gi|00000000|ref|CP043173.1|  Bordetella holmesii strain F586 chromosome, complete genome. 3696928, gc%: 62.69%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1448718..1449838)       PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_07270; phage(gi77747809)            3.77e-93            BordetellaholmesiiMKKRFTEEQIIGVLKEADAGAKPAELCRKHGISEATYYNWKAKFGGMTVSDAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRKLVSPQAKREAVRTLMTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLHSLAGLSVRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
1449812..1449910                   DUF423 domain-containing protein; FYA40_07275                                        N/A                 BordetellaholmesiiLLFRKSFLHCHSFGNGLYIDFVLITGSRSQKVK
1450698..1451483                   exodeoxyribonuclease III; FYA40_07280                                                N/A                 BordetellaholmesiiMQLATWNVNSLNVRLPQVIAWLADNPVDALCIQELKLADDKFPLEAFTQIGYHAAWAGQKTYNGVAILTREPGQAMVRNIPGFDDPQQRVIAVTLPTPAGEVRIICAYCPNGQSVGSDKYAYKLEWFTALHRWLQEELRAYPRLAILGDYNVAPADEDVHNPEKWEGQVLVSEPERAALKSLLDLGLTDAFRLFEQPEKSFTWWDYRMFAFRRNAGLRIDHILLSDALKHTCTACVIDKAPRGNEQPSDHTPVIATLDLSA
1451538..1451613                   tRNA                                                                                 N/A                 GGGGCGGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCGGGAGTTCGATCCTCCTCCGCTCCACCA
1451555..1451566                   attL                                                                                 N/A                 GGGAGAGCGTCG
complement(1451946..1452824)       PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_07290; phage(gi77747809)            3.22e-86            BordetellaholmesiiMVGGQKAAIIAQVGQIYSDAVGQYYIGADTRGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSVRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQVKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
1452823..1453833                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; FYA40_07295; phage(gi557307612)     3.46e-36            BordetellaholmesiiMLTQEQAVEIKVMARRGVSIREMAKQLGCSRNTIRRYLREAGAQQYKPREARTTKLDPYKDYLHGRIEAARPHWIPAAVLLREIQELGYPGGVTQLKEFLGGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDERADTWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYLKGSFCVPLAATLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPRESFQHPLSVYNELLEVRA
1453830..1454600                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; FYA40_07300; phage(gi557307613)     9.77e-65            BordetellaholmesiiMNLQHNRIEQICDVLKLERIGSEWPAMAQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAFASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRAIIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGESYRLKDKRKAGNIKIRN
complement(1454725..1455014)       PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_07305; phage(gi21230912)            3.48e-32            BordetellaholmesiiMKKRFTEEQIIGVLKEADAGAKPAELCRKHGISEATYYNWKAKFGGMTVSDAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRKSARRPNARRTC
1454988..1455074                   DUF423 domain-containing protein; FYA40_07310                                        N/A                 BordetellaholmesiiLLFRKSFLHCHSFGNGLYIDFVLITGSRS
complement(1455093..1455353)       hypothetical protein; FYA40_07315                                                    N/A                 BordetellaholmesiiMNEKMLTVLGWVATVTAVAMYVSYIPQISNNLDGMKGSWLQPLVAAINCTLWVTYGALKKPKRDWPLACVNFPGIVFGLIAFATSI
complement(1455549..1456636)       PROPHAGE_Xantho_306: ISxac2 transposase; FYA40_07320; phage(gi21244662)              9.10e-147           BordetellaholmesiiMKKSKFTDSQIIEAIKRAEAGLAVPELCRELGISSATFYKWRSKFGGMDVSMMSRMKELEAENARLRKMYVEERLKAELRAEALGKKVVRPSRRREMAQHMVRERGISVRLACEVVGISQTCYRYVCKRSTENDEIADWLMRLTDSHRSWGFGLCYLYLRNVKGYSWNHKRIYRIHRDLELNLRIKPRKRLVRQAPEPLTVPNQLNHVWSMDFMHDQLTDGRSIRLFNVIDDFNREALGIEIDFSLPSERVIRSLKQIIGWRGKPLAIRCDNGPEYLSDAITKWAGQWGIKLEYIQPGKPQQNAYVERFNRTVRYEWLSQYHWEDLDHVQRAATEWMWSYNHERPNMALGGYTPKQRLAMAA
complement(1456676..1456996)       hypothetical protein; FYA40_07325                                                    N/A                 BordetellaholmesiiMAGLVRRGASRCAHQGGEDILHLGCGAVVAQRCGPIRVDTAGLADVVVKIQGRVELGRQMGMDAIASPGPSKGGAMRSGSSRVTDRFMTEIPSRGGLCTVIPPQKR
complement(1457162..1457443)       PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: membrane-associated initiation of head vertex; FYA40_07330; phage(gi100034)     2.95e-15            BordetellaholmesiiMGTFRKRGKTWRAEISKAGIRESKSFDTKREAQEWVASRETEILTTAVGGIALQTVAQVLHRYSDEVSPRNKGHRCLFKLPPVIASNLGAVLG
1462917..1462928                   attR                                                                                 N/A                 GGGAGAGCGTCG

#### region 2 ####
complement(2365002..2365655)       PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; FYA40_11960; phage(gi100676)     2.43e-75            BordetellaholmesiiMQRFTDFYAAMYGGASVTPTGLGYIPMVVEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISFYINSPGGSVYAGMAIYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRIMIHQPSGGAQGQASDIQIQAKEILDLRERLNRILAENTGQPVERIAIDTERDNFMSAQDAVSYGLVDKVLARREDV
complement(2365658..2366968)       trigger factor; FYA40_11965                                                          N/A                 BordetellaholmesiiMQPVVETLSGLERRVDLAISVADVEKEVQAQLKRVARTAKVPGFRPGKAPMAMLERSHGPSIRYDVINSQVGRAFEQAVEGAKLRVAGSPSLEPKTEGVDEATLAFSATFEVYPEVAVPDLSGLAVTRFETEVSDAEVNKTLDVLRKQRATYETREGRAAQDDDRVILDFAGTIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAARGLKAGETKVFPLSFPEDYQGKEVAGKTAEFTITVKEVAEAVLPAVDAEFAKSLGQADADVEKLKADIRSNIEREVKVRSQGRTKTSVMDSLVDAAKFDVPKALVDNDVQGRIAQAREELKQRGVPNAENMPMPAEVFAAESERRVRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNYEQPAQVVSYYLSDRQRRAEIEAIVLEDNVVAYVLEKAKVTDEKVPFDQLMGMA
2367196..2367735                   PHAGE_Caulob_CcrColossus_NC_019406: UPF0114 protein; FYA40_11970; phage(gi414088293)     1.34e-32            BordetellaholmesiiMNPQQPPRLGILPALIFSSRWLQLPLYLGLIVAQGVYVFLFLKELWHLVSHTNSFGEMDIMLLVLGLIDVVMISNLLVMVIVGGYETFVSRLRLEGHPDQPEWLNHVNASVLKVKLAMAIIGISSIHLLRTFIEAGNLGSDNARFTETGVMWQTIIHVVFILSAVGIAYVDRLTSSADH
2367741..2367806                   SET domain-containing protein-lysine N-methyltransferase; FYA40_11975                N/A                 BordetellaholmesiiKKGSSRNSVEPCLIAVTLDP
2367832..2368158                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; FYA40_11980; phage(gi145708108)     3.97e-52            BordetellaholmesiiMLDRKTIERLGGWEGYRVERVVWPEGESRTVTIYLKPSARTMHCEHCGNRCRQVHETTTRRVRDLPLMALRVTLVVPRRRVWCEQCGGPHLERLSWLGRYQRVTDRLAE
complement(2368160..2368246)       DUF423 domain-containing protein; FYA40_11985                                        N/A                 BordetellaholmesiiLLFRKSFLHCHSFGNGLYIDFVLITGSRS
2368214..2368480                   PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_11990; phage(gi21230912)            1.84e-32            BordetellaholmesiiMAMKKRFTEEQIIGVLKEADAGAKPAELCRKHGISEATYYNWKAKFGGMTVSDAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRK
2368519..2368884                   PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_11995; phage(gi77747809)            6.38e-06            BordetellaholmesiiMTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVSADVILTHRVGVNLTHLGDDGGLLAADNVDSGASSGDQGNGASRRQHSGDGQAAGLLTQHDQAVSA
2368766..2369776                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; FYA40_12000; phage(gi557307612)     2.15e-36            BordetellaholmesiiMLTQEQAVEIKVMARRGVSIREMAKQLGCSRNTIRRYLREAGAQQYKPREARTTKLDPYKDYLHGRIEAARPHWIPAAVLLREIQELGYPGGVTQLKEFLSGYKHQEPEPVVRFETPPGKQMQADFTHIRRGRDPLMAFVATLGYSRSSWVRFTTDERADTWFGCLRQAFIYFGGVPQHVLFDNAGAIITERDAYGPGQHRWHNGLLAVAQEFGFTPRVCQPYRAKTKGKVERFNGYLKGSFCVPLAAPLKQAGLRFDVTAANAHVGRWLTEVADQRLHGTTRERPAKRLQEERLALLQLPAQHGMLVPATSHRPVPRESFQHPLSVYNELLEVRA
2369773..2370543                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; FYA40_12005; phage(gi557307613)     2.39e-64            BordetellaholmesiiMNLQHNRIEQICDVLKLERIGSEWPAMDQQCAREDASHGDFLERLLGIENDARIERQRAALMKIATLPSVKTIEDYDFAFASGAPRAQIQELAALSFIERAENVVFLGPSGVGKSHLAQALAYRAVMAGIKTRFLTAADLMMQLATAHKQDRLQQYFNRAIIGPRLLVIDEIGYLPFGREEANLFFNVVAQRYERTSIIVTSNLPFSQWASCFSEDQTLTAALLDRLLHHAHIVQIAGESYRLKDKRKAGNIKIRN
2370623..2371288                   PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; FYA40_12010; phage(gi17546158)     5.53e-81            BordetellaholmesiiMHVLLRREGWQANHKRIWRLYSLAGLSVRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY
complement(2371256..2371747)       DUF924 family protein; FYA40_12015                                                   N/A                 BordetellaholmesiiMPSSSSCQSSDVLDFWRHAGPQRWFARDVAFDREFRERFLEAHFAAARGELFDWEGSADGVLALLVLLDQFPRNAFRGTGHMFATDGLALAVARRAVAHGLDREVDTELRAFIYLPYEHAENIDAQQEGVELMTHLGGETLRFAIIHRDLPPDLVRHRHRAQG
complement(2371857..2372060)       PHAGE_Lactoc_bIL312_NC_002671: Csp; FYA40_12020; phage(gi13095918)                   4.76e-21            BordetellaholmesiiMETGVVKWFNAEKGYGFITPESGGKDLFAHFSEIQSNGFKTLEENQRVSYVTAMGPKGPQATKIQII
complement(2372378..2372698)       hypothetical protein; FYA40_12025                                                    N/A                 BordetellaholmesiiMEIISSQTGEFDSGISLQTTVDGIPFGVYIVLGVPDLDSIADFVPPEALSDGASIHAASVDTVDGAQEQIDEVLENLNPADVVVFFCADVDCFAAALDLLGLPIEE
complement(2372682..2373017)       hypothetical protein; FYA40_12030                                                    N/A                 BordetellaholmesiiMPEESLFWFMTATVTFALCAGVAAGCRKTLGSTLRAVALASALVAGAVAWMTPPMASGGMAWLLAAAGGLFSLVIACACALLTRRMRGAAVPAHDHDSHVANQESINGNYQ
complement(2373072..2373284)       autotransporter; FYA40_12035                                                         N/A                 BordetellaholmesiiMSYLAQLSNDDNVSYGGSAYKAALPGNRWRIGGGLALDTGPHRVFLDMRYGHGSDVSREVSAVVGYSYRF
2373360..2373698                   PHAGE_Stx2_c_1717_NC_011357: truncated transposase; FYA40_12040; phage(gi209447151)     2.94e-07            BordetellaholmesiiMSKTELAPVPKRRSYPKALKAQIVAQCSQPETSIAGVALSHGVNANLVHKWIRQAERQAPVAPAFVPVALPAVPSSGRHIEIRLSRGPAQATVQWPVSEAGACVAWLREWLR
2373665..2374030                   PHAGE_Stx2_c_1717_NC_011357: transposase; FYA40_12045; phage(gi209447152)            3.43e-07            BordetellaholmesiiMCGVATRVAAVIRVDAIWLATEPLDMRAGTETALARVVAVFGSARPHHAYCFANRRANRMKVLVHDGIGVWLAARRLNRGKFVWADALRGPHVAVDSEQWQALVLGLPWQHVGGAGAISVL
2374093..2375664                   PHAGE_Stx2_c_1717_NC_011357: transposase; FYA40_12050; phage(gi209447153)            4.06e-101           BordetellaholmesiiMSTASLDHLDAQQLRALAERLMGEVAARDAQIAAHDAVVAERDRVLHFKQTHIDQLMQELALYKRWRYGKRSEQLSPAQASLLEETMDADMAAIEEEVNALREAISTKPAPSQAPRRMRLPAELPRTDIHHEPASTTCRCGCGLKRIGEDVSEKLDYLPGVFTVERHIRGKWVCEHCETLTQVPVPAQVIDKGIPTAGLLAQVLVAKFADHLPLYRQEGIFARAGLALPRSTLGEWVGVCGLRLQPLVDALKAEVLGKPVLHADETPVQMLNPGAGKTHRAYLWAYTPTSFDSLRAVLYDFAPSRAGEHCRTFLQDWRGKLVTDDYVGYKAGFAAGIKELGRMAHARRKFHDLHASHQSQIAGEALDLFGALYGVERDVADLPADKRRRIRQDRARPIAETLHRWLIAQRQRVPDGSGTARAIDYSLKRWEALTRYLDDGDAPIDNNWVENQIRPWAIGRSNWLFAGSLHGGQRAAAIMSLIQSARLNGHDPYAYLKDVLTRLPTQKNSQIAELLPHRWQPAA
complement(2375834..2375912)       tRNA                                                                                 N/A                 GGACCTCTAGCTCATGCCTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGAGTTCGACTCTCGGGGGGGCTACCA
2376458..2376769                   DUF4148 domain-containing protein; FYA40_12060                                       N/A                 BordetellaholmesiiMKTLTSAVLVSLAVLSTGAFASQNIEPNDVPFQGVYSQSTSSVSRADVSADLQQAKAKGLYTFGELDYPAVQMSRQSLSRDQVKAELAQAKASGQYSFGELDY
complement(2376962..2378082)       PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_12065; phage(gi77747809)            3.68e-94            BordetellaholmesiiMKKRFTEEQIIGVLKEADAGAKPAELCRKHGISEATYYNWKAKFGGMTVSDAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRKLVSPQAKREAVRTLMTERSMGVTRACGLVGISRSLFAYESTRSGDAALTERMKEMAVAKRRYGYRRIHVLLRREGWQANHKRIWRLYSLAGLSVRKRKRKRIAATERVVRPAAIAPNQSWSMDFVADGLAYGRRFRCLTIVDDYTRECLAIEVDTSLPGLRVAMVLQRLAEMRGLPRSITVDNGPEFAGRALDAWAYQAGVKLSFIRPGKPVENAYIESFNGKFRDECLNEHWFLSLRQAKSLIENWRVEYNTDRPHSALGYLTPAQFVQAHQKEGLLPLGSMSVPY

#### region 3 ####
complement(2553288..2554292)       PROPHAGE_Shigel_301: serine protease; FYA40_12930; phage(gi24114232)                 4.26e-08            BordetellaholmesiiMASRVQHRSASQRARIFNAGAIRAGSSERRSFTPGLYVGAVLNLGAGQQAVRYHLIHAAGSQADSFALNNSQVDIGAYRYQLALNQDGTQADDWYLSTSRQSMSETTRNAVMLANVTPTIWNSELFILRSRLGELRGQAPSNSVWGKYITGKNRVTNNVAYDQTMNGFMVGADRQFDLQTARLFVGGLFSYSDSDLKADDSRGKVDSYALGMYTTWLHDSGYYVDGVVKVNRFKTDNDARFNAGTSKANDKTTGVGVSIEAGKHIVIDSFFVEPYLQLAAFRGGKTKYGYSNGVQVEADSVKSVSAEAGLTLGKTFTLDSGALIKPYARIALNH
complement(2554166..2555288)       PROPHAGE_Xantho_33913: IS1477 transposase; FYA40_12935; phage(gi21231080)            7.11e-29            BordetellaholmesiiMKKRFTEEQIIGVLKEADAGAKPAELCRKHGISEATYYNWKAKFGGMTVSDAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRKSARRPNARRSGHPSAAWVLPGPVGWEFRGRCLPTRAHAQAMLRPSAKRWQWRNDATAIGGSMCSYVAKAGKQITSESGGCTVWQGACENESVSESRRPSAWFAQRQSRRIRVGQWTLWPTAPMAADSAVLSSMTTLANAWPSRSIRRCRDCVLPWCCNGWRRCVACRDLLPWTTGQSSPEEPWTPGGLPSRRKAVVYSAGAGGERLYRKFQRQVPRRMPRALVLVPATGKLDRKLASRVQHRSASQRARIFNAGAIRAGSSERRSFTPGLYVGAVLA
2555262..2555348                   DUF423 domain-containing protein; FYA40_12940                                        N/A                 BordetellaholmesiiLLFRKSFLHCHSFGNGLYIDFVLITGSRS
2555350..2556027                   PHAGE_Bacill_G_NC_023719: gp350; FYA40_12945; phage(gi593777806)                     1.27e-23            BordetellaholmesiiSRASCRASANYLRAEAALPRRRYPQPPVSGAATLQKLQAQVDTLELENARLRRLALTDDLTGAYNRRYFATMLRDALRERVRGGGLALCLFDINNFKTINDRHGHFAGDYLLRRVALAARRCMRRTSDDLCRVGGDEFAAALSAPSASAALAQAQRVLDAIRAIAPLDTPHGPRHVTATFGLAWIAPGVSLTWEQAYSDADRALYRAKQAGKNRLHLIASRTAGA
complement(2556043..2556204)       hypothetical protein; FYA40_12950                                                    N/A                 BordetellaholmesiiMENDPLAIIHIHEDGGATLMGTDYRVEPEGVASMIRQGERFFWIEPPVISQEG
2556298..2556813                   PHAGE_Escher_RCS47_NC_042128: baseplate subunit; FYA40_12955; phage(gi100105)        2.59e-09            BordetellaholmesiiMTPGPRTSPLVFASASIQAIKAGKQRQTRRIVKPQPPPAATLWYCDPAHAERWIAATARPDDATPAQTVSKWLVCPYGKPGDLIDLAHESGQPFGRAILMGVRIQRLQAINEADAAAEGFAAASRLDEFLPETPPQAAFALAWGERYGARAWAANPWVWVLEFRLLNQNGH
2557086..2557304                   virulence protein; FYA40_12960                                                       N/A                 BordetellaholmesiiMKKWFVAAGIGAAGLMLSSAALARVDIGVSIGIPGVVYPAPVYYGGPRYYKGHRHYDRGHRGHRGHRGHWRD
complement(2557492..2557740)       hypothetical protein; FYA40_12965                                                    N/A                 BordetellaholmesiiMTSRMIGDFRVRCTVVQEEGNQYSVQICTRRVGGNAPEKCWTVPGQVSYQDREDAERTSQQIFERINGVRFNGEPEFAHASA
complement(2558019..2559374)       PHAGE_Bacill_G_NC_023719: gp287; FYA40_12970; phage(gi593777743)                     3.24e-09            BordetellaholmesiiMLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQALPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGVSSDENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLGLDFDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPKVDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPEHSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQNKPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP
complement(2559421..2560800)       PHAGE_Bacill_G_NC_023719: gp70; FYA40_12975; phage(gi593777538)                      1.19e-96            BordetellaholmesiiMRVGSARVFFLLSMSNDLFASDPPHRPYVPLAERLRPRTLSDVVGQSHLLGPDKPLRVAFDSGRPHSMIFWGPPGVGKTTLARLMADGFDAQFIAISAVLGGVKDIRDAVVTAQVAQGQGRRTILFVDEVHRFNKSQQDAFLPYVESGLFTFIGATTENPSFEVNSALLSRARVYVLQSLSAEELMQLVDRAVAALNEGLEDGQQIRFETEAREQLAAWADGDARRLISAVEVVAESAQAAGRDSVDAAWLETSLSQNLRRFDKGGDAFYDQISALHKSVRGSDPDAALYWLARMLDGGADPKYLARRLVRMAIEDIGLADPRATELAVNGADIYERLGSPEGELALAQAVVYMACAAKSNAVYNAYNAARKFAAEHGSAPVPLHLRNAPTKLMKQLGHGKAYRYAHDQPHAYAADEQYFPDGLNPTFYRPTDRGLEAKIQQKLAFLDELDAQERARKR
complement(2560863..2561495)       outer membrane lipoprotein chaperone LolA; FYA40_12980                               N/A                 BordetellaholmesiiMHMIRRAAGALAVFAVAALAAAPAWAATAQEQLDTFVATVKGATGSFKQSTVSPQGATQPAQSGTFAFQRPGKFKWAVQLPYEQLIVSDGKQVFQYDPDLAQVTVRQVDQVIGTSPAAILFGGGQLSQAFAVSALPDRDGLQWLRAKPRNADAGFSQVDIGLRDNQPARIELVDAFGQTTRVELSNLLPGAVPASEFQFTPPQGVDVVKM
complement(2561495..2563855)       PHAGE_Mycoba_Baka_NC_042316: neck protein; FYA40_12985; phage(gi100207)              1.21e-96            BordetellaholmesiiMPRISNATPRASRNTRNGPSPFQARISALLREARWILFAALAAWLTLVLATWSPADPGWSHSVSGDAIHNGGGTLGAYLADILLYLFGFSAWWWVVLLLHRVRAGYRRLASNLRVTSGKQPDALPRVHWEEGIGFVLLLTCSLGIEALRLYSWGMHLPGGTDGESGAGGVIGQMLAGWLSRGVGFTGGTLALLVLLAVGLSLFFSFSWLQIAERVGSWLEGLVRRVRDSYAAREDRKVGEVAKAVRTEQVVAKQEKLVHEQPVRIEPAITVVPRSDRAEKEKQQSLFAPPAGESDLPAIGLLDPPLQNQETVSAETIEFTSRLIEKKLADFGVSVVVVAAQAGPVITRYEIEPATGVKGSQIVNLAKDLARALSLVSIRVVETIPGKNLMGLELPNPRRQMVKLSEILGSQTYHASHSVLTMALGKDIAGNPVVADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKTDASHTRLILIDPKMLEMSVYEGIPHLLAPVVTDMRHAANALNWCVGEMEKRYRLMSKMGVRNLAGYNSKIRDAIKREEPIPNPFSLTPDAPEPLQALPHIVVVIDELADLMMVVGKKIEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQMGAETLLGQGDMLYMPPGTGLPVRVHGAFVHDDEVHRVVEALKAQGEPNYIDGLLEGSEGETGDGLSSVTGMGDAESDPMYDQACEVVLKHRRASISLVQRHLRIGYNRAARLLEQMEQAGMVSPMQSNGNREILVPAREEA
2563897..2564856                   PHAGE_Bacill_G_NC_023719: gp344; FYA40_12990; phage(gi593777800)                     1.59e-69            BordetellaholmesiiMSTPKHAKVLILGSGPAGYTAAVYAARANLSPALITGLAQGGQLMTTTEVDNWPADVQGVQGPDLMQRFLQHAERFNTEILFDHIAKVDLSRRPFTLTGDTGNLYTCDALIIATGASAKYLGLASEQTFMGRGVSGCATCDGFFYRNKDVVVIGGGNTAVEEALYLSNICRKVTLIHRRDKFRAEPILVDKLMDKVANGNMELKLFHTLDEVLGDDSGVTGVRIRSTETDATEDLDVDGCFVAIGHQPNTGIFEGQLEMKDGYIITKSGLSGMATMTSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRWLENAGQ
2564843..2565535                   DNA mismatch repair protein MutS; FYA40_12995                                        N/A                 BordetellaholmesiiMRGNKTGLADLKRLHEQVRETRARAEAAEREAAARASAAAPEADVAAFRRAVQAATPLKPSGRLANRRPDATPATATAAAVASRRAAALGEAAPRADAGVSDASDIGALLTDGGTAYVRAGVAPDTARNLKRGQWRVGAELDLHGLRVEQARHAVLSFLDECLEHGIRCVRIVHGKGYGSQGLEPVLKDKARTWLVQKADVLAFSEAPERGGGAGALLVLLRQAEAGGRP
2565532..2565864                   PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; FYA40_13000; phage(gi311992758)     4.55e-10            BordetellaholmesiiMNSWIHLSMAIVAEIIATSALKSSEGFTRLLPSLVTVAGYAIAFYFLALTLRVIPVGVAYAIWSGVGIVLISLVGALLFKQHLDLPAIIGIALILAGVVVMNVFSKSVGH
2565980..2566930                   PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: transposase; FYA40_13005; phage(gi971753894)     3.08e-11            BordetellaholmesiiMNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
