gi|00000000|ref|CP041726.1|  Staphylococcus lugdunensis strain SL118 chromosome, complete 2610930, gc%: 33.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
595964..596248                     PHAGE_Serrat_BF_NC_041917: L-shaped tail fiber protein; FO458_02880; phage(gi100266)     2.49e-06            StaphylococcuslugdunensisMLKPIGNRVVIEKKEQEQTTKSGIVLTDSAKEKSNEGVVIAVGLGRQLENGQRITPDVNEGDRVVFQEYAGTEIKQGNDTYLILNADDILAIIE
596308..597930                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; FO458_02885; phage(gi526178751)     9.13e-104           StaphylococcuslugdunensisMAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYAAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAIEALHDISQKVENKNEIAQVGAISAADEEIGQYISEAMDKVGNDGVITIEESSGFNTELEVVEGMQFDRGYQSPYMVTDSDKMTAELERPYILVTDKKISSFQDILPLLEQVVQSSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLELKDATMDMLGSANKVEVTKDNTTIVDGDGDNNNIDARVSQIKAQIEETDSDFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYKKVSDIQAEGDVETGINIVLKALTAPVRQIAENAGLEGSIIVERLKHADSGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEPESNNQPPMCGGMPGMM
597999..598010                     attL                                                                                 N/A                 CAGAAAATAAAA
complement(598045..599220)         PHAGE_Thermu_OH2_NC_021784: integrase; FO458_02890; phage(gi526118367)               1.64e-100           StaphylococcuslugdunensisMASYDQISKNNWRYRISLGKNTETGKYEYISKTGFKRKSDAKHQAEMIERQLRNGDYIAPSSSTFKQVAEDWIKQYANDVKVSSVRAREKAIQHAIQHFNTKPIQTIKKHDYQRFVDDMSMQYSKNYVDSIVASTNMIFKYAHDMRLIKVMPSEGIKRPKKKVSVEELEDIEIHKKFLEKDELFQFLEVAKYHHSPLNSFEVFTTLAYTGMRAGELLALKWSDIDFENNTISITKTYYNPNNNKKHYQILTPKTESSIGKISVDPHVIQLLKDYKVNVQDTWKNGLYVDNNFVFTDVNGYPLVIKKLSTWIQAIMKKTDITNKHISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSQLMENVSKELF
complement(599229..599756)         PHAGE_Thermo_THSA_485A_NC_018264: transcriptional regulator, XRE family; FO458_02895; phage(gi397912657)     3.36e-13            StaphylococcuslugdunensisMNIGDNIKKIRKEKKVTQSELASSLKISQSYLSDLENNRKNLGIKTIEKIAKKLNVSVAYLTSGNKMLSDLTEDEINEQFSELRFKLNKDNTNRELNLKSNLLDLIQRDLKYIDIHYFNNVYNFYELEKTEDDNLLFISVLLQMLHQHKMSGSKEAYDDITNEFNDFLKSYLNIK
599989..600168                     PHAGE_Lactob_LBR48_NC_027990: putative transcription regulator; FO458_02900; phage(gi937456709)     2.65e-06            StaphylococcuslugdunensisMFLKGYDLSDLSIKTNVSKAYLSQIFNGKKIPSPKLAKNIANTLDVEIKDLFYFEEQEA
600172..600486                     PHAGE_Mycoba_Jabbawokkie_NC_022069: Xis; FO458_02905; phage(gi530547147)             3.74e-06            StaphylococcuslugdunensisMFNINIDEDEARALLEQAINERVDELVNEKYFITYKELAEYLNLSKPTIEELLINNGLKYYMVGSTYRFKKSDVDEFMEKITSHMDIHNNDLKQINVKKLLSTK
600499..600708                     pathogenicity island protein; FO458_02910                                            N/A                 StaphylococcuslugdunensisMKQQVVITKSVVGWFNVKDVEGNLLLNIAPDVFKENFPEVSPDISIACMELELNRIVELKEKKKKKASV
600712..601116                     pathogenicity island protein; FO458_02915                                            N/A                 StaphylococcuslugdunensisMEIKQKYQLSKVVKVLEKVLYEKDKDVFLSAKDRFHSITDYRYDDTAFYEHILKLIHKELFNILVELDFEDEAFYILDEVTMTLSDVMNEDKEIYYYTVTDSTGEHEHTTDREGHVIGILEWALDYIVGNIEVE
601121..601324                     hypothetical protein; FO458_02920                                                    N/A                 StaphylococcuslugdunensisMAAKLDVNKQNIMHAINWIIKNEEEIIFESPSQLSFFSREDLEKIDYCKRTLESLIEAKEIYNKKIS
601339..601644                     PHAGE_Staphy_PT1028_NC_007045: ORF016; FO458_02925; phage(gi66395180)                2.22e-20            StaphylococcuslugdunensisMEWELRNLFDDLEVVQEKINDVVTSFVWFDDEYFTHEPNHMLTKKEIYTHGWKYHEHRIKNTQVIDLMLMYMRDFDDIMKKIREIEKCASDVSLPTESDNA
601704..603311                     PHAGE_Staphy_PT1028_NC_007045: ORF012; FO458_02930; phage(gi66395176)                1.31e-63            StaphylococcuslugdunensisMDEVSLYKKHFEFHSNLDYINTANLSRIKEISKRINFASISTDKQVFDNKGNVYHRKKDDFAGDYINNLTLNYTIKPKEIGLVYGRIFVKTNDQDEKEAHFKSDHFNNYARFIADLISDKVIYSKELDNFLIVKNNQYEVIDDTNFKLSYPVEPKHQIDDFLDIMLELYRERLNLDHNYKIYPYSVAGNDFIYSCKTLKLTKDKPQDNELYAIKYDVNYKDLDFKTPNDFYDLVTDNDKSKHNLKLVHAYTMYRKMKLIQAEKWFLFKDFGRSGKGLFITTFNKLLHVNKVNFDGLVSGGFEAANEWMNFYGADIAHANETGEITKPMMRILRKIATGETISGRGIGRNAFTFKNKSVLILDTNESVDTGEITANTTRTIKIAFKDRPHGETDDERYKIFEPYWNFVQPNDEDSEVASVSFLITSLEYLKEIGREFRFKDVTLKHYFSEEELTETQVVMLKVLSKQGFILSGDETLQRLIEEDYKSLRYNKAKIDMKKIGVGINNQKWIDGINMKVHEIENSELFNMALDLLDKG
603831..604634                     PHAGE_Staphy_PT1028_NC_007045: ORF004; FO458_02935; phage(gi66395168)                2.48e-153           StaphylococcuslugdunensisMTGYHVAKQLLKKNIEVIPLNKYKTPTVSFADKDVTDEFIEYHSYKYHQTNVLGVLTRNVWCIDIDIDHTDGENGFKSIKDIPYYDEIVSNAQNTLVQTTASGGKHIIFYKRNGINYGQKIGYLPGIDIKAHNNSYFVLAGSRTDKGKYKHNGIKPKMYQGEFEHRIFSKQGNYMQQTLEPYSIKNMLPNQNFAHVRGGKGGLGKQAYQRIVNGESEYRNNDLYKAASYAKQCNIDIEPLRILIGDNKNGDVFDERSWEATVRSAGY
604621..604896                     PHAGE_Staphy_PT1028_NC_007045: ORF017; FO458_02940; phage(gi66395181)                2.29e-34            StaphylococcuslugdunensisMQATNIEINYDKQAEKIELIVGIPEEMYFCSISKISAVYVEYIDKKWVVWRESYVPNTNRRTSYKFIAHGGFELVMARTKNYLGYIKKNRG
608534..608545                     attR                                                                                 N/A                 CAGAAAATAAAA

#### region 2 ####
complement(1406671..1407783)       PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; FO458_06910; phage(gi326781943)     1.32e-10            StaphylococcuslugdunensisMAPKLQAQFDAVKVLNETQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAISVGIPGIQVDGMDPLAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKDDIKKAIKEADKVEKQKVTDLMDIMYEEMPQNLAEQYEIYKEKESK
complement(1407950..1408579)       hypothetical protein; FO458_06915                                                    N/A                 StaphylococcuslugdunensisMKLYRALGVLLASTLLLAGCTTDRKEVRAYEDTIQQASSNEQVINSTGQKLNDLEKQKQQYYKKIVTNNPDTRVKVADKMISNINERSKEFNKEVKAMNASNKEFKKASKHINQIKDDSKRKELKELDDALKDKYKKHDDYAAAYRNILDKERSYFKLLKQKTVMQQQEKEKGEAINKAQKTFKQKFEAYIKALNKVNKEKGDIDKISE
1408717..1409268                   PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; FO458_06920; phage(gi100217)     5.15e-10            StaphylococcuslugdunensisMLTMKDIIKDGHPTLRAEAQDVDFPLSDEDKQTLKSMREFLINSQDDEIANRYGLRSGVGLAAPQIDISKKMIAVYLPDDGNGRSYDLMLVNPKVVSYSVQYAYLPTGEGCLSVDKNIPGLVHRHYRVTVKAKDIDGKDVKLRLKGYPAIVVQHEIDHLNGIMFYDHIDAEHPLTPLPDSIEV
1409703..1409921                   DUF1447 family protein; FO458_06925                                                  N/A                 StaphylococcuslugdunensisMAIFKVFYQHNKNEVIVRENTQTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSEHFNVENAE
1409921..1411600                   PHAGE_Cellul_phi19:3_NC_021789: metallo-beta-lactamase domain-containing protein; FO458_06930; phage(gi526176949)     3.62e-05            StaphylococcuslugdunensisMKQLHQNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRNAELIEITEDSVIKSKHFEVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAQLGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKIHHIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGAEVIHSKISNIHTSGHGSQGDQQLMLRLIQPKFFLPIHGEYRMLTAHGQTGVDCGVPEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNSNKDIQWHQIKSSIIETLQPYLYEKTARKPMILPVIMKVNEE
complement(1411698..1411871)       PHAGE_Staphy_Pvl108_NC_008689: putative transposase; FO458_06935; phage(gi119443708)     3.19e-22            StaphylococcuslugdunensisMTQLTLPMETSILIPTNDISRYVNEIVEIIPDNEFKHHRGATSYHPKMITSCILSNT
complement(1412184..1412843)       TrkA family potassium uptake protein; FO458_06940                                    N/A                 StaphylococcuslugdunensisMDKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDEARVNEYSDIATHAVIADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELSDEHSLVELKASEKMAGQSIVNLDIRAQYGINIIAIKRGKEIIVSPDPNINIEIGDILIMIGHDNDLNRFEKKIVR
complement(1412912..1413928)       cytochrome d ubiquinol oxidase subunit II; FO458_06945                               N/A                 StaphylococcuslugdunensisMAYTGISMLVLWICLFFYVIAAGIYFGTGCFAFYMHMSGEEKKSKVLYKYMINPIWGLINICCVFCYVGMIALFPSAIHYLNTMILIPGSIALICIIIRGCSYIFINKRADISLPWLLIYCLSGLGIPAALASVLTISEGGYIVEDGAHLDLNWVQLVISPFAWSVVFLAVITVLYISAGFLTYSAAKLKDTHVYLTVRKWLLLWSMPMIMVSLFVFLSLRIQNANHFTNAIYNYWWMFTLSLLCFIIAMSLALLKKYHGIAMLMMILQLFFAFFGYGLSKLPYIVYPFVKITDTTVSVATGLTLMIVIILGLLLLIPSLILLLRLATDNKGIVKNQK
1414239..1414472                   PHAGE_Bacill_G_NC_023719: gp80; FO458_06950; phage(gi593777548)                      4.19e-10            StaphylococcuslugdunensisMAHITLYTQDDCPPCSFIKNYLHEHQIPFEEKHIKHQAYRVEMLDYDAFATPFILLNDEPMYTVDIDKINHAFNITV
complement(1414568..1416283)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; FO458_06955; phage(gi100140)     4.79e-05            StaphylococcuslugdunensisMSNLINGIAASDGVAIAKAYLLVEPDLSFTNEKITDIDAEINKFKNAVEASKIELTKIRNNAEKQLGADKAAIFDAHLLVLDDPELIQPIEDKISNEKVNAPQALNEVTSQFITIFESMDNEYMKERAADIRDVSKRLLAHILGVELPNPSIIDESVVIVGNDLTPSDTAQLNKDFVQGFVTNIGGRTSHSAIMSRSLEIPAVVGTKSITHQVKQGDMIIVDGITGDVIIDPTEDELIAYQHKRERFFEDKKELQKLRDAETVSLDGIHAELAANIGTPDDLYGVIENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQPDIFRPQLRALLRASAYGKLNIMFPMVATINEFRDAKALLLEEKENLKNEGHDVSDDIELGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAINCSTQEQVKELVHNIAR
complement(1416286..1416552)       PHAGE_Bacill_G_NC_023719: gp197; FO458_06960; phage(gi593777654)                     9.19e-07            StaphylococcuslugdunensisMEQKSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEADAIQSISDVLSKEGLTE
complement(1416704..1417246)       DUF697 domain-containing protein; FO458_06965                                        N/A                 StaphylococcuslugdunensisMGIRQNLSNRITTKVGQKVFKIEDIKEKNAMPTTQDELARCRERAEAIVKRKSLMSSTASVVPIPGLDFGVDIKLMRDIIEDVNKLYGLDHKQVNTLGDDLRERIFAAAAIQGSQFIGKKVSSAVLKIVIKDMAKRAAAKQTRWFPLVGQAISASISYYFMNKLGQDHIEKCEKVIKDII
complement(1417301..1418473)       PHAGE_Strept_20617_NC_023503: methyltransferase; FO458_06970; phage(gi588295144)     3.71e-88            StaphylococcuslugdunensisMKTAIINKGKEQKYLNHYPLVDEEDIFRQDHLKEGDLFQLTTDQGRYIATAYVGRQHKGLGWVLSYNPSEEITTSFFTQLFTDALAERDYYFHIDGTNAFRLFNAEGDGIGGLTIDNYNGHLLVQWYSKGIYKFKFEILQAIETVFPYKSIYEKMRFKDADYSGGFVKGEAPQFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDQYAEQKNVLNLFSYTGAFSVIAANHAQSTTSVDLANRSRALTEENFGLNGIDPKTQFIYVMDTFDFYKYAHRHNRFYDTIVIDPPSFARNKKKTFSVQKNYDELINGALSVLAPNGVLLLCTNSSIFSLKAFKSVIKSTLEQANVDYEIKEVMGLPKDFKTHPHYKPSKYLKAVFIQIKN

#### region 3 ####
1865639..1865651                   attL                                                                                 N/A                 ATTTTTTACTTTT
1871367..1871741                   PHAGE_Staphy_TEM123_NC_017968: hypothetical protein; FO458_09155; phage(gi388570338)     2.78e-17            StaphylococcuslugdunensisMLLTREPLPNNKLNALDNTKIVDCPKPNLATNAANLVINGAIKVVTPTILGINAIKAPPRDIETPSTLAIAGCVSNNLANQPAKAVTAFKTCAAIGAIAIPKLTKAIAMLPINCMITGPFWFIY
complement(1873376..1873741)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO458_09160; phage(gi122891769)     1.36e-30            StaphylococcuslugdunensisMSQLKIYDMQEIEKLTLTEYYYRMWAREYERLDQIQQMFDLAFSIRNAQLTENIGTENKPEERYMFNDSSDLLNYEENIKRLDKGLSIKFEEKGKDVEQAMSLKDKLKLVAQVNKDAKGKE
complement(1873786..1874151)       PHAGE_Staphy_StB12_NC_020490: tail assembly protein; FO458_09165; phage(gi939535535)     4.92e-48            StaphylococcuslugdunensisMYINFKGKELELSFGLKFLRIIDKVMAMESENISFGQGTQMLVPRLEMADAVSLSYIIEAATAHHSKAPKTESELETVIEDIAEEHGIEEFCQDIIKELGKRVMTQNLVPDEYKEAKKAKK
complement(1874226..1874789)       PHAGE_Staphy_StB12_NC_020490: major tail protein; FO458_09170; phage(gi939535534)     3.65e-82            StaphylococcuslugdunensisMPQKSGKDELVLLRILGEKVDAEKVMLVTEHSRSTEKDKDSVETMDGSISAGGSLESTVKFTAHMDVQDKLSDEIEDAVEDDIAYELWFINRQVKNTEGKYKAEYRQGYFTSFERKNEADGIAEYEAEYAVFGKKKRGYATLPKLIEDNKLAYGFHDTVKTDPANDGLASIPQPTESGTGGTGTPVL
complement(1874807..1875193)       PHAGE_Staphy_Ipla88_NC_011614: hypothetical protein; FO458_09175; phage(gi215401216)     4.09e-28            StaphylococcuslugdunensisMQSPQLQLYNKTFDLAKGYDIPVISQKEMTEDISYPFVVLSRSDGRMNIGSFDTIDGQTSVTIDIWSLESDLGLHDSIVYGLQVDLSQLETLPNYQVRLNDITVNQISEDTTNQSLAHSQIVAEFDTY
complement(1875204..1875545)       PHAGE_Staphy_TEM123_NC_017968: hypothetical protein; FO458_09180; phage(gi388570343)     3.91e-40            StaphylococcuslugdunensisMNLDALIEHFEFMEDNIEDDVNEVVRNVAIDSVSIAKNNAKRVMNKGYWTGNLWREIESAKSGKLSYKITSNAGYSGFLEFGTRYMEAEPFMWPTYLEVQKNLVEDLKELLEG
complement(1875545..1875847)       PHAGE_Staphy_StB12_NC_020490: minor head protein; FO458_09185; phage(gi939535531)     1.03e-29            StaphylococcuslugdunensisMRYNDRITFMLESKGAYNTKTSKYEPKTTTYDEEVCNINPLSMERLAVEFGDITKDIMVARLQGDYDNTVSHALVNNIKYKVVTQKHYIHDTVFYLESVN
complement(1875844..1876173)       PHAGE_Staphy_StB12_NC_020490: DNA packaging minor head protein; FO458_09190; phage(gi939535530)     7.78e-44            StaphylococcuslugdunensisMATKENVKVLLGLKDDKQDNVLDIIIKNTESRLLSKLPINLERVPDNLSFIVEEVAVKCYNRIGAEGMTTESVEGRTNTFQANDFDEYQTIIDELYPKENGSKGSIKFY
complement(1876183..1876422)       PHAGE_Staphy_phiMR25_NC_010808: hypothetical protein; FO458_09195; phage(gi189427170)     5.28e-08            StaphylococcuslugdunensisMVCLVASNFKDKTDNERLYLKGDVYSCDDDQRIKDLKGNGYLVVVNEQMTKKDIVDTLSSINIVVEDDKTKADILSDLE
complement(1876437..1877342)       PHAGE_Staphy_StB27_NC_019914: major head protein; FO458_09200; phage(gi431809710)     1.93e-152           StaphylococcuslugdunensisMAAEPNLIDVKALGEAKSIDFANRMGIGLNKLFEALSITNKIPMNVGSAIKQYRFKIVDSTAPDGNVAEGDIIPLTKVEREQVKITELKFKKYRKSTSAEAIQSHGYDLAINRTDNELLRYVQKNFRKDFFNSLKSALDSADRTNKAALTGKNLQGALAKGRANLSTLLDDEITPIALVNPNDVAEHIANGFINSNGAQFGLNLLTPYVGVRVIEFADVPAGEVWMTTAENLNVAFANPRGELSRAFAFATDETGFVGVLHDIQPERLTADTVFASAISMFPENIDAVVKVTIKAETAPVV
complement(1877362..1877952)       PHAGE_Staphy_StB27_NC_019914: scaffold protein; FO458_09205; phage(gi431809709)      7.53e-74            StaphylococcuslugdunensisMAEETKSNVTEETEVKEQTQENQDETSNDKTKQSKDTDKTFTQEEVNQMIKERVAREQKKAEEKAEEAAKLAKMNKDQKAEYEREKMEKELQQLRAEKATNEMRSEARAMLKEKNIDASDELLNFVVKEDANGTKESVDAFVDLLNGMVKIQVKEALRQESPKAFTTSGLTKEDILNIKDDSKRQIAIAQNRQLFN
complement(1878272..1879237)       PHAGE_Staphy_StB12_NC_020490: minor head protein; FO458_09210; phage(gi939535524)     5.91e-83            StaphylococcuslugdunensisMSKSDAQWWELAQKGIVQEVKRDKAAIKDIEMLLMTMIKEIEKEIMSFYAKYANREGLNIKEAKKKVDSFDVEAFKNKAKRYVETKDFSDKANKELKKYNIKMYVSREELLKGQLNGLIDYFTAETENKLSDYMHDAVEREIKRQAGILGDNVEITPQKVTSIVNADFGNTTWSKRLWSNMDELRDDVQRIASHVVLRGRHPNEFVSELRKKHDVATSDAKRLLITEAARVQTLAQKEYYTATLVEDARYQFVAKVDERTSKTCLSHNGNIYKVKDMTPGLNAPPLHPHCRSSTIPFAPTRRKDFINSRKGRYTGAKVTIK
complement(1879224..1880669)       PHAGE_Staphy_StB27_NC_019914: portal protein; FO458_09215; phage(gi431809707)        0.0                 StaphylococcuslugdunensisMTLYTVGNVQEKFSPTANDDFVVNDLDELFKDDYIRNLISRHKTEQLPRLEMLEAYYLNRNTDILTGERRLNNNGDKADHRAVHNYARYVSRFIVGYLTGNPITITHKNNKTNNKIIELNDKNDADEINSDLALNLSIYGRAYEIVYRDMKDNDTFRVLDPKSTFVVYDSSLDKRVIAGVRYYEKSDANNIPTSYIEVYTKQDIYYLEVKDGSIVVNDVVKHFYNEVPVIEYLNDQFKQGDFENVISLIDLYDASQSDTANYMSDTNDAMLALIGNADLDGEDAKAFRDANMIHIKPSINANGGEGKADAKYIYKQYDVSGSEAYKKRLQNDIHKYTNTPDLNDENFSGVQSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNKVNIESFENHDYSELNIAFTPNLPKSLKESVEIFNDLNGGVSEETRLGVLDIIKNPKEEMKKMEKEKQIQSRDNSEYSNLTNDNKEDVNIDVEE
complement(1880681..1881565)       PHAGE_Staphy_StB12_NC_020490: TerL; FO458_09220; phage(gi939535522)                  3.46e-152           StaphylococcuslugdunensisEEAYQIETFDKFSTVTESIRGSLDAPDFFKQITVTFNPWSERHWLKETFFDEDTRLKNTFSYTTTFRVNEWLDKVDIERYEDLYRTNPRRARIVCDGDWGVAEGLVYDNFEVVDFDWLAKLKETQFKVHGIDYGFTNDPTALISAVVDLSKKEIYIYDEHYEIAMLTDDIYNMLVDKGLKDAEIKSENEARLIAELNLKGISKLVPASKGPNSIMTGVQYVQGFKIYVHPSCVHTIEELNTYTFDQDKEGNWINKPIDKNNHALDALRYALSDLIFKPIEKPDAKKLRRIKNMF
complement(1881748..1882284)       PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; FO458_09225; phage(gi148750836)     8.89e-37            StaphylococcuslugdunensisMNEIWKDIEGYEGLYEISNLGRVKSLPKMSGSCMRKEKILNSKNRLTKDGYARVNLHREGKGKDFRVCRLVATHFIDNPDNKSTVNHINGIKTDDRVENLEWATSNENMKHAYDTQLKKGMKGETNSQSKLTMEQVETIRKRYKRYSKTDGTVAIARDYGVTPRVINQIVNNKSYKID
complement(1882424..1882813)       PHAGE_Staphy_StB12_NC_020490: TerL; FO458_09230; phage(gi939535522)                  2.71e-75            StaphylococcuslugdunensisMTNVNIARKIGGGYNKFWHNKNMYRVVKGSRGSKKSKTTALNFIYRIMRHEWANLLVIRRYSNTNKQSTYTDLKWATNQLGVTHLFKFNESLPEITYKPTGQKILFKGLDDPLKITSITVDKGLLCWAWF
complement(1882806..1883300)       PHAGE_Staphy_StB12_NC_020490: TerS; FO458_09235; phage(gi939535521)                  1.14e-87            StaphylococcuslugdunensisMDNLNKRQKAFAEAYCIPGSDCYGNATRSAIRAGYSEKTAYSQGQRMLKNVDVKSYIKGVEEKLFDEKIMSGKEVLYRLTRTARAETVEVEAIVTKKGIYKVNPTTEKHNLVYDEDVNLVEKPPKISDQNKALELLGKHHKLWTEKLEAEVTTPTFIEDVPEND
complement(1883605..1884021)       PHAGE_Staphy_Ipla7_NC_018284: RinA; FO458_09240; phage(gi399529178)                  4.29e-82            StaphylococcuslugdunensisMIVIQKHDIKKLEDYIKNIEEYRKEFLMRGYELMENHEPENVGAGKSNLPGNPIERETVKKLSDNRYVMLRNVVKGVDKLIFEADEDTKDLIRLRYWECPIGCYEWEDIANYFGISKTSVLRRRDAMISRLAEFIGYV
complement(1884321..1884473)       PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; FO458_09245; phage(gi509140972)     1.25e-05            StaphylococcuslugdunensisMTQFLITEIKHGQETFVDVTKPHDNETYTLVEAERAEDARRKYEEGNNGQ
complement(1884481..1884834)       PHAGE_Staphy_ROSA_NC_007058: ORF033; FO458_09250; phage(gi66395997)                  6.84e-34            StaphylococcuslugdunensisMNYAFKIIIPMMIVFLICSFLFYTTYSVVSYFHKETFTGTITDKYTKRNNSEDDFFIVLDDKKVIMNTDITMKARFNSADVQAELNKGDKVRVKTIGYRIPMLDTFPKMYEVKILKE
complement(1884907..1885401)       PHAGE_Staphy_TEM123_NC_017968: dUTPase; FO458_09255; phage(gi388570353)              9.73e-72            StaphylococcuslugdunensisMTNQLTVDQLEELLQIQKDFDSRIPTLNLQDSRIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSIANQTDIDEWLLKDKIGSYDGSFTGLNADRILAHLANIDDYNNQVPITFGIAEEYYTIDQLITAYKKKMERNHARQDGTADKDKGYV
complement(1885422..1885547)       PHAGE_Staphy_Sap26_NC_014460: hypothetical protein; FO458_09260; phage(gi304443291)     1.39e-15            StaphylococcuslugdunensisMTKREQIEQAIISASAFTGNDTEELLREVDKVYKKAKVFDEI
complement(1885548..1885920)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO458_09265; phage(gi939535502)     1.47e-11            StaphylococcuslugdunensisMVKIKREVEMTLPQLIEWGWDNSVRDKEFCNDCGGRVHFRLSGLCEVAYVGEHETFTVEVEEEITEEKSIKRNIHVKYKESIIYKKKYRFSGKKTSCEGILCQRQQLYDAHLERRGVGEVA
complement(1885924..1886346)       PHAGE_Staphy_CNPH82_NC_008722: hypothetical protein; FO458_09270; phage(gi119953732)     1.57e-31            StaphylococcuslugdunensisMTSIKELNIGDYIMFRRDNDNNSYPGVLLKGHMTGQDTFKTFARVKVGNLTEPVMITDDDDFTVVEKTEDNVNSPSHYSYGDIEVIDYCDQVCKQYSPELAPYVFNAIKYLSRANHKGGKNDIAKAKYYIQRLFDKWEG
complement(1886352..1886603)       hypothetical protein; FO458_09275                                                    N/A                 StaphylococcuslugdunensisMVKIYERNEGSLSSRQLYLIQQAERRHERMLMLKRKEQRAEKERRSKELVKQHKVKSEWFDYLCKNNLLTKLKTDLYGRDQRG
complement(1886606..1886920)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO458_09280; phage(gi939535504)     2.47e-16            StaphylococcuslugdunensisMKALDLIEELQDAMEHYGDFDVKTERNEDVELKHIYSFQPEATAVINVKGRMPMVNLNGKRYRLCDVYKYFDVADSTVRKRYKQGLRGAELIYGKGHYFFEGDN
complement(1886917..1887324)       PHAGE_Staphy_StB20_NC_019915: hypothetical protein; FO458_09285; phage(gi431809750)     4.34e-72            StaphylococcuslugdunensisMSKYNAKKVEYKGHVFDSVVECEYYQYLENKMNGVTYNRIELQPRYELIPKTKKQRKTEYIADFALYLDDELIEVIDVKGMATEAAKLKAKLFRYKYPDVTLTWICKAPKYTGLEWITYEELKKVRRQRKKELKR
complement(1887334..1887573)       PHAGE_Staphy_phiRS7_NC_022914: phi-ETA orf24 like protein; FO458_09290; phage(gi560186002)     4.32e-13            StaphylococcuslugdunensisMGLLEGAEKQYKLFDGSGDVAFVVYPLAENSNCLISKSGWRYTSKTAFNLTDKELLAYKEKHNLFYDYELDMQMSIFDI
complement(1887728..1888498)       PHAGE_Staphy_ROSA_NC_007058: ORF015; FO458_09295; phage(gi66395980)                  4.38e-131           StaphylococcuslugdunensisMQSIGSLARNIKPNQNIVEEQHNLKCERCGNRYDYYKFSNGHEFRHGCDCAMIQAGKEAEKKRRQKYINNIFNQSRVNHSLHDATVNSYKPQNKQQIHAKNTAIEYVKTFSVDKPKSLILQGSYGTGKSHLAYAIAKAIKNEGYTVAFMHIPMLMERIKATYNKNATETTDELVKLLSNIDLLVLDDIGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKHLNQDMNWQRINSRMKHNARTVKVLGDDYRERDVW
complement(1888509..1889273)       PHAGE_Staphy_80_NC_030652: hypothetical protein; FO458_09300; phage(gi100017)        6.99e-131           StaphylococcuslugdunensisMATFRTIKESGDFVTVHKSFIFDSNLSAKAKGILLYFLSRPDNWQIYTSEVVKHMNDGQKSINSGIQELMKHKYVHRIQKRTEAGIFNGYEYLVYEKPTEMPFSENGLSANGFSENGKTENRKGQTTNNNRTNNDLTNIDNTNIDENILSSSSTAYPKDVIDYLNQQTGKQYKSTTKKNQTVIRARIDEGFTLDDFKKVIDNKVTEWKNSDMAKYLRPETLFGTKFEGYLNQELQPSGMDQLNRMKYDESYWD
complement(1889273..1889938)       PHAGE_Staphy_Sap26_NC_014460: hypothetical protein; FO458_09305; phage(gi304443281)     2.35e-132           StaphylococcuslugdunensisMQHITRYQKDNDGTFSVVATGVELEQSHIDLLDNGYSLNAEVEVPDNKRLSIEQRKKIFALCRDIELHWGEPVEALRQRFQTELEIMNGYEHISLSNCSMKIAKELIELIIAFMFRHQIPMRVETSELLSGDKAMLYWATVNRNCVICGKQSSDLAHHYAIGRGANRKTMNHYDYEVLALCREHHNQQHNIGVESFDKLYHLENSWLKVDDRLNAMLKGVK
complement(1889951..1890505)       PHAGE_Staphy_80_NC_030652: hypothetical protein; FO458_09310; phage(gi100014)        1.33e-112           StaphylococcuslugdunensisMKITGKATHIKETNQEAFLKGGDFLGAGEFTVKVKAIEANDREGRYFTIVFENNEGKEFKHNQFVPPFQQDYQEKQYIELLSRLGIQLNLPDLTFDTDQLINKVGTIVLKNKFNKEQGKYFVRLSYVKVWKKGDEVVNKPEPKTEEMKREEQQAKGQQTSMSQESNPFANANGPIDIDDSMLPF
complement(1890508..1890684)       helix-turn-helix transcriptional regulator; FO458_09315                              N/A                 StaphylococcuslugdunensisMAKKDKKISDVWREADIARSTLTDLSKGKTKQISFSTLEKLSNYFEIETYKLFKKDGI
complement(1890716..1891495)       PHAGE_Staphy_phiETA_NC_003288: hypothetical protein; FO458_09320; phage(gi17426245)     8.87e-178           StaphylococcuslugdunensisMTEQIEEQVDILSQLGVKDISQQNANKFYKFAIYGKFGTGKTTFLTKDNNALVLDINEDGTTVTEDGAVVQVKNYKHFSTVIKMLPKVIEQLRKNGKQIDVVVIETIQKLRDITMDDIMNGKARKPTFNDWGECASRIVSIYRYISKLQEAYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIKKAVISQSDVLARMTIEEHEKDGEKSYQYVLNAEPSNLFETKIRHSSNITINNKRFTNPSVSDVVEAIRNGN
complement(1891488..1891709)       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO458_09325; phage(gi122891729)     4.58e-36            StaphylococcuslugdunensisMKQTVTYLIKRKDENLFVTNRPTEINDTIKYSTDRRDAREFAGVENTIIDMTKHTAIKKTVTEKTEYEEVKYD
complement(1891675..1891953)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO458_09330; phage(gi939535490)     7.01e-12            StaphylococcuslugdunensisMRHKLLQIANELNKHILHSDEEVRVEFQKFSDGEVGIFLFHRSDKYKRGCKHISFFEYHSIEEVQRNFEIAKDVIAGECLVDETDSHLLNQA
complement(1892012..1892191)       hypothetical protein; FO458_09335                                                    N/A                 StaphylococcuslugdunensisMKSLTIALITFILISIITMVIFEIYFTTGLVVSAAIAIIAYWFYSRHFFNKKTATCANK
1892417..1892905                   PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO458_09340; phage(gi939535487)     1.21e-16            StaphylococcuslugdunensisMEFIQSTLFSNIIAVVALLCSFWSIRYTYKQNRYDLVVSGFTSEKIVGIPLYFCFDILNTSNKGIHINRLELIKDGQVINDLRFKPTTELIMRYPKPDKSPLYRKNLNTKTFLAPYSKETYKYHLPTIPDSIRLYADERFYRFKKSKLFVIKLNEVEQYNEI
complement(1893221..1893952)       PHAGE_Staphy_55_NC_007060: ORF018; FO458_09345; phage(gi66396131)                    4.36e-177           StaphylococcuslugdunensisMQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVSTRYDKWFERMTEYGFENGIDFISQVEKVHGQKRARTYEQINHILTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMKRALKMANNTINQLETQIEKDKPKVLFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFKWLRQNGFLIKRQGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFVNKF
1894010..1894273                   PHAGE_Staphy_StB20_like_NC_028821: CRISPR-associated endoribonuclease Cas2; FO458_09350; phage(gi971746517)     1.31e-41            StaphylococcuslugdunensisMKSYIISYDLNDHKDYPKLINRIEDYPNAAKINKSVWFVNSVFSSKEIRDELKLFFDNDDSLFVATLTGEAAWKNVICDSKHLKDFL
complement(1894452..1894721)       PHAGE_Staphy_StB20_NC_019915: transcription repressor; FO458_09355; phage(gi431809734)     4.76e-58            StaphylococcuslugdunensisMKTLKELRTDYGLTQEELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMNAFNVKYDDIFLGNEYENFVFMNDKKKSIILAFKEKEHQTS
complement(1894734..1894893)       transcriptional regulator; FO458_09360                                               N/A                 StaphylococcuslugdunensisILLAIILLRSLFIFNYLLVSYYTNFSYSKVFYEKNVFCVDNTKKSYYISITEA
1894856..1895572                   PHAGE_Staphy_IME_SA4_NC_029025: transcriptional regulator; FO458_09365; phage(gi971766713)     9.28e-154           StaphylococcuslugdunensisMNKERNKIIANNIRKYVKESKMTQKQLAELIGITPSTLSDYLNLRSNPSHGVIQKIADVFGVVKSDIDTTYKEVNDITTVYNQLTPPRQHNVLDFANHQLELQNSTSDNVIDLDTYKNENTTLTNVNGYVSAGTGEQIFDEPIFKVNVKGYVPPHDLALQVNGDSMEPLFDDKQVIFIEKTNHIDNGQIGVFIIDGEAYVKRVFVEENRLTLVSLNKDYRDLHFYRNEGVKLVGKVIL
1896053..1896235                   PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; FO458_09370; phage(gi209363556)     2.08e-12            StaphylococcuslugdunensisMIILNCKIKSNEIVYEVKTNKNNYFTYSLPKDITSYKVRKVLKIIESKVDEDEDYLSKGG
1896389..1897429                   PHAGE_Lactob_iA2_NC_028830: Abi family protein; FO458_09375; phage(gi971747652)      6.43e-26            StaphylococcuslugdunensisLKDINAIKTYLKLSPESKPYLSCKEQIILLKDRGLIVDDEKFALMQLETISYYSLINAYSHFFKQKNNEFFVNGTHFRDLFHCYQNDMRLKNLYFKYLILIEQSLKNNVAAVVAKNFGVNEPKTKSKNNPKHFDRKYSYLDTYYYDPHKSKRAGVLDDISKSLNWNKVESINHYKKKHNHVPPWIIILPHNFGLTIKWLSILKKSHKIEVLKSISNITVNEKDLSSIGVDSLNLLREFRNRIAHGHRFYSFKSEYQLSLAHFNNIIGYELLKKDYSKDIGRNDLYALTLIILLFTRNKPTRDNLIEELFKLYGEMDQYNKINLLESIGFTYNLIRKLSFFNENYL
1897470..1897482                   attR                                                                                 N/A                 ATTTTTTACTTTT
1897498..1898880                   PHAGE_Staphy_phiMR11_NC_010147: integrase; FO458_09380; phage(gi162290108)           0.0                 StaphylococcuslugdunensisMKVAIYTRVSTLEQREKGHSIDEQERKLRSFCDINDWTVKDVYVDAGFSGAKRDRPELTRLLDDISEFDLVLVYKLDRLTRSVRDLLDLLEVFENNNVAFRSATEVYDTTTAIGRLFVTLVGAMAEWERETIRERSLMGKRAAIKKGMILTAPPFYYDRVNNTYIPNQYKDVVLDVYNKVKKGYSIAHIARLYNNSDVKPPNGNEEWTTRMLMHALRNPVTRGHYQWGEIYIEDSHEPIITDEMYNTIIDRLDKHTNTKVVAHTSVFRGKLICPNCGYALTLNSQKRKRKNDTIVYKTYYCNNCKITKGMKPHHITETETLRVFKDHLSKIDLKQYETQEKEKQSHVTIDLSKVMEQRKRYHKLYASGMMQENELFELIKETDEMIEEYEKQRKQVDVKEFDICKIKEIKDVLLKSWDIFTLEDKADFIQMSIKAINIEYTKLKRGKSSNSMKIKDIEFY
