_028746: head-tail adaptor protein; EFS97_008115; phage(gi971482318)     6.84e-15            StaphylococcuspseudintermediusMAYHFNNKIKIVERVSSGPMPNNYKEKVIAEPWADIKTIRGNEYLGSGLTASEIPVRFIIRYRDGITPKQRIKWKDLDFNIESVQNDNGLNRTLTIYGKAYK
complement(1673661..1675304)       PHAGE_Clostr_phiCD506_NC_028838: putative phage terminase, large subunit; EFS97_008120; phage(gi971819910)     0.0                 StaphylococcuspseudintermediusMANYIKQYYQKIESGDIVASKRVRKQYKKLLDDMEHHDKYIYDESKAERPIAFIERFCRHSKGELAGKPLKLDLFQKAYISALFGFVDKDTGYRRYTESFFFVGRKNGKTTMLSAIALYMMIADGESGSEVYSVASKRDQANILFDQAHEMIVQSPDLNKNIRKRKSDLYFAHNFSKMQSLAKNSNSLDGLNAHLVVIDELHSIQDRNLYEVMKQSQSARTQPLLIMITTAGTHRGTIFDDLYEYACNVVDGKFNDDNFLPIMYELDHKAEYKMPECWQKANPALGVSKKVEDLERKVARAKNNVNDLTGILTKDFNIREVTHSAWLTFEAINNEDTFNIRDFSGSYAIGGADLSITTDLSCATLLFVEPETEMRFVHQMYWLPEDNLRKRVDEDKIPYDKWYEQGLLRLCRGNTIDYSDITEWFLEMLNEYDITPLWIYYDNYSARYWVDEMEANGFKMVRTPQGAKTLSLPMQNMGADLEKHKINYNNNPILKWCLTNTGVETDRNGNIVPVKNQSPKRRIDGTASLLDAYVGLFDNYEQFLRAM
complement(1675297..1675617)       PHAGE_Lactob_PLE2_NC_031036: methyltransferase type 11; EFS97_008125; phage(gi100001)     4.79e-13            StaphylococcuspseudintermediusMKYINLEKLKTYIDKNDIENKHIAYDLLEELTFMKETLDELKRTVREHGATYVFTQGEQSYLKENPAMKSYNTTVTKYNATYKQLLSLLPQRVEKSDAFMDFVTNG
complement(1675755..1676045)       PHAGE_Paenib_PG1_NC_021558: hypothetical protein; EFS97_008130; phage(gi514231252)     6.45e-23            StaphylococcuspseudintermediusMSRSIPASFYRSSKWTKCKNSYMSKQNYICERCGGLASICHHKIYLNAENYKNPYVSLNHDHLEALCQTCHNQEHFGTPAIGEGLQFDKDGNIVKV
complement(1676038..1676319)       PHAGE_Clostr_phiCT19406C_NC_029006: head-tail connector; EFS97_008135; phage(gi971821548)     1.63e-07            StaphylococcuspseudintermediusMIITIEEARNALRIDGDYNDEIIKPLIEAIPNYLYITTGRDWLDEPVQPLAQTTAKFILQLWFDPQTQDSERLKRTIDSLLVSLTALGRDYNE
complement(1676378..1677607)       PHAGE_Clostr_phiCD506_NC_028838: Phage capsid family protein; EFS97_008140; phage(gi971819913)     6.80e-23            StaphylococcuspseudintermediusMFNTVQEAFNHYRNASLEDIETRAGEIRGTIENDPEADVTKLNIEIEGLNQAKENIKEKEQEQVENRSYNPITGQQFKQNNEIQNNNVFGTEEYRSAFFKKMLGQELSDVEQRSFNHAMDIQKSEHRADEFTSSSNASAVIPEQTLNEVIRRARTQGGLLANVRSFNMPTKIRIPISTPQERAEWHTEGAKVEADKVVTTAVSFEANEIIKIFSISVKAKTMSISAFESYLVEELTNCVVEAIEYALINGTGNNQGQGILTGITWNDENSLELTGKYTDFTKALGMLKRGYAQNAKFAMSNATLYNTVYGVQDGNKRPIFVQDAQRENVGYIFGKPVIIDDNIEDGTILLGDFNYIGYNLPQGIMLESSRESSFRSGLIDYRAMAVADTRVLVDDAFVKLTSASSDVGA
complement(1677609..1678175)       PHAGE_Entero_IME_EFm5_NC_028826: prohead protease; EFS97_008145; phage(gi971746945)     1.34e-29            StaphylococcuspseudintermediusMKEIRSAEIQTDSQSGEMVLEGTAIVFNKPTQINTPTGSYTEIIKRNALDGLKLNDTRLLVSHDMNRIPLAKSPKTMDIWTDDVGMHFRATLPDTEEARSVYTAVKRGDLSGMSFGFTVSDGSQYDVNTRTRTITKIDKVLEFSVVNYPAYAEASVEARQQIQEAELKYQARQQALIGLNKLQSKEIK
complement(1678162..1679340)       PHAGE_Clostr_phiCD506_NC_028838: Phage portal protein; EFS97_008150; phage(gi971819911)     1.43e-65            StaphylococcuspseudintermediusMLGLETIERNTAQQFEMLTGGFKSLSQFSGDAYSNDIYRSAVDTIARHIAKLSGKHVNNTKNFNNYKINRILQNRPNPYMSAYDFLYKVATQYYLFNNAFILVQKDNKGNLRNLYPLTPSSVEYVVDGAGEMYLKFLFNDGEVIHFHLSEIAVLRRHFNSNELLGDNNDAIMNTLQLAHTQNEGMTEAIKNSAQIRGILKYNQALSPSKLKEAKEEFTNNYLSMANNGGVVPLDTSMDYQQLNISDVQVDTSQIKVIKQKIYEYLGINEAIVTGSYDENTWQAFFESVIEPFAIQLSSELTEKIFTEREQSFSNRIIFESSKLQYASNQSKSTIIKELLPLGLLTINEARDLMNLPHVEDGDERIQSLNYIEKTLAKNYQMADKEVKTDEGN
complement(1679475..1679816)       PHAGE_Staphy_PT1028_NC_007045: ORF013; EFS97_008155; phage(gi66395177)               6.90e-13            StaphylococcuspseudintermediusMNKHKLKKEILNYIKNHKETSFVEIERIFEENKFDYKGNGAYTSGENDNVIFWVGWNERAFDIVAGLKRDGYIEMNICPPMYYLIDGKSLNLPIVKSKNIKTDHWLPVAFTAV
complement(1680201..1682569)       PHAGE_Bacill_BM5_NC_029069: hypothetical protein; EFS97_008160; phage(gi985757876)     8.35e-32            StaphylococcuspseudintermediusMAIKEKAKIIEVNALEIPEELKELPNWVLWRAELDNKRNEYKKVPYSFAGYRASSTNDDSWTVFDPIYKTYEQQNKYNGIGFVLSEKDDYVVLDIDNAIDDNGQLITDLANDIVQITYCEISPSGTGVHCFFKGQLPSNRKKKRTDLNIELYDKSRFMTVTGESIGQSEISEDQSILDNLVERYFKQESSHEITTIYEPNNENQLSDDDVIKIMLHSKQNKKLMIYVNMKVILKALVKQYKVYCIIPFIQVKTASRWNAFSITTTQINGILHVVVAHGGNSLKRLLQIKMKHIKKEMILKSVTKKVEKCMNSEVMNVYTWKNFGKRVRKAENQQLALIDALIFKKTNLFYLTLKKIQNPCIELKKAFTHKMFLILNELFRGNLNLTATKLTKSSITRIESIKVKRIRPIYLLKMVCLIVKQNNNLLHLNMCLPLKLIQLIKHKVGCLRVGVSTIGLMKLVMIMVLLSCFGKSLMILMVIILAKKPYFLVMATMVKGHFKNYHSLLVLKILQAKTNLMKDLNVCKEKPLLVMMCQVFIMILQISKVLLVIQFLLNLRISLYIEPHSNARFNQQMACLALKIRLQEREDCFRLMQISMGNLRISIKSSMLKIKKYSMCFTDQSIWILTLLIFLRHQIICTFTNRITTLFTILKLMFLMNGLLKLYPKKLFIINIKNFARIVAIQECYQIENSTRVLRGISEKNGIQMIEVDFQVMTSAIMKRATLIKLLYQISNVGFIGMKTKSCGA
complement(1682663..1682965)       PHAGE_Staphy_PT1028_NC_007045: ORF016; EFS97_008165; phage(gi66395180)               8.49e-24            StaphylococcuspseudintermediusMNWEIRNLFEDIERVKEKFDDVSTSFCWFEDDYFVHEPNHVLSMDEVKTHGYKYHEHRIQIAQLHDLMRMYIQQLDEKIREFKELEKASSAKFGDRTDNA
complement(1682969..1683385)       hypothetical protein; EFS97_008170                                                   N/A                 StaphylococcuspseudintermediusMKNIKTFKEKLGKEVMTLLYSDRIHTKNLSKDDREVRDFELIQTIVDARGYTEIGELDILELATDFRRMFKANKEAVEILTTLGSKSTDEYYDIPDEISYFSREDDLNNLYLAKIRIEKLIEAIERNRPEYINFYTEE
complement(1683388..1683591)       pathogenicity island protein; EFS97_008175                                           N/A                 StaphylococcuspseudintermediusMKQQVIITKTIVGWYNIKDTKHNLLLNVSPQVFEQYFPEINNDVQIAVLEMDLSRIAEIKNKKKVGS
complement(1683604..1683822)       PHAGE_Bacill_BceA1_NC_048628: hypothetical protein; EFS97_008180; phage(gi100035)     3.82e-09            StaphylococcuspseudintermediusMTKIHYPVLYITRKEHGHTQNYVARKLNLSPQRYSLKEIGKAYFTLPEARTLSEMYGIPIEQLFSTEFPVAQ
1683968..1684576                   PHAGE_Staphy_PT1028_NC_007045: ORF006; EFS97_008185; phage(gi66395170)               9.23e-05            StaphylococcuspseudintermediusMSEITLGSYLKKIRIENKFTIKALSDMINFSTTYISSVENDKKNNPSLKFLEAYIYGVAETDKDIFTYKKKIKDITAGKYFESNSHSLMDAFMKTNAPNVMILQKNNLTFDKKFDFPVNDIAFHLKDKYNSKYFRKLKVTDDDRTYIHNLINDYFIRKVQIQKREVKHQLENDVIDKSKAIKYINDYDELIAKLNDPNDLQY
1684540..1684551                   attR                                                                                 N/A                 AGCAAAATTAAA
1684588..1685694                   PHAGE_Bacill_phIS3501_NC_019502: phage integrase; EFS97_008190; phage(gi422934298)     5.50e-94            StaphylococcuspseudintermediusMTHDLRLSHNIYKDEKRGTYYFRITYYDKTNKRQYITRKGFKQRKEAVKKCNEIMDELEGAGQLNRLPFDALVEEYTEWYSARRKSSSVKALKTHTNNHLLPYFKSMDVFKITTQDVMKFQNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFYDLKQNVASLVGNFEIESQKRLNYWTLEQFNEFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDVNFDDEFIHINKTDYHGEVTAPKTKSAIRDIYLPAHMMNDIKNYLNWYKENNIYKDDYVLFGTFFKAYSESTIDRWFTTALKVLDNQLPDGQTFPRIVIHELRHSHASMLVNHGASIMVIAQRLGHADSNEVYNRYGHLYPSTQKEIVKFL
complement(1685806..1686163)       tRNA                                                                                 N/A                 GGGGACGTTTATGGATTCGACAGGGGTCCCCCGAGCTCATGAAGCGTGTCGGAGGGTTGTCTTCGTTACCAACACATCAGTTTATAATAACTGGCAAAACTAACAATAATTTCGCAGTAGCTGCCTAATTGCACTCTGCATCACCTAACAGCATCGCCTATGTGCTGTTAACGTGATTCAACTTTAGTAGGATACGCTCGTCACTGCCGTTTGAAGTCTGGCGAGAAGAGATGAATCAAACTAGCATCATGTTGGCTGTCTATCGCCTTGCATGATGTGAAATTGAACGATAGACTACACACGTAGAAACATTTGTATCAGGACCTTTGGACGCGGGTTCAAATCCCGCCGTCTCCAC
complement(1686237..1686701)       PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; EFS97_008200; phage(gi588498309)     2.64e-93            StaphylococcuspseudintermediusMPKKSGKGTLAENRKARHDYNIEDTIEAGIALQGTEIKSIRRGSANLKDSYAQVKHGEIFLHNMHIAPYEEGNRFNHDPLRVRKLLLHKREILKLGERTREIGYSIIPLKLYLKHGNCKVLLGVARGKKKYDKRQSLKEKAVKRDMDRAMKQKY
complement(1686717..1689074)       PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; EFS97_008205; phage(gi115304286)     1.03e-115           StaphylococcuspseudintermediusMNLKEEIIGIIKSADYEPMSVSDFQDALGLSSADSFRDLIKILVELEQTGMVTRTKQDRYQKQQQKTNSGLVRGTLSQNKKGFAFLRPDDQEMEDIFIPPTKINRAMDGDVVLVEVKKSRGDFRKGKFEGEVKAIESHSIKQVVGTFSEARHFGFVVPDDKRIMQDIFVPKGQELGAVEGHKVLVQITQYSDGTNSPEGQISAILGHKNDPGVDILSIIYQHGIEIEFPDDVLKEAENVPETIQPDELKGRRDLRDELTITIDGADAKDLDDAIAVKKLDNGNTELTVSIADVSYYVTEGSALDREAYDRATSVYLVDRVIPMIPHRLSNGICSLNPEVDRLAMSCRMEIDAQGQVVKHEIFESVIHSNARMTYDAVNRIITDKDAVTRAQYPEIVPMLDLAQTLSQQLIAMRKKRGEIDFDIKEAKVIVNEEGIPKEVVTRERGEGERLIESFMLIANETVAEHFNQMEVPFIYRIHEQPKSERLRQFFDFITNFGIMVKGTGEDIHPSTLQNIHEEIAGRPEDMVISTMMLRSMQQARYDADNLGHFGLAADYYTHFTSPIRRYPDLIVHRLVRKYLIEKSMDGRAMHEWEEKLPQIAEHTSNRERRAIDAERDTDELKKAEFMIQHIGDEFEGVISSVANFGMFVELPNTIEGMVNMQNMSDDYYHFDERQMALIGERKAKVYRIGDVVKVKVIHVDVDERQIDFQIVGMPIDVSSKRERDPRGKTIQAKTKGTQFEKTDKKKKRKSRKGKNARQRDKSGNTQHKPFYKGKKVKKKARKKKK
complement(1689129..1689869)       alpha/beta fold hydrolase; EFS97_008210                                              N/A                 StaphylococcuspseudintermediusMKIQLPKPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPHYEGHAAPPEEILQSSPHVWYKDVLDGYEFLVEHGYDEIAVAGLSLGGVFALKLSLNRTVKGIVTMCSPMYIKTEGAMYEGVLDYARQFKKYEGKDDETIEREMAAFHPTDTLRELQGTIQEVRDSVDEVIDPILVIQAEQDEMINPDSANVIYDEVMSDEKRISWYKESGHVITIDKEKEAVFEDVYQFLESLDWSE
complement(1689968..1690201)       preprotein translocase subunit SecG; EFS97_008215                                    N/A                 StaphylococcuspseudintermediusMHSFFVVLLIIDCIALITVVLLQEGKSNGLSGAISGGAEQLFGKQKQRGVDLFLHRLTIVLSIIFFVLMLGISYFNM
complement(1690270..1690737)       hypothetical protein; EFS97_008220                                                   N/A                 StaphylococcuspseudintermediusMPQLQDTELRAQHTGKLLAYLSFLFAVCLVIHQVMIVDGQVVTYMLEHSGNKATENSINAINNSLRYIGILYILANAAGVVALKNQHPYLWWFMLAVFISQIFNALLNPPILYTAIFHVKGFFGLIPYALVIVGSLVLAVMMIRVSVKRKSTFNR
complement(1690874..1692178)       PHAGE_Strept_20617_NC_023503: enolase; EFS97_008225; phage(gi588295080)              0.0                 StaphylococcuspseudintermediusMPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDADRYLGKGVEKAVENVNEIIAPELIEGEFSVLEQVSIDKMMIQLDGTANKGKLGANAILGVSIAVARAAADFLGQPLYKYLGGFNATVLPTPMMNIVNGGSHSDAPIAFQEFMILPVGAESFKEALRWGAEVFHALAKILKKRGLVTAVGDEGGFAPKFEGTEDGVETILEAIKAAGLEAGKDVFLGFDCASSEFYENGVYDYTKFEGENAAKLTAEEQVDYLEQLVNKYPIITIEDGMDENDWEGWKLLTERIGDRVQLVGDDLFVTNTEILSKGIEQGIGNSILIKVNQIGTLTETFEAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDDLYETAKYEGLKSFYNLSK

#### region 4 ####
complement(1961647..1961820)       PROPHAGE_Xantho_33913: ISxac3 transposase; EFS97_009575; phage(gi21231086)           1.71e-06            StaphylococcuspseudintermediusMASFHSIIKKELIHHQDYKTRNEAMFSIMEYILNAKSVHPTLNDMSPIEFEKKYATK
complement(1961833..1962303)       PROPHAGE_Escher_CFT073: transposase insF; EFS97_009580; phage(gi26249410)            4.73e-29            StaphylococcuspseudintermediusMFREVKREGLKKHIYQIYIKSQKRYGSPKITQLLRRHGDTITQRTVSRLMKALGIRSITKKKYKATTHSKHHLPVYPNLLNQKFKVSQPGNVWVANITYGKRTCDISFINKAYTIQEPKEGLIYHSDQGSQYSSIEYQNLLREKGIQSSMSRKGNC
complement(1962322..1962558)       transposase; EFS97_009585                                                            N/A                 StaphylococcuspseudintermediusMPIQTLTRWLSIYRKDGENGFVGSGKRTSKKQAETDLEKRLRDLEEENKILKKAMHIFAKDQKSYTSLSMNTDMNSVS
complement(1962826..1963692)       Cof-type HAD-IIB family hydrolase; EFS97_009590                                      N/A                 StaphylococcuspseudintermediusMVKLIATDMDGTLLNAAHEVSKENVEAIQYAQSQGVTVVIATGRAFYEANDPIIPTGLKVPYICLNGAEVRDESFDIVHTSSLNYGLYQRIRQTLNNENMYYQVYTNFGIYTEDPEKDLAIYLDIAKHSGQKGDVEKIRKHIQHRIDLGTLKVVDNYDKIESVPGELIMKVLAYDKDLAKIERVKKQLSESSNLAVSSSSLGNIEITHIDAQKGLALQAIAEQLGIDMADTMAVGDNLNDKSMLERAGVAVAMENALPELKDIATFVTDSNENSGVAKAIYRALGKEE
complement(1963854..1964327)       PHAGE_Gordon_Cozz_NC_030941: hypothetical protein; EFS97_009595; phage(gi100042)     5.59e-06            StaphylococcuspseudintermediusMTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAMERAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDSRMNHRASVVSGVLAYSCGEILRQFFRALRLYKKRQKN
1964397..1965020                   PHAGE_Entero_IME_EFm5_NC_028826: hypothetical protein; EFS97_009600; phage(gi971746929)     1.03e-18            StaphylococcuspseudintermediusMKKPFIAIEGPIGVGKSSLAHQLSQSYHFYEAKEIVGENPYLSDFYSDISKWSFQTEMFFLCHRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDAEYDKFSRIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQDSYLLKLKEDYANYYHSLKSEGHAVLWVDTTDLDFVQNEADYTYVFNQINELIGGHNHESI
1965007..1965672                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; EFS97_009605; phage(gi100011)     2.24e-33            StaphylococcuspseudintermediusMNQYNIPSNAIITIAGTVGVGKSSLTRAIAEKLNFRTSYENVEHNPYLDKFYHDFKRWSFHLQMYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHVEQGTMTPEDFKTYSNLFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETDPEYWEMLFQRYENWINQFNACPVVRVNINEYDLLSHPESVDVVLKKIGHVIHTYRQVDQRS
complement(1966232..1966930)       HAD family hydrolase; EFS97_009610                                                   N/A                 StaphylococcuspseudintermediusMISPKWILFDKDGTLIHFDDSWTKIGIQLVNDICDHFKLEDRLAVYQAIGIKDERFEVNSVMNGGTLKDLIAVLQQFTNENIADWVAQRSQTLISQRVPEINLYEGVASLMQRLKAQGYALGIVTSDNHTGVTQFLEETQLTDVFDMVISTNDGQYEKPDIRLLQPLWNRGVRGEDVIMVGDTDNDMLTGKNMKSALNVGVRTGLGQEAKFEAADVVIDHVGLLENVLPKAK
1967168..1968160                   PHAGE_Staphy_AJ_2017_NC_048644: capsid decoration protein; EFS97_009615; phage(gi100066)     3.99e-158           StaphylococcuspseudintermediusMKKLKQKKRLTSLLLATTMLLGIMNTGVSHAASDENQAELKLATHNVYMLSGFLYPNWGQSKRADLISKSKYIQDNDVVIFNEAFYPASANQLFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQHIFQHGCGFDNDSNKGFVYTKIEKNGKFVHVIGTHTQSEDTRCSVGQDRAIRAEQMKEISNFVKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDMLKNLNVSDVTYTGHSSTWDPQSNSIAKYNYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDYSDHYPVKAYSKS
