gi|00000000|ref|CP045402.1|  Halomonas sp. THAF12 plasmid pTHAF12_c, complete sequence. 23068, gc%: 65.95%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1268..2209)             Integrase; FIU88_18990                                                               N/A                 HalomonasspTHAF12MAKANNFGLRTRDLAKAGTFAANRAAREGVASYASAAALGDRWQAFAAYARQEGIRRMEHVTAQHVAAYGQGIAERVAAGELSASYGQNLVSAVNSVMRLASQGRWQSVSPTKDCGIEKRSNVRQEAPQGVERGTVATVADTLRTSGNERGAAVVELARELGLRSKEASLIDARAALRQAQQADQVTITSGTKGGRERTVPVTTQQQVAALTRADDAQGGARSLVPPEQNWREWREGGLRDAREALQAAGIGRLHELRAAYAAERCQQLTGHQPPMLGGQASREADRAARLAIAKELGHSRVAIMTAYIGRAA
3886..4827                         Replicase family protein; FIU88_18995                                                N/A                 HalomonasspTHAF12MEAVSHFAETLPARPRCANDPAVDNRIRIRSKALGYRLIEPNTAGMVRWLMFDVDRPEAVLDWEDRRVPAPTLTCQNPENGHAHLLYALTVPVARTNAARLGPLRYAETVERSLRAALQADRGYARTLVKNPLHAHWRVHQWADAYALGELADELTLIPFEKAANDEIAGLGRNCETFERLRHHAYRAVRDFWGPGGEERFKAHLVEVAGDIQGAFTTPLPAKEVEGIARSVAKWTWKRFSPETFRDFVERTHTPEIQAKRGRKGGKAKGAKRREELMPRVLELVGQGKSQREVANLVGVPQKTVSRWLKRSG
5479..5490                         attL                                                                                 N/A                 ATTTTTTCGCTG
5588..6982                         Plasmid recombination enzyme; FIU88_19000                                            N/A                 HalomonasspTHAF12MAARTKTTRNNAVIRATKLNRHKLGGSAAHTWRTMSVPHADPERTHLNEDWRPASGPDQLRAAIRGRLAFADNVAADSVRAIEYVVTGPHEVFAEQGGPVEWRRYFSDALAFLEARHGAENIVGVNVQLDERTPHLVVYAVPLVDYPATTRTRNVILGKQGGEWVRGPKTFDVPARTALSATHFMGRRDQLRELQTRFAEEVATPHGLRRGLRHSAATHVTTKAYHQALARGLAENLSLSPDDLTRQGLLWGRESPEEHAARVTNFVVEHYAPTVARAATADLDRRRADEMEETARRTEAALEKEREAHRQTRERLTALAGGLSAEEVAKIEGFARKCRRQRREAEEARKREEAQRQEAERKERQRLEDERAARLLRLTPEALARLESGERVRAWRLAVKRDDLEATLGAWAESGLFEVDGTLTPKGRALIEGEAPKAPESGPAREATPAKPWPGMSSRSPFER
7029..7304                         PHAGE_Burkho_phi52237_NC_007145: pANL56; FIU88_19005; phage(gi72537723)              8.26e-12            HalomonasspTHAF12MIIDFDPNKSARNERERGLPFTEVERFDWEGAVFSEDNRFEYPERRFIAMGKIGQRVHVVCFTPIEDGIRVISLRKANPREVRRYENATHG
7282..7557                         PHAGE_Burkho_phi52237_NC_007145: hypothetical protein; FIU88_19010; phage(gi117676336)     2.06e-06            HalomonasspTHAF12MKTRLTDKDGEVRELTDADVKRMRPMSEVLPANLQRTIGQRGKQHAPTKVKTSIRLSQEVIEHFKEEGEGWQRRIDQALKQYIREHGHGHG
7751..8395                         PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; FIU88_19015; phage(gi100154)     6.88e-43            HalomonasspTHAF12MGYIIGVVSQKGGVGKSTVARAIATTYAAADWNVKIGDLDINQSTSFTWLQRRLGRGVEPVVAVETFGTVGQALKIADAYDLMVLDGAPHATRATAEIGQKSHLLVLPSGLSLDDLEPTVILANTLVSEHGVPVERIAIALSRVGDSPRELEEARAYLEATPYHVLDSQIPEKTALRRAQDGGLSVVETPYKGPREQADRLIQAIIDRLESVTN
8429..8671                         PHAGE_Sulfol_10_NC_034625: hypothetical protein; FIU88_19020; phage(gi100014)        1.68e-05            HalomonasspTHAF12MAAPSKKPGSKGLPPQPTQTAHVVGNHTSKPEAGATVPCNFRVDPEFKKRLKTFAATHDMSMVEVFETAVNEYMERKGGA
8781..9014                         hypothetical protein; FIU88_19025                                                    N/A                 HalomonasspTHAF12MTLKKPVTERALMARLNRRLKKDGRKVHKTPPSAQQELGTWHVVNMEQGTIADHGIEDLEKFAREEGVLKPFEALEG
9087..9269                         hypothetical protein; FIU88_19030                                                    N/A                 HalomonasspTHAF12MHVHDKPRRVRVGTLTRRQLAALVEVLTPYSAEPVTAPVMELATRLARVETANASMEAAQ
9266..9409                         hypothetical protein; FIU88_19035                                                    N/A                 HalomonasspTHAF12MKRLSREAQERLDDAYDALRLELAGGPTAEQTLKRRESTETRIQRAA
9409..9852                         Prophage CP4-57 regulatory protein (AlpA); FIU88_19040                               N/A                 HalomonasspTHAF12MKTTIIFDSSLIADPEQRASVEESPGFELANLLRTLADECDRKAGLPMSRALRLDSGPIVGEVATEQAWGDQDELVFLTTQDVIAKTGLPSTTLQRRRENDPTFPKPVVLSRAAGRARMIRWVEAEVEAWMRQQAMCRLEAAEDIEA
9849..9956                         hypothetical protein; FIU88_19045                                                    N/A                 HalomonasspTHAF12MIPLIELLSVVTVLALVTPGLVEFDKRVMERRHAS
9946..10428                        hypothetical protein; FIU88_19050                                                    N/A                 HalomonasspTHAF12MRLEQLGNDDQLIVCESERDANRAALLLEAVITRDGVDRLHAHDRAAIEAAHGILSGLVERLEERQELWDEELASRWNLAEQAGVVKASSKVRAGNRPAYEANYVLGTTSVLFRRPGDDDMLPYDCYPMEMASSVLPLVERMALNPKLTPKASGAEEVGA
10425..10592                       hypothetical protein; FIU88_19055                                                    N/A                 HalomonasspTHAF12MTTMKAERLPVAPLEAYRQRAESRPLRSKRALRDMLRAADSIRAAGFRQTEGKGR
10589..11377                       hypothetical protein; FIU88_19060                                                    N/A                 HalomonasspTHAF12MTMIEQRHFDEAERMLADGRGRHSEAFHEGRCYALAWCLAGKPTPTPERNRETACRYERGTAECDAWNSGWHAGHRLAVNLRIVATPGVIHEFPLEQGGSVVVREPELGAYTWEIVDEAGEILREAGGYPSLATVLRDALGEVMAPRPSPEPALAADDERLAAEFGRYGPTEATCAWLPREAAEFVALVKTGRVADPQKAALAWLMMRHDEVLLSDDPERSESPVIVSRHIGELCDAGAEAVIDVEEAQARALMFRANIEND
11401..12231                       hypothetical protein; FIU88_19065                                                    N/A                 HalomonasspTHAF12MRADCRARWDVDADAGEVGAWYGDHGAELSMMPMELVEQVAHTVPGGSAIEGHALVAELADCLSGQLNALAPGVVRAELSAADRWSPSELDDDHANRARLTWLACQEFRDLWDDAAGCAETGEEPPKDNDAMERAMPTMKTSPQLDRDLLRDAHTDLEAVRDMLREGDNENARRAVGSLLGRIEARQSDWHNQRLGDWQYRYDQELEAIHVESADGYRVRYQFDDEWLWFQCPGQDDMLQRSCHEMREPVEVLNRAEELRQEHLQEEAAHRRLSGE
12699..14045                       PHAGE_Salmon_SEN34_NC_028699: integrase; FIU88_19070; phage(gi966201449)             1.39e-25            HalomonasspTHAF12MRTSQSPRLTPRRVETLPAKDRPYRVPDTGAPAPGLMLVIYPSGHRAWLSRLTIAAGHLPPAVPGEPLRRRPGRRVDVQIGAWPAWNLDAARERHREHVAAAARGHDPRHLMAASEVVPLFGELMRRWLAHLERMDELATSTQAAHRQRWQAYLSRLDGVPVDQLTRQHIAPELTRAAERSAVQARATLSTLRSALEWGHGQGWVAENPASGMRPATYGGKPGRARDVALSLEELREVWVALDAGRLSTATVDAIRLLILTGARRAEVAGMAVEELDLDRGEWRLPAERTKTKEGRVVYLCEEAVALLRARLAAIGAASGPVFRAGTGDKALTPASLSRAVQRLQRQPDRQGKGGGALATLGQAKPFTVHDLRRTCATLWGEHLAAPPHVIERLLGHAPANALEAVYQRQRYHDEQRALVARWGALVRDHVASDPGAAVVPFRRDATA
15022..15033                       attR                                                                                 N/A                 ATTTTTTCGCTG
