gi|00000000|ref|CP041302.1|  Escherichia coli strain MSHS 472 chromosome, complete genome. 4782773, gc%: 50.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1429614..1429625                   attL                                                                                 N/A                 TTTTATTTAATA
complement(1435545..1435757)       PHAGE_Entero_P4_NC_001609: integrase; FK543_08045; phage(gi9627511)                  2.28e-07            EscherichiacoliMVNRMRSIARTATEESGKFRTGVLEAALAHSKKDIIAAYNRAEYLAERMVLMQWWSDYVIAQKFKAIAA
complement(1435885..1436780)       chromosome partitioning protein ParB; FK543_08050                                    N/A                 EscherichiacoliMIQIRFGDNFIYLETNKLIPSKELLENVKLSHKYHQIVTSIESLGIIEPIIVFYDKDKDAIKILDGHLRVEALKDLGIEKAPCILSSIDDAFTPNKQVNHINVVEEHRMIIKSLAKVSIENLVLLWAYLLMPKIKLMTVIQVLRNFLINLYLRLHLMFGKNQFVKLKQSVQLILIIIVKNLQASWMQHRHQIKGKTLPIKRTKKPYFVWNKKWQQLRKKQKSFKPSMAQICNSLYSHILINYLVTLKFFIGSWKTRLIILMSKEFRKILMIRLLLKTASHAG
complement(1436777..1437673)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; FK543_08055; phage(gi435844368)     5.65e-07            EscherichiacoliMLPESNEFPIIQIEIAKIKFLNPRTRNKVVHEEIKESIKKRGLSKPISVRAIDEDDFKYALICGQGRIEALVALGETIIPAIIRDVSEEDAYVMSLVENIARRRPRSNELLQIIKDMKNRGLSDSEISEITGYSSNWVSSINMLLDKGEHKLLSAVERGNLPLYLAVQFARCDTEEAQDILTEAYDKKLIKSRDIIKIKHILNQRTIGNKGAKAAGFYYHKPSKRMTAEELIELYENSIAEHKSVYNNSKFIKTNLLIVNEIFNVIMMNKSFQNILEQENLSELPSQILNPINKEASK
complement(1437663..1439219)       PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; FK543_08060; phage(gi31415812)     1.35e-16            EscherichiacoliMASENDKNHKVRVAQYLRMSTDHQQYSLHNQSEYIKDYAEKNNMEIAYTYDDAGKSGVSIIGRHSLQQLLSDVEQKKIDIQAVLFYDVSRFGRFQNSDEAAYYSFLFERNGVDLIYCSEPIPTKDFPLESSVILNIKRSSAAYHSRNLSEKVFIGQANLIKLGYHQGGMAGYGLRRLLVDENGIAKEILGFRKRKSIQTDRVILIPGPKNEIKIVNSIYDLFIDDNMPEFIIAERLNEQNIPAENGTLWTRAKIHQILTNEKYIGNNIYNKTSSKLKSRLVKNPKNEWVRCDKAYKPIISKKKYNKAQEIIQLRSVHLTNEELLEKLKQKLESNGKLSGFIIDEDDTGPSSSVYRTRFGGLLRAYTLIGYKPEHDYSYIQINEALRSFYSGIIEDFKGEILKSNCYIDEYKYAPMLYINDEFLISVLITKCTHMKSGKLRWKVRFDNSQKADITIVIRMDSQNISPLDFYIIPKIENEYSKMWMTETNNIRLDLYRFDNLDKLLQIITRMKVRELYAA
complement(1439517..1440065)       PHAGE_Entero_P4_NC_001609: integrase; FK543_08065; phage(gi9627511)                  6.66e-07            EscherichiacoliSLPETVIPRFLVALNNASIRLETRLLIEWQLLTWVRPLKRFAQDGQILIKLVCGTSRLSLKRSLTKFHAKKLYESSQKVGIVNGCFQARLLLTICMSKQLMRPSVWGSEVSLLTVCDAADESGKFRTDVFEAALTHSKKDEIIAAYNRAEYPTERVVLMQWWSDYVASQKC
1440101..1440280                   hypothetical protein; FK543_08070                                                    N/A                 EscherichiacoliMRKLLSATGAELTNGVTLPSGWLVSGMSKGANNPENLRAFAVCMRQWQHKNSRINFCLN
1440402..1440767                   hypothetical protein; FK543_08075                                                    N/A                 EscherichiacoliMIKQKLKNDWDIPAILRLTKEQKRLKLSVQEVADLLDLSSYFFELAVDEKVDFKFYDLPEKVKKNLHYAGFDIFYLMTGEYSGSEPALKIASFEYSIKDMSPEEKNEVRVLIENIPITKPH
1440837..1441460                   hypothetical protein; FK543_08080                                                    N/A                 EscherichiacoliMALSSVAIVAGVATLAASLFKNTELRVIDIVELSKLSVNDIENNPQLKIVKNDINEHITGIKDPAFHEVLIEIMAKHNKPVGYFKKVDGRLQYDHSYYISINKMGWGQYIKKLINNPNDWVATLIYVIFIITMFGIAVDLDKDPQTFNQGLSIFLSGMGGLMFSFLLKGLSVQWRNSFHNVKDFEYKELFKEYANSKIDEIISSNSK
complement(1441564..1441896)       DUF1508 domain-containing protein; FK543_08085                                       N/A                 EscherichiacoliMAGWFELDKSSNEQYKFVLKAGNGEIILTSELYTTKSSAENGIISVQANSPLDERYDLKDSSNGKSYFNLRAANHHVIGTSQMYSTKQSREKGIASVKTNGTTTTIKDNT
1442675..1444033                   PHAGE_Oenoco_phi9805_NC_023559: transporter; FK543_08090; phage(gi589286180)         7.90e-11            EscherichiacoliMLIRFSVENYKSFRDRVEFSMVSSKVRSHPSHVVKATSANDISVLKVGVIYGANASGKSNIIKAMKHAQNMILKGSKAGTNLPYAPFRLDDDFEKKPSRFEFEIKINGKNYAYGFSADQKSIKEEWLYEINKKDDILIYERSNTTHFKFENIKFKNEEDEQFLNFTARGTSENSLFLYECFDRNVLKDLNYIVPISDVFKWFKAKLQIVFPNSKYRDLDFGSASDEKEGELITDILKDFDTGVSKLVLRKVSSFDDIKLPPNFKDQIIEDLKSSKAVVISGPRNKRYKVELGEDGEITVFQLMTAHKDKNGDDVYFELNQESDGTQRLFDIIPGLVELMLKDKVYIIDEIDRSLHPKITKTFMKLFSMKTVGKDSQLIVTTHETGLLDFELIRRDEVWFTEKNKSGISRIYSLEEFQPRFDKDIRKGYLVGRFGGIPKIKNILSNVEDFQKD
1444036..1444692                   RloB domain-containing protein; FK543_08095                                          N/A                 EscherichiacoliMPRERREFDRRSGVKDPSLIVIACEGEKTEQDYFNSISELCDELGSRLQLKVLPPREEGHSAPRHVLDQMDKYKKEFGIKVNDELCLVIDRDKQSWTEATISEVAQFCHAKQYILALSNPCFELWLLIHHYDVMLLGEDEKRSILRNKNGYMKSKLRDVIGQYNPSSINIHDFWGVTEIAIDRAKRLDVNPAERWPNEIGSRVYIIMEKIRQSINNQL
complement(1445107..1446369)       PROPHAGE_Escher_CFT073: prophage P4 integrase; FK543_08100; phage(gi26251024)        0.0                 EscherichiacoliMALTEVKVRNAKPTEKPVKLTDGDGMHLLVHPTGSKYWRLQYRFSGKQKMLALGVYPEVSLAEARRRREEARQLIANNVDPGEKRKTEKIEEKGLLIFETVARDWHSSNRTWSDSHRTTVLNSLITHVFPVIGKRNISELKTRDLLVPLKKAEETGHLELAARLQQRITAIMRYAVHNALIDQNPAYDLAGAVTTAKSNHRPALPLERLPELLKRIDAYKGKGITQIAVQLTLLTFIRSSELRFARWSEVNFKNSLWTIPAERRELEGVKYSNRGSKMKTPHLVPLSKQAVVLFKRLQAISGEKDLMFIGFSRDDKPISENTVNKALRTMGYDTKAEVCGHGFRTMACSALIESGLWSRDAVERQMSHQERNSVRAAYIHKAEHLEERKLMLQWWADYLNANRKEHITPFEFAQRIKKMN
complement(1446634..1446834)       PHAGE_Entero_HK633_NC_019719: hypothetical protein; FK543_08105; phage(gi428782548)     5.50e-44            EscherichiacoliMQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG
complement(1446943..1447242)       PHAGE_Entero_933W_NC_000924: hypothetical protein; FK543_08110; phage(gi9632469)     5.47e-67            EscherichiacoliMVCSTFNPLTLQKYHPDPEDLCSLCGGNHGKAAMIECKDKIHICLNCVDVLVDIKNEREDKKRSEAIRALDSWMRDGYSAAQIYDLVISKGEIPGVRIE
complement(1447449..1448159)       PROPHAGE_Escher_CFT073: transposase/IS protein; FK543_08115; phage(gi26248359)       2.40e-171           EscherichiacoliMITELSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
1448147..1448758                   PHAGE_Salmon_ST64T_NC_004348: DNA transfer protein; FK543_08120; phage(gi24371594)     1.27e-125           EscherichiacoliVQLSDGRTVTVGGKLHGAGANAFYEGIDNEGNMVRVPASSIAAPATSSASAQNYAMKKDIDAIANADASALDFMTGMTGGAGNPAIGADVRSRLTGKEQRQLYNSAQRIQGRMQNQGVAAARDMGASGINTVAEAKMYFQGMPQVDYSSPEAMQQSIREIQEYTNNYNQQYNVNVGKSQRQQSQPAQVSQPAASSNFSSLWGD
1449250..1451037                   PHAGE_Shigel_Sf6_NC_005344: gene 13 protein; FK543_08125; phage(gi41057291)          0.0                 EscherichiacoliPQQQGGFISDLGNAAAETGRGLVQAGVNVANIPASVADAVTSAAAWAGGKLGIGDGTYQPAPRVTTQGLEQDFGLQQGALTPQTTEGRVFAEALPYLTPAGVERAAVQAPTLAGRIAQGATRLLAENAIGSLAANSARDDAEALATDLGVGVLAGGAINAAGRGLGAAYRGVRGAIAPEAQQAIRFAEREGVPLHTTDLLQPTSRVGKMAQTTAENIPLAGTSGMRATQQEARSQLVQRFADKFGEYDPAVVIDSLKAKTSGIRRAAGNRLEQIQNAMAGVNIQPARAIQQIDTEISNLQKLGKVADNETISKLQSYRDELVRNAGPDGPVNLDLKQLSDLRSQFRMDVKGERPVLPNRSDAAIQRVYKAMTDDINGAIGQNLGNDTLRKYQQANAVYADEAAKLKNTRLKNVLMKGDLTPEVVNNMLFSKNKSEIKTLYNSVGRVGRAQMRNGIIGKAMEKSGGSPDQFLRQLNILQNQTGITFKGQEAAYLKGLKNYLQSTQQAAKAAVTTPTGQQTIPFIIGYGTAMNPATTGAAVSYGLLTRAYESEPFRNAMLRMANTPRGSTAFEKAMQQAQKAINALTQGAKSDALSE
complement(1451127..1451387)       PHAGE_Entero_Sf101_NC_027398: putative chromosome segregation ATPase; FK543_08130; phage(gi849122276)     6.24e-54            EscherichiacoliMYSKYDEAQFHLRLPHELHAKIKQRAKMNNRSLNSEIIAAIEESLDKQSSASVYIDDAERMAEQQSDMVKKIVFDTLKELYKKDSS
1451547..1451558                   attR                                                                                 N/A                 TTTTATTTAATA
1451607..1451619                   attL                                                                                 N/A                 TCATTTTTAAGTG
1451802..1452140                   PHAGE_Entero_Sf101_NC_027398: bifunctional tail protein; FK543_08135; phage(gi849122277)     6.64e-69            EscherichiacoliMPDITPNVVIGMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYDAYGAQQFYFPNVLKYDPDQ
complement(1454161..1455342)       PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; FK543_08140; phage(gi16130281)     0.0                 EscherichiacoliMLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSAGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKAELGNLNTIG
1460821..1460833                   attR                                                                                 N/A                 TCATTTTTAAGTG

#### region 2 ####
2320334..2320348                   attL                                                                                 N/A                 TATTGCCGCCAACAA
complement(2326196..2327476)       PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; FK543_12335; phage(gi209427727)     0.0                 EscherichiacoliMKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRVAGELRASVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHLREYGRTEKHKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN
complement(2327511..2327746)       DNA-binding protein; FK543_12340                                                     N/A                 EscherichiacoliMIVSPGKWVSEEQLIALKGIKKVRKRPGKNRLWKEGNISMSLMTVCHGITVHAFTTWKKLIAGLSARHQRDQDVILLGA
2327856..2328215                   Rha family transcriptional regulator; FK543_12345                                    N/A                 EscherichiacoliMSFCQITQAYFELGMTFPELYDDSHPEALARNTQKIFRWIEKDTPDAVEKIQALLPAIEKAMPPLLVARMRSHSSAYFRELVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNAVAVH
2328287..2329357                   PHAGE_Shigel_POCJ13_NC_025434: primosomal protein I; FK543_12350; phage(gi725949717)     1.45e-71            EscherichiacoliMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGNISQTAKSPAERKRAQRERERKREQNGDCHGASRNVTHMSRRVTTDKDTDKDTDQEDQNTMVHGVKNATNQAGDVQTVNLGQPAGTTPEADSAYALKADSGAVQQVMTARPEQSHQLQQPEADSAIQREADRVVPENTGQSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWKARLREGVPPEAMLDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGTNNQRCVNHISEPDNEIPPGFRG
2329398..2329820                   PHAGE_Shigel_Stx_NC_029120: LygF; FK543_12355; phage(gi985761265)                    5.12e-62            EscherichiacoliMAKVFTQEEREKIKGQVVELVRQSGRETLRQLEVKTGATRYLMSVLARELVASGDVCNSGYGLFPSEQARKDWQNARKKLSRAKLKKPSAVDPDLIWSLPDGEIRRYDRRQNIICRECRKSEVMQRILSFYQGDVRYLLK
2330012..2330974                   hypothetical protein; FK543_12360                                                    N/A                 EscherichiacoliMKIVFEVNGKKVPLKSLKYISKKDQLEVMKNWFFENFEDPANACPYESREGGYAYIYGGPYDASEELQSIFGQYVKSEYIEELVDELQTQCFDWSGNSNNIDDWYDDDIYDAVTSSGNPYLKFIDNIDKIKKLAKDKTEQQQKNHLLSLLYTNVITALETLYVELFINSIEKDDVYIANCIEKGKTEFKVSKDIAALPFKGEPIEKIRGELIRSIKEHLISASWHSTKKVIDRYEATFDIKVQKDCPIEAIELATLNRNHLVHRGGKDKEGNLVVITDQDLETLIENASNLAIMLYNSLNVATNKTTILQPDDKPFIHEF
2330990..2331991                   hypothetical protein; FK543_12365                                                    N/A                 EscherichiacoliMDIRTRKTKFLESLDSTEVIRKAVSLAIDCIIDNHNSNEDIPLVITSYDDLCRIQVLNYVQEFCEAAFPDMDEYYFSPNILRINGKTSEEACINLIKLLRSTKGMLFWSDAPSWFASLPDGLFHVVNIDQKIVTRGLNKKNSKPTIINKDYSVDTLLSELFLNGAHMEQPNVHNVSEGNMKFYDECHAGLIRPIPAPIGASYDEEITINSPDWQKLACVALRRYQSKECHDGMQWDTTDHGWTDVIAYPFVEEIQSMDNSGYRQCLVGLVTINNSNANSPYLSTVWIHPFYRRRGLLSKLWPKLQELYGSNFEIERPNENMKAFLKSAKYADY
2332103..2332393                   hypothetical protein; FK543_12370                                                    N/A                 EscherichiacoliMSTDRSKRTRRLACVGLGVFKEVLVVTGCCVPFLQNKITETIPNSYIESMMRQPHIYQDWCTSNTGGCRAGSQMCASYCGCNGNLLSCCCSYGSPF
complement(2332400..2332507)       PHAGE_Stx2_II_NC_004914: hypothetical protein; FK543_12375; phage(gi32171073)        2.08e-13            EscherichiacoliMLTGAFLYLPLVFMPEADSLKHPQQFYLTHVTSPI
2332552..2332764                   PHAGE_Entero_933W_NC_000924: protein MokW; FK543_12380; phage(gi9632542)             9.09e-40            EscherichiacoliMLDTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRLRTGQTEVAVFTAYEPEE
2333223..2333501                   PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; FK543_12385; phage(gi401817580)     5.91e-15            EscherichiacoliMAHDTKLHNSDDSAVFASRCGRRFHAFKSDWFQHPPCTEEQAEWIIQCYRRRGYEVKKALSLDYRHWIISVRLPYSERPPRPSHTFQQRIWR
2333503..2334552                   PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FK543_12390; phage(gi428782365)     6.32e-136           EscherichiacoliMRVLLRPVLVPELGLVIVKPGRESMPVFHNTRLLVEPEPKSMRNLPSGVVPAARQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQVAHQNLSAWMIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLALLPHAHQEQHPLQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDLIFRFLDHAFATGVLG
2334565..2334939                   PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; FK543_12395; phage(gi985761276)     2.59e-46            EscherichiacoliMLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQRLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQPVSGGRMGVKIYPIMHEEQVKK
2334936..2335757                   PHAGE_Entero_HK225_NC_019717: late gene regulator Q; FK543_12400; phage(gi428782441)     9.75e-113           EscherichiacoliMKLEDLPKYYSPKSPCLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPLVMRIMASYAFEDYARSAASKKQCPCCYGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGYERLPSTEAFNAICEVTNQITRASWEKTVKKFYDALVTRFDIEEAWAERQLKKVTR
2335901..2335976                   tRNA                                                                                 N/A                 GGTCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA
2336086..2336162                   tRNA                                                                                 N/A                 GCGTTGTTAGCTCAGCCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGGTTCGAATCCAGTACAGCGCGCCA
2336300..2336626                   hypothetical protein; FK543_12415                                                    N/A                 EscherichiacoliMVFSALNIYHSYGVGRVNIDEASGCFILRQRIDIVNAARAKAFSRLTVLFCAPDRLSGRDVIILNSDAIQRVCDEFMVANSELFALVQEYNRIARTCGMDELRITHLG
2336662..2336793                   DUF3927 domain-containing protein; FK543_12420                                       N/A                 EscherichiacoliMIAYCFCEWHCSSRIMSVLADGVLVAGVVVVAFPLLKKKTPDC
2336736..2336942                   hypothetical protein; FK543_12425                                                    N/A                 EscherichiacoliGGCGSCCFPVAEKENARLLAGYQLAGEIFKYFTIQAVDCSLVCGEFVKRNWHGESPCAEGQSASRYMG
2337160..2337588                   cell envelope integrity protein TolA; FK543_12430                                    N/A                 EscherichiacoliMGFRSASILTLIISGIIIGCTDAVSTNYHDRTSYYSDKAIETQYVSSSERTSDVSEDIRLYAHQIKSAIEKQFGDASKYSGKECTLRMHMAPNGLLLEVKRESGDLDLCREAMNAIKNADIPAPPSPEVYKVFQNGVLDFKP
2337760..2338134                   tolA family protein; FK543_12435                                                     N/A                 EscherichiacoliMLTFWVGFVAGCTPLHPSDCHKTTATGSCSSGRWDDQDEWGAQARGIRAAINAKLDEPHNWKGKKCRLHMEFSQDGTALKISTSNGDKAYCEAIKSAAHKAKFPAFNNPEVYRDFQKSGFDMRG
2338386..2338601                   PHAGE_Entero_mEp460_NC_019716: porin; FK543_12440; phage(gi428782370)                3.75e-44            EscherichiacoliMKSMDKISTGIAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
2338606..2338950                   PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FK543_12445; phage(gi428782371)     9.67e-52            EscherichiacoliMTQKYELIVKGIRNFENKVTVTLALRDKERFDGEIFDLDISLDRVEGAALEFYEAAARRSIRQVFLDVAAGLCEGDELSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPKW
complement(2338916..2339188)       hypothetical protein; FK543_12450                                                    N/A                 EscherichiacoliMDNSTISLQELLDCISKLRDDVNALTVAFSYLAFSIPKEQMQPTLASLQLESLNPKWSQQQQNSFKWLAILLEEKYAGEITISAESSENQ
2339294..2339836                   PHAGE_Entero_mEp460_NC_019716: endolysin; FK543_12455; phage(gi428782372)            3.84e-115           EscherichiacoliMNVKIRYGLSAAVLALIAVGAPAPDILDQFLNEKEGNHTTAYRDGSGIWTICRGATVVDGKPVFPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNADDRKGACEAIRWWIKDGGRDCRLTKGQKNGCYGQVERRDQESALACWGLEQ
2339833..2340153                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FK543_12460; phage(gi435439324)     1.26e-64            EscherichiacoliMKINPDLIGVVVIAGLSVALVKSCSYASNLQSDNDVLRSDNSMLGQVIATQAFNFNRFNQVAEHANSLNSLIDTSTEKTVIEYREILRREKTCDLPVPADIAGGLLE
2340098..2341795                   PHAGE_Entero_9g_NC_024146: side tail fiber; FK543_12465; phage(gi640885143)          0.0                 EscherichiacoliMKKPVICLFLLISLVGCSNNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTNAAGNHSHRDGRRFNPSVFKDTYQYGYTSSGQNTWGVQGSVGMSTGALANTSTDGNHSHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
2341795..2342376                   PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; FK543_12470; phage(gi16129505)     4.60e-133           EscherichiacoliMAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGSLPENVTWLSPEGEYQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVNTTTAPDIEWPVAPIG
2342913..2343063                   tail fiber assembly protein; FK543_12475                                             N/A                 EscherichiacoliMRRWNYNIFFYNFNLNIVAGGMEEISGLADVVLALPCGYRMASCTCGVA
complement(2343196..2343393)       hypothetical protein; FK543_12480                                                    N/A                 EscherichiacoliMDGESFNFDDNDIEFIASMYASCKLSGSIAPIMHIMVSIPKNKKKQFYERVEHYCSLYSNKNPPS
2344110..2345393                   PHAGE_Burkho_phi1026b_NC_005284: gp59; FK543_12485; phage(gi38707949)                7.81e-28            EscherichiacoliMDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL
2358807..2358821                   attR                                                                                 N/A                 TATTGCCGCCAACAA

#### region 3 ####
2533900..2533912                   attL                                                                                 N/A                 AAATCAGTTTATC
complement(2548364..2548945)       PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; FK543_13385; phage(gi428782810)     4.24e-133           EscherichiacoliMAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNSLMQVASEHIAPLQDAADLKIATEEETSLLEAWKKYRVLLNRVDTSVAPDIEWPAAPIG
complement(2548945..2549889)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; FK543_13390; phage(gi169257320)     3.94e-109           EscherichiacoliMTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMSAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTNAAGNHSHRDGRRFNPSVFKDTYQYGYTSSGTNTWGVQGSVGMSTGWLANTSTDGNHSHSLSGTAASAGTHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
complement(2549974..2550762)       PHAGE_Lactob_phiLdb_NC_022762: putative ParB nuclease; FK543_13395; phage(gi571798069)     1.08e-61            EscherichiacoliMSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPMLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKKAYRLADNRLPMNAGWDEDLLRMELSVLINADFDVSLTGFGPTEIDELLTDVLPGTGNKEEPYTTKIDTPVYEPSGGKPDISELYDDTKTQELISRIRSASLDPDIEKFLLCAAERHTVFNFSRIADYYAHAPAEIQCLFEESALVIIDYQQAIENGFVRMTQRMVEIMHGGEEEYA
complement(2550900..2552357)       potassium transporter TrkG; FK543_13400                                              N/A                 EscherichiacoliMNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFIDALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGGAKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGISTVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIELRFFLLIALVVIIVTSFQVWHIGMYDLHGSFIHSFFLASSMLTDNGLATQDYANWPTHTIVFLLLSSFFGGCIGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVTDRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFGVLNDIAKYLMCIAMILGRLEIYPVIILFSGFFWRS
complement(2552554..2552739)       PHAGE_Entero_lambda_NC_001416: Rz1 protein; FK543_13405; phage(gi160338810)          1.34e-30            EscherichiacoliMRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQHPPDWQTPLNGIISPSGNDW
complement(2552956..2553453)       PHAGE_Entero_SfI_NC_027339: lysozyme; FK543_13410; phage(gi849250312)                1.73e-116           EscherichiacoliMPPSLRKAVAAAIGGGAIAIASVLITGSSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREICLWGQQ
complement(2553453..2553668)       PHAGE_Entero_VT2phi_272_NC_028656: holin; FK543_13415; phage(gi966197762)            5.28e-37            EscherichiacoliMKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
complement(2554446..2554520)       tRNA                                                                                 N/A                 GCGGGTATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGATTCGATTCCCGCTACCCGCTCCA
complement(2554524..2554599)       tRNA                                                                                 N/A                 GCCGACTTAGCTCAGCAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCA
complement(2554951..2555493)       DUF1133 family protein; FK543_13430                                                  N/A                 EscherichiacoliMIYPTNTGKSGEHLRLATLESVWIQGKLRMWGRWSYIGGGRSGNMFNQLLVSKKLTKTAINEALRRMKKAGIEKAELEAFLREMINGKQKSWLAHCTDAEALCIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPEWCFSTCEKRIANWLAVAEYALYIPMRESFAQKTA
complement(2555490..2555780)       PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; FK543_13435; phage(gi327198620)     5.47e-41            EscherichiacoliMVDLRKAARGQMCTVRIPGYCNHDPETSVLAHYRLAGTCGTATKPHDMQAAIACSSCHDLIDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKEGYL
complement(2555780..2556379)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FK543_13440; phage(gi169257286)     3.80e-67            EscherichiacoliMAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRNYAFHKRFFKLLQLGFDYWTPVGGAITPCERELLPGFVDYLCESVGREHTPALSDAAEQYLNTVATRRTRDTALLKSFEAFREWVTIQAGFYTEHFYPDGSHGRRAKSIAFANMDETEFQQVYKSVLNVLWNWILFRKFSSLEQVENVAAQLLEFA
2557251..2557589                   DUF1971 domain-containing protein; FK543_13445                                       N/A                 EscherichiacoliMTHKRIPKDWVIKRSTPFFTKENVPSALLTHHNTAAGVFGQLCVMEGTVTYYGFADENTTEPEIKVVINAGSFATSPPQYWHRVELSDDAQFNINFWVAPDFSGEKVYSTKK
complement(2558202..2558870)       epoxyqueuosine reductase QueH; FK543_13450                                           N/A                 EscherichiacoliMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKNENIRFAEQHGVPFIDADYDTDNWVERAKGMEWEPERGRRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDSGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREQFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEGQE
2559141..2559413                   hypothetical protein; FK543_13455                                                    N/A                 EscherichiacoliMKIDIKNKNGNTQHLDVSSLIITLNNGETIEITDENKSRPIDIPEGVTVWGGRAPDKEASIDQLKKTTRSIGIYPLASNMVHIFPYSLKK
complement(2559550..2559972)       PHAGE_Shigel_Stx_NC_029120: LygF; FK543_13460; phage(gi985761265)                    1.08e-59            EscherichiacoliMAKVFTQEEREKIKEQVVELVRQSGRETLRQLEAKTGATRYLMSILARELVASGDVYNSGYGLFTSEQARKDWNNARKKLSRAKVKKTVVVDPDLIWSLPDGEIRRYDGRLNIICSECRKSEVMKRVLMFYRGSIQEFIR
complement(2559988..2560749)       PHAGE_Shigel_Stx_NC_029120: hypothetical protein; FK543_13465; phage(gi985761264)     4.88e-75            EscherichiacoliMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPMQAELPEETTTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAICKGRLIRVNQNGKFRYCIPGDNLPAEPKAASVTENDGKAFPQPAGVALPVQEAATQEDIKTETVADIVQSLPSFTETRADDLILPSLHLANRELRRAKNHVQKWERVCAALRELNKHRDIVRQIVDSSSRIVSEK
complement(2560772..2561518)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; FK543_13470; phage(gi169257280)     1.84e-95            EscherichiacoliMKNIATGGVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNDGQRYALSQAKFIADVLMVGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVVQPGIAK
complement(2561525..2562381)       PHAGE_Azospi_Cd_NC_010355: hypothetical protein; FK543_13475; phage(gi168495118)     1.37e-09            EscherichiacoliMLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGVEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPGGIEVSKSLTLWILLCRTGFLSRSGVSGLNFARHCVNRFERSRALTGLYGSWKNSASRVFHLSRFDTASPTNTRACSRRKVFALRRYSDGLTLFHYRTVRSRQASGGAA
complement(2562394..2562816)       PHAGE_Entero_mEp237_NC_019704: CII protein; FK543_13480; phage(gi435439306)          3.55e-10            EscherichiacoliMKIKHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELPLVPGKDWNNQQNIYHRWLKGETEAQREKIQKLIPAILAILPRELRHRLCIFDTLERRALLAAQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVIVH
complement(2562813..2563067)       PHAGE_Escher_HK75_NC_016160: regulatory protein cro; FK543_13485; phage(gi356870715)     1.66e-25            EscherichiacoliMNQKTLEDVIKTVRVSVVADVCGVSQRAIYKWMDNGKLPRTEYTGETNYAEKIAHASNGLFSADVILTIGRNKTTTKKLMGVDS
2563147..2563566                   PHAGE_Entero_HK022_NC_002166: regulatory protein cI; FK543_13490; phage(gi19343388)     1.33e-25            EscherichiacoliMVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAVSKWFNGETIPRREKLRELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLDELPDSETDELLKTLEEKKQKYNAIYEELARKKKQKAS
2563603..2563821                   hypothetical protein; FK543_13495                                                    N/A                 EscherichiacoliMLHFIPSHFFTHKMYLKYFTSMNTKYIIYLPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGIQILQCSS
2563854..2563988                   hypothetical protein; FK543_13500                                                    N/A                 EscherichiacoliMVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM
2563999..2564154                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; FK543_13505; phage(gi472340166)     1.83e-13            EscherichiacoliMQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGALRWLEKHTVS
complement(2564151..2564639)       PHAGE_Entero_lambda_NC_001416: Superinfection exclusion protein B; FK543_13510; phage(gi19263394)     2.21e-08            EscherichiacoliMLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR
2565081..2565302                   PHAGE_Shigel_Stx_NC_029120: Kil protein; FK543_13515; phage(gi985761255)             7.12e-45            EscherichiacoliMIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTCITDRMIKVFLGRDGLPVKAESW
2565302..2565472                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FK543_13520; phage(gi169257274)     2.07e-06            EscherichiacoliMTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL
2565547..2565822                   protein RacC; FK543_13525                                                            N/A                 EscherichiacoliMITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI
2565924..2568524                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; FK543_13530; phage(gi985761253)     8.16e-172           EscherichiacoliMSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAQYQGNTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSKDPVDADKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGVSKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYAND
2568517..2569326                   PHAGE_Salmon_epsilon15_NC_004775: RecT; FK543_13535; phage(gi30387413)               6.80e-107           EscherichiacoliMTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE
2569383..2569577                   type I toxin-antitoxin system endodeoxyribonuclease toxin RalR; FK543_13540          N/A                 EscherichiacoliMRYDNVKPCPFCGCPSVTVKVISGYYRAKCNGCESRTGYGGSEKEALERWNKRTTGNNNGGVHV
2569570..2569758                   DUF1187 family protein; FK543_13545                                                  N/A                 EscherichiacoliMYKITATIEKEGSTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSS
2569858..2570073                   PHAGE_Escher_phi191_NC_028660: hypothetical protein; FK543_13550; phage(gi966198069)     5.82e-05            EscherichiacoliMAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
2570049..2570061                   attR                                                                                 N/A                 AAATCAGTTTATC
2570075..2571310                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; FK543_13555; phage(gi169257268)     4.12e-112           EscherichiacoliMSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTLISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNMWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRECNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS

#### region 4 ####
3379194..3379240                   attL                                                                                 N/A                 AATGGCGCGCCCTGCAGGATTCGAACCTGCGGCCCACGACTTAGAAG
complement(3382471..3382776)       PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; FK543_17490; phage(gi428782810)     1.13e-17            EscherichiacoliMLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAWNKYRVLLNRVDTSVALGMKLFVTHVTVTVITISKVQNVY
3382833..3383501                   class I SAM-dependent methyltransferase; FK543_17495                                 N/A                 EscherichiacoliMVKLMKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
complement(3383446..3383583)       nucleocapsid protein; FK543_17500                                                    N/A                 EscherichiacoliMAYEPCQGVIIGIMPQHVLSKNVLRLDAIFSLKRKTLLQYLEPWF
complement(3383556..3385565)       PHAGE_Entero_DE3_NC_042057: DNA polymerase; FK543_17505; phage(gi100036)             0.0                 EscherichiacoliMNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLGGKAAKNYREKSVDVAGYDELAAFDDDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVACPHCGEEQYLKFGDKETPFGFKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFTTWVQIVKDWMKTKGDTGKRKTFVNTTLGETWEAKIGERPDAEVMAERKEHYSAPVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEQTLLRVDEAINKTYTRRNGAEMSISRICWDIGGIDPTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKRNKNGVYLTEIGTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETLLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
complement(3385540..3386085)       PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; FK543_17510; phage(gi100035)     1.51e-128           EscherichiacoliMEVNKKQLAEIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG
3386201..3386458                   hypothetical protein; FK543_17515                                                    N/A                 EscherichiacoliMTKKNGNALNRKIFINSENPRGRRPVTCRIAGKDPQNDNNYHLHVTTCIYAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
3386474..3386668                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; FK543_17520; phage(gi157166037)     1.68e-25            EscherichiacoliMSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
complement(3386833..3387039)       PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; FK543_17525; phage(gi100034)     6.10e-43            EscherichiacoliMNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD
3387325..3387735                   PHAGE_Entero_lambda_NC_001416: putative envelope protein; FK543_17530; phage(gi19263396)     5.95e-96            EscherichiacoliMAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
3388026..3388319                   PHAGE_Escher_PA28_NC_041935: endonuclease II; FK543_17535; phage(gi100065)           6.91e-64            EscherichiacoliMKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK
complement(3388410..3388592)       PHAGE_Entero_lambda_NC_001416: Rz1 protein; FK543_17540; phage(gi160338810)          1.47e-33            EscherichiacoliMRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG
complement(3388809..3389306)       PHAGE_Entero_SfI_NC_027339: lysozyme; FK543_17545; phage(gi849250312)                1.10e-117           EscherichiacoliMPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ
complement(3389306..3389521)       PHAGE_Entero_VT2phi_272_NC_028656: holin; FK543_17550; phage(gi966197762)            1.90e-36            EscherichiacoliMKFMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
3390110..3391207                   porin; FK543_17555                                                                   N/A                 EscherichiacoliMKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
complement(3391397..3391780)       PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; FK543_17560; phage(gi985761278)     4.06e-72            EscherichiacoliMRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLIPSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
complement(3391798..3392787)       PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FK543_17565; phage(gi526244681)     0.0                 EscherichiacoliMRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPEHYSSFASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLDFNDNHAVTMPELCWWLVRNDLADALPESAARKALRLPKSVLPSVTRESDLVPSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRRRWVNEQYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYSSQLELIFRFIDRALAIGVLA
complement(3392795..3393592)       PHAGE_Shigel_SfII_NC_021857: KliA-N domain protein; FK543_17570; phage(gi526244680)     0.0                 EscherichiacoliMNNLMVIDGIEVRRDAYGRYSLNDLHRAAGSLDKHKPAFWLRNEQTERLISELQICNSVNIEPVNVIRGGNNQGTYVCKELVYAYAMWISPSFHLKVIRTFDMVTSASEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNLAPRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMVKLGIVEQRERYSRTAINNIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESRFPELLKLLDTVH
complement(3393612..3394001)       PHAGE_Shigel_SfII_NC_021857: RusA family protein; FK543_17575; phage(gi526244679)     4.00e-91            EscherichiacoliMKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACTAIVEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVIPEGKVEITISKYEKTAGAAA
complement(3393998..3394324)       PHAGE_Shigel_SfII_NC_021857: LexA DNA binding domain protein; FK543_17580; phage(gi526244678)     6.67e-73            EscherichiacoliMTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKRGVARGITLHTAVKDDDSEVAGIIRALLAGEENARLRAAHWLHERGLKV
complement(3394324..3394818)       PHAGE_Shigel_SfII_NC_021857: PerC transcriptional activator family protein; FK543_17585; phage(gi526244676)     5.22e-112           EscherichiacoliMIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRMAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQQERNNFLARRERCLRKSSKRAVSGEEWYLSGNYVGA
complement(3394815..3395183)       PHAGE_Shigel_SfII_NC_021857: O protein family protein; FK543_17590; phage(gi526244675)     2.04e-87            EscherichiacoliMTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
3395521..3395739                   PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FK543_17595; phage(gi526244668)     1.37e-44            EscherichiacoliLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
3395730..3396093                   PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FK543_17600; phage(gi526244667)     3.80e-24            EscherichiacoliMRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAGTGKQNNTSVSTATSKKCSVICWRRLADWLAFSLVHLGTKRNRRMAVDISGRGPKRQYHSLGSNAKSTGGWSIA
3396093..3396398                   PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FK543_17605; phage(gi526244666)     1.02e-65            EscherichiacoliMTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIVWQQRAVIHFSTMTQQEVK
3396314..3396769                   PHAGE_Shigel_SfII_NC_021857: excisionase; FK543_17610; phage(gi526244665)            3.76e-81            EscherichiacoliMGYDSRLDRLAATSCYPFFNNDTARGEIMEPYSLTLDEACQFLQISRPTATNWIRTGRLQATRKDPTKPKSPYLTTRQACIAALQSPLHTVQVSAGDGITEERKCHSSAEMKYGMPRIRSRAGNELRNLLAQRTSGKLRSCTTSEKQNSGE
3396625..3397788                   PHAGE_Shigel_Stx_NC_029120: integrase; FK543_17615; phage(gi985761248)               0.0                 EscherichiacoliMSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKEPPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHCGIMEDIKKA
3397802..3397848                   attR                                                                                 N/A                 AATGGCGCGCCCTGCAGGATTCGAACCTGCGGCCCACGACTTAGAAG

#### region 5 ####
3665921..3665932                   attL                                                                                 N/A                 AAGTCATTAAAT
complement(3677903..3678346)       PHAGE_Entero_P4_NC_001609: putative CI repressor; FK543_18920; phage(gi9627516)      6.53e-36            EscherichiacoliMMMPALQKLPFSGLPFSGICGYSFSAAAKSAAGRGNPSMLSATYDAPCVFFCVAINATERQIMVWCVVSRANGTPCILPASAHYTAESMVAQAGQPPGWPVSDNAGISTPVWAIAIERGNSGDSVIYAVIGGCLMATTLSRTGSHHA
complement(3678343..3678609)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; FK543_18925; phage(gi9627517)     1.12e-59            EscherichiacoliMQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIAGRKRGYDA
complement(3678622..3678813)       hypothetical protein; FK543_18930                                                    N/A                 EscherichiacoliMYFTIIFSSSFQSVLKLSGADVQKTHSHCKAAGTNPPCCVCQKYSQNKALPEAGRTYPVLYGH
3679161..3679895                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; FK543_18935; phage(gi9627518)     8.48e-177           EscherichiacoliMSDNTIPEYLQPALAQLEKARAAHLENARLMDETVTAIERAEQEKNALTQADGNDADDWRTAFRAAGGVLSDELKQRHIERVARRELVQEYDNLAVVLNFERERLKGACDSTATAYRKAHHHLLSLYAEHELEHALNETCEALVRAMHLSILVQENPLANTTGHQGYVAPDKAVMQQVKSSLEQKIKQMQISLTGEPVLRLTGLSAATLPHMDYEVAGTPAQRKVWQDKIDQQGAEPKARGLLS
3679892..3680392                   PHAGE_Entero_P4_NC_001609: transactivation protein; FK543_18940; phage(gi9627519)     4.97e-117           EscherichiacoliMIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASESFFSDCKDSGMEYISGKQRYRDSLTSASGSMKRPKRMLVTGYCCRRCKGLALSRTSRRLSQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAESLHEKQELPPVRLKTQSYSLRLE
3680466..3681038                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; FK543_18945; phage(gi9627520)     1.21e-137           EscherichiacoliMESTALQQAFDTCQNNKAAWLQRKNELAAAEQEYLRLLSGEGRNVSRLDELRNIIEVRKWQVNQAAGRYIRSHEAVQHISIRDRLNDFMQQHGTALAAALAPELMGYSELTAIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAASVDDSREKFTPAQNMIFSRKSAQLASRQSV
complement(3681341..3682081)       hypothetical protein; FK543_18950                                                    N/A                 EscherichiacoliMISELTFSRKFTSFWNQLLPNANNFIRIINGSLIEDVYPPLDDCANRSNNVFVNECAFNLYRAIQNDSLDRNILSAHDIFHNADFQVVFEKTKEYLQRFAYGSNFKLPLSMVEYNAIREIARNILSRYGMENQIEVSPQFDGCGVINNSYGDIYYSNVLVEIKSGDRKFSVYDLRQVLIYFTLNFYSKNKRNIKRFELFNPRMGITYSDTIVNLCKELAFIQPEELYFEIMNSITEENFIVTEMQR
complement(3682078..3683706)       PHAGE_Escher_pro147_NC_028896: hypothetical protein; FK543_18955; phage(gi971753751)     4.52e-08            EscherichiacoliMSNEFDSSKLENCFELALENIIKHGDTDIFPYPFESRLFEDDKEKVKTALMQTFNDFENKRIEIPPNIINSFSSIGYYGYRWATQIDPFWNAFFLGLVLKIADDIERNRSTKTQVYSYRFKPNLADGSLFDKEISWRKYQEDSISECSNDEIKYVLTCDIADFYPRIYHHRLENALDRVDPNKDYSGKIKKLLQTFSETKSYGVPVGCPASRILAELALDSIDKLLSMNRINYKRYVDDFVIFCNSREDAHKILTLLSKKLMENEGLTLQKQKTNIVTKEEFLSVTKAKLHGNDEDEESPMKAKFMSLPIRFDPYSANAIEEYEEIKESLKDFDLLAMLSSELQKSKINQSFSKHLIKAFSATSDEIISSAFKVMFNNLHELYPIFTTIIQVANSNWQKLSTETKDIILDKITALIKQDSYILSTELNLAYVARMLSKENSEKSTLILSEIYNNNPESILVKNIVTQSMAKINSYAWLSDIKKNFSAMHPLQRRLLIVSSYILGDEGRHWREHNKKTFNFVEVIYRDWASKRHTARNLEDAL
3683537..3683548                   attR                                                                                 N/A                 AAGTCATTAAAT
complement(3683699..3684883)       PROPHAGE_Escher_CFT073: putative prophage integrase; FK543_18960; phage(gi26250313)     0.0                 EscherichiacoliMPLNDMQIRRAKPEAKAYTLGDGQGLSLLVEPNGSKSWRFRYRYAGKPKMISLGVYPTITLADARSRRDEARKLVAEGKNPSEVRKEQKLALQTESENAFEKIAREWHQQKSTKWSAGYASDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIATGRAEFNPAADLSSALNVHQSNHFPFLKANEIPDFLRALNGYTGSRLVLIATKLLMITGVRTIELRAALWSEFDLDNAIWEIPAERMKMRRSHLVPLSTQALDLLNELKMMTGKYSYVFPGRNDPNKPMSEASINQVIKRIGYGGKLTGHGFRHSLSTILHEKGYDSAWIEIQLAHIDKNNIRGTYNHAQYIDKRRDMMQWYSDYIFIKENVNE
