gi|00000000|ref|CP045400.1|  Halomonas sp. THAF12 plasmid pTHAF12_a, complete sequence. 169237, gc%: 61.26%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4317..4339                         attL                                                                                 N/A                 TCTACTTATTAAAATGATGATTT
complement(5584..6525)             Integrase; FIU88_17775                                                               N/A                 HalomonasspTHAF12MAKANNFGLRTRDLAKAGTFAANRAAREGVASYASAAALGDRWQAFAAYARQEGIRRMEHVTAQHVAAYGQGIAERVAAGELSASYGQNLVSAVNSVMRLASQGRWQSVSPTKDCGIEKRSNVRQEAPQGVERGTVATVADTLRTSGNERGAAVVELARELGLRSKEASLIDARAALRQAQQADQVTITSGTKGGRERTVPVTTQQQVAALTRADDAQGGARSLVPPEQNWREWREGGLRDAREALQAAGIGRLHELRAAYAAERCQQLTGHQPPMLGGQASREADRAARLAIAKELGHSRVAIMTAYIGRAA
8202..9143                         Replicase family protein; FIU88_17780                                                N/A                 HalomonasspTHAF12MEAVSHFAETLPARPRCANDPAVDNRIRIRSKALGYRLIEPNTAGMVRWLMFDVDRPEAVLDWEDRRVPAPTLTCQNPENGHAHLLYALTVPVARTNAARLGPLRYAETVERSLRAALQADRGYARTLVKNPLHAHWRVHQWADAYALGELADELTLIPFEKAANDEIAGLGRNCETFERLRHHAYRAVRDFWGPGGEERFKAHLVEVAGDIQGAFTTPLPAKEVEGIARSVAKWTWKRFSPETFRDFVERTHTPEIQAKRGRKGGKAKGAKRREELMPRVLELVGQGKSQREVANLVGVPQKTVSRWLKRSG
9795..9806                         attL                                                                                 N/A                 ATTTTTTCGCTG
9904..11298                        Plasmid recombination enzyme; FIU88_17785                                            N/A                 HalomonasspTHAF12MAARTKTTRNNAVIRATKLNRHKLGGSAAHTWRTMSVPHADPERTHLNEDWRPASGPDQLRAAIRGRLAFADNVAADSVRAIEYVVTGPHEVFAEQGGPVEWRRYFSDALAFLEARHGAENIVGVNVQLDERTPHLVVYAVPLVDYPATTRTRNVILGKQGGEWVRGPKTFDVPARTALSATHFMGRRDQLRELQTRFAEEVATPHGLRRGLRHSAATHVTTKAYHQALARGLAENLSLSPDDLTRQGLLWGRESPEEHAARVTNFVVEHYAPTVARAATADLDRRRADEMEETARRTEAALEKEREAHRQTRERLTALAGGLSAEEVAKIEGFARKCRRQRREAEEARKREEAQRQEAERKERQRLEDERAARLLRLTPEALARLESGERVRAWRLAVKRDDLEATLGAWAESGLFEVDGTLTPKGRALIEGEAPKAPESGPAREATPAKPWPGMSSRSPFER
11345..11620                       PHAGE_Burkho_phi52237_NC_007145: pANL56; FIU88_17790; phage(gi72537723)              8.26e-12            HalomonasspTHAF12MIIDFDPNKSARNERERGLPFTEVERFDWEGAVFSEDNRFEYPERRFIAMGKIGQRVHVVCFTPIEDGIRVISLRKANPREVRRYENATHG
11598..11873                       PHAGE_Burkho_phi52237_NC_007145: hypothetical protein; FIU88_17795; phage(gi117676336)     2.06e-06            HalomonasspTHAF12MKTRLTDKDGEVRELTDADVKRMRPMSEVLPANLQRTIGQRGKQHAPTKVKTSIRLSQEVIEHFKEEGEGWQRRIDQALKQYIREHGHGHG
12067..12711                       PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; FIU88_17800; phage(gi100154)     6.88e-43            HalomonasspTHAF12MGYIIGVVSQKGGVGKSTVARAIATTYAAADWNVKIGDLDINQSTSFTWLQRRLGRGVEPVVAVETFGTVGQALKIADAYDLMVLDGAPHATRATAEIGQKSHLLVLPSGLSLDDLEPTVILANTLVSEHGVPVERIAIALSRVGDSPRELEEARAYLEATPYHVLDSQIPEKTALRRAQDGGLSVVETPYKGPREQADRLIQAIIDRLESVTN
12745..12987                       PHAGE_Sulfol_10_NC_034625: hypothetical protein; FIU88_17805; phage(gi100014)        1.68e-05            HalomonasspTHAF12MAAPSKKPGSKGLPPQPTQTAHVVGNHTSKPEAGATVPCNFRVDPEFKKRLKTFAATHDMSMVEVFETAVNEYMERKGGA
13097..13330                       hypothetical protein; FIU88_17810                                                    N/A                 HalomonasspTHAF12MTLKKPVTERALMARLNRRLKKDGRKVHKTPPSAQQELGTWHVVNMEQGTIADHGIEDLEKFAREEGVLKPFEALEG
13403..13585                       hypothetical protein; FIU88_17815                                                    N/A                 HalomonasspTHAF12MHVHDKPRRVRVGTLTRRQLAALVEVLTPYSAEPVTAPVMELATRLARVETANASMEAAQ
13582..13725                       hypothetical protein; FIU88_17820                                                    N/A                 HalomonasspTHAF12MKRLSREAQERLDDAYDALRLELAGGPTAEQTLKRRESTETRIQRAA
13725..14168                       Prophage CP4-57 regulatory protein (AlpA); FIU88_17825                               N/A                 HalomonasspTHAF12MKTTIIFDSSLIADPEQRASVEESPGFELANLLRTLADECDRKAGLPMSRALRLDSGPIVGEVATEQAWGDQDELVFLTTQDVIAKTGLPSTTLQRRRENDPTFPKPVVLSRAAGRARMIRWVEAEVEAWMRQQAMCRLEAAEDIEA
14165..14272                       hypothetical protein; FIU88_17830                                                    N/A                 HalomonasspTHAF12MIPLIELLSVVTVLALVTPGLVEFDKRVMERRHAS
14262..14744                       hypothetical protein; FIU88_17835                                                    N/A                 HalomonasspTHAF12MRLEQLGNDDQLIVCESERDANRAALLLEAVITRDGVDRLHAHDRAAIEAAHGILSGLVERLEERQELWDEELASRWNLAEQAGVVKASSKVRAGNRPAYEANYVLGTTSVLFRRPGDDDMLPYDCYPMEMASSVLPLVERMALNPKLTPKASGAEEVGA
14741..14908                       hypothetical protein; FIU88_17840                                                    N/A                 HalomonasspTHAF12MTTMKAERLPVAPLEAYRQRAESRPLRSKRALRDMLRAADSIRAAGFRQTEGKGR
14905..15693                       hypothetical protein; FIU88_17845                                                    N/A                 HalomonasspTHAF12MTMIEQRHFDEAERMLADGRGRHSEAFHEGRCYALAWCLAGKPTPTPERNRETACRYERGTAECDAWNSGWHAGHRLAVNLRIVATPGVIHEFPLEQGGSVVVREPELGAYTWEIVDEAGEILREAGGYPSLATVLRDALGEVMAPRPSPEPALAADDERLAAEFGRYGPTEATCAWLPREAAEFVALVKTGRVADPQKAALAWLMMRHDEVLLSDDPERSESPVIVSRHIGELCDAGAEAVIDVEEAQARALMFRANIEND
15717..16547                       hypothetical protein; FIU88_17850                                                    N/A                 HalomonasspTHAF12MRADCRARWDVDADAGEVGAWYGDHGAELSMMPMELVEQVAHTVPGGSAIEGHALVAELADCLSGQLNALAPGVVRAELSAADRWSPSELDDDHANRARLTWLACQEFRDLWDDAAGCAETGEEPPKDNDAMERAMPTMKTSPQLDRDLLRDAHTDLEAVRDMLREGDNENARRAVGSLLGRIEARQSDWHNQRLGDWQYRYDQELEAIHVESADGYRVRYQFDDEWLWFQCPGQDDMLQRSCHEMREPVEVLNRAEELRQEHLQEEAAHRRLSGE
17015..18361                       PHAGE_Salmon_SEN34_NC_028699: integrase; FIU88_17855; phage(gi966201449)             1.39e-25            HalomonasspTHAF12MRTSQSPRLTPRRVETLPAKDRPYRVPDTGAPAPGLMLVIYPSGHRAWLSRLTIAAGHLPPAVPGEPLRRRPGRRVDVQIGAWPAWNLDAARERHREHVAAAARGHDPRHLMAASEVVPLFGELMRRWLAHLERMDELATSTQAAHRQRWQAYLSRLDGVPVDQLTRQHIAPELTRAAERSAVQARATLSTLRSALEWGHGQGWVAENPASGMRPATYGGKPGRARDVALSLEELREVWVALDAGRLSTATVDAIRLLILTGARRAEVAGMAVEELDLDRGEWRLPAERTKTKEGRVVYLCEEAVALLRARLAAIGAASGPVFRAGTGDKALTPASLSRAVQRLQRQPDRQGKGGGALATLGQAKPFTVHDLRRTCATLWGEHLAAPPHVIERLLGHAPANALEAVYQRQRYHDEQRALVARWGALVRDHVASDPGAAVVPFRRDATA
19338..19349                       attR                                                                                 N/A                 ATTTTTTCGCTG
27385..27407                       attR                                                                                 N/A                 TCTACTTATTAAAATGATGATTT
