gi|00000000|ref|CP041722.1|  Staphylococcus lugdunensis strain SL13 chromosome, complete 2694981, gc%: 33.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1090695..1090708                   attL                                                                                 N/A                 GAATAAAATATTAA
complement(1098973..1100355)       PHAGE_Staphy_phiMR11_NC_010147: integrase; FO454_05015; phage(gi162290108)           0.0                 StaphylococcuslugdunensisMKVAIYTRVSTLEQREKGHSIDEQERKLRSFCDINDWTVKDVYVDAGFSGAKRDRPELTRLLDDISEFDLVLVYKLDRLTRSVRDLLDLLEVFENNNVAFRSATEVYDTTTAIGRLFVTLVGAMAEWERETIRERSLMGKRAAIKKGMILTAPPFYYDRVNNTYIPNQYKDVVLDVYNKVKKGYSIAHIARLYNNSDVKPPNDNKEWTTRMLMHALRNPVTRGHYQWGEIYIEDSHEPIITDEMYNTIIDRLDKHTNTKVVAHTSVFRGKLICPNCGYALTLNSNKRKRKNDTIVYKTYYCNNCKTTKGMKPHHITETETLRVFKDHLSKIDLKQYETQEKEKQSHVTIDLSKVMEQRKRYHKLYASGMMQENELFELIKETDEMIEEYEKQRKQVDVKEFDIGKIKEIKDVLLKSWDIFTLEDKADFIQMSIKAINIEYTKLKRGKSSNSMKIKDIEFY
complement(1100421..1100621)       PHAGE_Staphy_71_NC_007059: ORF042; FO454_05020; phage(gi66396080)                    1.76e-25            StaphylococcuslugdunensisMDNKYITKDVFEQFEKRIDDKLDSLPDRMADKMDAKISKFEARQTKCFVGVGVGLIGVLLKVFGII
complement(1100779..1101300)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; FO454_05025; phage(gi971755523)     1.03e-88            StaphylococcuslugdunensisMGVRNSNLEIRPTLSNLQFYIGQTGKPEHDPLLDFSLLYEHAELGVKFTLSGLDRINNPYSNNNEIYLVILLYDKTGDIGFELRNFWSLYLDEKNMQKKHENIQFTLYKFEPNSKAYDFTNIYQELKVIALPEEIKENNIDKDTMLNWMSNKQLNEVFATKIPIYHSKEFNDE
complement(1101319..1101780)       PHAGE_Staphy_CNPx_NC_031241: membrane-associated initiation of head vertex; FO454_05030; phage(gi100034)     3.77e-90            StaphylococcuslugdunensisMGLYEEMLIKHDYIEIKETDVMPDNLSGVWLDDLILINSNLPETRKTEVLYEELAHHKLTYGNILDQSKWINRKFENYARRHGYEAALPLRIIVEAHNYGVSSLYELADYVQLSEEYIAEILKHYKNKYGIGTHYGEYLITFDQLRVFKYKEI
complement(1101792..1102115)       PHAGE_Staphy_CNPx_NC_031241: RecA-like recombination protein; FO454_05035; phage(gi100035)     9.71e-72            StaphylococcuslugdunensisMRTSAEIGKLIKQLRKKNNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALNVTPESLLLKNKQPETEVQHRAAHLEGELTDDEWQRVLDYADYIKSKRK
1102280..1102528                   PHAGE_Staphy_CNPx_NC_031241: DNA polymerase; FO454_05040; phage(gi100036)            1.33e-48            StaphylococcuslugdunensisMYEFNVKRMKAERIAKGISLSEMANKLEMTPGTYSKKENGHIRINVDDLAKVIEILEIPQDKCGIFFTNKVSITSTKEKQIT
complement(1102703..1102912)       PHAGE_Staphy_85_NC_007050: ORF074; FO454_05045; phage(gi66394928)                    5.66e-46            StaphylococcuslugdunensisMSKHIYACLLGEWVNLSESENVVIDNSYTDANLWYKEVGHKMFDYNQMHIGYNGIDYFIHPSFIQVLTK
1102959..1103831                   PHAGE_Staphy_85_NC_007050: ORF013; FO454_05050; phage(gi66394883)                    1.27e-176           StaphylococcuslugdunensisMLIDINKVTVGKRIRKDYGDIASLADDIQDRGLINPPVVTPDYELIAGERRLEAMKKLDYKQIEVRVMSVEDQEHQLKIEISENEERKEFTYSEKMDYAKQLERIEAKKAKDRMAVKKQGKVLGPDLKKGKQTRDIVGKASGFGSGRTYDRAKYIYENADEKTIKEVDEGKKSIRKAHDELRAKEKVKEVDKVEAPVKEKPQTQVIDRRERMNAEVEAMSEAETNLALSEAAAANIVNVCSNLLYAVDNIEDLELTLNFLKSRDTEELSKVVKASKALNKIIEKGDFINV
1103824..1104591                   PHAGE_Staphy_85_NC_007050: ORF016; FO454_05055; phage(gi66394886)                    3.09e-164           StaphylococcuslugdunensisMYNQQLPVHRLQTDMSYQSPVQERQVKKIVKNFDPKKLHTIVVSKRKDGSLYIIDGQHRVEALKELNILFIEATVHENLSVEEEAEMYYGVNDRPSKNANQKGKSRLRFKEPVAVAIDETVRSVGLNVDYEKNAPSKGYIKAYEALQSIYKNHGANHLGLVLEIIKDSFGDDTRNYQSFVLRGFSKLLTVYLNEIDLNILVTRLQKIGYEGFILEINKKQGGFETKKECLPFVVADIYNKGRRQNNQIDKMKLHV
1105013..1105210                   PHAGE_Staphy_29_NC_007061: ORF082; FO454_05060; phage(gi66396252)                    1.75e-26            StaphylococcuslugdunensisMLNLKELREAKGLSRYQLAKKTGLQNSTIRSAELENSNPGFLTVKKICDALKVDINKVKEIEQTT
1105224..1105535                   PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_05065; phage(gi122891724)     7.26e-53            StaphylococcuslugdunensisMNKLYKTPLLITMAVVTWKVWRIGNSKPTLGEVYRRNKPELPTVTLNKNGLFINDFRVPYVLEEGVNVKKSMNNLYTVSLVFFAKRIIADNYEADNPENQQLF
complement(1105483..1105866)       PHAGE_Strept_315.2_NC_004585: hypothetical protein; FO454_05070; phage(gi28876256)     4.95e-13            StaphylococcuslugdunensisMDYFNLYKVILEACDNPSVTDGQELIDIISTHPYILELREKYEDDLIISKIIQILENGIDDNVIKGDYVINMDNNFHRISGLTTSGHLYLKTLSNNSSFSKFKNFAKNTSSKITVDSLGYLLRNYLQ
1106094..1106273                   hypothetical protein; FO454_05075                                                    N/A                 StaphylococcuslugdunensisMRSLTIALITFILISIITMVIFEIYFTTGLVVSAATATAVYWFYEHHFFDKKTATCANK
1106342..1106827                   PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO454_05080; phage(gi939535491)     9.21e-88            StaphylococcuslugdunensisMSNLFELSTNYQQIYNLISEQENELILKDTLASINDALENKADSYVAIIKSLEADNKVIDEEIKRLRQRKSTNENGIKRLKESLQQAMEETGKEKFKTSLNSYSIAKNPPTLYVQEENSIPKEYYIEQEPKLNKTELLKAVKDGLEIKGVELKQNRSLRVR
1106828..1107502                   PHAGE_Staphy_Ipla7_NC_018284: erf superfamily protein; FO454_05085; phage(gi399529156)     4.18e-149           StaphylococcuslugdunensisMTEKLNLYQKIADVKANIDGFTKDTKGYNYSYVSGSQVLHRIRNKMIEHNLLLVPKTSEENYKQIEVTRFNKKASREVTTSEFVVEMKLTYLWINADKPEEQLEVSFYSVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKQKQEKYNKASSNTIGVLKQEVYQFVALMKSLGKEVTQQQAEKTFGIQEYASMTEQQAANTINKIQTMAKKYKENEQ
1107499..1107915                   PHAGE_Staphy_phi5967PVL_NC_019921: ssDNA-binding protein; FO454_05090; phage(gi431810257)     1.74e-59            StaphylococcuslugdunensisMNTVNLLGNLVADPELRGQNSNVANFRIAVQRPFKNKQTNEYETDFITCVAFGKTAEIITNNFKKGNKIGVTGSIQTGSYEKDGQRVYTTDVAVNQVTFVERKNSNAQSSNQPQQNRQAQSGNNPFDNGLEEFSDLPF
1107930..1108607                   PHAGE_Staphy_CNPx_NC_031241: rnaseH; FO454_05095; phage(gi100048)                    8.89e-140           StaphylococcuslugdunensisMPIIKNYIRQDDGTTTVVIEGVDIDNKTSLLLDNGLDVECEVKPVDPFKITDKQRRKIFALCNDIEAYTGQPRDYMRYMFMDYVEVLYGYERGLSLSDCTREQASQIIEVIIDWVFHNNIPLNYKTSDLLKNDKAFLYWSTVNRNCVICGAQKAELAHYHAVGRGRNRRKIDHTDNKVLALCRKHHTTQHQMGIESFNKYHQLQDSWIKVDDRLNKMLKGEKNDG
1108597..1109337                   PHAGE_Staphy_phiPVL_CN125_NC_012784: hypothetical protein; FO454_05100; phage(gi239507380)     2.73e-121           StaphylococcuslugdunensisMTDKLKSNLTGYGLVFKRVMKDTNISIEAKALYSYLSSYAGANESAFPGVDLIKHELNIGKQRYQRARKELEQAGYLQVDRKQNGNIYGSNLYTIFHNPRRVDCRPVDGQPVEIQSVDNQPTTINSITNNNITNNSKTINNSATDVTRERFEEWWKLYDKKKDKKLTFSKFKSCLKKHSFEQIMQGTREYIKTIKDKQYQKYPKTFLTNESYMNDYSEEMPQETSNQYTDAFERAAQSQNMENLPF
1109350..1110135                   PHAGE_Staphy_55_NC_007060: ORF016; FO454_05105; phage(gi66396129)                    7.74e-156           StaphylococcuslugdunensisMEAFQKLAKQAGFRNKIVKQEFGLHCNDCGRKYDYYEFDNGQIVKDGCDCDMIALAKVSTENYHKKQRKSKAEKIFKQSIINDNLAQVTFENYEPTSEKLKYAKGLCERYARNFTLDNKQSLLIQGSFGTGKSHLSMSIVKEVKAKGYTVLYMNVPQLISTIKNTYNNRNGMTEQELAQIISDVDLMVFDDFGINMNEFATSKMFELVESRVGKHNIFTTNLDEKEMTRNKDMQRIFSRIMSNTTLIKMDGQDYRTRGLKF
1110286..1110528                   PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; FO454_05110; phage(gi971766729)     3.17e-38            StaphylococcuslugdunensisMGIRENQLKAYNLYESDGWKMLRVLPRDDDTFYLANLGGMQKNKFKEYVNKDELAEIKRKYKLFRKEELQQQTTIDDYLF
1110537..1110944                   PHAGE_Staphy_StB20_like_NC_028821: endodeoxyribonuclease RusA; FO454_05115; phage(gi971746501)     1.14e-72            StaphylococcuslugdunensisMQLEIKFNDVFEAPIGSPRPRFRKSGKFVQTYMPAAYTKHKEYIKEQMPKLMIESKLKVSLLFCFEPPKSWSKKKKTTAIGQYKHTKPDIDNLIKTVLDAANSHLWKDDNQIVEIHSFKKFAEQAKVIMSLEEVE
1110941..1111255                   PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO454_05120; phage(gi939535504)     5.93e-16            StaphylococcuslugdunensisMKALDLIEELQDAMEHYGDFDVKTERNEDIELKHIYSFQPEATAVINVKGRMPMVNLNGKRYRLCDVYKHFDVADSTVRKRYKQGLRGAELIYGKGHYFFEGDN
1111377..1111817                   PHAGE_Staphy_CNPH82_NC_008722: hypothetical protein; FO454_05125; phage(gi119953732)     3.98e-33            StaphylococcuslugdunensisMTSIKELNIGDYIIFRRDNDNNSYPGEVLLKGHMTGQDTFKTFARVKVGNLTEPVMITDDDDFTVVEKTEDNVNSPSHYNYGDIEVIDYIEQVTAHYPSNLAYDIGNAIKYLSRATHKNGKEDIAKARWYVQRVFEKMGGLENGKD
1111804..1112037                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05130; phage(gi971755141)     9.96e-15            StaphylococcuslugdunensisMVKIKREQIEQAIISASAFTGNDTEELLQEVDKVYKKAKALDDVVNIKKNSKFNSLIWIKTNEVIKNYEERIGRNGV
1112045..1112296                   hypothetical protein; FO454_05135                                                    N/A                 StaphylococcuslugdunensisMREIIKLIIKSITRAILNRVIKDLLAGNQIAKHILKEIPDDEKGIVRACKKIGMSDIQTIGFITILGEEVGNNEEEIMKRFYK
1112315..1112830                   PHAGE_Staphy_EW_NC_007056: ORF024; FO454_05140; phage(gi66395831)                    6.49e-84            StaphylococcuslugdunensisMTNQLEIKLLSDKATMPTRDRLDAGYDIYSAETVILEPQEKAVIKTDVAVNIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYQGNLGINIKNDVDERYRKLKSTTYLNIKDECVERDYHDTKKLNSYKIYKGDKLAQLVIVPIWTPELKEVEEFQTESERGEKGFGSTGY
1112867..1113016                   PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; FO454_05145; phage(gi509140972)     2.53e-05            StaphylococcuslugdunensisMTQFLITEIKHGQETFVDVTKPHDNEIYTLVEEESAEEARRKYEEGLDD
1113009..1113191                   PHAGE_Staphy_StB20_like_NC_028821: transcriptional activator RinB; FO454_05150; phage(gi971746497)     3.36e-22            StaphylococcuslugdunensisMIKRILKIWFTIALYELGKWIGRELYYKLSANDEVDIAPNDYARITDQYDLDKIKKVFIE
1113334..1113750                   PHAGE_Staphy_Ipla7_NC_018284: RinA; FO454_05155; phage(gi399529178)                  7.82e-82            StaphylococcuslugdunensisMIVIQKHDIKKLEDYIKNIEEYRKEFLMRGYELMENHEPENIGAGKSNLPGNPIERETVKKLSDNRYVMLRNVVKGVDKLIFEADEDTKDLIRLRYWECPIGCYEWEDIANYFGISKTSVLRRRDAMISRLAEFIGYV
1114053..1114481                   PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; FO454_05160; phage(gi13487829)     5.02e-31            StaphylococcuslugdunensisMGRRTLYEKLDIKDKLDLVEGWKRDGLTDEQIARNFGVNFKTVMKWKEDHSEFMEAIKKGKEVSDYELENALHKRATGYYYEEETVTNAGKVVKVKKYEHANPTSLIFALKNRLPHKYRDKVEQEITNRNFEIKIGDYDDES
1114468..1115742                   PHAGE_Staphy_phinm2_NC_028913: phage terminase large subunit; FO454_05165; phage(gi971755149)     0.0                 StaphylococcuslugdunensisMTKVKLRFDNPAKVFNRNIFDVLFNYDNFTEVHYGGGSSGKSHGVIQKVVLKALKDWKYPRRILWLRKVQSTIKDSLFEDVKDCLINFGVWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHINKQIFLMFNPVSKLNWVYKYFFEHDKPMENVMIRQSSYRDNKFLDEMTRQNLELLASRNPAYYKIYALGEFATLDKLVFPKYEKKLLNKQELSHLQSYFAIDFGYVNDPSAFIHCKVDMENKKLYIVEEYVKKGMLNNEIAEVIKRLGYAKEIITADSAEQKSIAEISNHGITRIRPAMKGKDSIISGIQYLNQFDIVIDERCFKTIEELDNYTWKKDKSTGEYYNEPVDTYNHCIDALRYSVEMLMINNKKQKKKASDLRRIKSMF
1115754..1117205                   PHAGE_Staphy_StB27_NC_019914: portal protein; FO454_05170; phage(gi431809707)        0.0                 StaphylococcuslugdunensisMTLYTVGNVQEKFSPTANDDFVVNDLDELFKDDYIRNLISRHKTEQLPRLEMLEAYYLNRNTDILTGERRLNNNGDKADHRAVHNYARYVSRFIVGYLTGNPITITHKNNKTNNKIIELNDKNDADEINSDLALNLSIYGRAYEIVYRDMKDNDTFRVLDPKSTFVVYDSSLDKRVIAGVRYYEKSDANNIPTSYIEVYTEQDIYYLQVKDGSIVVNDVVKHFYNEVPVIEYLNDQFKQGDFENVISLIDLYDASQSDTANYMSDTNDAMLALIGNADLDGEDAKAFRDANMIHIKPSINANGGEGKADAKYIYKQYDVSGSEAYKKRLQNDIHKYTNTPDLNDENFSGVQSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNKVNIESFENHDYSELNIVFTPNLPKSLKESVEIFNDLNGGVSEETRLGVLDIIKNPKEEMKKMEKEKEKQIQSRDNSEYSNLTNDNKEDVNIDVEE
1117192..1118157                   PHAGE_Staphy_StB27_NC_019914: minor head protein; FO454_05175; phage(gi431809708)     3.56e-104           StaphylococcuslugdunensisMSKSDAQWWGLAQKGIVQEVKRDKAAIKDIEMLLMTMIKEIEKEIMSFYAKYANHEGLNIKEAKKKVDSFDVEAFKNKAKQYVETKDFSDKANKELKKYNTKMYVSREELLKGQLNSLIDYFTAETENKLSDYMHDAVEREIKRQAGILGDNVEITPQKVTSIVNADFGNTTWSKRLWSNMDELRDDVQRIASHVVLRGRHPNEFVSELRKKHDVATSDAKRLLITEAARVQTLAQKEYYTATLGEGARYQFVAKVDEKTSKTCLSHNGNIYKVKDMTPGLNAPPLHPHCRSSTIPFAPTRRKDFINSRKGRYTGAKVTIK
1118476..1119066                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05180; phage(gi971755153)     2.26e-28            StaphylococcuslugdunensisMTEETKSNVTEETEVKEQTQENQDETSNDKTKQSKDTDKTFTQEEVNQMIKDRVAREQKKAEEKAEEAAKLAKMNKDQKAEYEREKMEKELQQLRAEKATNEMRSEARAMLKEKNIDASDELLNFVVKEDANGTKESVDAFVDLLNGMVKTQVKEALRQESPKAFTTSGLTKEDILNIKDDSKRQIAIAQNRQLFN
1119086..1119991                   PHAGE_Staphy_StB27_NC_019914: major head protein; FO454_05185; phage(gi431809710)     1.93e-152           StaphylococcuslugdunensisMAAEPNLIDVKALGEAKSIDFANRMGIGLNKLFEALSITNKIPMNVGSAIKQYRFKIVDSTAPDGNVAEGDIIPLTKVEREQVKITELKFKKYRKSTSAEAIQSHGYDLAINRTDNELLRYVQKNFRKDFFNSLKSALDSADRTNKAALTGKNLQGALAKGRANLSTLLDDEITPIALVNPNDVAEHIANGFINSNGAQFGLNLLTPYVGVRVIEFADVPAGEVWMTTAENLNVAFANPRGELSRAFAFATDETGFVGVLHDIQPERLTADTVFASAISMFPENIDAVVKVTIKAETAPVV
1120006..1120245                   PHAGE_Staphy_11_NC_004615: phi Mu50B-like protein; FO454_05190; phage(gi29028598)     1.52e-08            StaphylococcuslugdunensisMVCLVASNFKDKTDNERLYLKGDVYSCDDDQRIKDLKGKGYLVVVNEQMTKKDIVDTLSSINIVVEDDKTKADILSDLE
1120255..1120584                   PHAGE_Staphy_StB12_NC_020490: DNA packaging minor head protein; FO454_05195; phage(gi939535530)     6.09e-45            StaphylococcuslugdunensisMATKENVKVLLGLKDDKQDNVLDIIIKNTESRLLSKLPINLERVPDNLSFIVEEVAVKRYNRIGAEGMTTESVEGRTNTFQANDFDEYQTIIDELYPKENGSKGSIKFY
1120608..1120883                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05200; phage(gi971755157)     5.11e-21            StaphylococcuslugdunensisMLESKGDYNTKTSKYEPKTTTYDEEVCNINPLSMERLAVEFGNITKDIMVARLQGNYDNTVSHALVNNTKYKVVTQKHYIHDTVFYLESVN
1120883..1121224                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05205; phage(gi971755158)     5.01e-40            StaphylococcuslugdunensisMNLDALIEHFEFMEDNIEDDVNEVVRNVAMDGVSIAKNNAKRVMNKGYWTGNLWREIESAKSGKLSYKITSNAGYSGFLEFGTRYMEAEPFMWPTYLEVQKNLVEDLKELLEG
1121235..1121621                   PHAGE_Staphy_Ipla88_NC_011614: hypothetical protein; FO454_05210; phage(gi215401216)     1.47e-27            StaphylococcuslugdunensisMQSPQLQLYNKTFDLAKGYDIPVISQKEMTEDISYPFVVLSRSDGRMNIGSFDTIDGQTSVTIDIWSQESDLGLHDSIVYGLQVDLSQLETLPNYQVRLNDITVNQISEDTTNQSLAHSQIVAEFDTY
1121640..1122203                   PHAGE_Staphy_phinm2_NC_028913: major tail protein; FO454_05215; phage(gi971755160)     4.45e-44            StaphylococcuslugdunensisMPQKSGKDELVLLRILGEKVDAEKVMLVTEHSRSTEKDKDSVETMDGSISAGGSLESEVKFTAHMDVQDKLSDEIEDAVEDDIAYELWFINRQVKNTEGKYKAEYRQGYFTSFERKNEADGIAEYEAEYAVFGKKKRGYATLPKLIEDNKLAYGFHDTVKADPANDGLASIPQPTESGAAETGTPVL
1122278..1122643                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05220; phage(gi971755161)     1.03e-24            StaphylococcuslugdunensisMYINFKGKELELSFGLKFLRIIDKVMAMESENISFGQGTQMLVPRLEMADAVSLSYIIEAATAHHNKAPKTESELETVIEDIAEEHGIEEFCQDIIKELGKRVMTQNLVPDEYKEAKKAKK
1122688..1123053                   PHAGE_Staphy_phinm2_NC_028913: hypothetical protein; FO454_05225; phage(gi971755162)     4.30e-31            StaphylococcuslugdunensisMSQLKIYDMQEIERLTLTEYYYRMWAREYERLDQIQQMFDLAFSIRNAQLTENIGTENKPEERYMFNDSSDLLNYEENIKRLDKGLSIKFEEKSKEVEQGMSLKDKLKLVAQVNKDAKGKE
1123060..1126716                   PHAGE_Staphy_phinm2_NC_028913: phage tape measure protein; FO454_05230; phage(gi971755163)     0.0                 StaphylococcuslugdunensisMANYKVSTEVTADVSRFKKQIQAAKRVSEKFKAVVEKLKDNDVDADTSNFDKKIDKSKAKAQELDKMKIDPDVTADISEFSRKTDEVKSIINRLDKTNADTEITADIDKAVRNIKSLQGLVNGIKNGEIDIDANTKRAETRIKNIEASLKALSSSKAAAEIRVNSEEARRKIAETKKALLEFAKKRATAKLEVDSKLANSEVSRFKLMLKSIPNKIKTRVTLDSNRFRNALTGLNRQVDVFQGRMDRIAKSIRTFGTIGSNIIKGLLLASFSALIPILGSLVPAVAAVGNATVALGGGAVGAAGAFGVLRLGVTGFAGMAVTAIKMLEKGTISASSATNNYKNALNGVKSTWQSIVKENASQIFGAMASGIRSATSALNQMRPFLSGIATLISDNAAKLRTWVTSSSTAQNAFRALNTVGVQIFGDLLNAGGRFGDGLVSIFTQLMPLFKWSSQGFQNMAIAFQKWANSVEGSRAIQNFINYTKTNLPIISNIFKNTFIGIFNIFKAFAPNSTTIFQSLEKMTQKFAEWSAGISKSDGFKKFVQYMNQNGPVIMQLIGNIAMALVNFGIAMAPIASQVLKAVTAFAGWVAKLFETHPAIAKLVGVSISLTGVLMALVPSISGVYDFLGPLITKIVGLASKLGLGKAATQALTKVFTLLFGKASLVRTVFGLLVGVFTSLSAPVLAVIAVIGSLVAIFVYLWKTNDGFREACINAWNVIKTTVSTVVTAIVTFVQSIWGGLVAWWQENHVLIQAAATVVWNTIKTVIMTVMNALGPSMKTAWEVIKQAVIIVWEVIKTTIQVAINVVWGVIKTIMQLITGDWSGAWNTIKQTAMTVWNLIKSGATAIFNALKAALSAIWNAIKSAASGAWNGMKAVIMAAVNYIKNKVQVEWNRLKAITTGVWNGIKAVISAVWNAIKSFVTSSVSKIKSSVSSGFNAVRNVVRSVMSAVKSFISSAWNGVKSIVSGAVGAVKSFVSSGFNAVRNTVSNIMGRVRSVISSAWSTIKSTVSNAVHNMASAMSSGMSRMGSAVYSGMSRVSSAVRNGVSNAANAVRSGVYRMVSAGADLARGIARGIMNMAGYVMSRARELASRAVSAIKRALRIHSPSRVMRDEVGVFIAKGLTVGMMQEGNNTIKSAAKLGDRVANAFTPQLQTPEISGISQGIKGLKDSIQGDLNASYNVKAEPTTNTIKIQLDLDDEAITAKVDGVHATKDMMLVRN
1126737..1127690                   PHAGE_Staphy_phiMR25_NC_010808: putative minor tail protein; FO454_05235; phage(gi189427179)     5.74e-49            StaphylococcuslugdunensisMDVLIQKFDGESFTLGSAGIIVHDFNVSGLELDTEYEQIDGLHGRFDMGGVYRKRTVSVPISFIAGELSDFPLHRDKLFNIVTDLDGFYIREMRRPKRLQYEFRDTTSDSGGLILDENNKETSFDTPQTANEMSSGKRYKVRLANVISLSQSNHKGEAELEFETIELPFAESVNTTLSLHNNKNYQNSKDWSHGMGLISNSEAYNYVFDAVNALSFYYPGNIPNDQSNMDKIIKFEFKKDSKGFSFAINDILVIIEDVDFKAGETLIFDGQNILNNNLSILQSSNYTQPEIKIGWNKIEIKNNAVVKTTVDARCYYK
1127707..1128804                   hypothetical protein; FO454_05240                                                    N/A                 StaphylococcuslugdunensisMRKIITPPLNDENLGRINENFSELFRRVENAIEQISQQIWNKIVDQNTIILEDQVDSVEDLPPAELPDPDKRNTIRYVRNEQKLYVFNGSDWLEFEEANYDPYQQFKKELDKSVAQYKEDLTSQLNLSKKEIDALNTSIKNNVNNIGASAISTITQLKNDVTSLKTTFETDYANKVKTFNDNVTDKTTTFNNNYTTKLNAFNDNYNNKAKAFNDNYDKKNSDINTFYNNATQTMTDLKNKTEAASASIASKKINGIVEILEGDTYYITKYEDGFAELHFTYDYTAENTKTTSGFYYYDINAIPFPAGISFVKVFSTTVSILGNYYITGGTSKNAIGSDIGVRVWSYKDAAGTPWTLQISVLGKYK
1128823..1131006                   PHAGE_Staphy_37_NC_007055: ORF008; FO454_05245; phage(gi66395737)                    5.04e-78            StaphylococcuslugdunensisMSLVFIDPTNNQDYTVEATTALNKKINGDGLLEVRLFETKENADFINKVGKLWWVSNVEGNGDKRKYVIISINKKTVNKKPTISIVAREKVYDDLANDRFYEKIDGSYTGKAYFDAVFKDTIYNYTLVATVYAQEWQNAGEGDSRLNLFLGGIDRYGLEFEYLPQSNTFMLKDKVSREPAYYLSRRINAKEISVDEDASNWATYARGYGNFSDEEGFEKALLIREYVHPLEKVFKQRRHAEPIKDGRIKIEETMDKALKSLVDDSLKISISVDFLTTKLRDKTGKMNYVSPKEGDIIMVEDDTIDFRERFRILEIKETRDARHVVTKQVVTLGDKSREERYYQSISEAQKYLDDLKRGRVKLGYSVLPQAVKTNTDALKRARTNLEFGLSGITARDPLDPNVMTVFNSRGIGISDNGGYNFKSAITGYGINADAITTGTLIADHIRGGTLASNNDDVLFELDAGKLSFQKNSSIDFYSSKNSIKYNYDLEKYNEYTNKTETIHTSIGMRILDNKRDQRPDSREVGLSFGVLDYDSDEQNTAAMAGGIEFIKGYLIKENNAMTFYDIVNLYSDTIKLGGSNIKFGVNGMEYYYSVDNNDIVDPTLYKKGTSGHVLAPTSPPTMPMNLGTTKKRFDTCYTNSFNGIYTYQNTDQYFSAIQTFGSGKKRNFATEHPEYSFYDGVGIAFSEQKNDAYIKVEDSYYSFREIVKKMQLKEYRFYPAGRGMVKV
1136682..1136695                   attR                                                                                 N/A                 GAATAAAATATTAA

#### region 2 ####
1290637..1290921                   PHAGE_Serrat_BF_NC_041917: L-shaped tail fiber protein; FO454_06045; phage(gi100266)     2.49e-06            StaphylococcuslugdunensisMLKPIGNRVVIEKKEQEQTTKSGIVLTDSAKEKSNEGVVIAVGLGRQLENGQRITPDVNEGDRVVFQEYAGTEIKQGNDTYLILNADDILAIIE
1290981..1292603                   PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; FO454_06050; phage(gi526178751)     2.63e-102           StaphylococcuslugdunensisMAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYAAPLITNDGVTIAKEIELEDSYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAIEALHDISQKVENKNEIAQVGAISAADEEIGQYISEAMDKVGNDGVITIEESSGFNTELEVVEGMQFDRGYQSPYMVTDSDKMTAELERPYILVTDKKISSFQDILPLLEQVVQSSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLELKDATMDMLGSANKVEVTKDNTTIVDGDGDNNNIDARVSQIKAQIEETDSDFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYKKVSDIQAEGDVETGINIVLKALTAPVRQIAENAGLEGSIIVERLKHADSGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEPESNNQPPMGGGMPGMM
1292586..1292605                   attL                                                                                 N/A                 ATGCCAGGTATGATGTAAAA
complement(1292672..1293844)       PHAGE_Thermu_OH2_NC_021784: integrase; FO454_06055; phage(gi526118367)               4.79e-102           StaphylococcuslugdunensisMASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRTGDYIAPSTSTFKQVADDWLKQYANDVKVSSVRTREKAIHHAIERFNNKPIQTINKHEYQRFVNDISAQYSKNYVDSIIASTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQFQILTPKTESSIGKISVDPHVIKLLKNYKTDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF
complement(1293845..1294615)       transcriptional regulator; FO454_06060                                               N/A                 StaphylococcuslugdunensisMIKFDLKKVMKEKNKTLKELSSNTGLSINTLSLLSTGKSKGIQFDTLEKLLKELRCNINDLIVLDSGFRKLIITEFSVSKKRIFIFNKLNDDRIYNVECSFKENDSSIENSILLTILFTEKQVETAVSGIFPFKFLKSGKFYYKQTANGKSKEYIILDFQFVLYILQKAYKENEEFQKMFDFHSQTFSINLIPYNNSFIEFKKTNEEEFLNANIIPAFDYLKRLVSFNDNELKFLFNFYTEEEISEELFYNYKAGD
1294785..1295003                   PHAGE_Lactob_LBR48_NC_027990: putative transcription regulator; FO454_06065; phage(gi937456709)     1.04e-06            StaphylococcuslugdunensisMMVLINLNSFKKAMFLKGYNLSDLSIETGVGISYLSQIMNGRKAPSPKLAKNIANVLEVEIKDLFYFEGKET
1295007..1295324                   helix-turn-helix domain-containing protein; FO454_06070                              N/A                 StaphylococcuslugdunensisMFNINIDENEAREILEQAINARVEELAKAKYFMTYKELSNYLNLSKPTIEELLINNGMKYYMVGPTYRFKKSDVDEFMEQLTAHMNIQNNDFKQVNIKKLLEARR
1295321..1295476                   pathogenicity island protein; FO454_06075                                            N/A                 StaphylococcuslugdunensisMKMYLTYICLVSLLTILLLAISNMYVAFSVYGMMVTYGFNLTGEITTCENK
1295461..1295664                   pathogenicity island protein; FO454_06080                                            N/A                 StaphylococcuslugdunensisMRKQVIITKTVVGWYNIKDTQHNLMLNIPPKVFEQYFPDVSKDVQVACLEMDLSKITEIKNKKKVGS
1295666..1296049                   pathogenicity island protein; FO454_06085                                            N/A                 StaphylococcuslugdunensisMEIKQKYQLSKVVKILEVVLYEEDKFQSDKDYHYQDKAFYEYALKLVHNGLFNILAELDFEDEAFLILDEVTMTLSDVMKETQHVYRYSVIDEKGEHKHTTDRKGHVIGMLEWALDYIVGNIEVEEL
1296050..1296370                   PHAGE_Staphy_PT1028_NC_007045: ORF016; FO454_06090; phage(gi66395180)                1.61e-19            StaphylococcuslugdunensisMNWEIRNLMCNIEIVKEKLEDVATTHTWFVDGRFTKRSLKTKEEVVNYGLAYNEHRIHNEQVTELMLTYLEELDGLMNKFHEIEKASSDVSLATESDDAKKLKITE
1296437..1297306                   PHAGE_Staphy_PT1028_NC_007045: ORF003; FO454_06095; phage(gi66395167)                0.0                 StaphylococcuslugdunensisMNEIKLEYDTHVSVVHYESLDSRSFNSFSKPKWSKLVNKLSVPIEANYKYARGVAVYGDIKNGANDHGEIIKKHRNDKNVIYRNVIVLDYDEINDLKQLHEAISSALSNVAWFWHTSYSHRTEQARIRLYIPLNERISADDYRNYTKVLANKIGHKVDEGSYQPSRCFALPVIQKGHIFIKRVNDCPIMDVDMLEQWLKEYEQSNASPNVIGYTRRDSEYWRELCFGTTEGNRNNALASLVGHLLRCHVNDYIVYSFALLWGQFACKPPMKEQEINATFQSILNKHYNN
1297320..1299029                   PHAGE_Staphy_PT1028_NC_007045: ORF001; FO454_06100; phage(gi66395165)                0.0                 StaphylococcuslugdunensisMEKGKSDVLDKIEKIKKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSATYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDQPYPDNFDFTTLGKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIAGDGYSSVKNGDIKAIYKRDYLCILGETVKEKLTHELQTITGQWDKKGYLIKGEKDRLQKQVKHQTVKYRGFAIRQEVLKELGFDFSNSYNPNSNY
1299360..1299740                   PHAGE_Staphy_PT1028_NC_007045: ORF013; FO454_06105; phage(gi66395177)                1.46e-88            StaphylococcuslugdunensisMDKEQLKKYIYDYVKEYKEIPIYQLEDLFKEMNHNYIGRTSITHDKDENIVFWSGWNKITMFALIELVKSEQLDLVYRGSFVMRYLLDGRVPNLPLAICYPEDGQQTDVPSWVPMVLRINKEEKIK
1299737..1300378                   PHAGE_Staphy_PT1028_NC_007045: ORF008; FO454_06110; phage(gi66395172)                6.61e-140           StaphylococcuslugdunensisMNIETIVNQFETRAGTLLRYYTGLLERSKVQPCCFKLYNDPFDMAYVMMNGKLFGHVYIKDCKVRQSFELASPNHTEGLIRSVEGHYVGYELYDGKQLSISDMMASHLFEDEYFMYGLETYAESNNSDVFEYLENGFDTDTLEGIQSTNTDVVANIEVLYQLATGINEPASELVEGLKLVTAFVQDENATLDDYKALERKLSELKSSYYSLSK
1300666..1301010                   PHAGE_Staphy_PT1028_NC_007045: ORF015; FO454_06115; phage(gi66395179)                2.29e-65            StaphylococcuslugdunensisMQKLVEKEKTYNLPDEHRQVLNVIRNTSKKYITKTKILNQLGYEYNSSNERWLRKVINSLVYDYAYPIGCSYKRNERGYYIITTEQEKQQAMISIKKLADGSMKRYEALKRIEV
1301000..1301257                   hypothetical protein; FO454_06120                                                    N/A                 StaphylococcuslugdunensisMKFKGVYYMKANQYEELSEVLDLTESQKLKLYVYQERQNKNIKQDSKESKQNNEEANREKRQKILDIKDDVTRQNAIAKNRELFK
1301269..1301790                   hypothetical protein; FO454_06125                                                    N/A                 StaphylococcuslugdunensisMKTLDQIEKYKTNIEDYRKEIKNLDAEVKNDGKQLDDINQEYQDLVINGEVEKADKLYTKIEKLESDYRAKSKRLMVMKQSFKKVVIKNCENMQDVADELSDEYNETYQDDLKRYETLNQQLKDAKDKLLGYNDEYSAKQRTLTQYIDRLKRENNIQPVEFIGNVNIIQPFNI
1301853..1302425                   PHAGE_Staphy_PT1028_NC_007045: ORF009; FO454_06130; phage(gi66395173)                1.83e-98            StaphylococcuslugdunensisMPKLTPKQERFVNEYIRTLNVTQSAITAGYSPKTAHVTGSRLLKKKHINEYIQEQKKKVIDESILSANELLHLLTNSAVGDETETKEVIVKRGEYKENPQNGKIQLVYNEYVELIEIPIKPSDRLRARDMLGKYHKLFTEKKEFTADTPVIINIGEWDEEDEEDKQRTLDKINDNYPNRTMIVDDIPLED
1302705..1303214                   PHAGE_Brocho_BL3_NC_015254: gp24; FO454_06135; phage(gi327409416)                    3.94e-29            StaphylococcuslugdunensisMAEQKYLTTVENIIGLMKEEIKNISPLRLQKTLYFLFAYYGASYGQLSKSKEYEVTKSESLNLPEYLFDAQFEAWQYGPVIRDVYKNNKYSLGYNDIDFSMSNFEIEDKTMQQEITEYLREIIKNTLKISDFGLVERSHEDEEWKNKITQQEIMNNDLIIKEYIGLVNA
1303207..1303814                   hypothetical protein; FO454_06140                                                    N/A                 StaphylococcuslugdunensisMPRFNSNVTSKKRKKNVHVEIVNKDFLPTRNEFETDKVEIELRNAEVKEVVFLMKKSIQNKIMINLLISFLILHNKIKSMLPISVKIASKITPMKLRIIMMRECYQFYLYILNKILEIRAKQILEGYLMFKRAEYIGITILITKKFVLIHNIFYQVSMVKIKIKLQPINQLLIAKSIVLVGILLIAG
complement(1304036..1304590)       PHAGE_Staphy_StauST398_1_NC_021326: hypothetical protein; FO454_06145; phage(gi509140095)     7.84e-83            StaphylococcuslugdunensisMNKKLLTKTLIASALVLTTVGSGFHSSSNYNGINNVAKAEQTTDNELWKNVRDALKDANIIDKTDNENVKVTYKLENGGESSIEGTANLNELSNSNNKPINSGSVKSIDLSRKNPNGDRFDANDAWKKLTDKLKEKQIVKDGDTVTIHSKDEKDPKISAKVGENYNDNKRLMLFKKDIDKITIN
1307245..1307264                   attR                                                                                 N/A                 ATGCCAGGTATGATGTAAAA

#### region 3 ####
complement(2100030..2101142)       PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; FO454_10075; phage(gi326781943)     1.32e-10            StaphylococcuslugdunensisMAPKLQAQFDAVKVLNETQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAISVGIPGIQVDGMDPLAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKDDIKKAIKEADKVEKQKVTDLMDIMYEEMPQNLAEQYEIYKEKESK
complement(2101309..2101938)       hypothetical protein; FO454_10080                                                    N/A                 StaphylococcuslugdunensisMKLYRALGVLLASTLLLAGCTTDRKEVRAYEDTIQQASSNEQVINSTGQKLNDLEKQKQQYYKKIVTNNPDTRVKVADKMISNINERSKEFNKEVKAMNASNKEFKKASKHINQIKDDSKRKELKELDDALKDKYKKHDDYAAAYRNILDKERSYFKLLKQKTVMQQQEKEKGEAINKAQKTFKQKFEAYIKALNKVNKEKGDIDKISE
2102076..2102627                   PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; FO454_10085; phage(gi100217)     5.15e-10            StaphylococcuslugdunensisMLTMKDIIKDGHPTLRAEAQDVDFPLSDEDKQTLKSMREFLINSQDDEIANRYGLRSGVGLAAPQIDISKKMIAVYLPDDGNGRSYDLMLVNPKVVSYSVQYAYLPTGEGCLSVDKNIPGLVHRHYRVTVKAKDIDGKDVKLRLKGYPAIVVQHEIDHLNGIMFYDHIDAEHPLTPLPDSIEV
2103062..2103280                   DUF1447 family protein; FO454_10090                                                  N/A                 StaphylococcuslugdunensisMAIFKVFYQHNKNEVIVRENTQTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSEHFNVENAE
2103280..2104959                   PHAGE_Cellul_phi19:3_NC_021789: metallo-beta-lactamase domain-containing protein; FO454_10095; phage(gi526176949)     3.62e-05            StaphylococcuslugdunensisMKQLHQNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRNAELIEITEDSVIKSKHFEVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAQLGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKIHHIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGAEVIHSKISNIHTSGHGSQGDQQLMLRLIQPKFFLPIHGEYRMLTAHGQTGVDCGVPEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNSNKDIQWHQIKSSIIETLQPYLYEKTARKPMILPVIMKVNEE
complement(2105084..2105257)       PHAGE_Staphy_Pvl108_NC_008689: putative transposase; FO454_10100; phage(gi119443708)     4.83e-28            StaphylococcuslugdunensisMYKDYNVTQLTLPIETSILIPTNDISRYVNEIVEIIPDNEFDEFKHHRGATSYHSKMI
complement(2105554..2106213)       TrkA family potassium uptake protein; FO454_10105                                    N/A                 StaphylococcuslugdunensisMDKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDEARVNEYSDIATHAVIADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELSDEHSLVELKASEKMAGQSIVNLDIRAQYGINIIAIKRGKEIIVSPDPNINIEIGDILIMIGHDNDLNRFEKKIVR
complement(2106283..2107299)       cytochrome d ubiquinol oxidase subunit II; FO454_10110                               N/A                 StaphylococcuslugdunensisMAYTGISMLVLWICLFFYVIAAGIYFGTGCFAFYMHMSGEEKKVKVLYKYMINPIWGLINICCVFCYVGMIALFPSAIHYLNTMILIPGSIALICIIIRGCSYIFINKRADISLPWLLIYCLSGLGIPAALASVLTISEGGYIIEDGAHLDLNWVQLAISPFAWSVVFLAVITVLYISAGFLTYSAAKLKDTHVYLTVRKWLLFWSMPMIMVSLFVFLSLRIQNANHFTNAIYNYWWMFTLSLLCFIIAMSLALLKKYHGIAMLMMILQLFFAFFGYGLSKLPYIVYPFVKITDTTVSVATGLTLMIVIILGLLLLIPSLILLLRLATDNKGIVKNQK
2107610..2107843                   PHAGE_Bacill_G_NC_023719: gp80; FO454_10115; phage(gi593777548)                      3.63e-10            StaphylococcuslugdunensisMAHITLYTQDDCPPCSFIKNYLHEHQIPFEEKHIKHQAYRVEMLEYDAFATPFILLNDEPMYTVDIDKINHAFNITV
complement(2107939..2109654)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; FO454_10120; phage(gi100140)     4.79e-05            StaphylococcuslugdunensisMSNLINGIAASDGVAIAKAYLLVEPDLSFTNEKITDIDAEINKFKNAVEASKIELTKIRNNAEKQLGADKAAIFDAHLLVLDDPELIQPIEDKISNEKVNAPQALNEVTSQFITIFESMDNEYMKERAADIRDVSKRLLAHILGVELPNPSIIDESVVIVGNDLTPSDTAQLNKDFVQGFVTNIGGRTSHSAIMSRSLEIPAVVGTKSITHQVKQGDMIIVDGITGDVIIDPTEDELIAYQHKRERFFEDKKELQKLRDAETVSLDGIHAELAANIGTPDDLYGVIENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQPDIFRPQLRALLRASAYGKLNIMFPMVATINEFRDAKALLLEEKENLKNEGHDVSDDIELGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAINCSTQEQVKELVHNIAR
complement(2109657..2109923)       PHAGE_Bacill_G_NC_023719: gp197; FO454_10125; phage(gi593777654)                     9.19e-07            StaphylococcuslugdunensisMEQKSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEADAIQSISDVLSKEGLTE
complement(2110075..2110617)       DUF697 domain-containing protein; FO454_10130                                        N/A                 StaphylococcuslugdunensisMGIRQNLSNRITTKVGQKVFKIEDIKEKNAMPTTQDELARCRERAEAIVKRKSLMSSTASVVPIPGLDFGVDIKLMRDIIEDVNKLYGLDHKQVNTLGDDLRERIFAAAAIQGSQFIGKKVSSAVLKIVIKDMAKRAAAKQTRWFPLVGQAISASISYYFMNKLGQDHIEKCEKVIKDII
complement(2110672..2111844)       PHAGE_Strept_20617_NC_023503: methyltransferase; FO454_10135; phage(gi588295144)     2.64e-87            StaphylococcuslugdunensisMKTAIINKGKEQKYLNHYPLVDEEDIYRQDHLKEGDLFQLTTDQGRYIATAYVGRQHKGLGWVLSYNPSEEITTSFFTQLFTDALAERDYYFHIDGTNAFRLFNAEGDGIGGLTIDNYNGHLLVQWYSKGIYKFKFEILQAIETVIPYKSIYEKMRFKDADYSGGFVKGEAPQFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDQYAEQKNVLNLFSYTGAFSVIAANHAQSTTSVDLANRSRALTEENFGLNGIDPKTQFIYVMDTFDFYKYAHRHNRFYDTIVIDPPSFARNKKKTFSVQKNYDELINGALSVLAPNGVLLLCTNSSIFSLKAFKSVIKSTLEQANVDYEIKEVMGLPKDFKTHPHYKPSKYLKAVFIQIKN

#### region 4 ####
2347124..2347137                   attL                                                                                 N/A                 TGGAGACGGCGGGA
complement(2348338..2349546)       PHAGE_Strept_phiARI0131_1_NC_031901: DNA topoisomerase II large subunit; FO454_11280; phage(gi100005)     1.62e-12            StaphylococcuslugdunensisMSNGPFFYDGGNTVDEKVYKTINERIEILKKRNMNIRGNATREIKILKENNYYNLINGYKHLFLDYNKMNQSNHREDIFKNGTKPSELYNVMQYDNNMRSIFLQYLLYIEEKVKHAIVQAFYEKNNHENLHKEFEYLKAKYYNTSLTYFITRVNKKINHQYTYTSLTNGNPVRTQFIDESEYLPLNREEKHKTFESNATDAITDQQSKKDSIKSYKRKHGYVPLWILTNILTLGNISHLFVILKDDVAFRAMDILGISHNNNEIDIYNMYRVLGILTLYRNICAHNDRFICTSHGINIDDYFMDFGKSLPFYRDPNNRNSKLKKYQRKGRKKCRYGLFSLVFCISIFLNDSTRKEFVNKIEKENGKINNRINTINIDVIKKDIGLKLELSKHVDLIKYNNIQ
complement(2349750..2350232)       PHAGE_Staphy_PT1028_NC_007045: ORF009; FO454_11285; phage(gi66395173)                2.32e-72            StaphylococcuslugdunensisMDKLTPKQERFANEYIKTLNVTQSAIKAGYSPNSAHVTGSRLLRKEKVDEYIKSKKDEIIDDTILSAKEILYLLTQSAIGDETETKEVVVKKGTFERNPDTGRMNLVYNEHVEKVDVPIKPSDRLKARDLLGRYHSIFTDKVEMSMVVPTFIDDIGRFEE
complement(2350225..2350578)       PHAGE_Staphy_PT1028_NC_007045: ORF014; FO454_11290; phage(gi66395178)                2.12e-12            StaphylococcuslugdunensisMFVGDKETLKTFILNYHNYVNDVEKEVSADDFFMLNDDVELYSLEITHTDNHIYMNELEILVDRICTQRELILFLLLRSGRSSKDIAQIFELSVNRINQLTNQLIDKIIENKEWLNG
complement(2350581..2351039)       PHAGE_Staphy_PT1028_NC_007045: ORF010; FO454_11295; phage(gi66395174)                7.36e-45            StaphylococcuslugdunensisMDKNISAPYQQTKISEYELLTKYNPKYINSKIKLAQSHISEMYHLSTSITTCDDIMGVISVSYPVDKLVIWICEKKADLKRFKNDSSVRLSLLKQVLNTYTKEERQQVVRYMQSHGHIKEHRLIERLQVDLYNVGHGKPLTKASEPQQAMVV
complement(2351102..2351809)       PHAGE_Staphy_PT1028_NC_007045: ORF007; FO454_11300; phage(gi66395171)                2.49e-39            StaphylococcuslugdunensisMYNTNATKTGSAYDVLFNDRKYKDLLDKVDEFLEETFIMYQRGYRLDAIDEKQKPKVTQIENEFKQFASDKIKNIESRLEEIEKESTTENISNPQAELINRQNLKARLSFYDNSEIIEYVRNADPKEIGVYELSLLQNIYENRFSENEQGQISGTFTQLKRMVLHPYENDEEYNDLAYQYNILRQIGMENRGSVINKDKDGYVVIKPLADRYNEQLKYAKAKKDGARKQAYAYRQ
complement(2351834..2352187)       PHAGE_Staphy_PT1028_NC_007045: ORF015; FO454_11305; phage(gi66395179)                1.25e-50            StaphylococcuslugdunensisMEVITVKVIEKEISKVPNEYLRIYDTIQNSKDKYITKSKILNLMGYESNSTNERWLRNAISKLIDDYGYPIGCSYKKHERGYYIITTDEEKHQAMQSLKKLADGSMRRYEALKRIEL
complement(2352657..2353241)       hypothetical protein; FO454_11310                                                    N/A                 StaphylococcuslugdunensisMTIIDKDIKDLNLTDDVLIEFLKLNEEDYTLNSNEYVLIDHHDNVVGNLLPLVVALDLNKSYVTCERVEFATITYYDKNIIPTIPYKWDNTKAKYINTCLELEKVEKHFEFAAWKLYCVLNGINKNNYDKYKWVLERIKKTPDDMPNVDMPICRAYEIAQLPKNLIERTYNVNGKTKPIYKMNIKQIKNLKEYV
complement(2353238..2353882)       PHAGE_Staphy_PT1028_NC_007045: ORF008; FO454_11315; phage(gi66395172)                2.50e-110           StaphylococcuslugdunensisMNVEIIANQFETRAGTLLRYYTGLLESSRKTPFGFKIYNDPFDMVYVVMEGNLYGHIYIKDCNVRKAFELASPKHTEGLIRSIEGHYAGYEIPDGTHDTISDMMASFMFDNDYFMYGLETFAESNNSDMFDYMSRDFNIDELEGVQTSNADVIGNMEALYQLATGINEPAPELVEGLKIITEFIQNEKANEDDSKALIKRLNELKHSYYNGVSQ
complement(2353883..2354248)       PHAGE_Staphy_PT1028_NC_007045: ORF013; FO454_11320; phage(gi66395177)                5.77e-14            StaphylococcuslugdunensisMGNLKQIKKEVLKFIEDKGEAYIYELEPIFDKAGVPFNGKRSLVYKDKRNQVFFYHCSTESGSVISDLSNEGKIVIKHKHIAVNRYLLDGKVPPLPLAITDEVSTPSWIPVVLRIKDKGAD
complement(2354260..2354535)       PHAGE_Staphy_PT1028_NC_007045: ORF017; FO454_11325; phage(gi66395181)                6.38e-51            StaphylococcuslugdunensisMQAVKKDYNLDEQAQSIGLITGISNEIYYCSISYVSTVYLEYIDNNWTAWRESYIPKSNKRTSYKVIATGNFELVLAKTKNYLKYIKRYSK
complement(2354522..2355325)       PHAGE_Staphy_PT1028_NC_007045: ORF004; FO454_11330; phage(gi66395168)                0.0                 StaphylococcuslugdunensisMTGYHVAKQLLKKNIEVIPLNNHKKPTVSFADKDITDEFIEYHSNIYHQTKVLGVLTRGVWCIDIDVDHEDDKNGFDSLKQIPYYEELVTNAQNTLVQTTASGGKHIIFKKHDNIEYGQKIGYLPSVDIKAHPNNYFVLAGSQTAKGIYTHNGVNVTEYQGEFEKRIFSKAGNYTQQVLEPYSIKRALSNYSFSHVRGGKGGEGKRAYQRIIDGQSEYRNNDLFKAVSYAIQCNVDIEPLRVLIGDNKNGDVFTERDWEATVRSASR
complement(2355496..2357109)       PHAGE_Staphy_PT1028_NC_007045: ORF012; FO454_11335; phage(gi66395176)                1.66e-84            StaphylococcuslugdunensisMDEVSLYKKHFEFHSKLDYVSTINLSRIKEISKRINFASISTDRQVFNNKGNVYHREKDDVAGDYISNLTLDYTIKPKEIGLVYGTVIIKTIDKNGEEEKQSTFKTSHFHNYARFIADLISNKVIYSNELDSFILVKNNQYEIIDNTNFALTYPVDNKYYIDDFLDVMLELYRTHLSINHNYVIYPYSFAGNNWKYDCRELQLEKLELKKNELYAIKYDVDFKDINLEIPKNFFSLVTDNEKSRNNLMLVHAYTMYRKMKLIQAEKWMLLKDFGRSGKGLFMATFENLMKVNKVNFDSLISGGFESANEWMNFYGADIAHANETGEITKQMMRILRKIATGETISGRGIGRNAFTFKNNAVLILDTNESVDTGEITANTTRTVKISLKDRPINETDEERYQIFKPYWDYIQPNGNTSIGASVSFLIASLEYLKENGREFKFQNVTLKNYFNEDELTETQVTMIRLLSKQGFILAGDETLQRLIEQDYSSLRYKNAKEDMRKIGISINNQKWIDGVNTKVHQVGNKELFNMALELIND
complement(2357184..2357489)       PHAGE_Staphy_PT1028_NC_007045: ORF016; FO454_11340; phage(gi66395180)                1.30e-45            StaphylococcuslugdunensisMKMEIRNLFSDLEVLKDRFEDLKDSHAWHFDERYPYETNHVLNKDELIREGFSYHERRIHDDQMIDLLCLYLQQFDNILEKFHEIEKASSEDSLATESDNA
complement(2357489..2357902)       pathogenicity island protein; FO454_11345                                            N/A                 StaphylococcuslugdunensisMEIKHKYQLSKVVQVLEKVLYEKDKDIFLSAKDRFHFITDYRYNDTVFYEHILKLVHKELFNILAEVDFEDEAFSILDEVTMTLSDVMNEDREIYHYSVVDNTGEHEYTTDREGHIIGILEWALDYIVGNIEVEEIE
complement(2358051..2358272)       PHAGE_Bacill_phiCM3_NC_023599: transcriptional regulator; FO454_11350; phage(gi589892743)     7.42e-11            StaphylococcuslugdunensisMQKIKYWNLYICYKEKGYTQKQLAKLLCISPQRFSLKIIGKDADFTMPEARKLSEHFEMSIDDLFSTSIKVNL
complement(2358259..2358483)       PHAGE_Staphy_PT1028_NC_007045: ORF020; FO454_11355; phage(gi66395184)                5.51e-18            StaphylococcuslugdunensisMKNKLSVLLGERKESVMYLSGKTGISPTTLYSLYHEKNKNPDTKTIMVLCKYFDVTPNEFFGIDRLEDKQYAKN
2358644..2359225                   PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; FO454_11360; phage(gi100017)     1.40e-09            StaphylococcuslugdunensisMIITSNLKVKMAEFNYSIKDVHEKTKLSRTTISNLYNNYSDGIKIDTLEKLCDLFNCTPNDLLKSTYLEIENIEYEKLNHVYGLNEDRTFNKSEKLSFYKANVQLKLNNIPYSIELRLIIESSNSYSDSGLEIGILRLEEYENTFIGESLNATGLVSVPLSNKIEETVLNDFIKNHTNISDYDVIEDIEYTFK
2359235..2360341                   PHAGE_Bacill_phIS3501_NC_019502: phage integrase; FO454_11365; phage(gi422934298)     1.78e-97            StaphylococcuslugdunensisMEHNLNLSHNIYKDAKRGTYYFRIKYYDRTNKRKEIKKSGFKQRKEALKKCNEIMDELEGVGQINKLPFDKLVDEYIEWYSARRKSSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNTKLKEGHSGEYLKKMHVFLVSLLNHAMKFHDLKQNVASLVGNFEIESNKRLNYWTLDQFKQFYKALATQQQKLFFKILFYSGARKGEIRALTWRDINFDDEFIHINKTDYHGEVTAPKTKSAIRDIYLPTHMINDIKDYLNWYKENNVYKDDYVLFGTFFKAYSESTIDRWFTTALKVLDDQLPDGQMFPRIVIHELRHSHASMLVNHGASIMVIAQRLGHADSNEVYNRYGHLYPSTQKEIVKYL
2360395..2360955                   hypothetical protein; FO454_11370                                                    N/A                 StaphylococcuslugdunensisLELTKLLSPLIIAYFVYKYTNDNHKKTLLNELDSKSEWRKTLFIIAGKKKIKIKDVYQLRASLRFTHKNESEYLNNDYFDNMNILIIKYCEKIINKDLMLKDDLILNNNSQETIRLFCRYMLADHWEKNQNKDFKFNNPEKEIELCNYTLNKFLLINSISFNDKSTKSNFFNLFNDVKIYIKTMTP
complement(2361052..2361410)       tRNA                                                                                 N/A                 GGGGACGTTCTTGGATTCGACAGGGGTCCCCCGAGCTTATTAAGCGTGTCGGAGGGTTGTCTTCGTCATCAACACATTCAGTTTATAATAACTGGCAAATCAAACAATAATTTCGCAGTAGCTGCCTAAGCGCACTCTGCATCGCCTAACCGCATTTCCTATGTGCTGTTAACGCGATTCAACCTGAATAGGATATGCTAAACACTGCCGTTTGAAGTCTGTTTAGAAGAATACCAATCAAGCTAGCATAACGTTGGTTGTCTATGACCTTTCATTGTGCGAAACTGAAATATAGACTACACACGTAGAAAGATTTGTATCAGGACCTCTGGACGCGGGTTCGAATCCCGCCGTCTCCA
2361052..2361065                   attR                                                                                 N/A                 TGGAGACGGCGGGA
complement(2361476..2361940)       PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; FO454_11380; phage(gi588498309)     4.33e-103           StaphylococcuslugdunensisMAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKHGEIYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGERTREVGYSIIPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAMKRDVDRAMKARY
complement(2361962..2364337)       PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; FO454_11385; phage(gi115304286)     3.68e-113           StaphylococcuslugdunensisMNLKQSIEAIVKQPDYEPMSVSDFQDALGLNSADSFRDLIKVLVELEQSGLVERTKTDRYQRKQGKSLGSKLIKGTLSQNKKGFGFLRPENDDMEDIFIPPTKINRALDGDTVIVEVKQSKGDHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDDKRIMQDIFIPKGQSLGAIDGHKVLVQITKYADGHDNPEGQVSAILGHKNDPGVDILSIIYQHGIEIEFPDAVLKEAEAVPDEISPSEIEGRTDLRDELTITIDGADAKDLDDAISVKALKNGNTELTVSIADVSYYVTEDSQLDKEAYDRGTSVYLVDRVIPMIPHRLSNGICSLNPDVDRLTLSCRMEINARGEVVNHDIFDSVIHSDYRMTYDAVNQIITEKDPEVRQQYEALTPMLDLAQDLSQRLIQMRRRRGEIDFDISEAKVLVNSEGIPTDVVTRQRGDGERLIESFMLAANETVAEHFSNLDVPFIYRVHEQPKSERLRQFFDFITNFGIMIKGTGEDIHPATLQSIQAEVEGRPEQMIISTMMLRSMQQAHYDDVNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLIEHSMDSKTQHYWAEKLPEIAEHTSQRERRAIDAERDTDELKKAEYMIQHIGDQFEGIISSVANFGMFVELPNTIEGMVHISNMTDDYYYFEERQMALIGERLAKVFRIGDTVKVKVSHVDVDERMIDFQIVGMPISQSSSQRPARGKTIQAKTRGKALDKSKNDGQRRKKSKKLKQRKGKNARKKEKNGQTNHKPFYKDKSVKKKSRRKKK

#### region 5 ####
complement(2569995..2571812)       PHAGE_Strept_SMP_NC_008721: tail tape measure protein; FO454_12365; phage(gi119953746)     2.41e-85            StaphylococcuslugdunensisMALVPSISGVYXFLGPLITKIVGLASKLGLGKAATQALTKVFTXLFGKASLVRTVFGLLVGVXTSLSAPVXAVIAVIGSXVAIFVYXWKTXDGFREACINAWNVIKTTVSTVVTAIVTFVQSIWGGLVAWWQENHVLIQAAATVVWNTIKTVIMTVMNALGPSMKTAWEVIKQAVIIVWEVIKTTIQVAINVVWGVIKTIMQLITGDWSGAWNTIKQTAMTVWNLIKSGATAIFNALKAALSAIWNAIKSAASGAWNGMKAVIMAAVNYIKNKVQVEWNRLKAITTGVWNGIKAVISAVWNAIKSFVTSSVSKIKSSVSSGFNAVRNVVRSVMSAVKSFISSAWNGVKSIVSGAVGAVKSFVSSGFNAVRNTVSNIMGRVRSVISSAWSTIKSTVSNAVHNMASAMSSGMSRMGSAVYSGMSRVSSAVRNGVSNAANAVRSGVYRMVSAGADLARGIARGIMNMAGYVMSRARELASRAVSAIKRALRIHSPSRVMRDEVGVFIAKGLTVGMMQEGNNTIKSAAKLGDRVANAFTPQLQTPEISGISQGIKGLKDSIQGDLNASYNVKAEPTTNTIKIQLDLDDEAITAKVDGVHATKDMMLVRN
complement(2574068..2574433)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12370; phage(gi122891768)     6.38e-23            StaphylococcuslugdunensisMYINFKGKELELSFGLKFLRIIDKVMAMESENISFGQGTQMLVPRXEMADAVSLSYIIEAATAHHNKAPKTESELEXVIEDXAEEXGIEEFCQDIXKELGKRVMTQNLVPDXYKEXXKAKK
complement(2574508..2575071)       PHAGE_Staphy_StB12_NC_020490: major tail protein; FO454_12375; phage(gi939535534)     1.59e-81            StaphylococcuslugdunensisMPQKSGKDELVLLRILGEKVDAEKVMLVTEHSRSTEKDKDSVETMDGSISAGGSLESEVKFTAHMDVQDKLSDEIEDAVEDDIAYELWFINRQVKNTEGKYKAEYRQGYFTSFERKNEADGIAEYEAEYAVFGKKKRGYATLPKLIEDNKLAYGFHDTVKADPANDGLASIPQPTESGAAETGTPVL
complement(2575090..2575476)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12380; phage(gi122891766)     1.37e-24            StaphylococcuslugdunensisMQSPQLXLYNKTFDLAKGYXXPVISQKEMTEDXXYPFVVLSRSDGRMNIGSFDTIDGQTSVTIDIWSQEXDLGLHDSIVYGLQVDLSQLETLPNYQVRLNDITVNQISEDTTNQSLAHSQIVAEFDTY
2575438..2575450                   attL                                                                                 N/A                 AAATGTTTTGTTG
complement(2575487..2575828)       PHAGE_Staphy_53_NC_007049: ORF045; FO454_12385; phage(gi66395408)                    2.33e-37            StaphylococcuslugdunensisMNLDALIEHFEFMEDNIEDDVNEVVRNVAXDGXSIAKNNAKRVMNKGYWTGNLWREIESAKSGKLSYKITSNAGYSGFXEFGTRYMEAEPXMWPTYLEVQKNLVEDLKELLEG
complement(2575828..2576130)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12390; phage(gi122891764)     5.85e-26            StaphylococcuslugdunensisMRYNDRITFMLESKGXYNTKTSKYEPKTTTYDEEVCNINPLSMERLAVEFGXITKDIMVARLQGNYDNTVSHALVNNXKYKVVTQKHYIHDTVFYLESVN
complement(2576127..2576456)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12395; phage(gi122891763)     2.70e-34            StaphylococcuslugdunensisMATKENVKVLLGLKDDKQDNVXDIIIKNTESRLLSKLPINLERVPDNLSFIVEEVAVKRYNRIGAEGMTTESVEGRTNTFQANDFDEYQTIIDELYPKENGSKGSIKFY
complement(2576466..2576705)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12400; phage(gi122891762)     4.51e-08            StaphylococcuslugdunensisMVCLVASNFKDXTDNERLYLKGDVYSCDXDQRIKDLKGKGYLVVVNXQMTKKDIVDTLSXINIVVEDDKTKADILSDLE
complement(2576722..2577627)       PHAGE_Staphy_StB27_NC_019914: major head protein; FO454_12405; phage(gi431809710)     3.05e-140           StaphylococcuslugdunensisMAAEPNLIDVKALGEAKSIDFANRMGIGLNKLXEALSITNKIPMXVGSAIKQYRFKXVDSTAPDGNVAEGDIIPLTKVEREQVKITELKFKKYRKSTSAEAXQSXGYDLAINRTDNELLRYVQKNFRKXFFNSLKXALDSAXRTNKAALTGKNLQGALAKGRANLSTLLXXEITPXALVNPNDVAXHIAXGXINSXGAQXGLNXLTPYVGVRVIEFADVPAGEVWMTTAENLNVAFANPRGELSRAFAFATDETGFVGVLHDIQPERLTADTVFASAXSMXPENIDAVVKVTXKAETAPVV
complement(2577647..2578237)       PHAGE_Staphy_StB27_NC_019914: scaffold protein; FO454_12410; phage(gi431809709)      1.64e-68            StaphylococcuslugdunensisMXEEXKSNVTEXTEVKEQTQENQXETSNDKTKQSKDTDKTFTQEEVNQMIKDRVAREQKKAEEKAEEAAKLAKMNKDQKAEYEREKMEKELQQLRAEKATNEMRSEARAMLKEKNIDASDEXLNFVVKEDANGTKESVDAXVDXLNGMVKTQVKEALRQESPKAFTTSGXTKEDILNIKDDSKRQIAIAQNRQLFN
complement(2578556..2579521)       PHAGE_Staphy_StB27_NC_019914: minor head protein; FO454_12415; phage(gi431809708)     1.98e-104           StaphylococcuslugdunensisMSKSDAQWWXLAQKGIVQEVKRDKAAIKDIEMLLMTMIKEIEKEIMSFYAKYANHEGLNIKEAKKKVDSFDVEAFKNKAKQYVETKDFSDKANKELKKYNTKMYVSREELLKGQLNSLIDYFTAETENKLSDYMHDAVEREIKRQAGILGDNVEITPQKVTSIVNADFGNTTWSKRLWSNMDELRDDVQRIASHVVLRGRHPNEFVSELRKKHDVATSDAKRLLITEAARVQTLAQKEYYTATLGEGARYQFVAKVDEKTSKTCLSHNGNIYKVKDMTPGLNAPPLHPHCRSSTIPFAPTRRKDFINSRKGRYTGAKVTIK
complement(2579508..2580960)       PHAGE_Staphy_StB27_NC_019914: portal protein; FO454_12420; phage(gi431809707)        6.02e-36            StaphylococcuslugdunensisMTLYTVGNVQEKFSPTANDDFVVNDLDELFKDDYIRNLISRHKTEQLPRLEMLEAYYLNRNTDILTGERRLNNNGDKADHRAVHNYARYVSRFIVGYLTGNPITITHQEQNKQQDYTQQERRNKQRLSIEFVYIRTCVRDCIQRYERQHISIRPKYVRCLRLVRQTCYSGCILKVRCKQYTYKLYRGLHRTRHLLSASQRRFYCSKCGALLQSTCYRILERPITRRFRERYFFNFIRPIYSLYVRYCNVSIDWCFGRRRCESVRCKHDPHQTFDKRRWRRQSRVYLTICFWFRSIKEITKRYSQIHKHTRFKRKFRCSIWRVNEIIVWTASSDKREIVKRVDEAIQVASKQSEYRKFKSLFGVKYCIHSLAKVTKRISNIRFKWWCFRRNKIRCTYNQKPRRNEENGKRKRKANTIPQQRIQQSNKRQRRCEYRCRRVA
complement(2580972..2582248)       PHAGE_Staphy_phinm2_NC_028913: phage terminase large subunit; FO454_12425; phage(gi971755149)     8.56e-178           StaphylococcuslugdunensisMTKVKLRFDNPAKVFNRNIFDVLFNYDNFTEVHYGGGSSGKSHGVIQKVVLKALKDWKYPRRILWLRKVQSTIKDSLFEDVKDCLINFGVWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHINKQIFLMFNPVSKLNWVYKYFFEHDKPMENVMIRQSSYRDNKFLDEMTRQNLELLASRNPAYYKIYALGEFATLDKLVFPKYEKKLLNKQELSHLQSYFAIDFGYVNDPSAFIHCQSYGKKIIYRRICKKRYVEQRNSSYAIRICKRDNNSRRAKKVLLKVIMALLASDLLRVRTVLFLEYNTLINSISLLTNDVLKRLRSTITRGKKTKAQVNTITNRWTLTIIVLTHYATALKCTIKNKRKKLVIYEEKVCFAA
complement(2582235..2582663)       PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; FO454_12430; phage(gi13487829)     5.02e-31            StaphylococcuslugdunensisMGRRTLYEKLDIKDKLDLVEGWKRDGLTDEQIARNFGVNFKTVMKWKEDHSEFMEAIKKGKEVSDYELENALHKRATGYYYEEETVTNAGKVVKVKKYEHANPTSLIFALKNRLPHKYRDKVEQEITNRNFEIKIGDYDDES
complement(2582969..2583385)       PHAGE_Staphy_Ipla7_NC_018284: RinA; FO454_12435; phage(gi399529178)                  7.82e-82            StaphylococcuslugdunensisMIVIQKHDIKKLEDYIKNIEEYRKEFLMRGYELMENHEPENIGAGKSNLPGNPIERETVKKLSDNRYVMLRNVVKGVDKLIFEADEDTKDLIRLRYWECPIGCYEWEDIANYFGISKTSVLRRRDAMISRLAEFIGYV
complement(2583528..2583710)       PHAGE_Staphy_StB20_like_NC_028821: transcriptional activator RinB; FO454_12440; phage(gi971746497)     3.36e-22            StaphylococcuslugdunensisMIKRILKIWFTIALYELGKWIGRELYYKLSANDEVDIAPNDYARITDQYDLDKIKKVFIE
complement(2583703..2583852)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12445; phage(gi122891750)     5.58e-05            StaphylococcuslugdunensisMTQFLITEIKHGQETFVDVTKPHDNEIYTLVEEESAEEARRKYEEGLDD
complement(2583889..2584404)       PHAGE_Staphy_EW_NC_007056: ORF024; FO454_12450; phage(gi66395831)                    6.49e-84            StaphylococcuslugdunensisMTNQLEIKLLSDKATMPTRDRLDAGYDIYSAETVILEPQEKAVIKTDVAVNIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYQGNLGINIKNDVDERYRKLKSTTYLNIKDECVERDYHDTKKLNSYKIYKGDKLAQLVIVPIWTPELKEVEEFQTESERGEKGFGSTGY
complement(2584423..2584674)       hypothetical protein; FO454_12455                                                    N/A                 StaphylococcuslugdunensisMREIIKLIIKSITRAILNRVIKDLLAGNQIAKHILKEIPDDEKGIVRACKKIGMSDIQTIGFITILGEEVGNNEEEIMKRFYK
complement(2584682..2584915)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12460; phage(gi122891747)     6.32e-15            StaphylococcuslugdunensisMVKIKREQIEQAIISASAFTGNDTEELLQEVDKVYKKAKALDDVVNIKKNSKFNSLIWIKTNEVIKNYEERIGRNGV
complement(2584902..2585342)       PHAGE_Staphy_CNPH82_NC_008722: hypothetical protein; FO454_12465; phage(gi119953732)     3.98e-33            StaphylococcuslugdunensisMTSIKELNIGDYIIFRRDNDNNSYPGEVLLKGHMTGQDTFKTFARVKVGNLTEPVMITDDDDFTVVEKTEDNVNSPSHYNYGDIEVIDYIEQVTAHYPSNLAYDIGNAIKYLSRATHKNGKEDIAKARWYVQRVFEKMGGLENGKD
complement(2585464..2585778)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO454_12470; phage(gi939535504)     5.93e-16            StaphylococcuslugdunensisMKALDLIEELQDAMEHYGDFDVKTERNEDIELKHIYSFQPEATAVINVKGRMPMVNLNGKRYRLCDVYKHFDVADSTVRKRYKQGLRGAELIYGKGHYFFEGDN
complement(2585775..2586182)       PHAGE_Staphy_StB20_like_NC_028821: endodeoxyribonuclease RusA; FO454_12475; phage(gi971746501)     1.14e-72            StaphylococcuslugdunensisMQLEIKFNDVFEAPIGSPRPRFRKSGKFVQTYMPAAYTKHKEYIKEQMPKLMIESKLKVSLLFCFEPPKSWSKKKKTTAIGQYKHTKPDIDNLIKTVLDAANSHLWKDDNQIVEIHSFKKFAEQAKVIMSLEEVE
complement(2586191..2586433)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; FO454_12480; phage(gi971766729)     3.17e-38            StaphylococcuslugdunensisMGIRENQLKAYNLYESDGWKMLRVLPRDDDTFYLANLGGMQKNKFKEYVNKDELAEIKRKYKLFRKEELQQQTTIDDYLF
complement(2586584..2587369)       PHAGE_Staphy_55_NC_007060: ORF016; FO454_12485; phage(gi66396129)                    7.74e-156           StaphylococcuslugdunensisMEAFQKLAKQAGFRNKIVKQEFGLHCNDCGRKYDYYEFDNGQIVKDGCDCDMIALAKVSTENYHKKQRKSKAEKIFKQSIINDNLAQVTFENYEPTSEKLKYAKGLCERYARNFTLDNKQSLLIQGSFGTGKSHLSMSIVKEVKAKGYTVLYMNVPQLISTIKNTYNNRNGMTEQELAQIISDVDLMVFDDFGINMNEFATSKMFELVESRVGKHNIFTTNLDEKEMTRNKDMQRIFSRIMSNTTLIKMDGQDYRTRGLKF
complement(2587382..2588140)       PHAGE_Bacill_vB_BhaS_171_NC_030904: recombination endonuclease subunit; FO454_12490; phage(gi100052)     2.80e-67            StaphylococcuslugdunensisMNKLLIDDYPIQVLPKLAVEIGLNEAIILQQMHYWLNASNHKYDGKKWIYNSYPEWQKQFPFWSLITIKRAIYSLEKQGLLHIGNYNKAKFDKTKWYSINYQTIESMIRPSYQNDTTSVSKRDDGVYQNDTTNTRDYTETSSETNNNSATDVTRERFEEWWKLYDKKKDKKLTFSKFKSCLKKHSFEQIMQGTREYIKTIKDKQYQKYPKTFLTNESYMNDYSEEMPQETSNQYTDAFERAAQSQNMENLPF
complement(2588137..2588352)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; FO454_12495; phage(gi971766724)     5.49e-25            StaphylococcuslugdunensisMPIIKNYIRQDDGTTTVVIEGVDIDNKTSLLLDNGLDVECEVKPVDPFKITDKQLGGCRRTTKQNAERRKM
complement(2588367..2588783)       PHAGE_Staphy_phi5967PVL_NC_019921: ssDNA-binding protein; FO454_12500; phage(gi431810257)     1.74e-59            StaphylococcuslugdunensisMNTVNLLGNLVADPELRGQNSNVANFRIAVQRPFKNKQTNEYETDFITCVAFGKTAEIITNNFKKGNKIGVTGSIQTGSYEKDGQRVYTTDVAVNQVTFVERKNSNAQSSNQPQQNRQAQSGNNPFDNGLEEFSDLPF
complement(2588780..2589454)       PHAGE_Staphy_Ipla7_NC_018284: erf superfamily protein; FO454_12505; phage(gi399529156)     2.67e-149           StaphylococcuslugdunensisMTEQLNLYQKIADVKANIDGFTKDTKGYNYSYVSGSQVLHRIRNKMIEHNLLLVPKTSEENYKQIEVTRFNKKASREVTTSEFVVEMKLTYLWINADKPEEQLEVSFYSVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKQKQEKYNKASSNTIGVLKQEVYQFVALMKSLGKEVTQQQAEKTFGIQEYASMTEQQAANTINKIQTMAKKYKENEQ
complement(2589447..2589668)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12510; phage(gi122891729)     1.22e-35            StaphylococcuslugdunensisMKQTITYLIKRKDDNLFVTNRPTEINDTIKYSTDRRDAREFAGLEDVSIDMTKHTAIKKTVTETTEYEEVEYD
complement(2589634..2589912)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; FO454_12515; phage(gi971755509)     8.08e-16            StaphylococcuslugdunensisMRHKLLQIANELNKHILHSDEEVRVEFQKFSDGEVGIFLFHHSDKYKRGCKHISFFEYHSIEEVQRNFEIAKGVIAGECLVDETDNYLLNQA
complement(2589982..2590161)       hypothetical protein; FO454_12520                                                    N/A                 StaphylococcuslugdunensisMKSLTIALITFVLISIITMVIFEIYFTTGLVVSAAIATVAYWFYSRHFFDKKTATCDNK
2590389..2590772                   PHAGE_Strept_315.2_NC_004585: hypothetical protein; FO454_12525; phage(gi28876256)     4.95e-13            StaphylococcuslugdunensisMDYFNLYKVILEACDNPSVTDGQELIDIISTHPYILELREKYEDDLIISKIIQILENGIDDNVIKGDYVINMDNNFHRISGLTTSGHLYLKTLSNNSSFSKFKNFAKNTSSKITVDSLGYLLRNYLQ
complement(2590720..2591031)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO454_12530; phage(gi122891724)     7.26e-53            StaphylococcuslugdunensisMNKLYKTPLLITMAVVTWKVWRIGNSKPTLGEVYRRNKPELPTVTLNKNGLFINDFRVPYVLEEGVNVKKSMNNLYTVSLVFFAKRIIADNYEADNPENQQLF
complement(2591045..2591242)       PHAGE_Staphy_29_NC_007061: ORF082; FO454_12535; phage(gi66396252)                    1.75e-26            StaphylococcuslugdunensisMLNLKELREAKGLSRYQLAKKTGLQNSTIRSAELENSNPGFLTVKKICDALKVDINKVKEIEQTT
complement(2591664..2592431)       PHAGE_Staphy_85_NC_007050: ORF016; FO454_12540; phage(gi66394886)                    3.09e-164           StaphylococcuslugdunensisMYNQQLPVHRLQTDMSYQSPVQERQVKKIVKNFDPKKLHTIVVSKRKDGSLYIIDGQHRVEALKELNILFIEATVHENLSVEEEAEMYYGVNDRPSKNANQKGKSRLRFKEPVAVAIDETVRSVGLNVDYEKNAPSKGYIKAYEALQSIYKNHGANHLGLVLEIIKDSFGDDTRNYQSFVLRGFSKLLTVYLNEIDLNILVTRLQKIGYEGFILEINKKQGGFETKKECLPFVVADIYNKGRRQNNQIDKMKLHV
complement(2592424..2593296)       PHAGE_Staphy_85_NC_007050: ORF013; FO454_12545; phage(gi66394883)                    1.27e-176           StaphylococcuslugdunensisMLIDINKVTVGKRIRKDYGDIASLADDIQDRGLINPPVVTPDYELIAGERRLEAMKKLDYKQIEVRVMSVEDQEHQLKIEISENEERKEFTYSEKMDYAKQLERIEAKKAKDRMAVKKQGKVLGPDLKKGKQTRDIVGKASGFGSGRTYDRAKYIYENADEKTIKEVDEGKKSIRKAHDELRAKEKVKEVDKVEAPVKEKPQTQVIDRRERMNAEVEAMSEAETNLALSEAAAANIVNVCSNLLYAVDNIEDLELTLNFLKSRDTEELSKVVKASKALNKIIEKGDFINV
2593343..2593552                   PHAGE_Staphy_85_NC_007050: ORF074; FO454_12550; phage(gi66394928)                    5.66e-46            StaphylococcuslugdunensisMSKHIYACLLGEWVNLSESENVVIDNSYTDANLWYKEVGHKMFDYNQMHIGYNGIDYFIHPSFIQVLTK
complement(2593751..2594542)       PHAGE_Staphy_phiNM_NC_008583: antirepressor; FO454_12555; phage(gi118430732)         1.63e-38            StaphylococcuslugdunensisMNEIQQLFNLKRNEDGTVAVNGRELHKGLEIGTQYDKWMERMIAYGFEENIDYIIQSVKVQSQKRLRTYEQLDHIMTLDMAKEISMIQRSEIGRKIRGYFIKVERQHNELASAYGINSLDDMNQLIEQLVSDKLDYLISTGQVSNQKLEELNNKFEGEYVTPQDIDAIKFAIKSKAEQILGKAGIQVTIDEFLIGDVYEQALANRKAKEEYRHQLGKVKSKLLVQSKKHLGMKGNAANNLIKRKDVDLVIQFIKDVRPSAIEL
complement(2594542..2594736)       PHAGE_Staphy_phiETA2_NC_008798: Cro protein; FO454_12560; phage(gi122891721)         4.96e-34            StaphylococcuslugdunensisMATTEFGMKVRMELLKRNITNKQLADMLGISSAYLSDILRGRRDAFEQKKRIAKILEIKEEVKS
2595016..2595354                   PHAGE_Staphy_phiETA2_NC_008798: repressor; FO454_12565; phage(gi122891720)           5.78e-41            StaphylococcuslugdunensisMNTFQRIQYLATNKGMSIAELERKLNLSNGSIARWKKSAPSSRGLTIIADYFDVSVDYLLGREKDEYAGEQEDEEIRIMHRGVKNMTKEDREKALKMFETFFDNWDEYTKDK
2595368..2596039                   PHAGE_Staphy_phiETA2_NC_008798: ribosomal protein; FO454_12570; phage(gi122891719)     7.07e-57            StaphylococcuslugdunensisMHFVYQNSFLKAARAVSALIETNYIDRFPLPIKEIIENDSNVELFTFEDFCNMTGYTLNELQTYGGSDEAFHIKKGNKFAIIYNDDVYHRRLRFTLAHEYGHYIMEHDGMSYEKTPIFQDSQRTHLEEYEANSFASCLLFPLNVRYKYRNVLSVGDAADLFKISYQAAKVALDIFDEHMDSGLEDHISMFEHRHMETYMSFLEEMLGEQLAEYNHIMRAEYGY
2596125..2596646                   PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; FO454_12575; phage(gi971755523)     1.58e-87            StaphylococcuslugdunensisMGVRNSNLEIRPTLSNLQFYIGQTDKPEHDPLLDFSLLYEHAELGVKFTLSGLDRINNPYSNNNEIYLVILLYDKTGDIGFELRNFWSLYLDEKNMQKKHENIQFTLYKFEPNSKAYDFTNIYQELKVIALPEEIKENNIDKDTMLNWMSNKQLNEVFATKIPIYHSKEFNDE
2596804..2597004                   PHAGE_Staphy_71_NC_007059: ORF042; FO454_12580; phage(gi66396080)                    1.76e-25            StaphylococcuslugdunensisMDNKYITKDVFEQFEKRIDDKLDSLPDRMADKMDAKISKFEARQTKCFVGVGVGLIGVLLKVFGII
2596939..2596951                   attR                                                                                 N/A                 AAATGTTTTGTTG
2597070..2598452                   PHAGE_Staphy_StB27_NC_019914: integrase; FO454_12585; phage(gi431809677)             1.84e-125           StaphylococcuslugdunensisMKVAIYTRVSSAEQANEGYSIHEQKKKLISYCEIHDWNEYKVFTDAGISGGSMKRPALQKLMKHLSSFDLVLVYKLDRLTRNVRDLLDMLEEFEQYNVSFKSATEVFDTTSAIGKLFITMVGAMAEWERETIRERSLFGSRAAVREGNYIREAPFCYDNIEGKLHPNEYAKVIDLIVSMFKKGISANEIARRLNSSKVHVPNKKSWNRNSLIRLMRSPVLRGHTKYGDMLIENTHEPVLSEHDYNAINNAISSKTHKSKVKHHAIFRGALVCPQCNRRLHLYAGTVKDRKGYKYDVRRYKCETCSKNKDVKNVSFNESEVENKFINLLKSYELNKFHIQKVEPVKKIEYDIDKINKQKINYTRSWSLGYIEDDEYFELMEEINATKKMIEEQTTENKQSVSKEQIQSINNFILKGWEELTIKDKEELILSTVDKIEFNFIPKDKKHKTNTLDINNIHFKF
