gi|00000000|ref|CP039746.1|  Staphylococcus pseudintermedius strain VTH737 chromosome. 2711099, gc%: 37.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
18870..18881                       attL                                                                                 N/A                 TGGCAAGTTCAT
complement(21333..21920)           PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; DJ458_000095; phage(gi100676)     8.08e-71            StaphylococcuspseudintermediusMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGIAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAKEYGLIDEVMEPEKA
22072..22143                       tRNA                                                                                 N/A                 CCCCTCGTAGTGTAATGGATAACACATAAGATTCCGGTTCTTACAATAGAGGTTCGATTCCTCTCGAGGGGG
complement(22512..23267)           PHAGE_Staphy_P282_NC_048634: hypothetical protein; DJ458_000105; phage(gi100022)     6.93e-162           StaphylococcuspseudintermediusMKTYSEARSRLRWYVGRYIDFDGYWAYQCMDLAVDYIYWLLGIRMWGNAKDAIDNDFKNMATIYENTLSFVPQVGDVAVFRKGIYKQYGHIGIVYNSGNTNQFLILEQNFDGNANTPAKLRWDNYYGCTHFIRPHYKRENTTSKIANKISPPSHSAAGNSASKIISGSRAPYNLKWSKGAYFNAKVDGLGATSATRYGDSRANYRFDVGQAEYVPGTLIYVFEIIDGWCRIYWNNHNEWIWHERLIVKEVF
complement(23280..23534)           PHAGE_Staphy_SA7_NC_048658: tail assembly protein; DJ458_000110; phage(gi100053)     1.12e-46            StaphylococcuspseudintermediusMINWKIRIKQKTFWVAMLSAIFLFAQSIAKVFGYDIQVYTEQLTDTLNSVLGVLVLMGVIQDPTTQGVSDSHQALNYEEPRQKY
complement(23554..25443)           PHAGE_Staphy_187_NC_007047: ORF002; DJ458_000115; phage(gi66395217)                  0.0                 StaphylococcuspseudintermediusMALPKTGKPTAKQVADWAISLIGSGVDVDGYYGRQCWDLPNYIFNRYWGFKTPGNARDMAWYRYPAGFKIYRKTSSFIPKPGDIAIWTGGNYNWNTWGHTGIVVGPSTKDYFYSVDQNWNNANSYVGSPAAKIKHSYFGVTHFVRPAYKSEPKPTPIPPENKPIPKDPEPTKKPESNKPIYKVVTKILFTTARIELVKANRFVHYIIKSDNHNNKPNKIVIKNANTALSTNDIYKYREDLNEDEIPHFFVDRLNVWACRPIEESVQGYNNAIVLSITEARTAVSDNFKMNEIECLSLAKLLLEANGKKMNTSSIVIDKSSWRTFKLHTGKDSLKSSSFTSKDYQKAVNELIKLFNDKDKLLNNKPKDVVEKIRIRTVVKENTKFVPSELKPSNNIKDKQDSKIDRIISNYSLKQALDIQFSLNPKPQTSNGVTWYTASLNQTRAAMDTNKIFNNNVQVYQFLKLNQYQGISVDKLNKLLVGKGTLQNQGQAFADGCKKYNVNEIYLIAHAFLESANGTSFFASGRTGVYNYFGIGAFDNNPNNAMEFARSHGWTSPAKAIIGGAEFVGKGYFDVGQNTLYRMRWNPKKPGTHQYATDISWAKVQAKMISAMYKEIGLKGEYFIYDQYKK
complement(25566..25940)           PHAGE_Staphy_SA7_NC_048658: tail fiber protein; DJ458_000120; phage(gi100052)        3.76e-60            StaphylococcuspseudintermediusMDEIKKIKQEIADLTERVDSIEQTANEAASHVVSLRKEYRNGHQELQESHKELKDKQEKVVNENFEQTKILNRIEERYQTQVEVAQNNEGKTLALNKWLVGAIWALVTIVMIVVITASINALIP
complement(25973..27244)           PHAGE_Staphy_187_NC_007047: ORF006; DJ458_000125; phage(gi66395221)                  0.0                 StaphylococcuspseudintermediusMANQDLFYDITKQGTSQEKQQYLVTRVGDGGLKTVTITVWSNGTPYNLHGLTPVFEGVKPDGEKIIDTRGAIVLDPVNGVFRYTFPHQASTAEGEYRQAFFKLKRGEQTDSTLEVKINVLKNMVEFGINSESYFTEYQQKIAELEEKINTYLEELKTKAAGTEAQVEANATLAKALKQQLDLIQSIANERELLTKGEFNEALNTVNNNVDAISSKIDTLKRETTEELERIKDEVTGVKTGVLDDVANITKSGVYYFNSTTQNVPTRNSNNANGYIEAVMKDANNGMLTMLGSGYAIEKYNGKLHGRWVTSVPVKLWSGKLTKGQIATLNGNCHDFGKLMVEVAYTTNRFAVEWVNIPNNGSTIYMNNIGMRSSDGGYKNGHLDEVVIQIKDDTHILLKETLKATGDEKAVDSDAYISAIYGIY
complement(27261..28304)           PHAGE_Staphy_187_NC_007047: ORF008; DJ458_000130; phage(gi66395223)                  0.0                 StaphylococcuspseudintermediusMKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDSLIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLSDLKGERHTSLKSRLDADLNQIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSVKKIGIIGDSVAKGSKSNKNFGKYLSEKLGATVQNEAVSGATMSTVKANSIYEQASKIRNKDLVIIQGTDDDWLYNGSSGVQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNSLGLDLEAYVNAQVLACSELNVPVYDAYHTDLLDPYNPAFRVKNMVDGLHPNELGHEVITHELLKNYYYFYG
complement(28316..29008)           PHAGE_Staphy_187_NC_007047: ORF019; DJ458_000135; phage(gi66395234)                  1.57e-140           StaphylococcuspseudintermediusMAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKRKLENFNADAIDVATTSKNGLMSAQDKTKLDSLKQFDPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVPKYHVSAHSTTKILHLIPTNSANEFCTKTVIVKDNSITGTVDNHNRATNANKVRLHEILEY
complement(29012..30409)           PHAGE_Staphy_187_NC_007047: ORF004; DJ458_000140; phage(gi66395219)                  0.0                 StaphylococcuspseudintermediusMIKLRNILGEAYFLQVPTELTERISGESQLTFSFSENESNREIVNTISKKWQVTNVGGQNDDKIYTVALVSKESNSLTTRVTVHCKEKQIDDLKAKRIYDNLTGSFTAERFFSTVFKGTGYKYKLDAKVKALKFENAGDGDTVLETFQKGLERYNLEFKYVPKTKTFILTKKVFQKADYFIENGTNALNFKLEEDSSEFYTYIRGYGNFDDNVKFQEASMQLIYKHPLADDIGIYEAPAIIDGRIKDEEFLRNKMINTVDNSLKTSLTLDFITLQEEYAEAVPVVGDLVPVKDDIIDVFDFVRIVEVQTKRDINNKIFEQNATLGDYKKQDRYNSKVSNSVSLANSISGSSTEIREAKDKIKGFVSAANNVLDMGNALRADSKGIKSVNKLLNTVFTPDKGITISNDGGKTFVTALDGDGINVDIVPVATTKKNGLMSKDDKIKLDNLNGVGSNGLGSIFYKEVK
complement(30422..31354)           PHAGE_Staphy_187_NC_007047: ORF010; DJ458_000145; phage(gi66395225)                  0.0                 StaphylococcuspseudintermediusMDIKITKLDGTSYHLEDYKMIVKDVIVESIEMKDDYQDYEGMHGRHLVSSLYHSRKIHVPVFFVADDNLDYAIQRNLLYELVQDEKPFYIQELRRHDKVNYKFKNTLATDYQQVDDHGIPIFDDDNLQVNAKRYLVKLSNVLTPEQKNNIGNVSLEFVTTHLPFAESVETSLDLHKQLINGFWASDDDIDFDDTAKQTYIFNNVKAGQVYYHGTVPNKQFNMYKKVRITIGKATNDFQWSLSGSDLMRVSGVEFKSGDVLEYDGLRITKNGRSVVNESNIALPVFLPGFNEFRFNQNVKKAEFDMRFYSK
complement(31367..34486)           PHAGE_Staphy_187_NC_007047: ORF001; DJ458_000150; phage(gi66395216)                  0.0                 StaphylococcuspseudintermediusMSNKDYTVSADLKANTGKFKKAIKTAIQTLRQYEKTIARIKDVELKADDKLIKEKVKQAELALERIDGKKANATIDASTKIAETKLKNYEKALQILDNKSVKTAIDLQDRLFVSKFNKTKAEINKLDGKTVNTELEVKDSVANNKIRRFKALLRSIPNRRKVRVDVDGKGSKNPFSKMLDYLNKQSDEFVAHMDRIAKSIRTFGTIGANMIQGTLLSSFSALIPIIASLVPAIMAVGNALAVVGGGAIGLAGSFAIAGAGVVGFGAMAISAIKMLEAGTLQASAATYAYKRSLEGVTSEWQKIIRLNADSIFGALSSALNGVQTTLKNLSPFLKGVSEAVNNSAQSFEKWVTSSSTAKKAFETMNTSGVKVFSSLLSAAGRFGDGLVNILTQFAPLFEFVANGLNNMGASFQKWANKVSTQQGIQKFIDYVKVNLPIIGKIFGDTFLGIFNLFKAFGSNSQTIFEALAQMASKFRAWSEQVAQSDGFKKFIDYVQQNGPTIMSLIGNIIMVLVNFGTAMAPIASVVLNVVNAIAGFVAKLFETHPIVAQIIGLAITFGGVLMTWYPVLSGIVSYLAPLISKLGFLRGVLPLLGKAFSLLSGPIGLVARLLPLLGAAIGFLTSPIGLVIGAIIALIAIFVILWNKNEAFRNFIINLWNSIKDFFINLWTTLATIASVLWQLLLTTIVNIVISIQTWLTTTWQNILTFLSTLWNTLIVIATTIWNLLVTVIVTVITTILTIQQTVWNAILSFLQTIWNTVVSVATTVWNTLVTVITTVLNAINSFVTTIWNAIYSFFASILSRISSTVSQKFSEVYRWISTKIQQAYSILSSILSNMWSVVSSKFSQIVSTVISKMVEFYNAIKQKVQDSLNAVVNFVGEFMDAGRNLIMGLVNGVKNAAGALIDAVTGAVSGAIDKAKSLLGIKSPSRVFKQIGVYTMQGLGIGVDQEGQNAVGSVVDVARQLTKAFNPVLSLPSISDATSGLNGLSGLSANLTTQIQHTHSFETSPRMKTVRIEMRLDNDAIYGIVNDKQAEKHSIFEM
complement(34503..34853)           PHAGE_Staphy_187_NC_007047: ORF047; DJ458_000155; phage(gi66395258)                  1.22e-75            StaphylococcuspseudintermediusMSDLKVTSLKEINEMTLTEFNYRMYALQFDVLKEEYERYKLAFAIRDAAATKNEGTEKEPKEVYRFKSPNDILDYEVNYNRLLDGKEIVFTDELEEVEPENNNFFKAIAEINNSIK
complement(34883..35263)           PHAGE_Staphy_187_NC_007047: ORF043; DJ458_000160; phage(gi66395255)                  4.44e-80            StaphylococcuspseudintermediusMVTVKNGKHELELKFGLGQLTSIDKALGLNVEKVNLGEGLSMLIPKLESGNIIGLAKIVSAATLGQKGRPKTDEELEEVLINARDEYGSFKKFGQAIIDVLGERPLTRDLVQDHLKDEEAETVTEE
complement(35323..35976)           PHAGE_Staphy_187_NC_007047: ORF022; DJ458_000165; phage(gi66395237)                  3.04e-153           StaphylococcuspseudintermediusMAKKDSKDRLFLFRIAGQKVDAKKMMFLTEYSVSLEADSENEDTMDDSYSTGGSLENTISATAKMDYRDSFADEVEDAVRDGIIYEAWEIESKVEGKGENTGKFKAKYYQGKFKKFESKGEVKGVDEYETEFNVFGKYQRGFATIPETIKTKLELAGYRFHNTTKDDPATEVTQNIPQPTVDTEDMEDSSDDMMSGVAKPTNVQAVPNAKSVSISAE
complement(35994..36389)           PHAGE_Staphy_187_NC_007047: ORF039; DJ458_000170; phage(gi66395251)                  5.59e-64            StaphylococcuspseudintermediusMLKSTAQQALFDYIYSALEGYGFDVIDFKELNTQISYPFFVVRNVDINKTKYNMDNFGGELTATIDFWTYADDRGRHDSIVYSVDTEFSNIDSVEGYQLMIDDMDIKTLNDVENSDRQLLHTVFIANYKLF
complement(36401..36751)           PHAGE_Staphy_187_NC_007047: ORF049; DJ458_000175; phage(gi66395260)                  1.99e-58            StaphylococcuspseudintermediusMQSRGFKGLMSHLEEMYDDIDDDVDEILKNNAIEGIGIAVSNAKKVMNKGYWTGNLARSIEVKKVGELHYRVISTAHYSGFLEFGTRYMEAAPFMFPTYQTLKKSTLEDLRRLLNG
complement(36751..37056)           PHAGE_Staphy_187_NC_007047: ORF107; DJ458_000180; phage(gi66395285)                  8.02e-60            StaphylococcuspseudintermediusMRYSERVDLVVEERSKYNPLTKKKEASYKTYTKIPCNVNRLSRERTQLEFGEMAKDVSVVRLPKQLKFEPTHVLLKGRKYKVMDIRVYDHSTSLFISEVLF
complement(37053..37385)           PHAGE_Staphy_187_NC_007047: ORF042; DJ458_000185; phage(gi66395254)                  1.93e-70            StaphylococcuspseudintermediusMSYLDDVKSRIGLNDSEQDKQLNSIIDNVAAELLSRLPVDTISIPDRLRFIVVEVSTKRYNRIGAEGMSTDSQDGRSNSFERNDFEEYQGIIDALYPKLDSSERGSVNFY
complement(37397..37846)           PHAGE_Staphy_187_NC_007047: ORF031; DJ458_000190; phage(gi66395244)                  3.42e-89            StaphylococcuspseudintermediusMTRKLKLYSNDEVVASAEGDGRVNVSLSGLEPATTYPKGKYKVAFEENGKESEKVDVPEFTTNSILITSISFVPESKTITNGTNEQLEPNISPSTATDKSLSYASNAPETVSVDENTGVINALQNGEAVITATTKDGSNKTAQITITVE
complement(37936..38847)           PHAGE_Staphy_187_NC_007047: ORF011; DJ458_000195; phage(gi66395226)                  0.0                 StaphylococcuspseudintermediusMPAENNLINVEALGKAKSIDFANKLGVGLTKLFEALAIQNKIPMNIGSALKQYRFKVEDSEKPNGDVAEGDVIPLTKVTREQVDITELQFAKYRKSTSAEAIQAHGYDLAINQTDNEMIKYVQKKFRAKFFGTLKSAIENEERTNKAKLSAKNLQGALSKGRANLSVLLDDEITPIAFVNPNDTAEYLANGFINSTGAQFGVNLLTPYVGVKIVEFADVPQGEVWMTVAENLNVAYANPRGELARAFAFSTDATGFVGVLHDIQPQRLTSDTIYASAISMFPENIDAVIKVTIKADEVSNLPS
complement(38865..39476)           PHAGE_Staphy_187_NC_007047: ORF021; DJ458_000200; phage(gi66395236)                  1.60e-79            StaphylococcuspseudintermediusMNTQDKVKFNLQFFSESLNKDSLNDDPEKPKDTDLDSDEETKTYTEEEFNKRLHDELSRRMKQKEKEKQEAVEEAAKLAKMNKDQKAEYEREKLEAELNQLRAEKAMNEMRSEARVMFKDKDIDVSDELLDIVVSDSAETTKNNVDNLTKILDEMVQKKVQETLRQNSPKSFSKSGLSRDEILAIKDDSERQSAIAQNMHLFN
complement(39653..39892)           hypothetical protein; DJ458_000205                                                   N/A                 StaphylococcuspseudintermediusMLDLKLISKEKKSVTYDYYPENQKVSGRITIGIDDLEILHVKKSEYDEDTSKYIGHAIHRVTENIKNNKFPETELVAWG
complement(39903..41300)           PHAGE_Staphy_187_NC_007047: ORF009; DJ458_000210; phage(gi66395224)                  0.0                 StaphylococcuspseudintermediusMADSLDYWLERAQNTINSELIEDAKAAAELQRIVTLMYAEIAKELLAFYAKYATAEGLTIAEAKKIVDEFDVVAFQHKAKVLVKNKDFSKEANKQLKKYNTKMYVSREKLLKQNLDLLVTEASIKLENHIEKSLVKAIDREVERQSGILGTDINVTDKKIKAVVNSNFKGVTWSERLWDDMDLVRKEVERVATNVVNRGRHPNEYVADFKKKTGATTHDAKRLLVTESARVQTEAQKLSYLETLGEDGEYEFVAKRDEKTSKVCRHHDKKVYKVKDMTPGVNAPPMHPHCRSTTIPHIGNWRDDFFKKRKGKYRLKDENITRPIIKESGALNDNNDPYMKKRIRHATTYYNSVRNRRKDIEIEKIAENTGFKRNTIKRVYEHIFENEYNLANGFQRFAPDFDMANSWSRLRDGKHIRDEDLIMLHHEALEHYLMNKYNYSYRDAHRVVVKKYDYEKALKARETEQ
complement(41293..42738)           PHAGE_Staphy_187_NC_007047: ORF003; DJ458_000215; phage(gi66395218)                  0.0                 StaphylococcuspseudintermediusMTVYTINNINTKFSPLANDDFVVSDLAELLKEENLRNFVSRHQTEQVPRLEMLEAYYLNRNTDILAGERRLQKYGDKADHRAVHNYAKYVSRFIVGYLTGNPITITHQDNQTNDKIIELNDLNDADEVNSDLALNLSIYGRAYEIVYRDFEDNDTFKVLDPKSTFVVYDQTLDKKVVAGVRYFEKKGKDKVPVQHVEVYTTDRIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLNDQFKQGDFENVITLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLDGEDAKAFRDANMIHLQPGTNANGSEGKAEVKYVYKQYDVAGVEAYKKRLQNDIHKYTNTPDLNDEQFSGVQSGEAMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNLTGLKQHNYADLTITFTPNLPKSMMESINAFNALSGGVSESTRLSLLDFIDNPKEELEKMHEEEAQREKQADKRGYGEAFENHTNVDDLNG
complement(42750..44024)           PHAGE_Staphy_187_NC_007047: ORF005; DJ458_000220; phage(gi66395220)                  0.0                 StaphylococcuspseudintermediusMTKVSLNFKQPSKVFNKNIFEILFNYDYFTEVHYGGGSSGKSHGVIQKVVLKALKDWEYPRRILWLRKVQSTIKDSLFEDVKECLINYGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGVSDIVMEEASEFTLNDYTQLTLRLRERKHKLKQIFLMFNPVSKLNWVYKYFFEHGKPMKGVLIRQSSYKDNKFLDDMTRENLEMLATRNPAYYKIYALGEFATLDKLVFPKYEKRIISDKEVGHLPSYFGLDFGYVNDPSAFIHVKIDSDNKKLYVMSEYVKKGMLNNEIAQVINDLGYSKEKITADSAEQKSIMEIKANGIDRIVPAMKGKDSVMAGIQFISQFDIVIDERCYKTIEEFDNYTWKKDKNTDEYYNEPVDTYNHCIDALRYAVEALTIQKKHQKKDKNTLRKIKSLF
complement(44011..44454)           PHAGE_Staphy_TEM123_NC_017968: phage terminase small subunit; DJ458_000225; phage(gi388570350)     4.00e-71            StaphylococcuspseudintermediusMKLSIKQQRFADEYIKTGNATQAYVKAGYSKNKANTNATKLLQNTTIKQYVKERIEQAQVESLMSITEALALSASIARGEPQTAYTKRYDHLSGEVDREVTYTITPNVEERQRSIDHILKVHGAYIDKKEITQKNIEINIGDYDDES
complement(44524..44751)           hypothetical protein; DJ458_000230                                                   N/A                 StaphylococcuspseudintermediusMEKSKIYEYLEKFVNPKDEKAGTMEDFNQFKADLYYLGLEGYLNVKYKVDKDMQPQPDGWQITDKGIKFLDEYES
complement(44937..45362)           PHAGE_Bacill_vB_BhaS_171_NC_030904: capsid decoration protein; DJ458_000235; phage(gi100066)     2.17e-11            StaphylococcuspseudintermediusMIELIEMYRTNKLEIESLKLRKDICNDEIENWGAVSVNDKARLGKKHDFLSRIKQTDNVVDEINVINERLQTLKTRQKKILDVIDKFEGLEHKILKLRFIEGYKLADIAESLGYSEQYIKNKHSELMKRIEFKTSHKSKVL
complement(45506..45673)           PHAGE_Staphy_YMC/09/04/R1988_NC_022758: integrase regulator RinB; DJ458_000240; phage(gi557308111)     1.27e-12            StaphylococcuspseudintermediusMIKRTINLLVTLALYELGKHLTEQLIIILTANDDVDAFNEYDHIDLNDIRAEVSG
complement(45689..45877)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: putative single-stranded DNA binding protein; DJ458_000245; phage(gi100050)     8.47e-36            StaphylococcuspseudintermediusMTQYLVTTFTDSTGQTFTEATKARENQAFTVVEADSKEEAIKKYESPKVKQQVIVCNMPDWA
complement(45874..46302)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: recombination protein; DJ458_000250; phage(gi100049)     2.71e-89            StaphylococcuspseudintermediusMFWFDKSNQDVIFMDKRQLQTNLCDGRKLEVNPDIVADFRNMPFDDESFYMVVFDPPHLIRAGKNSWLSKKYGVLEETWRADIKQGFDECMRVLKTNGTLIFKWNEEQIKLSEVLKCFSQKPLIGNKRSKTHWLVFMKGAEQ
complement(46375..46911)           PHAGE_Staphy_SA12_NC_021801: dUTP diphosphatase; DJ458_000255; phage(gi526178054)     9.82e-97            StaphylococcuspseudintermediusMTNTLTVDQLQELLKIQKEFDDRIPTKNLNDTVASMIIEYVEWVNTLEFFKNWKKTPGKDLDTQLDELSDFLAFNLQLALEVIDGNELNELIDVMVNLVEEQEDLPRLHSVYFVHALHTLTGQFVNGIDSSIVQVIVMPFLYANQYYTIDQLITAYKKKMEINHARQDGTADKDKGYV
complement(46930..47301)           PHAGE_Bacill_Shbh1_NC_030925: hypothetical protein; DJ458_000260; phage(gi100059)     1.94e-39            StaphylococcuspseudintermediusMKVFTINNLNIQIQQLKEKNIISTKEISDGHHTFGQLYHDRAVLFAVILNTHKEKAWKSKQHDDGTMFDGMFIVGITTPQGHYTYHYDLEYWDIYNVKEVEKAPKWDGHTHEDINRLFGLINN
complement(47303..47569)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: HNH endonuclease; DJ458_000265; phage(gi100046)     9.72e-58            StaphylococcuspseudintermediusMKIENIKLVVASISKDIYMAKINKDSMMDIDNRRVATEEVLRAAAEWFITNQKTLCKFNGYGTLAWIPDDRHTTEEIKAHLNKLQEDE
complement(47592..47852)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: putative transcriptional regulator; DJ458_000270; phage(gi100045)     5.38e-35            StaphylococcuspseudintermediusMSEQTITIIKKSCDVCGYEITIDNEDDERIKKFRMPVSFTTDQTEGLPCKPYISYETIDLCEECSAKAVTLLGMGAQGYNSYRFKK
complement(47853..48068)           PHAGE_Staphy_2638A_NC_007051: ORF021; DJ458_000275; phage(gi66395470)                2.24e-09            StaphylococcuspseudintermediusMEHGSKEYYKEQSKYCHNELIKCSKERDDLKRKLDDVVSMVNAYITAERAYSGESAYNLLENELNRILEDE
complement(48068..48457)           PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; DJ458_000280; phage(gi509140967)     5.68e-22            StaphylococcuspseudintermediusMMKTKKEMSLHELIQWAWENDIKSNVFYGSLGGRVEFNSHTHLFTLGVESTETFIVEVEEEITEETEIPVLVELFMSGLDEIIHTYHRTSIGEAIGEVHKGAEALPTAFYMLNDDMTMTLIWKDGELVK
complement(48600..48812)           PHAGE_Staphy_2638A_NC_007051: ORF074; DJ458_000285; phage(gi66395495)                6.96e-34            StaphylococcuspseudintermediusMILSNSVRQRYRTDTVGKTPTELQKELRKRGVRGFVVNVSHNRVTMLVDRRDVKRNKECMRCLTSTETRK
complement(48833..49285)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: DNA adenine methyltransferase; DJ458_000290; phage(gi100041)     1.99e-33            StaphylococcuspseudintermediusMEIKDLKIGDKVSVEVGSQQFKDTDDEKWVYETIFGTAEVTKVNETYEYANVIFGNGTYGEINADVEWYLIPSNTKIATHERPAHYGNSNKDLIDYWCERYSPEELRGAFKSQISKYVDRLGYKDDVVKELDKIIDYATRYKNHLKNLNS
complement(49446..49766)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; DJ458_000295; phage(gi100039)     7.40e-11            StaphylococcuspseudintermediusMTEAFSAEEVEVMESNGITRGCALNRIKRLGWSRKQAITKPPIKKRLKIVEDEKREILKLESITTPEEAYQRFLESRVDKSHLTKYPQSVNPSDYFKFLESKVLWS
complement(49779..49997)           PHAGE_Staphy_EW_NC_007056: ORF072; DJ458_000300; phage(gi66395861)                   2.18e-06            StaphylococcuspseudintermediusMNKMYNLYNSNKEPVVVVSRNIDGQYHIKGLDNTQLAHINRTVDDIDDFKSTFNLLSFEELGQLDLTELLDF
complement(49990..50421)           PHAGE_Staphy_EW_NC_007056: ORF031; DJ458_000305; phage(gi66395837)                   1.80e-46            StaphylococcuspseudintermediusMKETRIEIFYKDEKHFDKPMGSPRPRFRRVKQFVQTYMPTHYTKHKKFIADQMPDLKSEKDIKLTAEFYFPPLKSWSKKKLTAMLTRYKNTKPDLDNLLKTVLDAGNGKLWNDDNQIVEIRTFKKWSETAQTVLIIEELNDDE
complement(50402..50626)           PHAGE_Staphy_CNPx_NC_031241: tail fiber protein; DJ458_000310; phage(gi100052)       2.80e-15            StaphylococcuspseudintermediusMTVLEMKEFLGDLYRSTYKDDTLIQINLVQMGWAIERLLVSERISPFDDYDEVSHLIFDEIDFKQRSRHERNQN
complement(50623..51867)           PHAGE_Staphy_EW_NC_007056: ORF010; DJ458_000315; phage(gi66395817)                   0.0                 StaphylococcuspseudintermediusMIDRLSTEEAILANLMKNPDLFSKLKLKPDMFVDEDVRKIIEYIKDTGKVNPNEIYFKCRDDKDFVNVKRFTQLSKTNGTDRMFFMDDQINLLDDYITRKAIEGSQNFLSNPSKKDFVYLLDELNSLKDITIEKSNKTDEFLSQVMESVLSDEPPQTIHTGFGKLDGLIHGFERGQLNVIAARPSMGKTGLALNTMWNIAKRGYEVSFFSLETTGDIVIKRMIAMIEAISLSDIKRPFELGTEKTSKVMEGINKIKQHKINIYDESHLTPSRIREQAAKPSDKPQVIFIDYLQLMESDAPTNDRRVDVEKISRDLKIIANETGCIIVLLSQLNRGVESRNDKRPMMSDLKESGGIEADASMIFMLYRDDYYNRDEAQQESSDMSELEVIVSKNKDGATGTVKFQYYKATQRFFT
complement(51860..52207)           PHAGE_Staphy_EW_NC_007056: ORF041; DJ458_000320; phage(gi66395846)                   7.01e-54            StaphylococcuspseudintermediusMPMTEKEAFQLITLVSDSYNMEFHKSKYDAWTSILIKEGDYEASVKKLKNYIKESKYKPTLADVLAIKPKEFVAEEKPKEETHQYKLKHDPEYAEEWRKVKERGFQLLQELKADD
complement(52212..52958)           PHAGE_Staphy_42E_NC_007052: ORF016; DJ458_000325; phage(gi66395524)                  2.38e-113           StaphylococcuspseudintermediusMTKLLIDDYPIQVLPKLAETIGLNEAIILQQIHYWLNNSNHQYDDKKWIYNSYPEWQKQFPFWSLMTIKRAIYSLEKQELLIVGNYNKAKFDKTKWYSINYHTLESMIRPSYQNDTTSVPKRNDGAYQNDTTNTIDYTETNKQKETDDVSHIFQLISKEVEMIQNPLKAQELEQAIESFESNKVEIVQVAIDYCKQNNKGINYLIKVLDNWSKEGIKTKEEATKKIEPKKTKKTNDFLEQKRQELFGG
complement(52951..53628)           PHAGE_Staphy_SA13_NC_021863: hypothetical protein; DJ458_000330; phage(gi526244887)     5.93e-148           StaphylococcuspseudintermediusMPLITSYITQDDGTTTVVISGVELGDKETLLLDNGFDVEVDVNVVDPFKITGKQRRKIFALVKDIEEHTGQPMDYMRHMFIEYVRTYYGYDERISLSNCTRTQASQIIEITLDWTFHNDIPLSYKTSNLLKQDKAFLYWSTVNRNCVICSKPHAELAHYHAVGRGRNRRKIDHTDNKVLALCREHHTEQHNIGINSFNDKYHLHDSWVDVDERLNKMLKGGKADD
complement(53629..54180)           PHAGE_Staphy_88_NC_007063: ORF027; DJ458_000335; phage(gi66396359)                   1.62e-81            StaphylococcuspseudintermediusMKEIWKDVVGYEGLYEVSNKGGVRTHKFKTTYTKKHGVRHWKQRYLKNKTPNGRDVRVALWKDGKPKDFLVHRLVAFAFIPMIEGKNCINHIDGNPKNNNVDNLEWCNHSENNRHAFENGLIDTQKAVSLTQLDTGIKLEFKSMAKADKWLDRSIGYTSCRLQRNYTTAVARDNTIYKIEKLI
complement(54193..54606)           PHAGE_Staphy_37_NC_007055: ORF034; DJ458_000340; phage(gi66395761)                   6.81e-64            StaphylococcuspseudintermediusMINRVVLVGRLTKDPEFRTTQSGVEVATFTLAVNRNYKNKNGEQQADFINCIVFRKQAENVNNYLNKGNLAGVDGRLQSRSYENQEGRRVYVTEVICDSVQFLESKSNGQSNSQAKQQQRQDNPFDNSDFDDSSLPF
complement(54606..55274)           PHAGE_Staphy_StB12_NC_020490: ERF-like recombinase; DJ458_000345; phage(gi939535492)     1.76e-99            StaphylococcuspseudintermediusMAELNLYQKIADVKANIDGFTKDTKGYNYTYVSGSQVLHRIRSKMIEHNLLLVPKTLEETYSVEDVTRYSPKYKKQVTTTEYTVKVKLIYTWINADKPEEQLELPFFAIGQQDDPAKALGTALTYSERYFLMKFFNIPTDEDDADAKQKKEQYTKPDAKAIGTLKEEMLKFSELMQSLGKQVTIDDVQNQLGISDIQALTNAQISALIKKLDNWTKQAKDNE
complement(55274..55759)           PHAGE_Staphy_StB12_NC_020490: hypothetical protein; DJ458_000350; phage(gi939535491)     4.64e-85            StaphylococcuspseudintermediusMTTLFNLTDAYQQVYDLIAEQGDETVLIETLQSINDALEEKADGYVAVIKTLEADNVAIDEEIKRLRQRKTSNQNGISRLKESLQCAMESTGKEKFKTALNSYSISNNPPSLDVTEESLIPKEYWVSQAPKLNKKDLLKDIRNGADIKGVEVKQTRSLRVR
complement(55743..55967)           hypothetical protein; DJ458_000355                                                   N/A                 StaphylococcuspseudintermediusMEKEKILITLERYDQLIAERAVYKNEAQRLEDENIELKAQIKDLEEENNKIPSIHFNTPKTTDEEEVLIVDDTI
complement(55979..56239)           PHAGE_Staphy_187_NC_007047: ORF060; DJ458_000360; phage(gi66395264)                  1.05e-08            StaphylococcuspseudintermediusMYFPNGEEFSGIIEVEGFKFRKHVTRQDDYILIEVTDMTYKIIAETKVYDVSDVDIAQEVISAALYDYIEYQTDDLDKIMAQLIKN
complement(56321..56542)           PHAGE_Staphy_vB_SpsS_QT1_NC_048192: holin; DJ458_000365; phage(gi100034)             4.73e-18            StaphylococcuspseudintermediusMKTFRKSSNQKEVINIKHTLAIFMTIAVAFILATVLAFSGVYFTTLLFIVILAEVLTYNLTKYVYDALKKTEC
complement(56499..56822)           PHAGE_Staphy_2638A_NC_007051: ORF033; DJ458_000370; phage(gi66395479)                4.36e-71            StaphylococcuspseudintermediusMVQTLQVTVPIPDGFVLIEKDKVRELEDLANDPVWDLKDLKQKLKMSSDDTIKDKLLYNPKFEKQLKKLGIAHYPDDSFNRWRFNARKMSRFIDENFSEIIKSKGGD
56889..57128                       PHAGE_Staphy_187_NC_007047: ORF074; DJ458_000375; phage(gi66395271)                  4.61e-10            StaphylococcuspseudintermediusMEQVHACLLGEWVNLHDDENCKMGPRMTSPSTWWEENAELWSPIKKSQADTMYQQDYIVINYKGKDYRIHPIFIQIVSS
complement(57118..57297)           PHAGE_Staphy_EW_NC_007056: ORF100; DJ458_000380; phage(gi66395870)                   9.49e-30            StaphylococcuspseudintermediusMKNTIQKFLEFRKQFTPRQWYEINQIIDNQFKKKAAELQLDDQDVEVIKNIITQQKIMN
complement(57403..57597)           PHAGE_Staphy_AJ_2017_NC_048644: minor tail protein; DJ458_000385; phage(gi100056)     4.62e-23            StaphylococcuspseudintermediusMQEHGTKAIYYFYDEEGNRRLWSVANLNESVVSGCKARIEFFKKKNPDVDNLFIQIDGIEFKLL
57654..57917                       PHAGE_Staphy_StB20_like_NC_028821: CRISPR-associated endoribonuclease Cas2; DJ458_000390; phage(gi971746517)     8.55e-42            StaphylococcuspseudintermediusMKSYIISYDLNDRKDYPKLISRIEDYPNAAKINKSVWFVNSVLSAKEIRNELKFFVDNDDSLFVATLTGEAAWSNVICDSKHLKDYL
complement(58093..58860)           PHAGE_Staphy_CNPx_NC_031241: hypothetical protein; DJ458_000395; phage(gi100039)     1.20e-164           StaphylococcuspseudintermediusMQALQEIKIENNSELGAVVSSRVVANELGRRHDNVKRDLEQILMSSKVSTLIIDSNYKDSRGRNQKEYLLTKDGFTLYMFNIQGHNEFKMAYINRFNEMERQITQPIASYMIEDPVKRAELWIEEQKEKQQLQLENNMQKQKIAEYEPKASYLDTILNNKSLVTVGQIAKDYGMSAQALNKLLHDLKVQYKQSGQWLLYSKLHDKGYTHSSTTEIEHKDGSTSVRMNTKWTQKGRLFIYNLLKDNDILPTIEQQN
complement(59097..59312)           PHAGE_Staphy_X2_NC_007065: ORF032; DJ458_000400; phage(gi66394701)                   1.08e-39            StaphylococcuspseudintermediusMLTNLEEVRKQKNVTLVDIADLLKIRYQTVSDKINGISDFKFGEALLIKNTFFPEYEIEYLFSREKEKVAT
59507..60199                       PHAGE_Staphy_P1105_NC_048636: holin; DJ458_000405; phage(gi100034)                   5.17e-59            StaphylococcuspseudintermediusMEKEKHLKHLMEMKSGSVKAFSKEIGLAYTTVRSILERGVFNAKVDNVIKICKGLNIKPENLMDLDDTIISESITTLIKLAPPRQKRVLDFANEQLNEQNNKVLHINSHNIISEEVAVYGYASAGTGETLIDGVEFTTQYNGHIPNHDFALQVNGDSMEPLFEDKEIIFVDKTKQINSGQIGIFVIDGEAYLKKVFISDKGIRLVSLNSKYPDLHFDSSHDIKVAGKVIL
60255..60890                       PHAGE_Staphy_2638A_NC_007051: ORF015; DJ458_000410; phage(gi66395465)                4.68e-133           StaphylococcuspseudintermediusMNRLIFLLFASLLVLSACGNEKEKEEPKKETKSKEKNVDKDKKNKEVKANLNVEEDNSKVKDEQFNNKIDVNNITDRKTLESVIYGNYTEMDKIHAYNSAVTNGIIPQGNVMEGPATAAYESSLRIEKGQEQSIYEQNTNGDLSEEEAQRMADLASQYDEEVAKHNANVQAHNDWINGQVEWSNASESEKEAIRKRDAEKYGYEYNPEDYE
60947..61984                       PHAGE_Staphy_phiBU01_NC_026016: integrase; DJ458_000415; phage(gi744692806)          0.0                 StaphylococcuspseudintermediusMKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNELRQGFNFENNLTFEDYFKNWIETYKENIVSENTFRHYRFTLKHIQRHKIGKVEISKINKQMYQKFINDFSENRAKETIRKTNGAIKSALEDAVYDGLIAKNPTYKITFKAGKTTKSEEEKYISLEEYKALKEYLKDKSSKSALALYIMICTGCRVSGVRSMKLEYINEFRSELYIDEHKTDSSPRYVAVGKNDLRHIINVIKNSTISYDGYIFKDAGKLISINAINKTLKKACESLGIKYITSHALRHTHCSYLLAKDISIYYISKRLGHKNISITTSIYSHLLEEKFSEEEQKTKNILDAM
62403..62414                       attR                                                                                 N/A                 TGGCAAGTTCAT
complement(62591..62878)           hypothetical protein; DJ458_000420                                                   N/A                 StaphylococcuspseudintermediusVNLDRPSEEDELGGFVRVMEKEVIFVFDKYKIKRRCQIMNMYMLYVEAVIIATLLSTNQKFKDVFMNIGDVRTEKQICVYDTSCIVYNKARIVE
complement(62969..63913)           DNA-binding protein WhiA; DJ458_000425                                               N/A                 StaphylococcuspseudintermediusMSFASEMKNELTRIEVDHANAKAELSALIRMNGALSLSNQQFVINIQTENATTARRIYSLIKFVFKVEVEILVRKKMKLKKNNIYICRIKMKTKEILDELGILKNGMFSHDIDPEMVKDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSLYEGHSTGLTQLMNTYELNAKSLERKKGWITYLKEAERIAEFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIQLIDQEIGIDNLPDRLREVARLRIEHQDVSLKELGEMVSTGTISKSGINHRLRKLNEMADKIRSGEPFEV
complement(63960..64955)           YvcK family protein; DJ458_000430                                                    N/A                 StaphylococcuspseudintermediusMKQLKLVLIGGGTGLSVLARGLKTFPIDITAIVTVADDGGSTGKIRDEMDIPAPGDVRNVLAALSDVEPTLEQLFQYRFKEDQISGHSLGNLLIAALTNITHDFGHAVKELSKILNIKGRVIPSTISSVSLNAEMEDGEIVTGESNIPRKQKKIKRVFLEPADVQPMDEAIEALREADLIVLGPGSLYTSVISNLCVKGIANAIVESDAKKLYVSNIMTQPGETDHYTVMDHIDAIHQQLGNHVLDFVIANQLEFSPQIIEKYESKGAKPVYYDKDELNQLGVQLVTGQHLVEVSEHDYVRHRTEVLAEMIYEIALQEISTIQFDPDQFKS
complement(64957..65865)           PHAGE_Coryne_Lederberg_NC_048790: hypothetical protein; DJ458_000435; phage(gi100061)     1.49e-08            StaphylococcuspseudintermediusMQHEENNEIVKSELLVVTGLSGAGKSLVIQSLEDLGYFCVDNLPPILLPKFVELMEQGNPSMQKVAVGIDLRGREFFQYLVREIDAVQSRKDVIVDVLFVDADTEKLISRYKETRRKHPLQEHTELPLVKAINEERKLLAEIRSLANYTLDTTTLSPKALRKRVYEYFNKENKSTFTINVSSFGFKHGIQIDADLVFDVRFLPNPYYVPELRPLTGMDEDVYKYVMKWKETNTFYEKLLDLLLFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAQRLAEELKQIYDYNVYVHHRDAHIESGE

#### region 2 ####
863909..863921                     attL                                                                                 N/A                 CTCCTTTTTATTT
complement(877592..878104)         PHAGE_Staphy_PT1028_NC_007045: ORF010; DJ458_004225; phage(gi66395174)               7.56e-30            StaphylococcuspseudintermediusMVRLKRINKTLIYRVAKITEWQLLTDFNPFYVSEKIDDINEYIESMYHLNTSVVHYDSTHGISPASYPIDKLAEHIVEQKEALKRYKKKTSAMIAMLNKVIATYSLEDRKQIIKYMRTGSKYKTCGAIQRLQEDLYPIYYKWRVACQNRRKLKRLEDRRTRASKIKQYSH
complement(878256..878600)         PHAGE_Staphy_PT1028_NC_007045: ORF015; DJ458_004230; phage(gi66395179)               1.43e-37            StaphylococcuspseudintermediusMKEVKEKVQELPDEHRLVLNVIINAPNKYITKEKMLNQLGYEKTSSNERWIRRIISELSTIYAYPIGCNYSSDRRGYYMITTQEEKAQAIKSLTRLIEGSIRRREAVESLVIKE
complement(879207..880862)         PHAGE_Staphy_PT1028_NC_007045: ORF001; DJ458_004235; phage(gi66395165)               4.40e-153           StaphylococcuspseudintermediusMAELPHDVIEVIKKEATADIIPTNYKVGDNGWLYKEVEKGKGDNAKVVPVLITSTTPYISKKYKDIETGEFTYQLKFNSAEKENKHTVLARDLADATHIINLADRGFDVNTTNRVDLVNYISMYMRLNPLPITRIVTRLGHVDRYFIHPLIKDVELAIYEQGYKNIAKEFITKGTLQDYAQNVFTIVSKSYPAMMLLYASCGSILLHDFDVEPFIVDLSGASSRGKTTALKVASSVWGTSNLIGEWNTTRVSIERKSAFLNSFPLLLDDSRKANPYMLPDVIYQFSGGREKGRGNKSSIEVERTWQNIMISTGETSLADNGKEKAGIGARIITLQDDPFNSDVSFIDLYKGINSQYGTLGIAFMEQYNAEKEAYYRSFKSHEERLIEKAGDNEIMARIGRNFALLQVAGEIINDIDGFEHDPYVTINQAYNSMLETNRNIDKPKQLLEGLLDNLDGERNYITGPNYGEVYNGTVKAVFNKDYLCVLTDTVKSYLGDEFYTITAEWRSRGYLITDKERIVKQVKYKGVRYRGYAIQTNVIEELGFDFRKESY
complement(880867..881739)         PHAGE_Staphy_PT1028_NC_007045: ORF003; DJ458_004240; phage(gi66395167)               8.01e-49            StaphylococcuspseudintermediusMNYIKYEIKNDTEKIKIQHYNNLSADSFEKEYHFCWSEFLNWLSVKRIDPTNKYARGLMLCGEVKTGENDNVIKRRNNDNVVNRNMLVIDYDELDSSIDFIQTIYDRIGKLSYCIYSTYNHTPEKPRYRLVIPLSRPLDSKCYKNAIALFGEHIGLKYDESSKVASQVQALPVVKNKDSEFIFKVNDASIFDTDELLTKVDIYKEVQGEPASPFRKRDPSHWQSIAMGVGAGERNIVLAQLIGYLLRRYVDPSLVYGLAYGWAKQCTPPVGDKEITKTFKSIYTKHTRKE
complement(881754..882074)         PHAGE_Staphy_PT1028_NC_007045: ORF016; DJ458_004245; phage(gi66395180)               8.85e-26            StaphylococcuspseudintermediusMNWEIRNLFSEIEIVKEKINDAVTSFGWFEDEYFIHEPSHVLSMNEVKIHGYKYHEHRIQIAQLCDLMHIYIERLDKQIQEFKEIEKASSAKFGDRTDNAKINNNR
complement(882078..882425)         pathogenicity island protein; DJ458_004250                                           N/A                 StaphylococcuspseudintermediusMGLSQRKHLYKVVKVMEKAIVVKSTTSFYEQALKMIHKELFKIVSYLKFDSEEYEIINEVVQTLDDVIHETQDIYHYSIIDDKGEHKHTTDRKGHIIGILEWALDYIVGNIEVEE
complement(882489..883130)         PHAGE_Xylell_Xfas53_NC_013599: Bro-N family protein; DJ458_004255; phage(gi273810441)     3.19e-20            StaphylococcuspseudintermediusMIKQIFNKKEIRFVEKDGEYWAVASDVAKILGFRDAFNATKNLPEHVRGTLKGSTTSGKKKARKFQDYTVINEKGIYRLVMRSNKPEALDFQDWICDVLVELRQATGLKGFEVFRMLDKQKQKEAMDNLKNGIEGISRNDYLKAQTISNKAVSNVFGFAKMLKKQDMTREMLELRQQILDETVEFMIFVNKYNLNLSISDHIYNKYTNNQKLA
complement(883360..883620)         DNA-binding protein; DJ458_004260                                                    N/A                 StaphylococcuspseudintermediusMTQLLSNEASQHLVTEIVRIAEAVALERVRQNRKRYLNQKEVMEEYRCTHKDITKWEKVGLKKFRKGKSWIYDRRDIEQVLESLKQ
complement(883662..883889)         PHAGE_Strept_phiARI0031_NC_031910: primase; DJ458_004265; phage(gi100047)            4.50e-15            StaphylococcuspseudintermediusMVIKKAELKRKYLKPKLKLREERLKRELSATFMARLIGIDRRQYEAKEKGLFSFHDYEIKIISDFLNIDKETFFI
884006..884791                     PHAGE_Lactob_T25_NC_048625: hypothetical protein; DJ458_004270; phage(gi100030)      1.38e-09            StaphylococcuspseudintermediusMSELPTRYGTIIKTLRKYFNITQSKLSKKTGFSQNTISNHENGKRNIGFNEIETYSKALGVPSYIVHRISDEIKEKGYSPTLNDFSIFDKMYHYVKKAYYNEGDIYFSSIDLYDETIELLELLKEKKIDVNKVSYEYVLDLYKQIVSNDLDVSKTNYETLAKNRKLNDNLSKVTIEEIAEFHEKYIALMFENLETHDNRKKALEEIEGLKEQAIKIGERLRLAPNKQYEAIKGEPMYKLFLYKYPDRLEAQKNNILEKGNN
884871..886007                     PROPHAGE_Oceano_HTE831: integrase; DJ458_004275; phage(gi23097608)                   2.23e-94            StaphylococcuspseudintermediusMIKKYKKRDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTERDAKIAEARLQTEVDKSGFLNNDITTFKQVFDLWLEQYKNTVRESTYLKTVNVLKCGVLPYFENVPVKKITVSYCQKVLNEWNEKYKQVQHYKTYAKMVLDYAVTLKVIADNPFTHTKTPRKKENASNNETALYYTSGELKKFLSFTEYKPLYHAIFRTLAFTGMRRGELLALQWQDIDFNKATLSINKTWSKVENGYIIQPPKTKKSIREISIDSTTLDILKRWKRYQQEESFKYGHNTMNKSQYVFTNVSNNKPLNIKFIFDTLKLLCERHDFKRIKVHGFRHTHCSLLFEAGLSVQEVQSRLGHSDIQTTMNIYAHVTEKQRDNVAEKFANYINF
886590..888440                     PHAGE_Entero_EFDG1_NC_029009: anaerobic ribonucleotide reductase subunit; DJ458_004280; phage(gi971765192)     0.0                 StaphylococcuspseudintermediusMTQLEKQLTGLMTKDPTIVNENANKDSETFSTMRDLTAGVVSKSYALQHLLPPHVAMAHQKGEIHFHDLDYHPFQPLTNCCLIDAKGMMAHGFQIGNAQVTSPKSIQTAAAQLVQIIANVSSSQYGGCTIDRVDELLSHYAKFNEEKHREVAREFVKSDQIDDYVDKRVTQDIADAVESLEYEINTLYTSNGQTPFVTLGFGLGIDELSRKVQTAILKTRIKGLGKDRITAIFPKLVFSIKKGTNFAPEDPNYDIKQLALQCAMKRMYPDILNYDKTVELLGDFKAPMGCRSFLPAWQNAQGEFENNGRCNLGVVTLNIPRIAIESAGDMTRFWDLFDERMQVLHDALVYRIERVKEAVPNNAPILYKRGAFKHRINEEDPVDTFFNQRRATISMGYIGLYEAATVFFGPNWETNPEAKDFTLNILKQMKNYQLEWTDQYDVWFSIYSTPSESLTDRFCRLDREAFGDIPDITDKGYYQNSFHYDVRKDVTPFEKLDFEKDYPYLASGGYIHYCEYPKLDHNVKALETVWDYAYDRVSYLGTNIPIDHCYDCGFEGDFDTTETGYRCPECGNQNPETVDVVKRTCGYLGNPVQRPTIEGRHKEMCARVKHLKVRQS
888437..888976                     PHAGE_Entero_EfV12_phi1_NC_048087: capsid decoration protein; DJ458_004285; phage(gi100066)     5.67e-43            StaphylococcuspseudintermediusMSVLDVSTGAGYIAKIEYQSFVDGEGVRCSVYVSGCPFQCQGCYNKAAQHFRYGEAMTHTVMEEVLDACAPEYIAGLSILGGEPFCNLKVVAPLVQAFRARYGREKSLWIWTGFLFEYLWRANDQRTEIIKQTDVIVDGMFMQKLYQPNLPYKGSLNQRVIDVHQFIKTKMMSQSIYIE
899781..899793                     attR                                                                                 N/A                 CTCCTTTTTATTT

#### region 3 ####
1667478..1667490                   attL                                                                                 N/A                 GCCATTATTAAAA
complement(1668100..1669146)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; DJ458_008045; phage(gi100027)     6.65e-75            StaphylococcuspseudintermediusMASFTVTKRKNKKSSSWQYDVKHPSFKSGKKRKSGFKTKAEAVNAAQQLIRDLEDGNAIDDKTFKEYYEDWLVIKNKKSLSKRQFYWYERAIKLFEEHFGNAMLIRNITRTEYQKFLNNYGENHTDETVRKVHGCLMRCIRDAVYDGYLKKDPTYNVEVRGSKPSRKEETKFMTIKQYEKLIEYFKTRNEESYIFLFILAITGGRYSDAINMIDIDLNEKEGIIHLRGTKSVNADRFVEVPQKDIKLIKSKLSKLPKRVDGKLFKLSHTAVSKSFNHAKKETGLEDDTITPYALRHTHTSYLLSKGIPIEYISKRLGHYNISITLNTYSHLLDEHKKEQGQRVRELFS
complement(1669420..1669764)       DUF3969 family protein; DJ458_008050                                                 N/A                 StaphylococcuspseudintermediusMLIFENKEQLEKFTLITIHGLFHQLKHNLISIENAEHIIFTPYMMEELSSLNVNSEIIDLIHKGTELEDLEAFDLSVQEAVSEFIKKTEKLLKNYQHVDFNEKILKDWNIERSI
complement(1669764..1670246)       hypothetical protein; DJ458_008055                                                   N/A                 StaphylococcuspseudintermediusMKNKIIVFILLLTFTISYSTNSAIALQEESIDSIGLEDNTINESLLDNMPDYIIEEEATIQPRVIGPIVKYVVKNGMTFYKSIKYAPKFPRNFRAVSGKTKHHNVNNKTLLAKLRKVEKGPWKKVYKDGYIGKKKVSVHYFQSKSGLVFDVKTKSGWSNK
complement(1670401..1670673)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; DJ458_008060; phage(gi100313)     1.04e-20            StaphylococcuspseudintermediusMSQNDLMILRSEMDKKEKSKGVMWLLWFFTGGIGGHRYYLGDIGYAIAMTFTLGGLGFWSLIDAFLISGRLRKKNEEIERDIIVDMGLGR
complement(1670755..1671210)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; DJ458_008065; phage(gi100029)     4.52e-83            StaphylococcuspseudintermediusMGKYEELLIQNNSIPIIETNRLPEFQSGLYINGQIFIKDDISTHQKHAVLAEEIAHYKYTYGNILDQSNMLNRKFELKARRLANESVITLQGLINAFNYGVQNIYDLATYFEVTKDFVLDAIQHYKQKYGLRTRYGKYIIEFEPLIIYKDL
complement(1671229..1671564)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; DJ458_008070; phage(gi100030)     2.29e-24            StaphylococcuspseudintermediusMTNFGKNLVTLRKRKNLTLVELTNQLNSRYNIKFSKASIDRWEKGTTSPSISHASALADFFDISLDELSGRHNLEIEQQDTMAAHFDKDGLTPEEIDEVNRFIEWVRNRDK
1672520..1672720                   PHAGE_Staphy_vB_SpsS_QT1_NC_048192: hypothetical protein; DJ458_008075; phage(gi100026)     1.05e-39            StaphylococcuspseudintermediusMDFENVKQDIKKLFKVQNGSQISKATGLPYQTVQDLRNEKTNLDDARLRTIEKLYNYQKQLEKENE
1673762..1675336                   PHAGE_Staphy_StB27_NC_019914: minor head protein; DJ458_008080; phage(gi431809708)     2.76e-117           StaphylococcuspseudintermediusMSDYWLERAQQAIQSETLEDAAKVAEIERIVAMMIADIYKNLLAYYAKLATAEGIDWREAKQIADKFDVEAFQMQAKAYVENKDFSDEANKELKRYNTAMYVNREQLLKHELGLIVTKGYAEQENVINKHLHDSVTRTLRHQAGILGADVHVKQTDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMGSHVMLRGRHPYEFVPEIRKKQQQTVANTKRLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYDKKVFKVKDMVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYRLRDNDGQAIDTNNTNYNEQEPVGLNKRKKNDDYRVDMKYIHSSEYRRKIDKISDNKELNRNIYQAAKEMLQHRDGDFREDLYGFDIKTGKQLFKSTDNNNEKSMVNYTKRIDKIVKSKPYQIVSVHNHPRSTLPSLGDLTAHHLRKYAKGIIVGHNGRLIVYSVNKDIDFDFLKYTLDIELERARIKNNIQAKIQKDMLENVKKYGFMEYQEI
1675356..1675544                   hypothetical protein; DJ458_008085                                                   N/A                 StaphylococcuspseudintermediusMGKVLDYVKLDKLRVKALKASKQTKAPDVEDMPYDGFTNPPEGLDELTDEEFDYLIFGIKPD
1675722..1676285                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; DJ458_008090; phage(gi100005)     3.54e-17            StaphylococcuspseudintermediusMKEQWLKLSLQFFNDEGTEEAVSDENVETEPTQEVEELSESQMKLVNERVNEEMARRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDYKQQLESYKMRQEAMAMFNDAGMQAPESLLNMVVQDTAEATKEAVDSFVSMVNQEVQRQLESKATQNHVAGNHVTTPNNNKNTPQK
complement(1676364..1677344)       PHAGE_Staphy_phiSa2wa_st22_NC_048681: tail assembly protein; DJ458_008095; phage(gi100053)     4.93e-169           StaphylococcuspseudintermediusMKISKVIKAATATSVALMLFSNPVYAANQITPVSEKKVDDKITLYKTTATADSDKLNISQLLTFNFIKDKSYDKDTLVLKAAGNINSGYKSPNPNDYIYSSFYWGAKYNVSISAESKGAVNVVDYAPKNQNEEFQVQNTLGYSFGGDISISKGLSGGLNGSESFSETINYKQESYRTTIDKHTDNKTIGWGVEAHKIMNAGWGPYGRDSFHDLYGNELFLGGRQSKLNAGQNFLPTSQMPLLARGNFNPEFLSVLSHKPNGAKTSKIKVTYQREMDEYTNYWNGFHWMGTNYKNQNNATFTSFYEIDWDQHTVKLIKTHSDEKNPS
complement(1677346..1678278)       PHAGE_Staphy_phiSa2wa_st22_NC_048681: tail fiber protein; DJ458_008100; phage(gi100052)     4.59e-146           StaphylococcuspseudintermediusMVKNKLLAATLSISLVLPLITPYSEEAKAANTIEEIGEGAQIIKRTEDVSSRKWGVTQNIQFDFVKDPKYNKDALIIKMQGFIKSRTSFTDVKGKGYESTKRMLWPFQYNIALKTNDPNVSLINYLPKNKIESIDVSQTLGYNVGGNFQSAPLLGGKGAFNYSKKISYTQKNYISEVAQQNSKNIRWEVKANSFNTENGQVSAYDRHLFVRSPIGPNARDFFVPNDELPPLIQSGFNPSFIATVSHEKDKGDTSEFEIAYGRNLDITYATFFPRTGIFAERRHNALMNRNLVTKYEVNWKTHEIKVKGHN
1682468..1682480                   attR                                                                                 N/A                 GCCATTATTAAAA

#### region 4 ####
1760647..1761264                   PHAGE_Staphy_StB27_NC_019914: portal protein; DJ458_008500; phage(gi431809707)       9.39e-47            StaphylococcuspseudintermediusMDLDVEEVKKMRKSRIILAKTKADASGRMGNANVDFIYKQYDVAGVEAYKKRIQKDIHKFTNTPDLSDENFGGVQSGEAMKYKLFGLEQLRSTIERQLTKGFKRRFAIIQSVRNQLNDPIDLSHMRIEYKPNIPQSLSEYADIFIKLGGRVSQETLLSWLPNIENPKEELEKVKAEEQEASENHDYHDAMTVQQEKADINNVELE
1761248..1762285                   PHAGE_Staphy_StB27_NC_019914: minor head protein; DJ458_008505; phage(gi431809708)     2.58e-115           StaphylococcuspseudintermediusMSNLSDYWLEWAQQAIQSETLEDAAKVAEIERIVAMMIADIYKNLLAYYGKLATAEGIDWREAKQIADKFDVEAFQMRAKVYVENKDFSDKANKELKRYNTAMYANRENLLKHELGLIVTKAYAEQENVINKHLHDSVTRTLEHQSGILGADVHVKPTDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQKQTVANTKSLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYDKKVFKVKDMVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYRLRGDEETKQLLAKKEMTDAIDSGKISLWKKF
1762270..1762662                   PHAGE_Staphy_SPbeta_like_NC_029119: ribosomal-protein-alanine N-acetyltransferase; DJ458_008510; phage(gi985761241)     1.70e-90            StaphylococcuspseudintermediusMEEVLIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCYTLLRPDGKTMFYLHSIGMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRACHVYEKLGGKNDYKDEIVYVYDYEKGDK
1762663..1763184                   PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; DJ458_008515; phage(gi985761240)     3.81e-119           StaphylococcuspseudintermediusMNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKKIVI
1763226..1764101                   PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; DJ458_008520; phage(gi985761240)     0.0                 StaphylococcuspseudintermediusMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD
complement(1764231..1765403)       PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; DJ458_008525; phage(gi985761243)     0.0                 StaphylococcuspseudintermediusMTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
1765466..1765840                   PHAGE_Thermu_OH2_NC_021784: SPP1 family phage head morphogenesis protein; DJ458_008530; phage(gi526118333)     1.50e-15            StaphylococcuspseudintermediusMAFLLLHNYTDFIKIKVELNPNKQNRHQLGHKLYEDYKKKNLQKGLPIPSYTELDNNELNSFIQQKTGSGRLIASDTGEWRNKEVIDFGKDIGKVNINGKFITTKWGIVHYSKTGTHVIPKKED
1765843..1766040                   PHAGE_Thermu_OH2_NC_021784: hypothetical protein; DJ458_008535; phage(gi526118332)     6.78e-06            StaphylococcuspseudintermediusMKLWTYVDKNVRVILKNGKEFNGRVSGYDDEVANDNGEDCIYLDVGMELLYEFRESEIKSIEVLD
1766224..1766793                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; DJ458_008540; phage(gi100005)     8.92e-17            StaphylococcuspseudintermediusMKEQWLKLSLQFFSDAGTEEAVSDENVETEPTQEVEELSESQMKLVNDRVNKELHRRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDYKQQLESYKMRQEAMAMFNEAGMQAPESLLKMVVQDTAEATKEAVDSFVSMVNQEVQRQLESKATQNHVVGNHVEAPKTDEAWKTFLN
1766808..1767059                   PHAGE_Staphy_80_NC_030652: hypothetical protein; DJ458_008545; phage(gi100038)       3.43e-10            StaphylococcuspseudintermediusMMKFNLKFNLQFFADDTASGGGTSSPTEATQTKVALGETKLKDKHTGIVKTVTDAKSYVTPALITDDAIYMEGRFVSHLMIHF

#### region 5 ####
1941428..1942852                   PHAGE_Haloru_CGphi46_NC_021537: hypothetical protein; DJ458_009365; phage(gi514051305)     3.68e-06            StaphylococcuspseudintermediusMFEEKHLWQTSFLWMRYLNYDCVHYEKDKNEVWLAHKKRQHVVIFKQGTFTTQELDFDKDRIVEHQKQIAEFLGYDIRRYDVYVLTDKSFNTVNFNVHEPLQVQFHSIHNVKALRNTTTHPIIKRKLGQKDSKSLKEYQKRVLNQNIVEKAMYRFTPITYAVVAINVLIWLIVTWFTPHHTDYEIINLGALAHFNVVHGEWYRLITSMFLHIEFQHLLLNMLSLFIFGKLVEAFIGPLKMLGTYILSGIIGNLISLALITTSLSLGASGAIFGLMGALIALMIISRRFDQKVILQMVIAVVVMASLTLLIQNVNVVAHLGGLLGGVLVVYSGYFFNQNRLYFYILLGISIVILTLICIKIFMTSDTNIYNQIIQREMHDGQYTEAKDMIKQTYQNGYADDVTYYLSGIIIATQDSKAEAMAEWERGLKYFPNSPTLNFHMAIANRSLGDDKQAKSYIQKAIKASPNNQEYQNLKK
1942868..1943071                   DUF910 family protein; DJ458_009370                                                  N/A                 StaphylococcuspseudintermediusMQTQLNTFYDVLQLLKKFGFIIYFDNKGDMLEMIEQEIQTLYRHELITRDEFVQSKLLINQRRMNKE
1943068..1944054                   ROK family glucokinase; DJ458_009375                                                 N/A                 StaphylococcuspseudintermediusMNKQLILAADIGGTTCKLGIFDKSLTQLSKWSIETDISDPTGEVLLKQIYDAFVHEMERNHYDMNEVVGMGIGVPGPVKFESGVVNGAVNLNWPQPVNVSEIMQQFVSFPVYVDNDANVAALGEKHNGAGKDADDVVAITLGTGLGGGIIANGEIVHGHNGSGAELGHFRVDHDQRFKCNCGKSGCIETVASATGVMNLVYFYYPKLTFKSSILPLIKEHKVTAKAVFDAAKAGDQFCIFITERVAQYVAYLASIISVTTNPKYIILGGGMSDAGDILIENIKTEYYHLAFTPSQQGTEIVRAELGNDAGIVGAAGLIKTYIIEKERI
1944055..1944366                   MTH1187 family thiamine-binding protein; DJ458_009380                                N/A                 StaphylococcuspseudintermediusMAIVDVVVIPVGTEGPSVSQYIAEIQTKLEEFKQEGKIDYQLTPMNTLIEGELADLFEAIQAIHELPFNKGLDRVCTNIRIDDRRDKQRKMNDKLDSVKKHLK
1944379..1945008                   MBL fold metallo-hydrolase; DJ458_009385                                             N/A                 StaphylococcuspseudintermediusMNISNLTLGFVSTNTYFVENDTEMILIDPAGEIDKIDKKIKQSGNQLIAILLTHAHFDHIAALDDVLTRYDVPVYMHAEEFSFLTDPQKNGSAKFKDYGLPIITSQAEPHALDEGIQRIGQFNIQTLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRTDLYQGNYETLVDSIKDKLFSLDEQLPLYPGHGPSTTVEDEYMNPFLDGQG
1945168..1945677                   type II/IV secretion system protein; DJ458_009390                                    N/A                 StaphylococcuspseudintermediusMQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEHKALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNIITIEDPVEQL
1945747..1945763                   attL                                                                                 N/A                 GGGCAAAAAAAGGGCAG
complement(1945765..1946988)       PHAGE_Staphy_tp310_2_NC_009762: integrase; DJ458_009395; phage(gi156603950)          7.22e-102           StaphylococcuspseudintermediusMWVEEYRDRNNKKKYRFYEKYKDPYTNKWRRVSIVLNKNTKQTQKEAILQLTEKIKIKKSVRPSEHKDITFKELVEKWFDFYKNTSGSKESWHNKIQHFINKLFKEVDGDTLARKVDRKIVQDLMIKIVSTQDFTESYARKINFVIKSSLEYARKEYEFDNTAFFKDVIIPKKEVDKEKLERQRNNYLEKDEMTKVLNEFDAMIKQEKRPKVKITLNLVKNICEVQALTGMRIGEVLALKNEDVDFKNKLIDINGSIYFKKTNGIDYGTKTTVKTEGANRKITVNDRVLTIIRRLQLRNRQFENWETGYINRGFIFTNTRGNPTHLNPILRHLKTVKEKVFENQNRNLTTHTFRHTHISTLSEMELPLKAIMERVGHVDERTTLRIYTHVTKTMRDRITTELEHFSF
complement(1947049..1947660)       hypothetical protein; DJ458_009400                                                   N/A                 StaphylococcuspseudintermediusMLIRKDENRSGCSGCFGCFGIVLLIILLFSGCSAIFGNSDEDDTEDTSPKTEDNSKKESETSDKEETTSSKEENTENDNSKTDLTDGEINTTPEDDTVYGKLSQPHGNNKIVNVDDTLYILNDNDEILQAEKSFSKLPLDKNLDKNLLNEHIKDYMAKDAEFVSNLTDTKQKYHSKSLNKDYYVQLVLDEHGNVNRLIISSIH
complement(1947707..1948168)       PHAGE_Staphy_CNPx_NC_031241: holin; DJ458_009405; phage(gi100034)                    2.41e-38            StaphylococcuspseudintermediusMSKYEELMKKHSHIPISDNYKLKGNFKGIFANGAILIDKDLSNFQKHAVLAEEIAHYKYTYGNILDQSNMLNKKLELFARRKAYESVITLQGLIDAYNNGISNIHEMADFFEVNLDFAQECLKHYQMKYGLYTHYGDYIIRFDPLTINKQLSD
complement(1948182..1948493)       PHAGE_Staphy_phi2958PVL_NC_011344: probable transcriptional repressor; DJ458_009410; phage(gi209363558)     3.02e-39            StaphylococcuspseudintermediusMKPDIKARRLELNLTLEQVGNMVGVGKSTVRKWETGDIENMKRDKIVKLAEALKVSPSYIMGVEDEKPQQNTLAAHLDGDYTEEELAEILEYAKFVRQKHRNK
1948669..1948896                   PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; DJ458_009415; phage(gi209363559)     2.65e-10            StaphylococcuspseudintermediusMDANKLKAEIVLKGLKPSELLEKMQEKGIKMSKASYYRRIKDFDKFDRAEILAIAEILELNKEQILDIFFDAKVS
1949093..1949275                   hypothetical protein; DJ458_009420                                                   N/A                 StaphylococcuspseudintermediusMIDIRNNLKLLIESEIDDIRIPALVLKTIKFFLEEQISTEDRIKIIRMLDAMYRKGDNAN
complement(1949299..1949790)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; DJ458_009425; phage(gi939535487)     7.68e-20            StaphylococcuspseudintermediusMSFFQSPLISNIIAFGALICSIWSIVYTYSQNKYQITISEFTAEKFEDIPLYFCFDVINTSTKGIRIKKIELIKNGEMLNDLQFEPTKRLVFYYPNPSNSPLYSKPFKTESFLAPQSSKSYKYHLNEIPDSIRICADKPFYRFKKNKLFIINPDDIEQYNESH
1949852..1950115                   PHAGE_Staphy_StauST398_2_NC_021323: putative DNA-binding protein; DJ458_009430; phage(gi509139890)     2.29e-40            StaphylococcuspseudintermediusMPKIINIPTPENTFLGKEKFVKKLYAKPSNIHTMFDVSRSTIYNWLRDYNKDDLGVKNLYIDYSSNMTLINIAKLEEYLIARHKKWM
1950308..1950604                   PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; DJ458_009435; phage(gi122891727)     2.59e-06            StaphylococcuspseudintermediusMEFKNMTEEQIIEVVTAKSRELYDLIVKIDEETDVNISFIAGIALEKGIVQNIFNQIVVGKPLSISSMLINADNFKKIVEPTVAIKGLRDYFGNKKKD
1950691..1950948                   PHAGE_Staphy_SA1014ruMSSAST7_NC_048710: hypothetical protein; DJ458_009440; phage(gi100017)     8.35e-08            StaphylococcuspseudintermediusMYFKNDGEYTSIVEINGFKFKKIVMKEDSRVTVEVLDMDLNTVSFISVYDSSEIEDAEEVILADVYKYIENESDELDKIVAHFIK
1950964..1952909                   PHAGE_Staphy_PVL_NC_002321: hypothetical protein; DJ458_009445; phage(gi9635206)     3.39e-110           StaphylococcuspseudintermediusMHLRLNKLTIENFAGIKEQSFEFNGHNSKIYGANGTGKTTTATALQWLLFDKGLDGSTKSFNPVPLNANNQEQYELVPTVEAEFTIGDHTLLLRKESRPKYTTNQKTNRKEYSRSRTKRQYINEEPVKISDYKSRIKDVIDEDVFKLITNPAAFNNLDWKKRREILFEIADPINNEDIINSNHELKGLSDLLNDHDIETKKKIVSDKIKQINKEIQDIPTRINQESKGLQEVEPLNDSELKQIESEIEVLKQERIEVRNGSKSIELKISTKKRNYQDNQIITLRLITRFTRSQMNLMLNKVQCITLLKFVCIIRKLSMKKRDVKLYCLITKLKRISKSYRINNLNILQQIFVKLVARNCLQNKLNQNKKHLKNSIKKKHMIWKSQNERTKRWQKGKRLSQSLKKYNLKLISIKNMLKMHLKNPKKSKWKLMNSKKNKQMQKQKRIELLFQKLKQLSKNNKIFKSQSQLQYLMNRLMIFMLKNLNLMSVLLNLISIQNNALKSFAQKKIICWMKKKNTLTNFISTYSQQPKTCLRIILTKNLIWPNLSFSISTVNWKKRVSLLTVLNMVAVTTLHVLMSVTSLTRYVDITTSQRRFLSTMPNRQTLSTQTRNKYSLCLRITGSWNVAA
1952903..1953103                   PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; DJ458_009450; phage(gi100064)     3.77e-06            StaphylococcuspseudintermediusMLKNKIALNIRAYRKMCKLTQSELASRLKTSRQHISEIECCKRGLSIKMLEKIAKKLHVEPYQLLK
1953117..1954031                   PHAGE_Staphy_SA780ruMSSAST101_NC_048711: hypothetical protein; DJ458_009455; phage(gi100019)     2.74e-175           StaphylococcuspseudintermediusMSNELMQRVEAQLLEEKNVSDNVLNKVRVLEAQGNLELPADYSPSNAMKQAWLQISQDNKLMACNDASKANALLDMVTQGLNPAKSQCYFIPYGNKMQLQRSYHGNIMMLKRDAGATDVVAQVIYDGDTFKQELDSVGRIKSIKHEQDFFNINKDKIVGAYCTIVFSDNRDNYIEIMTIDQIKQAWMQSSMIKDEAALNRSKTHNNFKEEMAKKTVINRAAKRYINSSTDEGLLQFAKESEQRQRKEVLDAEVAENANKELLDFDENEIEDAQFEEVKSVDGYKDVTEVETSPANESESEEDPF
1954094..1954738                   PHAGE_Staphy_IME1361_01_NC_048657: hypothetical protein; DJ458_009460; phage(gi100020)     9.79e-78            StaphylococcuspseudintermediusMLVEAGIKFQSVQKHLKFKTRDIAGCLITHEHGDHAKYIKQFMDAGIECYATLGTLKALNVTSHRLNVIKSRKVFRVGSWQILPFEIEHDVAEPVGFLMKSDNGSKVLYVTDTKYLKYKFNGITHMLLEVNFIYEQMQQNVEDGVIHQALANRIMDSHFSLEYATQFLKANDLSELQEIHLIHLSSNNSNARFIKEQIQAVSGVTVYVGGYKDD
1954731..1955192                   PHAGE_Staphy_SA12_NC_021801: single-stranded DNA-binding protein; DJ458_009465; phage(gi526178045)     1.14e-67            StaphylococcuspseudintermediusMINRVVLVGRLTKNPELRHTQSGTSVCSFTLAVNRTFTNAQGEREADFINCIALKKTAENIINYLSKGSLAGVDGRLKSRSYENKEGQRVYVTEVICDSVQFLESKSTNSNQSQGGIASGQYQPKANHVAATSQNPFVNMNDSIDISDDDLPF
1955207..1955614                   PHAGE_Aeriba_AP45_NC_048651: hypothetical protein; DJ458_009470; phage(gi100021)     2.84e-23            StaphylococcuspseudintermediusMRLNNVKLSELGQGALQELFESELEKVIENINDINTDPTKKRKITMTIDIKSDEYREIIFADAKVKSNLVSMDSTGIKLFNIVDENGERVVNELRSGAKGQAFIDDDGSIKNDDGSDIDEKSKTKKTSKVHQIYR
1955630..1956349                   PHAGE_Paenib_Vegas_NC_028767: hypothetical protein; DJ458_009475; phage(gi971741644)     1.53e-59            StaphylococcuspseudintermediusMIKEALAYLKNEFKKTEFYEVGKETYANENLQKIEEPVRREVVVYSLSGLVDYIKDNFDNDERLLVSVLNQQKIVVETQLNNNKKREIVIMSLAYTPTICLDQFMSLEAFNIQLQSIFVKNDDVKKLLRILGNLRSSNIRNAGDNGVSQIVETKRGVTMAQEEVVPNPVRLKPFRTFTEIEQPESLFVFRLRESGNEIQAGLFEADGGAWKNIARLSIKDYLIENLKEQIENNSILIIG
1956398..1957165                   PHAGE_Staphy_StB27_NC_019914: DNA replication protein; DJ458_009480; phage(gi431809696)     1.23e-57            StaphylococcuspseudintermediusMMAGWISLHRSIEEHWLYPNERPFTELEAWLDLLLTVNHRDNKTLFDGKLIVVKRGSTYTSLRKLSERWNWSTTKVTRFLKLLEQDNMVTQKKDSRKTVITVVNYDVYQNMNIEKRQQNNTEITLKKQKDNAEVTPKKTNNNDNNVNNENKENKDNKRQSVFSFYQENGFGVLRPYIADQISGWLDDFENDGEEIVIAAMQEAIKNNVLTWNYVNGILKHWTKDKVKSIEDVQTLINQHKKQKDEFDNSQYRDLF
1957180..1957962                   PHAGE_Staphy_DW2_NC_024391: DNA replication protein DnaC; DJ458_009485; phage(gi658608046)     1.23e-115           StaphylococcuspseudintermediusMKSIQQLAAKIESKSKIVEQKLNVKCEKCGQSYDYVKFDNGQIVKNGCDCEMKALARKQTANYHKKINRIKVNKVFKKSIINDDLKDATFDNFEPTNKNLEKAKKLCMRYANNFDIDNKQSLMLYGTFGTGKSHLSMSIVKVVKAKGYSVLYMNVPQLITTYKSTFNNSKMTERDLDKIIADVDLLVLDDYGTTLSNFGVSKMFEVMESRTGKHNVITTNNSAKELTTNKDYSKLFSRIMKNTTIVKMNGEDYRLRGVRF
1958479..1958730                   hypothetical protein; DJ458_009490                                                   N/A                 StaphylococcuspseudintermediusMYIKHYEYVVYRGEEIICAGTKDEVITKLNTTKNTLDRIASSTTEREEAELYKKNPHHQRLIAVKIETSEIEKELGLQKVKWA
1958727..1958984                   PHAGE_Staphy_P1105_NC_048636: tail length tape-measure protein; DJ458_009495; phage(gi100057)     1.72e-15            StaphylococcuspseudintermediusMKLTDKAQVKAYMKQFFGSKRYLYRNGRKVAHIHIVNGIYHFHGHFKTKFSRLKLEFNANKTSMTILRNMNYVLRSDSDGVKQFR
1958962..1959147                   PHAGE_Staphy_2638A_NC_007051: ORF074; DJ458_009500; phage(gi66395495)                5.37e-23            StaphylococcuspseudintermediusMELSNSDRQRYRIKTSGKSPTEINKELRKRGVRGFVVNVDPEEVTMLVEKKDKRHNKECMR
1959144..1959494                   PHAGE_Staphy_vB_SpsS_QT1_NC_048192: DNA helicase; DJ458_009505; phage(gi100044)      1.34e-51            StaphylococcuspseudintermediusMIPKFRAWDKTENVMLGVHRISFLHKYVELENGGFRVFNEVALMQSTGMTDKYEDEVYIGDIIWDDMHDEFGVVKLSEAKAIIDWDYIEEDLFENIDLLEAIGNIYENKDLLQEER
1959494..1959889                   PHAGE_Staphy_phiIBB_SEP1_NC_041928: DNA polymerase III alpha subunit; DJ458_009510; phage(gi100121)     4.02e-23            StaphylococcuspseudintermediusMKIKKKVKMNLHELIQWAWENDVKGKTFKSNRGKKVKFYSIGGFNVLEPIWGHDTFTVEVEELITERTVIPLFLEVYEYEGELVFLPQKEKSIKDLLEESDLEESITTKTLYIINDDGTLTLVWKDGEMVE
1959886..1960248                   hypothetical protein; DJ458_009515                                                   N/A                 StaphylococcuspseudintermediusMKLTVYDLTNIKNDIRKYLISESDIYVDGDKLYDVVVEIGDYKPERDTLINDLTNLRKQRDNYKSRAETLDNLKEYLSEARTLNIKCLEKMSEGYFKGKVAGRIQMIDELITVIRILEGE
1960249..1960569                   hypothetical protein; DJ458_009520                                                   N/A                 StaphylococcuspseudintermediusMAKKHKVAVYELKDSQGEYIAKDMDIGITTNLSDAYAVWNIDGSDPNLKNIKELAKAKESDWDNFYKVNYGPNAINNYKPYTWLQHCNLIIVEIDEETFNSIKGEN
1960532..1961104                   PHAGE_Acinet_IME_AB2_NC_041857: capsid decoration protein; DJ458_009525; phage(gi100066)     9.19e-20            StaphylococcuspseudintermediusMRKLLIVSRGKIKMEQLINNIEQWSTERGLHEGSPIRQFDKLVEEFGELVKGQNKQDKEMIKDSVGDMFIVLTIMVQQIKKIMKIEDSDPLMQSAVIFSYILRDVELSTVDYILTLGELGDKLLVFTEERTDLVSLSYILTKITDLIALLDVTAHFNNTDIKTCVQQAYDEIKNRKGKIIDGKFIKEADL
1961125..1961568                   PHAGE_Bacill_vB_BsuM_Goe3_NC_048652: hypothetical protein; DJ458_009530; phage(gi100203)     1.78e-30            StaphylococcuspseudintermediusMKSDNTLAAERYLYNLLLKGKLNVYGCHEVTIGIEPLKKGREIVDFLTYDSKNVFRAYEIKVTKEDLKSTAKLSFVGHYNYLVLTEELYEEVKDTNLIPFNVGLVVVGKGLIKKSGRKTLSMSDNIKLLESLMRSLNRENKKHKFIF
1961693..1962106                   PHAGE_Staphy_37_NC_007055: ORF044; DJ458_009535; phage(gi66395771)                   9.79e-50            StaphylococcuspseudintermediusMIELIQMYRKNELEIKSLKLRMEICIDEIENWGAYNANNDKAKLGKKHDFLTRIKQTDNVIDEFNVIIERLQTLKSRQKKIREVIDNFDGLEHKILKLKFIDGYKIAEIANQLGYSEQYIRNKHSELMKRIEFKNVT
1962390..1962725                   PHAGE_Lister_LP_101_NC_024387: putative HNH homing endonuclease; DJ458_009540; phage(gi658607880)     4.99e-27            StaphylococcuspseudintermediusMSLTKQQRRTFYNSMAWREKRADIMRRDHFECQRCKSKGKVAIDEYELNKNHRKKIKLVVHHIKELADYPELCLDDDNLETLCVECHNEIHDRNFKSNFKNKIEKWDDEKW
1962863..1963162                   PHAGE_Staphy_vB_SpsS_QT1_NC_048192: methyltransferase type 11; DJ458_009545; phage(gi100001)     1.80e-25            StaphylococcuspseudintermediusMKNKAKIKKYLLNKIDSSNPVQVEKVDRYLNLLTIFYELDKEIESKGLMVETVNASQIFLKPNPAITEKNKVNTSLLAIEKSLGLNKIDEEPVTRRDLL
1963159..1964799                   PHAGE_Lister_LP_HM00113468_NC_049900: hypothetical protein; DJ458_009550; phage(gi100003)     0.0                 StaphylococcuspseudintermediusMIRNVHVDEYIEMWKSGKIILNKERILLIAYIEKYILSRDDLYFDEVQIENFIKFTEKWYFPLQPFQKFIIPFIFLFEKEGDFLYYEQFFITLGRGGGKNGLITALSNYFISYLHGVPNYDISVVANSEDQAKTSFEEAYNMIEKNKLEDVFHKTKSVITDIETKSRFRFRTSNAGTKDGGREGCVIYDEVHRFEDSETVDVFSSGLGKVKWPREFFIGTDGYVRDGFLDKLKERSMSILNGETPDDRLFPFICKLDDASEVENSEMWEKANPMFSKPMSHYARGLFRKVKNQYNEMSFSPTKRQEFMTKRMNLPEVDLEKVVAPWEEILATNRPLPELERKQCIGGLDYASIKDFAAVGLLFRDGENYIWKSHSFVRKGFLDTVKLKAPIHEWEKQGLLTIVDEPSIDPLHIVMWFDMMRETYGLEKVVADNFRMDLLRPYFEDYDIEIEVIKNPKAIQSLLAPRIETMFANHRVIFGDNPLMRWYTNNVAVKTKPDGNKEYIKKDEVRRKTDGFHALVHALYRADELLEVDINESLDFLNAIDF
1964814..1965968                   PHAGE_Staphy_phiBU01_NC_026016: portal protein; DJ458_009555; phage(gi744692791)     2.02e-144           StaphylococcuspseudintermediusMGLFDSILKRNKELTWMYDLDMFEDDTTNAYLKRTTLQTCIEFIARTLSQTEFKITQDHKTIKDESYYKLNVRPNTDMSATDFWQKVVYKLIYDNEVLIVVNDTKDLLIVDSFERKKFAMYPDIFKHVRIDEYEFERSFNMDEVIYLTYNNNALNSFVNSLFEDYGAIFGRMIKAQMRNYQIRGVLKIDTSKVGKSGEQDKVQEYVNKLLKVFENNAVAVAPLTNNFEYQESSNANKGNAAPFSEIANLKKAMIDEVAKALGIPPSLIHGDMADLENAMESYIKFCIKPLLKKFEDEFNAKLIKKEDLLNGKCIKAISIDKRDPLEMAEAIDKLVSSSTFTPNQVLILLGEEPSDDPEMDKYYITKNYTTSNDSAFKGGERDED
1965958..1966680                   PHAGE_Staphy_SA345ruMSSAST8_NC_048713: DNA adenine methyltransferase; DJ458_009560; phage(gi100041)     9.02e-80            StaphylococcuspseudintermediusMKINIKGAIVSNDDKWLYEIFGMEHTAPKDVIDALPKNNEDIEVIINSGGGDVFSGSEIYTALKEYQGKVIVKVYGVAASAASVVAMAGDHIEMSPTAQMMIHNASTLAYGDNRNMNSASKMLSSTDKGIANAYVKKTGMSEEEILNLMNDETWMNAQEAVEKGFADAKMFDDAAPKIVASFGQVISEDAKKRITALMSKTPEVNIDMDKIVDKVIEKLGVKEKELKKPEAKKGFGKFFF
1966709..1967836                   PHAGE_Staphy_phiBU01_NC_026016: capsid protein; DJ458_009565; phage(gi744692789)     0.0                 StaphylococcuspseudintermediusMVIKLSNEFITARQELVNAIKNGESEEVQAKAYENMLNELVEEAKRQAKLEAERVTDLTSADKQLNAADRKFYNEINKEVGYKEEKLIPQETIDRIFENLTTAHPLLAAIGLKNAGLRLKFLKSETKGQAVWGKIYGEIKGQLDAAFSEETAIQHKLTAFVVLPKDLTDFGPAWIERFVRTQIEEAFAVALEAAFLGGTGKDMPIGLNRQVQKGVSVSDGVYPVKDVTSTLTFKDAKTTVLELTKVFKYHSTDEKGKAVVVKGNVNMVVNPSDAFEIQAQYTHLNAQGVYVTALPFNLNIIESVAQEAGKVVTFVSGRYDAYLGGGIKVMKFEQTLALEDLDLYTAKQFAYGKARDNKVAALHKLSLATQAGSPS
1967905..1968201                   PHAGE_Lister_LP_HM00113468_NC_049900: tail tip protein; DJ458_009570; phage(gi100054)     7.39e-18            StaphylococcuspseudintermediusMISDDILKQFKSRMHIFHSAEDERLRNDLQISYEILQRDYGEFDIFTNIMGKELVFERTRYVYNEQLQYFLKNFSTELVNFGLENVVMKEDFDGADKL
1968182..1968544                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; DJ458_009575; phage(gi509139919)     6.74e-25            StaphylococcuspseudintermediusMAQINYKRKKLQSGDFRTPATFHTYINRGPYPEDVELEQVYQCFVETYSPSIKDMEILDVAGHLTGLTMVMRDPLQSYQPRNEHVVKIEDYRLEVNTFNIKAVRLDTPERGFITLVLMQQ
1968541..1968942                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; DJ458_009580; phage(gi509139920)     9.88e-71            StaphylococcuspseudintermediusMSVEVKGISEVLKKVESKYGKRAMQQIADRALNKASDFVVSNLKKEFESFKDTGASIEEMTKSKPYTKASDHSRAILIQWQGPMNRKNIIHLNEHGYTRDGKSFTPRGFAVIAKTLAASEIIYRKITKKELSK
1968944..1969339                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; DJ458_009585; phage(gi509139921)     3.46e-64            StaphylococcuspseudintermediusMNILNLVKEIIMSDDQLQFYLQSRIYYYRVTENADVSKPFVVLKPILDKPFDFVSDKYLSESYLIQVDVESTNHQITIDITKRIRYLLFANNLVQASSQLDEYFESTKRYIMSRRYRGIPKNQYYKGEHIE
1969379..1970059                   PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; DJ458_009590; phage(gi509139922)     4.40e-108           StaphylococcuspseudintermediusMGSYVAGFKRLHVGLFDEDAKKVLKKFIWEDENGGTVNMNVTGLSPDMVDMYASNKRVWMKKQGTNEVKSDIDLFNIPSDDLNAVLGRSKDSNGSAWVGENTRAPYVTIVGESEDGMTGEPVYCALLKGTLSLDSIEFKTRGEKAEAPETTKLTGDWMNRKVEVDGKTAGYIYAYHEGSAGADEFLNKVFVGFDGTTTLSVATTITTPTDTPIATVTNSNAASVLP
1970154..1970615                   PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; DJ458_009595; phage(gi509139924)     6.31e-45            StaphylococcuspseudintermediusMVRRLKLYTNGELKDTAEGEGRLTVSISGLEPATSYPAGIYQVCFEENGKESEKVDSPAFTTKPILVTSVTFTPENLSLVAGDDDVAVATVTPSTASNSEVTYTSDHPEIVTVDSEGGDLHAVAPGTATITATAKDSTHKTAHMTVVVTAAEE
1970723..1971073                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; DJ458_009600; phage(gi509139925)     7.34e-34            StaphylococcuspseudintermediusMIKFEITDKKTGKTSTYKKDGITIGEAEKFYETIEKMNKEAEKENATSKSIRKIERSFFVSLFEDQGLTEEDVLNNMTTRTYKEASNAIFREINAEDEEASKVGTDEAGKTEKQSQ
1971284..1976869                   PHAGE_Staphy_StauST398_2_NC_021323: tail length tape measure protein; DJ458_009605; phage(gi509139927)     0.0                 StaphylococcuspseudintermediusMDEKLQGLTLELGLDTLGMQEGMKGLKRQLGVINSEMKANLSAFDKSEKSMQSYETKINGLNQRLKVQKQMFNQAETELKQLNANYQSAKVNIKGVEKAYLDLAEANKKNKAALDKSNMSLKESVSELKKSEAQYKRLNQRKNDAYQKLKLLKQAEKDLKNSNSATTLELKRANEAVQKQIAKHKELVARYKDESLQIKKLREEHQKLSSTNQSVKDAYDKTNIKLKQTQFEYKELNNTIKNHHSNLATAQKAVNNEKASLNGLERAIAKTTNEMKAFNKEQLLASSHFNKKANEVDAMANTFNQKGDKMHSLGRNMTLGVTTPIALGFGQALKTSADFEAQMSRVGAIAQASKQDLKAMTDQAIDLGAKTSKSANEVAQGMEELAALGFNAKQTMEAMPGVISAAEASGADMSTTAKVMASSINAFGLEASDASHVADLLAVAANESAADIQYMGDALKYAGPPAKTLGVTLEDTSAAIEIMSNSGLEGSQAGTALRASFIRLANPSKATSKAMEKLGIHLSNAKGEFVGMGPLIGQFQKSLKGMTQEQKLAYIATITGNEAASGFLALVEAGPDKINAYSKSLKNSDGASKKAAAQMKDNLKGALEQLNGAFESLSIQVGKDLTPMIRGGAEWLSHFVEDFSKLPNWVRKGSVGLVLFGAAIGPVLLAGGLLIRTIGSAAKGYASLNRQMALNSTEAIINAKANEKAAGSILKNSKATKRTKGLFGNFGNILSIVTGRFGGLAKVTKVGIKLFGKVGLPLTILTTLFGIAYEKMGWFREGFKDMGRIIVDVGSHINFNWIHDLSKAWDHFKTDAAKGLEKGALFKEIHKLFDGIHSLASKASDKVDVLGKGVSKQTKKALSTYIKYADQSNKIFEKIRYNHGKISEKEADELIAINTKLSDELIKQLEKRKARELKIDEDVLKDTKVISDKRKKAILKKVEEEGNTRIQKAKELNAKIDEFETKALSDNKLSEKERFELKILYTQRNELAVKELSKGEKEQQRILSRMSANRKAMSIEEASEIIKESIKASDKAKKEAKNRYDSRVDEINEMVGLSKTEKEKLLKEADDRYKEEKDKADKHHKDILDGVKQSNKDVEKEIDLSNGKVKSGFDKVWEEFKIGASENWGKFTHDLKEGWSALVDTFNDYGKSIQGVGDWFSDLPEKTSKWFEKTSDEISNYTSDMYNKAKTKFENMKDSAWENAESIYNGFKDWLGRTLEWIRGFGSDIEEAALDLGKGVANKAIGGLNGMIGGINKISQAITDKNLIEPIPTLSTGTYSGTSLATDSEGGLMSPTLAIVNDRGSGNAPGGGVQEVIHRADGTFHIPKGRDVPVLLGVGDSVINAHDTYRMQRMGILPKFHTGTKKKNWFDEIKEKLGKKVGNFGAKAKDTAHNITDGAEKIVDAVTDKIKDGASWLGDKIGDVWDYVQHPSKLIEKVMSSLDINFGSGNNATVKMAKGAFIHLKNKLVDKVKSWFDDFGGGDGHYLFDYPIWQQFGRYTGGLNFNGGRHYGVDFGMPSGTSIYAVKGGIADRVWTDFGGGNSIQIKTGANEWNWYMHLSKQIARQGQRIKAGQLIGLSGATGNFVKGAHLHFQLMRGSHPGNDTAVDPIQWLKSLKGAGGSGGDGYTNARNAILKAQAILGGPFRASYITDEMLRVAKRESNYTSDAVNNWDINAQRGTPSKGMFQMIEPSFRTYALNGHGNMLNSVDEAIAAIRYIVGKWVPIMGSWRAAFKRAGDYAYENGGLSTTHKLAQISEGNKPEMIVPLTKRTRAIQLIEQAMRYVGMESGSTHMTFNHDNSLVESLLKQLLLLSDENNKLTEKLIYILSQPSGKPDLKGAEKLLSALAGNRNNQLSYMQGGD
1976872..1977696                   PHAGE_Staphy_StauST398_2_NC_021323: phage tail tape measure protein-like protein; DJ458_009610; phage(gi509139928)     2.79e-116           StaphylococcuspseudintermediusMYERWLKIIDNGKEELINESAPFFFLDANMDFPNANENDVTIAGVDGVLPGSLSYAPFNLILRFGLDAYDLEEFWLYEHMLRSKFSRRKPFTIIHSQLPGVKFDISKCDISKNIKDGSSCEFEVTCKVYKGYYESVYETDTEFKMNEGWMLESGIPLDFTPKYKHKSKSFVIWNGSTDTIDPRMHHKLKIYIQLTASKGFELINHTTGDVFKYKKAIEKDELVLSSVYAYRNGERCGIDTNRGVITLAPGKNDFEIKGNVSIEKVQFKFPFIYR
1977706..1979271                   PHAGE_Staphy_vB_SauS_phi2_NC_028862: endopeptidase tail family protein; DJ458_009615; phage(gi971750148)     0.0                 StaphylococcuspseudintermediusMIHLAVQNIENTIAENLLEVDYGSFKDTYSKNEARMIEFDFYKTESNAVIFQLLICENFILYQGTRFVIKQAVPKIAEGKTVVSITAYHVMFEFQGHYIDTPEDENDEPDEKEKTYLLKEALDIVFRDQRQTLKFTYKIHGDFTKRKAVGVFGQNGIEAINNIAEAFDCVIYPKDSEINFYHPDLFYKSTEEIIRYRYNTDSIQASVSTLELKTAVKAFGKKLEKKDTKNYSPLKPEDFTYSSDFHKEKTWGTDVVGGRATVSVKCRFGNETIRYTIKKGPNGGLFDAFIDGQKIGTFSCWAKDVESKTIDLKKNVSKGVHSLEFVFIGADPEHAPPKKKKARFLVGTSKRNVINLIANLRGEDLYSAVVDYKAESSKRFGVKYASTLTNDNISDVKELEKWAAAQIQSEPKTELEVNYVSKTKLTPRDKVFFVHEAMGYNTELKVIRLERGHPLANSIDTVSFSNNTVDMVQIQRSLNKRLKKQDNLFNYQSKVLNKIQSKSNLKPFTTETIGSVLDDED
1979258..1979458                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; DJ458_009620; phage(gi509139930)     2.02e-07            StaphylococcuspseudintermediusMTKIKALYENNEQFYPLTHVEAVKGLKNASEEKAGLMSKEDKRKLDNFNEAGSSNLGSVFYKEIRK
1979465..1980085                   PHAGE_Staphy_187_NC_007047: ORF019; DJ458_009625; phage(gi66395234)                  7.28e-97            StaphylococcuspseudintermediusMPNITKARTITYDGEEVYVRTHIDVVDGLDKSMLLTPELIEKINDIDGSDIPDSLTNATPEKAGLMSAEDKRRLDELKTNSNPYNKTVSDSTTTASNTVIAADINKWPNNTQVVNLSKRVSECRNGIVLVWRSDATDDFYHYQYVPKNHVKTHSAAKIVHLIPTNSANEFCTKTVLIRDNVVTGTDDNHNRTTKANKVRLHEILEY
1980097..1981128                   PHAGE_Staphy_187_NC_007047: ORF008; DJ458_009630; phage(gi66395223)                  1.04e-171           StaphylococcuspseudintermediusMNLITDLSNKAGAELRTQLIYNFKELQKALKDQDSKVIEKKISQKVSKYEYDMKREIRAIVLPEMSPLQITDDYAKSLTDLKGEQHESLKGRLDADLKYIAKKSVKTSIDDRFIVTENGTVFADYLSMSNTIKSVKKIGVIGDSVAKGSRATKNFGKYLAEMLGATVQNEGVSGATMSTVKANSIYEQAAKIRNKDLVIIQGTDDDWLYNGSAGVSIGTNKTNVKTFYGAFCKTVELIKTNNPHAKIIVMTATRQLPVNGTTIRRKDTDKNSIGLTLEDYVNAQVLACTELNVPVFDAYHTNLLDPYNPAFRVKNMVDGLHPNEKGHEVITHELIKNYFYFYG
1981145..1982416                   PHAGE_Lactob_phig1e_NC_004305: minor capsid protein; DJ458_009635; phage(gi23455814)     1.02e-21            StaphylococcuspseudintermediusMANQDLFYDITKQGTEQEKQQHLISRVGDGGLKTVTVTVWSNGTPYNITGLTPVFEGVKPDGQRIIDTRGAIVLDPVNGVFRYTFPHQASTAEGEYKQAFFKLKRGEQTDSTLEIKINVLKNMVEFGINSESYYTEYQQKVSELEVKINEYLEQLKTKAAGTEAQVEANANLVKGLKQQLDLIQSIANERELMTRGEFNEAINTVNNTVDTISSNFNTFKRDSTEELNRFKGEVTGVKTGVLDDVANITKSGVYYFDATTKNVPTRNTNNSNGYIQAVMKDENNGMITMLGAGYSIEKYRGQLHGRWVSSVPVKLWSGHLVKGQTATLTGNCHNFGNLLIEVSYTTNRHGTELVSIPSNGNLVYLNNYGMKSSGDGFKAGYLDEVVIRIKDDTHILLEKTLRAVGDEKATNSDAYITGIYGIY
1982487..1984487                   PHAGE_Staphy_GH15_NC_019448: putative lipase/acylhydrolase domain-containing protein; DJ458_009640; phage(gi418487944)     1.51e-139           StaphylococcuspseudintermediusMNYKYKDIHANINELGVDIGYIGANFYSKDVGTASIRINIFWNGQPFDLSNANYQPQLNLFCEDGSVFMDEPLEIISPYSGLIQYKVTDKVIRHSGKVKAKLFLLNENTSIHALNFMFNIVDSGIDQTISKEVNVDLVYTAIKDALKSKLFDMDELKKVMSDVVLDNKDNLKLDEPKKSSMFEGKTGVFVGDSITEKNFRTTTNYHEFIASRTGLNVINMGISGTGYQDRKNVALQIKEQPDFICVFLGTNDYGLVGDKTNPLGTVEERDYRTVAGSIYFTLLQLTNHFPNTPIVVMTPLPRIECYPLKEVANDAGYTLGQLVDVIKNISKLFGLPVLDLYHESNLRVWEPAVNKTFFAYEEGQEDGLHPNEKGHEFISNSIQSFLEKYAVSPKFENKVDLPPDQVLENGTVVKHLYPTGIFWKENQSFIINFDESEISLDNKKILKIESQKASILNASGTLQNSPYWYTIPNNTDEYNRVADVTQFTDSLTKTGYTTERGFEYLPELLKVTYADDANNSVVAEPNSNSTEAEDTSEVAASNDEISNDNIAPTEEAVNPIDNGDGTYIASVVPNRIFRDPSGLFGIAINRTALNLEDKSVVKIELGNEVLLNPEYVPNTIYWSGVNGRSTDEVERFISHLVIRGERNPGSAQEFKNQAIKITYRNN
1984502..1984930                   PHAGE_Staphy_StB27_NC_019914: holin; DJ458_009645; phage(gi431809723)                5.64e-59            StaphylococcuspseudintermediusMISFTETEIFKTFFYAGEMKLLYFLMLLMVLDVITGLAKAVKNKKLWSRKSMFGYARKMLIFCIVILANIIDQILNANGGIVMMTLFFYITNEGLSIVENCAEMGVLIPKQIAEKLAVIGNDDHKSIIHELKEEMSDTTKKR
1984943..1985890                   PHAGE_Staphy_SA11_NC_019511: hypothetical protein; DJ458_009650; phage(gi422935746)     1.66e-101           StaphylococcuspseudintermediusMAKEKIGTWNGVPVYTDFLPIGTRRSGQRLVSGNPKFAVFHDTGNRDSTAQNNVDYYRNTYNIDWAYTASAHVFVDDKECIICIPVTEKAWHVLYDTPIDNDWYGDDANDIAFGLEACYFSDEDRTLKSLDNACRIMGALCNSWDINPRNEMPGHQDIQFDKQDPGNILEAAGYGRHDMHIIDDLVVKYMKGDSPAPKVAKTVSKPKQGKPPKTVWAWHGIFTASDDNDDAIVVRRAFGMDAEEVDSGSWIYPGEYVEFDQVIKDVKNKMWWIRFKYQADGANKKDNFYMPIGEITDKDGKLLKEKSLWGKLEVK
1990773..1990789                   attR                                                                                 N/A                 GGGCAAAAAAAGGGCAG

#### region 6 ####
2187562..2188203                   PHAGE_Bacill_SPbeta_NC_001884: putative DNase/RNase endonuclease; DJ458_010635; phage(gi9630131)     1.51e-44            StaphylococcuspseudintermediusMNRETKWYQNWKSGLTLLFVLTVVAFAATCFTNLENALAATGKSTVTSSKAAQPGTTQKFPVELVKAVDGDTAKLKYQGKTETFRFLLIDTPETKHPRLGKQPFGQEASDRTAKLLKNANKIEVEFDVGRKQDKYHRYLAYIYVDGKMVNNILVKEGLAKVDYVYPPNTRYLSQLEKSQKAAKKAKLGIWSLNSAFEDEISENDTANIGSLAS
complement(2188495..2189235)       HAD family hydrolase; DJ458_010640                                                   N/A                 StaphylococcuspseudintermediusMFTQPKLIIFDLDNTLYAFDALWQEANKATFESYEQFKGMDYDEFLPLYQKYDQHFWKQHDSGLISLDELRQLRLIETLKRYEIDVTYEEAQAYFERFFSLLLSKITVNEKMNVLLNDLKAHVEIAILTNGKLTEQRTKIENLQLNTIFNDNIFISEVMGVEKPDAQAFLKVTDELNIRPEETLMVGDSWTNDVKGSINVGMSVIWFNPSQTEDRHLDNHQIQIFTGEIEQLLEKLISMMEADCHF
2188894..2188906                   attL                                                                                 N/A                 CACATTCATTTTT
complement(2189314..2189556)       hypothetical protein; DJ458_010645                                                   N/A                 StaphylococcuspseudintermediusMLTLIFISKSEDSVTYHFYPENRFEAAPGHITVRLSDLKCSKAKKADPDENIWYLEHALTRVREHIKENHFPESEVVAWY
complement(2189714..2191006)       MFS transporter; DJ458_010650                                                        N/A                 StaphylococcuspseudintermediusMQKILDKLNFKDRKTLIGFLSVVTAGQLIYSSFEAFKGTFYNLLLEVLNVSNAELGAIFGLIGISIFFYIPGGWINNRFSIKSILIVGLLIRFITISVIIFFSPTFQVLKIIAIIWGIVDSFFWPAVLNGVIFFTDQSKRGMGFGLLESVRRAEEMLMNLLIVGIMSLVSGIVVFKGGMLAYNLLIIPLILLIIKYVPKNGIAAMDEEEKTEITGNKSLEALKGLFYVLLKPKVWLASISAMSIYWGYIILIYSVPYLQKTFDLSTTQTALFGIFNTGLMGVLMGVSAGIISDYVFKSSSKMIFAALLLSSIILLGVVFIKGSLFVSMALLIAFSVTTFLAKSVILAPIAEFDIPKKYAGSAMSVGSFAAYAPIFWVYTMNGKLLDAHQDNVVEAYRIIFEIGIIVAFLGSVCTLILLMLNRKSSRQVTE
complement(2191037..2191783)       PHAGE_Lactob_LLKu_NC_022989: glycerophosphoryl diesterphosphodiesterase; DJ458_010655; phage(gi564014246)     1.74e-13            StaphylococcuspseudintermediusMTIIFAHRGLSSKAPENTVTAFDLARKVEGVKWLELDLAITKDEQLIIFHDDDLDRTTDTTGEVSETLYEKIEHASSGEWFGPEFKEERVLTFEQLIDFANRYQLNLNIELKGVTGPNGSYLSERMIQLFKEQIKQLDSNIEVLISSFNFALLKLAEQHVPQYTRAVLFERCAFYPDWRTIVDFCGSSIVHLEDINLTRDVVQDIKSSGYTLNVWTVNDKDRANILFNWGVDGIFTDCADDLIHLQKA
2192817..2192999                   hypothetical protein; DJ458_010660                                                   N/A                 StaphylococcuspseudintermediusMIKNSFLKLLSFFIVIAIVVNLLVAFRIIAFEGRGFGIFAIINIIIVYFYFRFKNKEIEK
complement(2193180..2193476)       hypothetical protein; DJ458_010665                                                   N/A                 StaphylococcuspseudintermediusMNKITMPDITYGGDPPNFCTHFSKISFLGAGLFKNGYKLFESTGKVVEIQSWLVIDDAYAEPGHSHSTIVNKEGEAIGIHYVSDREDTPDKKLIVYTL
complement(2193469..2193666)       PHAGE_Staphy_96_NC_007057: ORF059; DJ458_010670; phage(gi66395937)                   7.27e-21            StaphylococcuspseudintermediusMEKEILEKVKQLLENQTSYKISKETNLPYQTIQDIKNGKTKLLESKFKTVIRLYEYQKQLEQENE
complement(2194007..2194315)       PHAGE_Staphy_StB12_NC_020490: minor head protein; DJ458_010675; phage(gi939535531)     4.24e-21            StaphylococcuspseudintermediusMRFSDRVMLVTKRRKQYDPDTNQYKRETVTHETLVCNINPLSPTRTSLLFGDVYKAINVIRLNTVVDYEPTHALIDGVCYAIKKRVDSRRQTAFYVEEVVLS
complement(2194312..2194602)       PHAGE_Staphy_187_NC_007047: ORF042; DJ458_010680; phage(gi66395254)                  1.05e-22            StaphylococcuspseudintermediusMGIEDHLQDKLLCEIITNVVDELKLRLPKEQAFIPQPLYFIVIEVAVKRYNKVGSEGMVSESVEGRSMSYEEDDFKQYDSFINKFFDDGCGEVLFF
complement(2194654..2195073)       PHAGE_Staphy_80_NC_030652: hypothetical protein; DJ458_010685; phage(gi100038)       2.62e-58            StaphylococcuspseudintermediusMAVTEKMTDDIAPTNRTLFVSPAFYTKIKQLVIALPQGDNKQQVLGQGVQGKIDGFTVVVVPTKFLQGVEAIAVAGQVCASPLQVNQTKTNSNIPGRFGESVEQLLYTGAFVPEELQKFIYTLGGTAVTPKKDGVDVHQ
complement(2195379..2195600)       PHAGE_Staphy_80_NC_030652: hypothetical protein; DJ458_010690; phage(gi100038)       6.62e-11            StaphylococcuspseudintermediusMMKFNLKFNLQFFADDSASGGGTSSPIAATKTKVALGETKLKDKHTGIVKTVTDAKSYVTPALITDDAIYMEGR
complement(2195615..2196199)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; DJ458_010695; phage(gi100005)     1.92e-18            StaphylococcuspseudintermediusMKEQWLKLSLQFFNDAGTEENTETDNTVENSDSTEETNDTEQLTEAQLKLVNERVNEEMARRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDYKQQLESYKMRQEAMAMFNEAGMQAPESLLNMVVQDTAEATKEAVDSFVSMVNQEVQRQLESKATQNHVAGNHVEAPKTDEAWKTFLN
complement(2196375..2196560)       hypothetical protein; DJ458_010700                                                   N/A                 StaphylococcuspseudintermediusMTKILDYEKLDKMNAEIKEASKKIKAPDVEDMPYELPDTPEDFDDLTDEEIRYLAFGIKPD
complement(2196584..2198167)       PHAGE_Staphy_187_NC_007047: ORF009; DJ458_010705; phage(gi66395224)                  3.43e-141           StaphylococcuspseudintermediusMSNLSDYWLERAQQAIQSETLEDAAKIAEIERIVAMMIADIYKNLLAYYGKLATAEGIDWREAKKIANAFDVEAFQMQAKAYVENKDFSEKANKALKRYNTTMYVNREQLLKHELGLIVTKAYAEQEKVVNHHLQDSVTRTLKHQAGILGADVHVKPTDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQKQTVANTKRLLITEAARVQTEAQKLHYLETMGDDAEYEFVAKRDEKTSKICRHYDKKVFKVKDMVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYRLRDNDGQAIDTNNTNYNEQEPVGLNKRKKNDDYRVDMKYIHSSEYRRKFDKISDNKELNRNIYQAAKEMLQHRDGDFREDLYGFDIKTGKQLFKSTDNNNEKSMVNYTKRIDKIVKSKPYQIVSVHNHPRSTLPSLGDLTAHHLRKYAKGIIVGHNGRLIVYSVNKDIDFYLLRHSLDILGVNFKSKYSSSEDRQNKMLSELKQIGLIDYKVL
complement(2198151..2199458)       PHAGE_Staphy_187_NC_007047: ORF003; DJ458_010710; phage(gi66395218)                  9.50e-103           StaphylococcuspseudintermediusMHRDQQRPRLQELLDYYLTNNRGINKREGRDEPYADYRIAHAFVKNGTDFIRGYIGGNEITFRDEKYNEEIQNINDLNDAHVTNVEILEDCIIYGRAYEIVYRNVDNQDIFKRLDPKNVFVIYSNDIEVEPVAAVRYRSEKINGKDVTLIDFYTADYRAYFYVDDNRLRERADMPQEVNMHQMLQIHEYNANRFRQGVFENVLDLIDAYDYAESDTANYMTDLNDAMLKIEGHLDLKLEEVKKMRKSRIILAKTKADASGRMGNANVDFIYKQYDVAGVEAYKKRIQKDIHKFTNTPDLSDENFGGVQSGEAMKYKLFGLEQLRSTIERQLTKGFKRRFAIIQSVRNQLNDPIDLSHMRIEYKPNIPQSLSEYADIFIKLGGRVSQETLLSWLPNIENPKEELEKVKAEEQDNHDYHDVMPLQQEKADMNDVELE
2200090..2200398                   DUF4870 domain-containing protein; DJ458_010715                                      N/A                 StaphylococcuspseudintermediusMNKSSNKILSSFCYFSVFFAPFIFPIVVWALSNGDTSRNAKRALLYHILPMISLGLSTVLFSIYNNNHSSVMFILAIIFIIAVPFYMLKNLYLGIKVLISEK
complement(2200382..2200561)       PHAGE_Staphy_vB_SpsS_QT1_NC_048192: putative single-stranded DNA binding protein; DJ458_010720; phage(gi100050)     7.37e-11            StaphylococcuspseudintermediusMIQYLIIRIIESSGQTYTEATKVRDNQTNTAVEVNNKGKAIKKYEEKNKKSSRLFIFRK
2201177..2201189                   attR                                                                                 N/A                 CACATTCATTTTT
2201363..2201704                   PHAGE_Bacter_Rani_NC_029084: integrase; DJ458_010725; phage(gi985759361)             3.87e-05            StaphylococcuspseudintermediusMFRTMIETAIRVGEANALHWSDYHSKDKTLSITKSYDQKHDRWNTTKNKEHRTIYITNDLAKELTKLKYLQNANRIVNEDVYNTTHDFIFCNAFGDPLPRSTTHNTMMHVTRK
2201723..2201923                   PHAGE_Bacill_PfEFR_5_NC_031055: hypothetical protein; DJ458_010730; phage(gi100031)     2.99e-15            StaphylococcuspseudintermediusMSIHKLGHTHATLLLESDVPMKVIQERLGHKTMAVTEQVYSHVTEKMNHKAKENFEKFINDSNLFG
