gi|00000000|ref|CP041727.1|  Staphylococcus lugdunensis strain SL122 chromosome, complete 2647211, gc%: 33.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
18210..18221                       attL                                                                                 N/A                 CAAGAGCAACAA
complement(18521..19903)           PHAGE_Staphy_StB27_NC_019914: integrase; FO459_00070; phage(gi431809677)             5.75e-123           StaphylococcuslugdunensisMKVAIYTRVSSAEQANEGYSIHEQKKKLISYCEIHDWNEYKVFTDAGISGGSMKRPALQNLMKQLSYFDLVLVYKLDRLTRNVRDLLDMLEEFEQYNVSFKSATEVFDTTSAIGKLFITMVGAMAEWERETIRERSLFGSRAAVREGNYIREAPFCYDNIEGKLHPNEHAKVIDLIVSMFKKGISANEIARRLNSSKVYVPKKKSWNRNSLIRLMRSPVLRGHTKYGDMLIENTHEPVLSKHDYNAINDAISSKTHKSKVKHHAIFRGALVCPQCNRRLHLYAGTVKDRKGYKYDVRRYKCETCSKNKDVKNVSFNESEVENKFINLLKSYELNKFHIRKVEPVKKIEYDIDKINKQKINYTRSWSLGYIEDDEYFELMEEINATKKMIEEQTTENKQSVSKEQIQSINNFILKGWEELTIKDKEELILSTVDKIEFNFIPKDKKHKTNTLDINNIHFKF
complement(19960..20883)           PHAGE_Staphy_StB27_NC_019914: hypothetical protein; FO459_00075; phage(gi431809679)     1.87e-175           StaphylococcuslugdunensisMKKVLFILLSCFLVLGACGNNDKNTEKVSEDKPQFKNDTLVLDQAVLKIDDTFILNDKDSGDKLLAFKYHVKNKSDSEDITSMNVWIACFEATQDSDNTVNKLDVGITPTTGKLGEWNEHSNDTIKKGKTTKGIMTYKLQNDEDVVLKATKGADGKKLGTKKIKLDDLKSEDYSVTEDLTDNSKKDNKSEDNDSKNVASAKSDDNTSKESKTEDGKTTSDSNNNSLSTTNDQQVNNQPSNAQETPPTTHDESQMGYGRGDYEQARKDSEKVWNDPNAHVGGPRWVGKNEGYESWAKRQQEVQNTPAE
complement(20939..21550)           PHAGE_Staphy_phi2958PVL_NC_011344: probable transcriptional repressor; FO459_00080; phage(gi209363558)     3.85e-131           StaphylococcuslugdunensisMKPDIKSRRKELNLTLEQVGDLVGVGKSTVRKWETGDIENMKRDKIVKLAKALRVSPSYIMGIEEEQPQLETLPVKKIPVVSKISAGLPIYSEENLIDYIYFATNKLNSDKEEFGLKVSGDSMDKIFQDGDIVVVEKDSVVENGQLGVIMINGYNATVKRIRYNGNQIILIPESNNQEHLPQVYGKDDEIKIIGRVVASQKLF
21722..21949                       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; FO459_00085; phage(gi209363559)     3.64e-45            StaphylococcuslugdunensisMNKAKLYSALAMKEMHVNDFLKELNEHGLKLSKSAYYSRIRGEQEFDIKEIKTIVKVLNLTRDQMNDIFFEELVS
21977..22930                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00090; phage(gi939535483)     1.51e-64            StaphylococcuslugdunensisMKEIESIEISKLKFDEDINQLVPEMTEEEFSDLVKSIEEEGQRTPIHINKDNTILDGRHRVRALEELNIKEVSAIKENMSKSEALKFVRDTAVKRRSLNANQKLNIVLNTKDLIDDLQERAKTNQGTRNDLTFSSAEPKVKKTPVHENKEIADLAGVSTSTVMRAKKVKREDPEAYEKVIKENAGWDRAYNNLESIKKKKETKQNEVAKVETPVKEPEAPNTKNKENSKTEPDKPMDIREKINADTQSVEPEIRKAIKHETSANAFVSALEEIISIHDDEIEDFELFERYLSTLNYKALLQAKEKIENIIKIGGYER
22927..23694                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00095; phage(gi939535485)     2.51e-18            StaphylococcuslugdunensisMKLRNLNVMGLMTDMSYQSPVKENQVKRILKNFDKDSLDAITVNLRPNGFYYIIDGQHRVEVLKRLKISTVPAKIHVGLTLEEEAKLYRNINTRPTKSPNSIAKADITQGDENAELINFSVLQAGMKIDYDNQNPKYGYISAYKALERIFLKYGSAGLVETLKFIKGTFGDEKRFFQGYVMEGLAKFLSTYYSDLKINELSKRLKKTGFDDFMTEVNKQSPSFSSKKECLPFVVADIYNKRRNENNKLKKLYLRD
23763..24074                       PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO459_00100; phage(gi122891724)     2.91e-52            StaphylococcuslugdunensisMNKLYKTPLLITMAVVTWKVWRIGNSKPTLGEVYRRHKPELPTVTLNKNGLFINDFRVPYVLEEGVNVKKSMNNLYTVSLVFFAKRIIADNYEADNPENQQLF
complement(24022..24405)           PHAGE_Strept_315.2_NC_004585: hypothetical protein; FO459_00105; phage(gi28876256)     4.95e-13            StaphylococcuslugdunensisMDYFNLYKVILEACDNPSVTDGQELIDIISTHPYILELREKYEDDLIISKIIQILENGIDDNVIKGDYVINMDNNFHRISGLTTSGHLYLKTLSNNSSFSKFKNFAKNTSSKITVDSLGYLLRNYLQ
24463..25215                       PHAGE_Staphy_187_NC_007047: ORF017; FO459_00110; phage(gi66395232)                   0.0                 StaphylococcuslugdunensisMQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTAYKDWFPRMLKYGFEENIDYTAIAQKRATAQGNMTHYIDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFKWLRQNGFLIKRQGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFVNKFLGEKQTS
25231..25374                       PHAGE_Staphy_88_NC_007063: ORF124; FO459_00115; phage(gi66396403)                    1.19e-18            StaphylococcuslugdunensisMLQKFRIAKEKNKLKLKLLKHASYCLETSNNPELLRAVAELLKKINR
complement(25384..25986)           PHAGE_Staphy_Ipla88_NC_011614: hypothetical protein; FO459_00120; phage(gi215401176)     8.26e-133           StaphylococcuslugdunensisMDNINLTQRQLDLIRKNQAILSKLPIETYAKVVNTMNDLRINQSKLSNWASYMHQVTKNHPMFKSNLFSEKILDEFISSNSFPEDEVRKVSTHLRKSFVDTVDVPVLGKTVDSAHPIDDVDTEKYNSVFNESLNHIFISPSAKFVKKVSVGSAIGVIPPIMVRTILDQYVNYFMLFNVIATLLTLYVIGNHLDDENSNDD
26214..26393                       hypothetical protein; FO459_00125                                                    N/A                 StaphylococcuslugdunensisMRSLTIALITFILISIITMVIFEIYFTTGLVVSAAIAIVAYWFYEHHFFDKKTATCANK
26462..26947                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00130; phage(gi939535491)     9.21e-88            StaphylococcuslugdunensisMSNLFELSTNYQQIYNLISEQENELILKDTLASINDALENKADSYVAIIKSLEADNKVIDEEIKRLRQRKSTNENGIKRLKESLQQAMEETGKEKFKTSLNSYSIAKNPPTLYVQEENSIPKEYYIEQEPKLNKTELLKAVKDGLEIKGVELKQNRSLRVR
26948..27622                       PHAGE_Staphy_StB12_NC_020490: ERF-like recombinase; FO459_00135; phage(gi939535492)     4.31e-119           StaphylococcuslugdunensisMTEKLNLYQKIADVKANIDGFTKDTKGYNYSYVSGSQVLHRIRNKMIEHNLLLVPKTSEENYKQIEVTRFNKKASREVTTSEFVVEMKLTYLWINADKPEEQLEVSFYSVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKQKQEKYNKASSNTIGVLKQEVYQFVALMKSLGKEVTQQQAEKTFGIQEYASMTEQQAANTINKIQTMAKKYKENEQ
27619..28056                       PHAGE_Staphy_phi5967PVL_NC_019921: ssDNA-binding protein; FO459_00140; phage(gi431810257)     1.79e-65            StaphylococcuslugdunensisMNTVNLLGNLVADPELRGQNSNVANFRIAVQRPFKNKQTNEYETDFITCVAFGKTAEIITNNFKKGNKIGVTGSIQTGSYEKDGQRVYTTDVAVNQVTFVERKNNNAQSNNQQQNGQAQSDNNPFSNGMQNANGPIDISDEDLPF
28134..28940                       PHAGE_Staphy_StB12_NC_020490: replication initiation protein; FO459_00145; phage(gi939535496)     6.82e-137           StaphylococcuslugdunensisMAEVSWIKLKVGMFDDSKIKYIEALPERDTIITLWVKLLTLAGKYNEQGYIMLSENLPYNEEMLANEFNRPINSIRLALQTFKTLGMIEDVNGVFKVTNWEKHQSLDSKSKHNEKNRLRQQRYRERQKQNQLENNVTVTLRNDTEEEEEKEEEYKNKNKEDRSNDVFKNSINYIMNNLDKNLTPNQMQQISYAIDDIGKHADEVVEVATDYTKDKGCHAGYLIKVLNNWAKENVKTKEDAENKIKPKNKKSAADDLIAQMEKELGDES
28940..29299                       PHAGE_Staphy_CNPx_NC_031241: hypothetical protein; FO459_00150; phage(gi100050)      1.15e-68            StaphylococcuslugdunensisMPMTKQQALDVIKTIRQVYNLDFDRSKLETWVNILSENGDYEPTVKAVMQYINDLKPYPPSIPNIMRKKIKVVKEEPIDEKTAKHRWRMKNDPEYRAKRKKVLDDFKKKLREFEVESDE
29292..30527                       PHAGE_Staphy_Ipla7_NC_018284: DNA helicase; FO459_00155; phage(gi399529161)          0.0                 StaphylococcuslugdunensisMNERYEIESTIIASLLKKPELLEKLRVKSEMFKNEKLRGFIDYVLEIGKVDHNEIYLKTTKDKDFLDFQTIQYLYNSDFIGYGLFERYQQDLLNLYQIDKTQEVLSEFNTNPNIYNFEEMLNKLQKVSLISATDESGTKQIVDNFIEELYSEEPKQQIHTGYKLMDYKIGGLEPTQLVVIAARPSVGKTGFALNMMLNIASQGYKTSFFSLETTGVSVLKRMLSAETGIELTRIKEIKDLEPDELTRLTDAADKFIKLDIDIHDKSNITVHDVRKQALKSKEAQQVIFIDYLQLMQTDSKLDRRNGIEKISRDLKVIANETGAIIILLSQLSRGVESRNDKRPMLSDMKEAGGIEADASLAMLLYRDDYYNHDEVDISGKSIVECNIAKNKDGETGIVEFEYYKKTQRFFT
30524..30751                       PHAGE_Staphy_CNPx_NC_031241: recombination endonuclease subunit; FO459_00160; phage(gi100052)     2.31e-11            StaphylococcuslugdunensisMTIIELQKRLGELYRNDCKNLEPARSDILEMGFAIKRLLEKRELSPFDNDKKSMDKIFNEMNWNKLIKEVDKYGD
30741..30980                       PHAGE_Staphy_phiRS7_NC_022914: phi-ETA orf24 like protein; FO459_00165; phage(gi560186002)     2.45e-12            StaphylococcuslugdunensisMGIKEGAKKQYKLFDGSGDVAFVVYPLAENSNCLISRSGWRYTSKTAFNLSDKELLAYKEKHNLFYDYELNMQMSIFDI
30990..31397                       PHAGE_Staphy_StB20_like_NC_028821: endodeoxyribonuclease RusA; FO459_00170; phage(gi971746501)     1.14e-72            StaphylococcuslugdunensisMQLEIKFNDVFEAPIGSPRPRFRKSGKFVQTYMPAAYTKHKEYIKEQMPKLMIESKLKVSLLFCFEPPKSWSKKKKTTAIGQYKHTKPDIDNLIKTVLDAANSHLWKDDNQIVEIHSFKKFAEQAKVIMSLEEVE
31394..31708                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00175; phage(gi939535504)     2.50e-16            StaphylococcuslugdunensisMKALDLIEELQDAMEHYGDFDVKTERNEDIELKHIYSFQPEATAVINVKGRMPMVNLNGKRYRLCDVYKYFDVADSTVRKRYKQGLRGAELIYGKGHYFFEGDN
31711..31962                       hypothetical protein; FO459_00180                                                    N/A                 StaphylococcuslugdunensisMVQIYERNEGSLSSRQLYLIQQAERRHERMLMLKRKEQREEKERRSKELVKQHKVKSEWFDHLCKNNLLAKLKTDCYGRDQRG
31969..32391                       PHAGE_Staphy_CNPH82_NC_008722: hypothetical protein; FO459_00185; phage(gi119953732)     1.33e-34            StaphylococcuslugdunensisMTSIKELNIGDYIMFRRDNDNNSYPGEVLLKGHMTGQDTFKTFARVKVGNLTEPVMITDDDDFTVVEKTEDNVNSPSHYNYGDIEVIDYIEQVTAHYPSNLAYDIGNAIKYLSRATHKNGKEDIAKARWYVQRVFEKWGS
32395..32526                       PHAGE_Staphy_tp310_2_NC_009762: hypothetical protein; FO459_00190; phage(gi156603979)     1.11e-13            StaphylococcuslugdunensisMVKIKREQIEQAIISASAFTGNDTEELLQEVDKVYKKAKGFDEM
32547..33074                       PHAGE_Staphy_TEM123_NC_017968: dUTPase; FO459_00195; phage(gi388570353)              5.87e-103           StaphylococcuslugdunensisMTNQLTVDQLEELLQIQKDFDSRIPTLNLQDSRIAYVVFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSIANQCADIEDILDYIEDGDFTDYIDDVEIDFNNNDVVDEFMSDINELYNGWYGANLFLPFAIAIKYYSIDQLIDAYKKKMERNHARQDGTADKDKGYV
33114..33266                       PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; FO459_00200; phage(gi509140972)     2.15e-06            StaphylococcuslugdunensisMTQFLITEIKHGQETFVDVTKPHDNETYTLVEAESAEDARRKYEEGNNGQ
33566..33982                       PHAGE_Staphy_Ipla7_NC_018284: RinA; FO459_00205; phage(gi399529178)                  4.29e-82            StaphylococcuslugdunensisMIVIQKHDIKKLEDYIKNIEEYRKEFLMRGYELMENHEPENVGAGKSNLPGNPIERETVKKLSDNRYVMLRNVVKGVDKLIFEADEDTKDLIRLRYWECPIGCYEWEDIANYFGISKTSVLRRRDAMISRLAEFIGYV
34284..34712                       PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; FO459_00210; phage(gi13487829)     5.02e-31            StaphylococcuslugdunensisMGRRTLYEKLDIKDKLDLVEGWKRDGLTDEQIARNFGVNFKTVMKWKEDHSEFMEAIKKGKEVSDYELENALHKRATGYYYEEETVTNAGKVVKVKKYEHANPTSLIFALKNRLPHKYRDKVEQEITNRNFEIKIGDYDDES
34699..35979                       PHAGE_Staphy_11_NC_004615: large terminase; FO459_00215; phage(gi29028593)           0.0                 StaphylococcuslugdunensisMTKVKLRFDNPAKVFNRNIFDVLFNYDNFTEVHYGGGSSGKSHGVIQKVVLKALKDWKYPRRILWLRKVQSTIKDSLFEDVKDCLINFGVWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHINKQIFLMFNPVSKLNWVYKYFFEHDKPMENVMIRQSSYRDNKFLDEMTRQNLELLASRNPAYYKIYALGEFATLDKLVFPKYEKRLLNKDELRHLPSYFGLDFGYVNDPSAFVHVKIDKKNRKLYIVEEYVKTGMLNDEIARVIKQLGYGKEEITADSAEQKSIAEMRKLGVERIKPTKKGKGSIAQGLQFLMQFDIVIDERCFKTIEEFDNYTWKKDKNTEEYLNEPVDTYNHCIDSLRYSVERFYRPESKKKSPLKKSINTIKAMGL
35991..37139                       PHAGE_Staphy_StB12_NC_020490: portal protein SPP1 family; FO459_00220; phage(gi939535523)     0.0                 StaphylococcuslugdunensisMAHVNNFERDLERRQLRDEIYRRDAVEVYKYDGQATDLLDNLDDISNFIRHHLEAQVPRLQMLDDYYQGLNFNIMRNRRRREKHLADNRAAHDFASYITDFVNGYCFGHAIQVQSDKEMTQDKINELHQLNDIDSHNRSLGLDLSIFGRAYEYIIRNQEDEVRLYKSDPRSTFVIYDTSIEQNSLMAVRYWQVDQEDNINSDDNSNYIYYVDVITDDATYFYTSHSVTNYELRERKPPEAHSFGKVTITEFSNNEKRRGDFEKVIPLIDLYDEAESDTANYMSDLNDAMLLIKGNVDLDERVAVLQKEANVFHLTPPEYTTVDDKVTEGNVDAEYIYKQYDVSGVESYKTRIAKDIHTLTNTPDMTDENFSGNQSGKTLPLKL
37243..37872                       PHAGE_Bacill_TsarBomba_NC_028890: hypothetical protein; FO459_00225; phage(gi971753065)     1.56e-37            StaphylococcuslugdunensisMKYNRLTILKTYSKKMNNGKSKRFAWCKCDCGNEKEIALYHVKKGNTKSCGCLSREKTTERNTRHGMRHHPIYNTYNGMMARCYNNKKKSYKHYGGRGIKVCDEWHDINNFIKWCEKNGFEKDKQLDRIDNNKNYSPDNCRFVTPTINLRNTRRNVMINGLALREYLDMLGKKYDLSFPTLRYRYYTITKEGLEPSEDNLIFHSRWLKR
38102..38503                       PHAGE_Staphy_StB12_NC_020490: portal protein SPP1 family; FO459_00230; phage(gi939535523)     1.87e-50            StaphylococcuslugdunensisEAMKYKLFGLEQRTSIKEGLFRKGLVRRYKLVGEIMSINREIDKDNLRDLIFTFTRNLPKSLTEEMQMYINSGGEISQKTLMSLVSFIDNPQDEVKRIQSEEEEKVKRSDDLMYKNVQNEENNIEQSTSNIEE
38510..39460                       PHAGE_Staphy_StB27_NC_019914: minor head protein; FO459_00235; phage(gi431809708)     4.05e-100           StaphylococcuslugdunensisMTYWDKRAQEIIKDETMSDKEMSQEIERIVNNMIDDIENEISKFYARYADSEGIPINEAKKRVDNFDVQSFANKARSYVKNNDFSDRANRELKQYNTAMYVNREKLLKAQLGLIVTYSYARIEQSIYNYMESSYYRSLEQQAGILGETIHVSLNDVKTIVTAPFQNSNWSRRLWRDMKVVRAHVEKATSQVLLRGRHPYEFVKEFRKETGNSTYEIRRLLITETARVQTLAAKRHMLEQHGPEAEYEYHAKIDGKTTKTCRSLNGKVFKVKDMKPGVNAPPMHPFCRSAVAPHVDPNWREEFFEERKGRYFGGVVK
39992..40597                       PHAGE_Staphy_StB12_NC_020490: scaffold protein; FO459_00240; phage(gi939535527)      1.26e-34            StaphylococcuslugdunensisMKLNDKLNLNLQFFADNDEGEPGQSNDKKPENNSDQEQETYTRSEVDSQISKAVETALSKRDRKHQQELDKAREEAKKEAESYAKLTEKEKKDKEIEKREQALAEKEKEFKLRELKADVESDLKEKGLPTSFAQSLIHLEDNEQINDVVNSIKEDFDKAVQEQVKEATRQSTPSSQRSNLTNAKQTHTNFADLAKENRIIK
40615..41535                       PHAGE_Staphy_Ipla88_NC_011614: major head protein; FO459_00245; phage(gi215401212)     6.41e-141           StaphylococcuslugdunensisMADVKPQTFNPDHVMMHEHKEGELLNDFNEPILLDVLQNSKIMQLGQYQDMAGKSEKKFTFWADKPGAYWVGEGQKIKTSKPSLVEAKMRSHKLGVIIVASREFLNYTYSRFFEAMKPQIAEQFYKKFDEAGLLNYDNPFGKSVAQSVATSGNVVKGDINLDNVLALEDVLLEHNVEPNAFLSKTQNRTALRGVEDKVTKEKYYDRTSNTLDSLPVVDLKSEQFKKGELFAGDFNKMFYGIPYNMSYQISEDGQLSTVQNADGSPVNLFEQELIALRVTMDVAFHIADDNAFAKLEAAKDAKPETV
41557..41826                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00250; phage(gi939535529)     3.83e-34            StaphylococcuslugdunensisMAFAYKVIRSFVDKHDNKKYEVGDEFSADISKKRINELFHKQNKFKEQYIALDVDSKSTKAELLDVAKTHGIEVSEHDTKADIVKSLEG
41828..42157                       PHAGE_Staphy_StB12_NC_020490: DNA packaging minor head protein; FO459_00255; phage(gi939535530)     1.24e-55            StaphylococcuslugdunensisMATLENVKLLLSIDDDKQDSLLNIIINNTEKRLISLLPLDVEEIPVRLEYIVEEVAVKRFNRVGAEGMTNESIDGRSNTFQDNDFDEYMDVIDALFPKNLNKRGKGIFY
42154..42456                       PHAGE_Staphy_StB12_NC_020490: minor head protein; FO459_00260; phage(gi939535531)     4.75e-49            StaphylococcuslugdunensisMRYNKRIAFAKESKGKYNPKISQYETTEDVYDEIPCNISPLSPDLTSLEYGDVKKDINIIRLNGRFEPRVTHAYIKGIKYLVTKKISYEHDTVFYVEEVK
42458..42817                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00265; phage(gi939535532)     2.42e-47            StaphylococcuslugdunensisMSNDIDALIEKFSQMQESIDNDVDEVLRNDAIEFANDTVASAKGVMNKGYWTGNLARMIRDTKEGNLQYAVTSKAGYSSFLEYGTRYMEPETFMFPVYERYTKQVREDLERLINGYGGV
42817..43206                       PHAGE_Staphy_StB12_NC_020490: head structural protein; FO459_00270; phage(gi939535533)     2.23e-54            StaphylococcuslugdunensisMKQSAKLQLFNYLYERFTELDVPVIETKDLNQELSYPFIAIQTVSDKVNRSTFDSYVGNPTATVHLWGVDEDKGANDNLYMNVQDIVLDDIDLVGYSLRNPQITVNVSTEIESNQVLEHTTINIEYASH
43254..43808                       PHAGE_Staphy_StB12_NC_020490: major tail protein; FO459_00275; phage(gi939535534)     2.84e-104           StaphylococcuslugdunensisMALKQGTDELALIRKAGDKKDANKVLWVTEIERETEKDRDTEATIDGPVNSGGTLESTVTINCYMNVDDTLCDEIEDAAEEDVPYELWIINKKVKNKEGKYKAEYRQGLWNSIDRTNEADGIAEFETEFGVYLKKVRGWATLPDEIEKNKAAYGFHDTVAADPANDGLVSEMPQPNQPSTVETV
43869..44228                       PHAGE_Staphy_StB12_NC_020490: tail assembly protein; FO459_00280; phage(gi939535535)     1.11e-56            StaphylococcuslugdunensisMQIKFNGKELELSFGFKFLSLVDKSLGFEAEQMNIGQGLNMIVPNLSNGNVVALGEVIKAATSHHKKHPKSDEDIEAVLEDIAENTGIQEYCDEILEELGKKRLTQNLIPDEYKENKKK
44273..44617                       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_00285; phage(gi939535536)     4.06e-53            StaphylococcuslugdunensisMSKLKIYDLDQIEMMTLREFNYRMYALEYEQLDRDMEMYKWAFAIRDAQAEQKRKGGKKGEMEYRFKSADDIMNYDENVKRLNRGEPLKFGSEAKFEQNKPPKDLLAEIAKLNK
44632..48165                       PHAGE_Staphy_StB12_NC_020490: tail tape measure protein; FO459_00290; phage(gi939535537)     0.0                 StaphylococcuslugdunensisMSEANYSIKASIEANTKKFKSALDAAKRTAEKFKGTMDKIKNNKIDADASGVKTAVENAKASLESFDNTKADAELDVDIDEVKSKVAFAKEYVEKFNSYRGDAKLDADVSKALSNIKKVEAYIEKFDDSSADASLDVDARKAITHLSELQLNLDEFDGNSYSASLDADATRARTAIAEAKKMLNSFARQRAKATLEVDEGAAIAKVTTFKAMLRSIPNRIHTRIDVDSDKAQGFLRSLATGIDSSMNSWNALAQRIRTVGTVISNMLQGALLSNITLLVPAIASLVPAFMAVLNAVGVLSGGILGLAGAFSVAGMGAVAMAGMGISAIKMLNDGLIQSSKATEAYKKSLQGLKDEWTQIIKMNADSIFGAMSSAMNGVTTALKSLTPFLSGVADLVDYNAQKFEKWVKTSDTAKKAFQALNTVGVQIFGDLLNAAGRFGDGLVNIFTQFMPLFKFMSQGLQNMSVAFQKWANSVAVQNGIKSFIEYTKQNLPLIGQIFGSTFKGIFNLMKAFAPNTHLILQSLAQMAQQFEQWSATVAKSDGFKKFIAYVQENGPKLLQLLGNLVMIIINVATAMAPLAAAVLDVAIAITDFIAKLTEAHPAIGMLLGLIATLAGVFMTLGPPILGVIDFIGTFVKALTGAGTVIEALSAIGSALSGALDTVALAFMYLDAPIIAVVAAVAAVIAIFVALWNSSSVLRNALIGAWNAIKSAVGAAIQAVIGFLGDLLSQAQSIMAPLVPMFQRIWNAIVKIVEVAVKFLSPIVSQGFQTLVAVISTVWAVISTIIKVAFDVIIGIITVALQLLTGDWSGAWQTILKVGSTIWQNIVSMAQNIWNTWSKYLQQTWQNVVNFFADIFAPLVSTASTIWSMIVAVVITAVNRLVAFIQTCWNTIVTVTQTVWAVLVTIAQTIWTTIVTVITTIVQSIVSFVSSGWSMLMSVTSSIMGGISSVVSSIWSAISSFVSSVVSSVVSFVTSGWNNMLSAISSAMHGIVSAVMSGMSNVISSVRNGVNNAVSAARSFIGQMVSVGRDLIMGLINGIKAMASQVAATAKNVVMGAVNAAKNALHIGSPSKLFKQYGVWTMEGLGIGINQEGKNVVSGMGAMAKSVANAFDANLAIPDINSQIKNANASVNSQVTHTHQFKTNPSQRVVRVEMAVDNDALTSIVNGQTADRDATFTF
48177..49136                       PHAGE_Staphy_StB12_NC_020490: minor tail protein; FO459_00295; phage(gi939535538)     1.19e-158           StaphylococcuslugdunensisMDIEIKKKDGTKYKLSDFGFRVKDVVIESMEIEDNYETKENTSGRMLLSSQYRKRKITVPCYVYSTKLNDIPRLRDEFYNLTVDTEVVWLRELRKRKPKNYRFIEPTEEDFQEYDEYDNPIYDHDEFGDDYYVSGKQYQVKCSAPIVPEQKGRYIHFELEFETEEIPFAESIGTSLDLENRPDKELWSNDMLIPFDEMDYTRMFTFTNVYNNSVYYHGNVPNDEFKLYKKVTLVLGENIKAKEKFYFTCGVLSDVMTIKGIDLKKGDVIVYDGVQTFRNGVPINNEASNAQPKFKPGWNDFRFSHLVKTAKFDMKFYYK
49147..50382                       PHAGE_Staphy_StB12_NC_020490: endopeptidase; FO459_00300; phage(gi939535539)         2.16e-164           StaphylococcuslugdunensisMPVLFTPHRGRGIPVYVTTTTTEKLGSETIVKCRILEDKYNYQVIRGVRKRWTLTQLKGPNDHREYVAFIIDRQTHGRLQEVSISLREKPIDIINRHVVHNKISGPYQAQDFLDVIFKGTGLSYEVPSDLYFADVKDCGEGETVKDLVKKAMDIWDLEFEIKFSSKTKKYTFVFTSYLEKRADYHIDDEINANNMKYEEDSGELYTYAVGYGDYTDDEGLEGAGLIEYFEHPEMKDIGKYEAPPIKDGTIKDPDIMKAKLQTLIYESIKISLTLDFITLRKYYPNAIPKIGDVVKVKHSILGINQFMRIVEVTTVRDADNKIVKQDVTLGDFNRHARYLKRLSEAAQVIGGLGGGSFASNYRKTESKANSAATRGGKGSKPVEIKGEDGKTYDLSEITVDKDGNLKVKEVN
50383..52257                       PHAGE_Staphy_StB12_NC_020490: Zn carboxypeptidase; FO459_00305; phage(gi939535540)     0.0                 StaphylococcuslugdunensisMRKTIYEELDTIFGARFVRECELNFIATREMLINVEEILQRHNYIDKKAHQSYQIEHTHSDGSKQDLEGTLRWFDARLRATLVPTLANDQQEILDARASIDGQNFDTLGDRLGHDFLNLSNLVGEELNVADDNSYIWNPPYIKGAMRGENEAPLHNEPVENLKIFWDKFVDNKYCRKSFIGKDESNQYDIYKYTFEPQHYSKTIVITSCIHGNEYSAFYALSRFMDLVVNHWQEHAPLANIRKNVRLIVVPIVNPWGFANQERENSNNVDLNRNFDYYWENGTGTNPSKANFKGKKPFSEKEAKNMKALFEGLGDIAGHIDCHNITSQISDYCLFYPRFSNQPNNVMTQLLQDMSNYGDYVTWGSSTLASFSNWVGIKHNITSFLPEVYEGRAGKPRGAEEMWRSVYFLGNIVIRLAQANVSKNGRTANEPIAKSFVYSDRYNTKGATQFSLKSTTSWQRMLMTQQRFKVTANGFATMHGSITVEVDRDTTFGVNPMVIQNYNPFSGNGKSDKRQLFKVEHTLKKGVHTIPIHAIAPIQMSTTSPENVHRTDEVMPVVEVRRSKGVCHIKNLIIVTEFTPSHSHNSVQMFRSGTYGNQKENTFDQIYPDKPASFDIRNKIRNKK
52271..53428                       PHAGE_Staphy_StB12_NC_020490: tail protein; FO459_00310; phage(gi939535541)          3.14e-93            StaphylococcuslugdunensisMSDFSKDGIYKEAKLIALDEPRLVPITNEQLVFYNLDINTAMLTFQLKKGIYPLQISKTNADIHVFFESTNGSQTDKVNVEFVDSLNGVIRFVVDNEFLNAATDTWVTGQIYLTAVGRADTVVLNEFQFYVKDALINKIGADIKIKTIRQIDQLVMDVRKKVDNEMKSLTKLKDIRIEFDAFVIKSKNDLNKTINDTKSDINNLKDTAEKSINSQIERIRNESDEVIKKINAGDVVDHFDLDNALATYVKSSDFKTELDKKANTSDITEPSALEKMISDKIDERLAKVATPHVFTDENGYIPRIENPDLDSMSGIDKSGFFYAYAPVNSPDTENDNGYLVVIARSASYKKVLFMPFNKHTIYSRNKLGTTTGWGKWKNVTSQYSN
53444..53866                       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; FO459_00315; phage(gi971766705)     1.56e-62            StaphylococcuslugdunensisMKKSSIIYLLVVVFIFGIGLLEFERGFFWAKEQSDVLNDSEFYLALHQIMPIWIWGVLGMIFSILFIIAPFFLPSQRFNNVFNYLICISGFGNAAFYFLMTSASVFHAINWLTPLQFATLTMINAIAGFFGGADIVGKRR
53847..54245                       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; FO459_00320; phage(gi971766706)     2.12e-42            StaphylococcuslugdunensisMLEKDDRYVTRSEWIDGTGKIYERINSNDRKHSEAISELKNTVEKQTVYQKMQFESQERQEKHLSKISDSMNAFSNEFTDIKYKVRTHTDQLDNINKSIMEKQKGNVQITGIIIGGIFSIIVAAIGLAQYLF
54721..56430                       PHAGE_Staphy_StB12_NC_020490: peptidoglycan hydrolase; FO459_00325; phage(gi939535545)     0.0                 StaphylococcuslugdunensisMANRSNYPNSSWKIYRNTSSFVPQPGDIVCWTYGYAGHTGIVVGPSDKKHFRTVDQNWFNSNQYVGSRAAYVNHTYNGFGGNLYFIRPPYKASNTSAPAKNQNKTVTKKKRRTDIHFTIDDKETVYPEMIPHRIVEGVERGHSPKSVTVRNSGTMCSVQDMYFDRKKYIQDQEYPHYYIDRNHIWQPRLEKYEVPSDPQSLVIEVCGDYSESKNDFILNELHAMLFVSQRMQFHDIPLKKSSINVKGSIWRSIYEHGDWNMAVKGKPSKKSIDKTIEALLYIYKNSKTLLSEIPTDKITTRTIRVSVPGSSVKGSTTTKPSTSTSHNSSHRTKTTKKSTNRKENTVIVVHSKYTFNHAVNIQMTRSPQINYGVGWYNANRSQTLNAMNSLKIWNSSTQKYQMLNLGKYQGISVTALNKILKGKGSLSGQGKAVAYACKKYNLNEIYLISHAFLESGYGRSYFASGRAGIYNYFGIGAYDNNPNNAISYAKRHGWTTPAKGIVGGAKFVRSGYINQGQNTLYRMRWNPQHPGNHQYATDVRWAQVQATTIKSLYEQIGIKGEYFIRDKYK
56484..59255                       PHAGE_Staphy_StB12_NC_020490: tail protein; FO459_00330; phage(gi939535546)          1.16e-78            StaphylococcuslugdunensisMELYKGGKVEAIINEQGVDLGYINLNLYTMDNSTSVIDIHLKMKNVLSEDPKYFPVNLNQTAFKPILHLFAQDGSIFTNETVEVVKPEEGHIRYYIPDYVTRHVGQVQAKLFLEDTTGTDDSSHVADFYFNVSDSGITRAIGKEVHVDTLNGIVEKILKSNVDLFKGEKGDKGDKGEDGKDGRDGKDGVDGINGSTGPQGPPGENGNDGKPFKYEDLTIEQMNEIKGEKGEKGDKGDKGDKGDKGDKGEKGDPGKDGNVSFDSLTDAQKKDLAAFSDIEDKAVSYPRTDFLFSGKNIFNAYTIASDIILNYADGQEIKNETYVTSDFLPIEPNTNYTQNYADVVVFYDINKKFLSGLSRSATPSQARTFKTPSNAFFLRTTTIKDPKYAGYNYLNYQIEKGSTKTSFEKFNYSLPGLNQNIPSRYITNDMLYDYSIAADKLSFTKRSDNLFDSSRVMVGKYVNQTNGFLSDNINYSASDYIYIKDATTLSKNNNFATYAFYNKNFDFISVTPTATTQITVPQDAWYVRFSMLTSAIKTTMLVKGDKLPDTYTPYDIKIPSKYIEKDTTQDNNNYNVDSFGKHTLKTYTADISKQLNADYAGKTEIAFIGDSWVQGGEFRGGDRLTLPLKEKFMKLGYADGGIGFIGLANNHTGNGLLSVELKGSWTQYDANLDIGPKAKGLDTAMVESSTAGDSIVVTFYEEIDYYELHTSNIGKWRYKVDNGEWTTVDATQQEVTPIKLDLGKHTITLEVVEGLVSFIGSYAYKDNKGVVIHKMGNGGLKSSQIAATDRDNWVKQIKRCNANTFGILLGTNDMAASMTIADFEKNMKEIVSRIKEGKPLASVFLISPSGNNVQNTALGMSEYSNALHRVAKELDIGFISLYRALGDFNTTNSNGLMYKDGVHPNKNGGYAISNVVYDRLLRI
59312..59584                       PHAGE_Staphy_CNPH82_NC_008722: putative phage holin; FO459_00335; phage(gi119953707)     6.90e-48            StaphylococcuslugdunensisMKTDIGSIVRTIVFILAWVNQFLATKHISPIPVDEVTISSIITGVISIYTWWKNNNFTHAAQKGQQKIHEVKSGVETTTGGAPQMNGDEF
59584..60993                       PHAGE_Staphy_B236_NC_028915: amidase; FO459_00340; phage(gi971755352)                0.0                 StaphylococcuslugdunensisMVSVRTYNQAIAYVKKMEGNAYDPDRSYGAQCFDLANQYWLYLFGHTLKGVGAADIPTWNNFTNEATVYENTQTFQAKPGDVVIFNRNYGGGYGHVAIVLSATLNTINVIEQNWLGGAQWSPPEVATRRAHGYDFPMYFIRPFYAKETTKNKVKSKVTPVKKATTKKGKKILLVAGHGKGAYSNDPGAVANGYNERDFNRKEIIPRIKKYLESVGNTVVLYGGKSMNQDLYQDTLYGQRVGNYSDYGLYWVKNNVKPDAIIEFHLDAAGPTASGGHVIISDRYPADDIDKALSSALGKTVGKIRGVTPRNDLLNANVTGQLNLNYRLIELGFITSEKDMNYITKNLDGFTKRIAEAINGRQIEAKASKPSKTVKTKWDWKGMFYPNTTIKVRKSPGLSGTVVESGSWLYNKNDWVKFDQVIKKDGHWFIRFKYQAPGSSDKHFYCAVCKITDKEQKIKKEKYWGQIDWA
61473..62033                       PHAGE_Staphy_phiRS7_NC_022914: hypothetical protein; FO459_00345; phage(gi560185983)     2.09e-115           StaphylococcuslugdunensisMGKSTYLKINNQNDVDLQNILNDFINCFCNGYVEVKTKYKGLPTFKISFHKNNLPHLLGLHYTQNNVSAKKIIGRIAEGKITHETIKQHHEYDNIKDRLINYNFLHKCFIDREIRLCVIVPKKSINPQKIDVAFIDDKNSKLMILGLKKGYNSDFFIPATMYILGKNSSYRSMRRTDIIDIEWKSD
69125..69136                       attR                                                                                 N/A                 CAAGAGCAACAA

#### region 2 ####
complement(1010182..1011294)       PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; FO459_05055; phage(gi326781943)     1.32e-10            StaphylococcuslugdunensisMAPKLQAQFDAVKVLNETQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAISVGIPGIQVDGMDPLAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKDDIKKAIKEADKVEKQKVTDLMDIMYEEMPQNLAEQYEIYKEKESK
complement(1011461..1012090)       hypothetical protein; FO459_05060                                                    N/A                 StaphylococcuslugdunensisMKLYRALGVLLASTLLLAGCTTDRKEVRAYEDTIQQASSNEQVINSTGQKLNDLEKQKQQYYKKIVTNNPDTRVKVADKMISNINERSKEFNKEVKAMNASNKEFKKASKHINQIKDDSKRKELKELDDALKDKYKKHDDYAAAYRNILDKERSYFKLLKQKTVMQQQEKEKGEAINKAQKTFKQKFEAYIKALNKVNKEKGDIDKISE
1012228..1012779                   PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; FO459_05065; phage(gi100217)     5.15e-10            StaphylococcuslugdunensisMLTMKDIIKDGHPTLRAEAQDVDFPLSDEDKQTLKSMREFLINSQDDEIANRYGLRSGVGLAAPQIDISKKMIAVYLPDDGNGRSYDLMLVNPKVVSYSVQYAYLPTGEGCLSVDKNIPGLVHRHYRVTVKAKDIDGKDVKLRLKGYPAIVVQHEIDHLNGIMFYDHIDAEHPLTPLPDSIEV
1013214..1013432                   DUF1447 family protein; FO459_05070                                                  N/A                 StaphylococcuslugdunensisMAIFKVFYQHNKNEVIVRENTQTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSEHFNVENAE
1013432..1015111                   PHAGE_Cellul_phi19:3_NC_021789: metallo-beta-lactamase domain-containing protein; FO459_05075; phage(gi526176949)     3.62e-05            StaphylococcuslugdunensisMKQLHQNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRNAELIEITEDSVIKSKHFEVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAQLGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKIHHIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGAEVIHSKISNIHTSGHGSQGDQQLMLRLIQPKFFLPIHGEYRMLTAHGQTGVDCGVPEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNSNKDIQWHQIKSSIIETLQPYLYEKTARKPMILPVIMKVNEE
complement(1015236..1015409)       PHAGE_Staphy_Pvl108_NC_008689: putative transposase; FO459_05080; phage(gi119443708)     4.83e-28            StaphylococcuslugdunensisMYKDYNVTQLTLPIETSILIPTNDISRYVNEIVEIIPDNEFDEFKHHRGATSYHSKMI
complement(1015706..1016365)       TrkA family potassium uptake protein; FO459_05085                                    N/A                 StaphylococcuslugdunensisMDKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDEARVNEYSDIATHAVIADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELSDEHSLVELKASEKMAGQSIVNLDIRAQYGINIIAIKRGKEIIVSPDPNINIEIGDILIMIGHDNDLNRFEKKIVR
complement(1016435..1017451)       cytochrome d ubiquinol oxidase subunit II; FO459_05090                               N/A                 StaphylococcuslugdunensisMAYTGISMLVLWICLFFYVIAAGIYFGTGCFAFYMHMSGEEKKVKVLYKYMINPIWGLINICCVFCYVGMIALFPSAIHYLNTMILIPGSIALICIIIRGCSYIFINKRADISLPWLLIYCLSGLGIPAALASVLTISEGGYIIEDGAHLDLNWVQLAISPFAWSVVFLAVITVLYISAGFLTYSAAKLKDTHVYLTVRKWLLLWSMPMIMVSLFVFLSLRIQNANHFTNAIYNYWWMFTLSLLCFIIAMSLALLKKYHGIAMLMMILQLFFAFFGYGLSKLPYIVYPFVKITDTTVSVATGLTLMIVIILGLLLLIPSLILLLRLATDNKGIVKNQK
1017762..1017995                   PHAGE_Bacill_G_NC_023719: gp80; FO459_05095; phage(gi593777548)                      3.63e-10            StaphylococcuslugdunensisMAHITLYTQDDCPPCSFIKNYLHEHQIPFEEKHIKHQAYRVEMLEYDAFATPFILLNDEPMYTVDIDKINHAFNITV
complement(1018091..1019806)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; FO459_05100; phage(gi100140)     4.79e-05            StaphylococcuslugdunensisMSNLINGIAASDGVAIAKAYLLVEPDLSFTNEKITDIDAEINKFKNAVEASKIELTKIRNNAEKQLGADKAAIFDAHLLVLDDPELIQPIEDKISNEKVNAPQALNEVTSQFITIFESMDNEYMKERAADIRDVSKRLLAHILGVELPNPSIIDESVVIVGNDLTPSDTAQLNKDFVQGFVTNIGGRTSHSAIMSRSLEIPAVVGTKSITHQVKQGDMIIVDGITGDVIIDPTEDELIAYQHKRERFFEDKKELQKLRDAETVSLDGIHAELAANIGTPDDLYGVIENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQPDIFRPQLRALLRASAYGKLNIMFPMVATINEFRDAKALLLEEKENLKNEGHDVSDDIELGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAINCSTQEQVKELVHNIAR
complement(1019809..1020075)       PHAGE_Bacill_G_NC_023719: gp197; FO459_05105; phage(gi593777654)                     9.19e-07            StaphylococcuslugdunensisMEQKSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEADAIQSISDVLSKEGLTE
complement(1020227..1020769)       DUF697 domain-containing protein; FO459_05110                                        N/A                 StaphylococcuslugdunensisMGIRQNLSNRITTKVGQKVFKIEDIKEKNAMPTTQDELARCRERAEAIVKRKSLMSSTASVVPIPGLDFGVDIKLMRDIIEDVNKLYGLDHKQVNTLGDDLRERIFAAAAIQGSQFIGKKVSSAVLKIVIKDMAKRAAAKQTRWFPLVGQAISASISYYFMNKLGQDHIEKCEKVIKDII
complement(1020824..1021996)       PHAGE_Strept_20617_NC_023503: methyltransferase; FO459_05115; phage(gi588295144)     2.64e-87            StaphylococcuslugdunensisMKTAIINKGKEQKYLNHYPLVDEEDIYRQDHLKEGDLFQLTTDQGRYIATAYVGRQHKGLGWVLSYNPSEEITTSFFTQLFTDALAERDYYFHIDGTNAFRLFNAEGDGIGGLTIDNYNGHLLVQWYSKGIYKFKFEILQAIETVIPYKSIYEKMRFKDADYSGGFVKGEAPQFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDQYAEQKNVLNLFSYTGAFSVIAANHAQSTTSVDLANRSRALTEENFGLNGIDPKTQFIYVMDTFDFYKYAHRHNRFYDTIVIDPPSFARNKKKTFSVQKNYDELINGALSVLAPNGVLLLCTNSSIFSLKAFKSVIKSTLEQANVDYEIKEVMGLPKDFKTHPHYKPSKYLKAVFIQIKN

#### region 3 ####
2632400..2632411                   attL                                                                                 N/A                 AATAAATGTTGA
complement(2636639..2638021)       PHAGE_Staphy_Ipla7_NC_018284: integrase; FO459_12630; phage(gi399529147)             1.07e-121           StaphylococcuslugdunensisMKVAIYTRVSSAEQANEGYSIHEQKKKLISYCEIHDWNEYKVFTDAGISGGSMKRPALQNLMKQLSYFDLVLVYKLDRLTRNVRDLLDMLEEFEQYNVSFKSATEVFDTTSAIGKLFITMVGAMAEWERETIRERSLFGSRAAVREGNYIREAPFCYDNIEGKLHPNEHAKVIDLIVSMFKKGISANEIARRLNSSKVYVPKKKSWNRNSLIRLMRSPVLRGHTKYGDMLIENTHEPVLSKHDYNAINDAISSKTHKSKVKHHAIFRGALVCPQCNRRLHLYAGTVKDRKGYKYDVRRYKCETCSKNKDVKNVSFNESEVENKFINLLKSYELNKFHIRKVEPVKKIEYDIDKINKQKINYTRSWSLGYIEDDEYFELMEEINATKKMIEEQTTENKQSVSKEQIQSINNFILKGWEELTIKDKEELILSTVDKIEFNFIPKDKKHKTNTLDINNIHFKF
complement(2638078..2639001)       PHAGE_Staphy_Ipla7_NC_018284: hypothetical protein; FO459_12635; phage(gi399529148)     2.10e-63            StaphylococcuslugdunensisMKKVLFILLSCFLVLGACGNNDKNTEKVSEDKPQFKNDTLVLDQAVLKIDDTFILNDKDSGDKLLAFKYHVKNKSDSEDITSMNVWIACFEATQDSDNTVNKLDVGITPTTGKLGEWNEHSNDTIKKGKTTKGIMTYKLQNDEDVVLKATKGADGKKLGTKKIKLDDLKSEDYSVTEDLTDNSKKDNKSEDNDSKNVASAKSDDNTSKESKTEDGKTTSDSNNNSLSTTNDQQVNNQPSNAQETPPTTHDESQMGYGRGDYEQARKDSEKVWNDPNAHVGGPRWVGKNEGYESWAKRQQEVQNTPAE
complement(2639057..2639668)       PHAGE_Staphy_phi2958PVL_NC_011344: probable transcriptional repressor; FO459_12640; phage(gi209363558)     3.85e-131           StaphylococcuslugdunensisMKPDIKSRRKELNLTLEQVGDLVGVGKSTVRKWETGDIENMKRDKIVKLAKALRVSPSYIMGIEEEQPQLETLPVKKIPVVSKISAGLPIYSEENLIDYIYFATNKLNSDKEEFGLKVSGDSMDKIFQDGDIVVVEKDSVVENGQLGVIMINGYNATVKRIRYNGNQIILIPESNNQEHLPQVYGKDDEIKIIGRVVASQKLF
2639840..2640067                   PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; FO459_12645; phage(gi209363559)     3.64e-45            StaphylococcuslugdunensisMNKAKLYSALAMKEMHVNDFLKELNEHGLKLSKSAYYSRIRGEQEFDIKEIKTIVKVLNLTRDQMNDIFFEELVS
2640095..2641048                   PHAGE_Acidia_virus_NC_007409: hypothetical protein; FO459_12650; phage(gi75750457)     2.33e-05            StaphylococcuslugdunensisMKEIESIEISKLKFDEDINQLVPEMTEEEFSDLVKSIEEEGQRTPIHINKDNTILDGRHRVRALEELNIKEVSAIKENMSKSEALKFVRDTAVKRRSLNANQKLNIVLNTKDLIDDLQERAKTNQGTRNDLTFSSAEPKVKKTPVHENKEIADLAGVSTSTVMRAKKVKREDPEAYEKVIKENAGWDRAYNNLESIKKKKETKQNEVAKVETPVKEPEAPNTKNKENSKTEPDKPMDIREKINADTQSVEPEIRKAIKHETSANAFVSALEEIISIHDDEIEDFELFERYLSTLNYKALLQAKEKIENIIKIGGYER
2641045..2641812                   PHAGE_Staphy_phiRS7_NC_022914: hypothetical protein; FO459_12655; phage(gi560185991)     1.79e-122           StaphylococcuslugdunensisMKLRNLNVMGLMTDMSYQSPVKENQVKRILKNFDKDSLDAITVNLRPNGFYYIIDGQHRVEVLKRLKISTVPAKIHVGLTLEEEAKLYRNINTRPTKSPNSIAKADITQGDENAELINFSVLQAGMKIDYDNQNPKYGYISAYKALERIFLKYGSAGLVETLKFIKGTFGDEKRFFQGYVMEGLAKFLSTYYSDLKINELSKRLKKTGFDDFMTEVNKQSPSFSSKKECLPFVVADIYNKRRNENNKLKKLYLRD
2641881..2642192                   PHAGE_Staphy_phiETA2_NC_008798: hypothetical protein; FO459_12660; phage(gi122891724)     2.91e-52            StaphylococcuslugdunensisMNKLYKTPLLITMAVVTWKVWRIGNSKPTLGEVYRRHKPELPTVTLNKNGLFINDFRVPYVLEEGVNVKKSMNNLYTVSLVFFAKRIIADNYEADNPENQQLF
complement(2642140..2642523)       PHAGE_Strept_315.2_NC_004585: hypothetical protein; FO459_12665; phage(gi28876256)     4.95e-13            StaphylococcuslugdunensisMDYFNLYKVILEACDNPSVTDGQELIDIISTHPYILELREKYEDDLIISKIIQILENGIDDNVIKGDYVINMDNNFHRISGLTTSGHLYLKTLSNNSSFSKFKNFAKNTSSKITVDSLGYLLRNYLQ
2642581..2643333                   PHAGE_Staphy_187_NC_007047: ORF017; FO459_12670; phage(gi66395232)                   0.0                 StaphylococcuslugdunensisMQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTAYKDWFPRMLKYGFEENIDYTAIAQKRATAQGNMTHYIDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFKWLRQNGFLIKRQGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFVNKFLGEKQTS
2643349..2643492                   PHAGE_Staphy_88_NC_007063: ORF124; FO459_12675; phage(gi66396403)                    1.19e-18            StaphylococcuslugdunensisMLQKFRIAKEKNKLKLKLLKHASYCLETSNNPELLRAVAELLKKINR
complement(2643502..2644104)       PHAGE_Staphy_Ipla88_NC_011614: hypothetical protein; FO459_12680; phage(gi215401176)     8.26e-133           StaphylococcuslugdunensisMDNINLTQRQLDLIRKNQAILSKLPIETYAKVVNTMNDLRINQSKLSNWASYMHQVTKNHPMFKSNLFSEKILDEFISSNSFPEDEVRKVSTHLRKSFVDTVDVPVLGKTVDSAHPIDDVDTEKYNSVFNESLNHIFISPSAKFVKKVSVGSAIGVIPPIMVRTILDQYVNYFMLFNVIATLLTLYVIGNHLDDENSNDD
2644331..2644510                   hypothetical protein; FO459_12685                                                    N/A                 StaphylococcuslugdunensisMRSLTIALITFILISIITMVIFEIYFTTGLVVSAAIAIVAYWFYEHHFFDKKTATCANK
2644579..2645064                   PHAGE_Staphy_StB12_NC_020490: hypothetical protein; FO459_12690; phage(gi939535491)     9.21e-88            StaphylococcuslugdunensisMSNLFELSTNYQQIYNLISEQENELILKDTLASINDALENKADSYVAIIKSLEADNKVIDEEIKRLRQRKSTNENGIKRLKESLQQAMEETGKEKFKTSLNSYSIAKNPPTLYVQEENSIPKEYYIEQEPKLNKTELLKAVKDGLEIKGVELKQNRSLRVR
2645065..2645738                   PHAGE_Staphy_Ipla7_NC_018284: erf superfamily protein; FO459_12695; phage(gi399529156)     9.98e-44            StaphylococcuslugdunensisMTEKLNLYQKIADVKANIDGFTKDTKGYNYSYVSGSQVLHRIRNKMIEHNLLLVPKTSEENYKQIEVTRFNKKLHAKSLHRNLLKNLIYGLMQTSRKNNSKVSILANKMMYQRHMEQHHTQNVISNSSTFQPMKMTQTQNKNKKNITKLVAIQAFNKKYISLLSREKKSHSNKPKKHSEYKNMRLQNNKRQTQLIKFKLWLKIGRMNNGA
2645728..2646170                   PHAGE_Staphy_phi5967PVL_NC_019921: ssDNA-binding protein; FO459_12700; phage(gi431810257)     8.88e-25            StaphylococcuslugdunensisMNNEHSKLLGNLVADPELRGQNSNVANFRIAVQRPFKNKQTNEYETDFITCVAFGKQQKSSLTTLKRQNWSNWINSNRLRKRRTTCIHNCSSPSYVCRTQECANQITNNKMDKRKVTTTHFLTVCKTRMAQLILVTKIYHFAG
2646223..2646234                   attR                                                                                 N/A                 AATAAATGTTGA
2646246..2647050                   PHAGE_Staphy_Ipla7_NC_018284: replication protein; FO459_12705; phage(gi399529159)     4.40e-52            StaphylococcuslugdunensisMAEVSWIKLKVGMFDDSKIKYIEALPERDTIITLWVKLLTLAGKYNEQGYIMLSENLPYNEEMLANEFTYQLNKISTANVQNIRNDRCERCLSNLGKASKFRKAEETSTTKIRKAEAKSIRKRYRNVTRYRRRRRKRRRIEERRKRRLQKFNKLYYEPKLNTQSNATNKLCNRYRKACRSCGSYLYKDKGCHAGYLIKVLNNWAKNVKTKEDEKKDTKQKICCRFDCSNGKRAGRKLA
