gi|00000000|ref|CP045947.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4964749, gc%: 52.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1242166..1242741                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; GJE12_05975; phage(gi712913000)     1.52e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1242773..1243423                   anti-sigma-E factor RseA; GJE12_05980                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1243423..1244379                   sigma-E factor regulatory protein RseB; GJE12_05985                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1244376..1244855                   SoxR-reducing system protein RseC; GJE12_05990                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1245106..1245118                   attL                                                                                 N/A                 TATGAAGAACATA
1245353..1246582                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; GJE12_05995; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1246560..1246844)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06000; phage(gi169257265)     2.94e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1246885..1247124)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06005; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1247167..1248324)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; GJE12_06010; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVNAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
complement(1248287..1251214)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; GJE12_06015; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKIFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1251341..1251691)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06020; phage(gi169257261)     2.14e-82            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1251713..1251871)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06025; phage(gi169257260)     1.82e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
complement(1252270..1252674)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; putative repressor protein; helix-turn-helix motif; GJE12_06030; phage(gi169257258)     3.00e-18            SalmonellaentericasubspentericaserovarTyphimuriumMNFGERLQRVLNETGITQSELGRRVGATSQSVNGWCQSGILPRKDILELLPKATGKPLYWFFMEDDEESDVPERLTQGGPTDLNDRQKRLLEIFDQLPTVEQDRFIELAGARLQELDDFMAEYQRRRKIEPPSR
1252804..1253040                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; GJE12_06035; phage(gi169257257)     6.68e-17            SalmonellaentericasubspentericaserovarTyphimuriumMKVTVQRKILSVCSQAELGRRLGRRAQTVNGWFKNKVPGELVVRVARAIDWKVTPHELRPDLYPNPTDGLPSQEASAK
1253006..1253380                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; GJE12_06040; phage(gi169257256)     1.07e-87            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1253465..1254448                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; GJE12_06045; phage(gi169257255)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1254451..1255200                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; GJE12_06050; phage(gi169257254)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1255211..1255558                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06055; phage(gi169257253)     4.28e-79            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTHSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1255555..1256079                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE12_06060; phage(gi169257252)     5.29e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNAIHEIRTAGIKVKES
1256079..1256552                   PHAGE_Pectob_ZF40_NC_019522: putative methylase; GJE12_06065; phage(gi422936660)     2.93e-85            SalmonellaentericasubspentericaserovarTyphimuriumMESQSILDMCCGSRMFWFNKRDERAVFADIRAEEHILCDGRRLVISPDLIADFRALPFADASFPVVVFDPPHLERVGQTAWMGKKYGRLNKKTWRSDLRAGFKEAFRVLRAHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
1256556..1256831                   PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; GJE12_06070; phage(gi423262432)     1.73e-28            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIEQYANDPRMFNVNDEIRQIARIALASLEEEAIGEVSEKRHGLVMDGIVDLGGEYTYRIIKGKAMKRLPLGTKFYIAPPALVV
1257417..1257656                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; GJE12_06075; phage(gi169257250)     1.36e-49            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRTKQLPEGAVPALEKELIARLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFYAY
1257646..1257951                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; GJE12_06080; phage(gi423262436)     1.56e-53            SalmonellaentericasubspentericaserovarTyphimuriumMHIKHRGVADVSRNKVSVTGGYMLEDLPESGYAVIRCYDHCVVARFGSIPDSGRALMYRRGDEISFVPLHPDDIVGTPTLFTQMLEKAGYRITRCFDTLQM
1257991..1258593                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE12_06085; phage(gi169257248)     5.00e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
1258802..1259413                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; GJE12_06090; phage(gi169257246)                 1.02e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1259410..1259550                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE12_06095; phage(gi169257245)     5.71e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
1259547..1260224                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; GJE12_06100; phage(gi169257244)     2.69e-165           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
1260497..1261060                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE12_06105; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarTyphimuriumMTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
1261402..1261478                   tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
1261567..1261755                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06115; phage(gi169257242)     3.75e-40            SalmonellaentericasubspentericaserovarTyphimuriumMKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(1261970..1262656)       PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; GJE12_06120; phage(gi169257241)     7.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumMPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
1262932..1263261                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; GJE12_06125; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1263245..1263697                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; GJE12_06130; phage(gi169257239)     2.07e-105           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1263715..1264167                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; GJE12_06135; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(1264403..1264804)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06140; phage(gi169257237)     7.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
1265091..1265636                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; GJE12_06145; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1265608..1267539                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; GJE12_06150; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1267523..1267726                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; GJE12_06155; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1267723..1269303                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; GJE12_06160; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
1269293..1270789                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; GJE12_06165; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
1270802..1271149                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; GJE12_06170; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
1271204..1272232                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; GJE12_06175; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
1272290..1272649                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; GJE12_06180; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
1272660..1273043                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; GJE12_06185; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarTyphimuriumMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
1273071..1273649                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; GJE12_06190; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(1273698..1274828)       PHAGE_Phage_Gifsy_1_NC_010392: transposase; GJE12_06195; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
1274937..1275338                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; GJE12_06200; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1275346..1276092                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; GJE12_06205; phage(gi169257224)     5.43e-174           SalmonellaentericasubspentericaserovarTyphimuriumMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSIGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
1276143..1276538                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; GJE12_06210; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
1276535..1276873                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; GJE12_06215; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarTyphimuriumMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
1276845..1279940                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE12_06220; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
1279943..1280272                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE12_06225; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarTyphimuriumMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
1280282..1280980                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE12_06230; phage(gi169257219)     2.74e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
1280987..1281724                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE12_06235; phage(gi169257218)     5.25e-148           SalmonellaentericasubspentericaserovarTyphimuriumMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
1281622..1282269                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE12_06240; phage(gi169257217)     6.47e-156           SalmonellaentericasubspentericaserovarTyphimuriumMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
1282331..1285693                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; GJE12_06245; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
1285732..1285974                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06250; phage(gi169257215)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
1286028..1288400                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; GJE12_06255; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1288397..1289221                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; GJE12_06260; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
1289211..1289789                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; GJE12_06265; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1289886..1290113)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE12_06270; phage(gi169257211)     6.87e-51            SalmonellaentericasubspentericaserovarTyphimuriumMPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
1290220..1290432                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE12_06275; phage(gi100036)            3.13e-08            SalmonellaentericasubspentericaserovarTyphimuriumMISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
1290495..1290560                   DUF4113 domain-containing protein; GJE12_06280                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKREILSLRYTTRYSELLRVK
complement(1290924..1291110)       PROPHAGE_Escher_CFT073: putative transposase; GJE12_06285; phage(gi26246170)         2.33e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPIIAPIPRTERRLMQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLDC
1291140..1291304                   PROPHAGE_Xantho_33913: ISxcd1 transposase; GJE12_06290; phage(gi21231544)            4.98e-07            SalmonellaentericasubspentericaserovarTyphimuriumMAIDQITQSGLSSIKVIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
complement(1291339..1291698)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE12_06295; phage(gi169257210)     2.50e-82            SalmonellaentericasubspentericaserovarTyphimuriumMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSN
complement(1292017..1292154)       hypothetical protein; GJE12_06300                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(1292639..1294132)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; GJE12_06305; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
1294536..1294548                   attR                                                                                 N/A                 TATGAAGAACATA

#### region 2 ####
complement(1678037..1678240)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; GJE12_08030; phage(gi428782403)     2.21e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK
1678543..1679334                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE12_08035; phage(gi169257320)     3.48e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
1679631..1679834                   phage tail protein; GJE12_08040                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
1680003..1682249                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE12_08045; phage(gi169257322)     1.14e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
1682334..1682570                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE12_08050; phage(gi23505490)     8.21e-52            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1682578..1683567                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_08055; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1683582..1683950                   PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; GJE12_08060; phage(gi148609434)     4.66e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(1683979..1685310)       AAA family ATPase; GJE12_08065                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
1685607..1685936                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); GJE12_08070; phage(gi23505495)     2.54e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
1685950..1686393                   PHAGE_Entero_SfV_NC_003444: capsid protease; GJE12_08075; phage(gi19548994)          1.43e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
1686399..1686542                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE12_08080; phage(gi23505467)     3.76e-28            SalmonellaentericasubspentericaserovarTyphimuriumWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1686529..1687770                   PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE12_08085; phage(gi23505468)           4.38e-63            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
1687773..1688300                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE12_08090; phage(gi100034)     6.18e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
1688678..1689121                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; GJE12_08095; phage(gi971758532)     2.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(1689175..1691004)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; GJE12_08100; phage(gi255252697)     3.17e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(1691352..1691642)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; GJE12_08105; phage(gi46402108)                  3.33e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
1691670..1692173                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; GJE12_08110; phage(gi100082)      1.50e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM

#### region 3 ####
1929432..1929444                   attL                                                                                 N/A                 TATGCAGGAAAAT
complement(1937263..1937730)       PROPHAGE_Salmon_LT2: integrase; GJE12_09270; phage(gi16766072)                       5.15e-46            SalmonellaentericasubspentericaserovarTyphimuriumMGKLGGEMKALAKHYGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQ
complement(1938205..1938678)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; GJE12_09275; phage(gi100007)     1.32e-52            SalmonellaentericasubspentericaserovarTyphimuriumMALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
complement(1938842..1938917)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
1938842..1938919                   attL                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(1939326..1939616)       PROPHAGE_Escher_Sakai: putative integrase; GJE12_09285; phage(gi15834507)            3.32e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(1939812..1939887)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
1939812..1939889                   attR                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(1939988..1940785)       DgsA anti-repressor MtfA; GJE12_09295                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
1940874..1940963                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
1940952..1940964                   attL                                                                                 N/A                 CTCTCTCCGCCAC
complement(1941077..1942066)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; GJE12_09305; phage(gi100105)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(1942068..1942310)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub assembly protein; GJE12_09310; phage(gi100106)     4.38e-51            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
complement(1942335..1942904)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; GJE12_09315; phage(gi100107)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
complement(1942908..1943489)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; GJE12_09320; phage(gi100108)     2.03e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIELFIKSPLENGLTRGEQMELARIALASLEAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVSWTTIKAIWNKGVEHFRSSTATGDN
complement(1943500..1943757)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09325; phage(gi100109)     8.08e-58            SalmonellaentericasubspentericaserovarTyphimuriumMATLTKQEKAWVKKLNKLLAECPSNRIAFATTGDCEVSLFDVTRYDEIFDEVEKGKSEFIPSAMRIGATFNECLTFPNQVESTAG
complement(1943759..1944292)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09330; phage(gi100110)     1.88e-131           SalmonellaentericasubspentericaserovarTyphimuriumMTVHTLKQCRPDQEETEYLWKLFHAAQRNDARWHGSEISIIADELSRTDLDRNQKLFLLRSWQVLVDDKGGFGRFMGAFDTYVYNMQDPDDDCVAWKPELSNLLCDGQLLDVVIDAYQSARQRIAELEARTVNLSKRSVGEVMHMSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKGE
complement(1944363..1944902)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09335; phage(gi100111)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
complement(1945039..1945866)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09340; phage(gi100112)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGTMTTTSIEDFVRYSKGYASATEKARCFIDADHMTARSVFNIGTLDNPGHADNAASITLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGNTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDMLINKFDGESVETFIGNFKA
complement(1945924..1946295)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09345; phage(gi100113)     4.84e-85            SalmonellaentericasubspentericaserovarTyphimuriumMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLLSIKGTTDGKLKAAQ
1946835..1947059                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09350; phage(gi100114)     1.54e-46            SalmonellaentericasubspentericaserovarTyphimuriumMPILETTLNSDSSNEGLAADVRALKIAVALLVTRIPLEHKPYAVCDALNNSGESSASELADLIKQFLDKAHNRT
complement(1947022..1947360)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09355; phage(gi100115)     7.56e-78            SalmonellaentericasubspentericaserovarTyphimuriumMNNYYTCSFCGANEMDAKKIIAKGGNADPAICSECVVRCVGVLANTSTTESTRSTEMNNAASIEFWQLITALSEMAISSLKAAQEMGDEESACLIAKKLSVKFDYAPCRETV
complement(1947566..1948261)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09360; phage(gi100116)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
1948359..1948583                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09365; phage(gi100117)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
1948612..1949166                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09370; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
1949163..1950305                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09375; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDNSCRNLTAGFVMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGIGVLELLSATNDAPASFLLSQLGYIQIMVGWVGAPKGAPVSDNAGYANPAQFTTSEIGVSGGGVTSKLSEAAIMATVPTLAQPEISVINGQAVTSSLAVADYFTKRHDDVLKKIRALDCSPEFTARNFAVSDYTDASGRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSKPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKVESPLAVSLYDRINDAAALASLINMTLNRSEVRGRK
1950302..1950526                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09380; phage(gi100121)     1.47e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
1950523..1951497                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09385; phage(gi100059)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSSLIQLLDRPIAYNPAFAKLKAGKVKAGPVAAVFLSQLVYWHNRMDGGWMYKTQADIASETALTRDEQETARKRLVALGVLEEARRGVPATMHYRINTERLEALLLETAKPVKKGAQEKTRLRDLQNVETPQSGLVQPRKPDCGNAANKNVETPQTSTGQPNEQACGDPTIFPTGDYTETTQEITQESKTPSCPVAAQPDPEVMITDQAIEVLTHLNQVSGSRYQKSKTSLENIRARLREGYSVADLQLVIDLKHEHWHENDEQYQYMRPETLFGPKKFESYLQSATRWDQKGRPKRADWGAKKRDVMAFGPVDTTIPEGFRG
1951494..1951967                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09390; phage(gi100059)     9.01e-73            SalmonellaentericasubspentericaserovarTyphimuriumMSLLAKVQAFIELNPGLTSNEIADAFPEYARFDVQRSASKLYRCKRVNRRLDGDVFRYYAGKDEAVILTLRQKRSGRTGSGDPMVLAKLVSLAEDLESRGLFKRASAVWLEAFSESQLTGEREAFLRQRQRCLDSCKKPVRPGEQIYLAGRFVGNVE
1951964..1952839                   PHAGE_Salmon_118970_sal3_NC_031940: thymidylate synthetase; GJE12_09395; phage(gi100061)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTSESVCIESSDVTISVDESASRSWRRPFLKWAGGKYSMLPDLYQIIPAGMRLIEPFVGGGSVFLNSDKHACFLLADVNTDLINLYQMLAVVPDTVIRHARVMFDRLNDAESYMVLREEFNAQVMDGPERAAAFLFLNRHCFNGLIRYNRNNQFNVGWGKYPSPYFPEEEIRAFTRMAHNCVFMAAGFRRTLAGEGDVVYCDPPYEPMPGTAGFTHYAAGGFTWDDHIALAECCVAAHQRGARVVIGNSTAPRVIDLYSQHGFEIRYISARRSISSKGSTRETAKDLVAIL
1952848..1953237                   PHAGE_Salmon_118970_sal3_NC_031940: ribonucleotide reductase A subunit; GJE12_09400; phage(gi100062)     3.18e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKLTLPFPPSVNTYWRAPNKGPLKGRHMVSASGRKYQSEACAAVIEQLRRLPKPSTAPAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAA
1953254..1954114                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09405; phage(gi100126)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGDQKYRPKYWLDNKQTRELIEQLFTEGGIPSSEQNQSVSFFQGGSDTRSLVRAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1954122..1955111                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09410; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGVVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLESIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLADVLPESAARKALRMPKAIVQSATRESEIVPSVPATSLVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1955125..1955877                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09415; phage(gi100128)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLEALPKYYSPKSPKLSDDAPATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKVGVQDPQFAIEGLLNHAMALDNPTLNKLSEETRLQIIPYLVNFAFADYSRSAASKARCEHCAGTGFHNVLREVVKHSRSGVSVIKEEWGKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHGTPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQWYKGYADIIDKLVTKCWQEEAYAEAQLRKVTR
1956028..1956285                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09420; phage(gi100129)     1.08e-56            SalmonellaentericasubspentericaserovarTyphimuriumMQGEKQQPYFFNPGMTVEQLEDWLEQQKLHLSRYNRLVKEKAELEERLSDISVEIERMSAGGFNGKLSFPRESSPPLRNNQQGSV
1956431..1956817                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09425; phage(gi100130)     6.27e-82            SalmonellaentericasubspentericaserovarTyphimuriumMSDPISGTGLAGGALTGASVYGLLTGTDYGVVFGAFAGAVFYIATAADLSASRRLAYFIVSYIAGILCSGLVGSKLANLTGYSDKPLDAIGAVIVSALAVKILTFLNNQDIGSLVALITRRGGSGGAK
1956804..1957085                   PHAGE_Entero_mEp390_NC_019721: putative holin; GJE12_09430; phage(gi428782713)       2.26e-26            SalmonellaentericasubspentericaserovarTyphimuriumMELNDPTATINALLCACVVITLMFYRRGDSRHRPWVSRLAWLITVTYSAVPLAYLCGIYPHSSWPIIVANTIFLSVLVAVRGNVARLVDHLRH
1957085..1957699                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09435; phage(gi100131)     1.54e-150           SalmonellaentericasubspentericaserovarTyphimuriumMNQQLFQKAAGISAGQAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
1957696..1958088                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09440; phage(gi100132)     1.01e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKMSYWALILTFIACVAGGLVWSANHYHGKFLEEQKRADAAEQRADSTEAITENVLRTMAITNIIQEANQHAKQQIALESQRTQEDIKVAVADDDCASRPVPDVAADRLRKYADSIRAGSNDAVTGEPAR
1958551..1958883                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09445; phage(gi100133)     5.28e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPVNIDPEQLNDEREQVIAKWLFKDVDLISQQIELGEENVKRFDELLSIFDCCQSSWFATEHLFDNTELEKVWHEFESNFNKYINGGESKDLLMKMLDKLISSRFVFESR
1958934..1959284                   PHAGE_Entero_SfI_NC_027339: HNH endonuclease; GJE12_09450; phage(gi849250284)        1.27e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
1959410..1959904                   PHAGE_Salmon_118970_sal3_NC_031940: co-chaperonin for GroEL; GJE12_09455; phage(gi100075)     6.48e-106           SalmonellaentericasubspentericaserovarTyphimuriumMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
1959901..1961634                   PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; GJE12_09460; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMPITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVAMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYANMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
1961646..1961828                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09465; phage(gi100077)     1.17e-33            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
1961828..1963069                   PHAGE_Shigel_SfIV_NC_022749: portal protein; GJE12_09470; phage(gi557307529)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVYYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
1963047..1963697                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09475; phage(gi100080)     1.30e-151           SalmonellaentericasubspentericaserovarTyphimuriumMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVVSGAFAASLRAWSDRKALPALLWQHRMDEPVGVYTEMKEDDVGLFVRGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEVFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGKIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNALKNLNF
1963712..1964917                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09480; phage(gi100081)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQDLQQKFDDFKAKNDKRVDAIEQEKGKLAGQVETLNGKLSELESLKSDLEKELLELKRPAGGAQNKVATEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRPQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTDESDKARAFGKLQHIVSGEATTVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFTIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
1964967..1965167                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09485; phage(gi100082)     4.15e-31            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGMRVEVIRAGEYDDGALPARVQEIALQAGLADRGTSAKSSKATKEKKATTSKEG
1965170..1965493                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09490; phage(gi100083)     2.64e-68            SalmonellaentericasubspentericaserovarTyphimuriumMLLTMEEIKAQLRLDEDFDTDDRHLQLLACAAQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
1965490..1965894                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09495; phage(gi100084)     1.84e-69            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYILPDPGELDKRIAIRLRVDEPNDDFGVSPSYTEEICTWAKMAQPGAAAYQGSVQTEKIVTHYFTIRWRRNITADHEVFCDGQVYRIRRIRDLNSKRRFLLLECEELGTERAEGYAEQSVFTR
1965866..1966378                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09500; phage(gi100085)     6.73e-106           SalmonellaentericasubspentericaserovarTyphimuriumMQNKAFLHVDFEQPETLVFNRARLRRAFVCIGQVHMRDARRLVMKRGRSGPGDNPSYRTGKLARSIGYYVPRASSRRPGLMVKIAPNQKNGEGNRPISGAFYPVFLFYGVRRGAKRKKGHHRGASGGSGWKIAPRNNYMTEVLERRRSWTRYILSRELRKSLRPQRRKKK
1966375..1966932                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09505; phage(gi100086)     4.57e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRARCPLFENRVGGAAQFKAIPEAGKLRLPAAYVVPSEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQLIWKALLGWEPDPQAHEIQYAGGMLLDLNRHELYYQFDFTAKYEITEEDSRQQEDLDVLPDLKTLSIDVDFIEPGTGPDGNIEHHTGITLP
1966954..1967118                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09510; phage(gi100087)     1.14e-29            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPVKGRSVPDPAHGDLLPEEGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
1967108..1968604                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09515; phage(gi100088)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDVVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNTMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
1968604..1968960                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09520; phage(gi100089)     1.20e-82            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKSFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
1968957..1969283                   PHAGE_Salmon_118970_sal3_NC_031940: DNA ligase; GJE12_09525; phage(gi100090)         1.48e-73            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
1969368..1971293                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09530; phage(gi100091)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFKLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGKSATKSQKRAMAFLKLNPAQLAADMQKDSRAAMLKVLDSLAKVPKAKQASVMNALFGKESLGAIAPLLTNLDLLRTNFNRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEIDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAAPPSTQRSELKVTFENAPQGMRVLDIPKTGNPLMNITHDVGYSPFSNK
1971310..1971759                   hypothetical protein; GJE12_09535                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKILVAACVMVLSFPVFAKKTPTTDFVNEIEAAINSTGEVSTSLDITCPAQSASGRVLVTHADYTYGMSKGVFVFKNTDDTPAEMKSIIPIHPNNDIMSDIISGWDFGFIIRGGQFFVKVMKNGEVKAGINKNGTSGVTEVKCKVTKP
1971819..1973159                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09540; phage(gi100092)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVVGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPSAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIVTVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
1973156..1974214                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09545; phage(gi100093)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDAVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGKNLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKTKKKVSEEADF
1974214..1974747                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09550; phage(gi100094)     5.75e-128           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
1974752..1975165                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09555; phage(gi100095)     4.62e-95            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRNDATASLDLLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSELNG
1975158..1976237                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09560; phage(gi100096)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHASIKRCPRKNAVSAKGFARWDGIAGRPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGADTEELETWRARVMERYYWIPQGGADPDYVIWAKEVAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
1976240..1976827                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09565; phage(gi100097)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1976814..1978376                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09570; phage(gi100098)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGSLGIGTDNALGGNSIVLGDNDTGFKQDGDGVLGIYANNARVGYIDNSGLHMSVDVLTNGGIRAGDGKRLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGIAYAPLQKRVGNQWYTVQGGTA
1978346..1978951                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09575; phage(gi100099)     1.39e-140           SalmonellaentericasubspentericaserovarTyphimuriumMVYRTRGNGIMKKYQDIKNFRLIDAPVNRGKTQSEINIGAFFLESEDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYAVSMLWPVNMSVAEIAAADCPDDCRGDGMWLYQDGKVAQRVHSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLDAWELYSVMVNRVDTASPDWPDVPVSQ
complement(1979065..1979298)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_09580; phage(gi100100)     1.16e-49            SalmonellaentericasubspentericaserovarTyphimuriumMKSKDTLKWFPSQLPKVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKAKAWLDNKELLQTAVSVLKENQDANGKI
complement(1979373..1979486)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; GJE12_09585; phage(gi100101)     5.29e-18            SalmonellaentericasubspentericaserovarTyphimuriumMDNTLIIISLLIIFSIFSYAVIKVGIGISNNPDKTDE
complement(1979534..1979947)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate distal hub subunit; GJE12_09590; phage(gi100102)     2.23e-97            SalmonellaentericasubspentericaserovarTyphimuriumMKSSITLSSLLVLTVIITGCSSGKSKDDYSQVDGIYFWGQDISAFQPCHTRQIYWLNGEKTTLRSLKKHHSTNKNVYASLIVHNDGYQDKGSSGTYDETLMLEKIISTDNSKNHADCLNFIIPSKKHKVTSKNELSR
complement(1979944..1980156)       PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; GJE12_09595; phage(gi100103)     7.46e-42            SalmonellaentericasubspentericaserovarTyphimuriumMNTLDISSYPPNLLSDIEIIYGKALLQLILESKKINSENLISQLKHEQKEQQWLEDKEPLSTALKILDKS
1980488..1980631                   PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; GJE12_09600; phage(gi966201576)     1.77e-18            SalmonellaentericasubspentericaserovarTyphimuriumQKSQDPGIATDDEKAQLDEWKKYRVLVNRVDTSNPDWSEKPASSDYL
1981036..1981048                   attR                                                                                 N/A                 CTCTCTCCGCCAC
1981350..1981511                   hypothetical protein; GJE12_09605                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
1981638..1982057                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GJE12_09610; phage(gi100117)     5.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
1982060..1983328                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; GJE12_09615; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
1983783..1983995                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE12_09620; phage(gi13095918)                   1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
1987460..1987472                   attR                                                                                 N/A                 TATGCAGGAAAAT

#### region 4 ####
complement(2091450..2092148)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; GJE12_10210; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2092172..2092828)       carbon-nitrogen hydrolase family protein; GJE12_10215                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2092936..2093166)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; GJE12_10220; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2093304..2093678                   CopC domain-containing protein YobA; GJE12_10225                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2093679..2094554                   copper homeostasis membrane protein CopD; GJE12_10230                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2094571..2094924                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; GJE12_10235; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
2095262..2095291                   attL                                                                                 N/A                 ATCCAAATCCAGTTTAACATTTCTTTTACA
complement(2095298..2096152)       PHAGE_Entero_HK022_NC_002166: integrase; GJE12_10240; phage(gi9634144)               1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(2096212..2096706)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; GJE12_10245; phage(gi985761253)     8.72e-21            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2096896..2097126                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; GJE12_10250; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2097180..2097713                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; GJE12_10255; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2097970..2098137)       lytic enzyme; GJE12_10260                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2098202..2098390)       hypothetical protein; GJE12_10265                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2098445..2098705                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; GJE12_10270; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2098863..2099744                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; GJE12_10275; phage(gi169257205)     1.04e-89            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2099841..2100041)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE12_10280; phage(gi169257211)     3.94e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2100611..2100736                   arsenic transporter; GJE12_10285                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2101411..2101557                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE12_10290; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarTyphimuriumIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2101884..2102498)       disulfide bond formation protein B; GJE12_10295                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(2102508..2102666)       hypothetical protein; GJE12_10300                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2102799..2103713)       EamA family transporter; GJE12_10305                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2104990..2105019                   attR                                                                                 N/A                 ATCCAAATCCAGTTTAACATTTCTTTTACA
complement(2105026..2105394)       PHAGE_Entero_HK022_NC_002166: integrase; GJE12_10310; phage(gi9634144)               6.28e-24            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML

#### region 5 ####
2918473..2918487                   attL                                                                                 N/A                 GCTACATTTTTATAA
2918793..2918984                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; GJE12_14425; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2919255..2919941                   virulence protein; GJE12_14430                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
2919926..2920225                   hypothetical protein; GJE12_14435                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGSEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
2920294..2920920                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; GJE12_14440; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(2921052..2921470)       PHAGE_Stx2_c_1717_NC_011357: transposase; GJE12_14445; phage(gi209447153)            1.08e-05            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTGAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(2921568..2922536)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE12_14450; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2922682..2923008                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE12_14455; phage(gi100034)     5.49e-23            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(2923012..2923593)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; GJE12_14460; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(2923593..2926031)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE12_14465; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNVLRLTGTGDGEILIGWSGVNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAPIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2926085..2926327)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14470; phage(gi169257319)     7.64e-54            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2926366..2929716)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; GJE12_14475; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
complement(2929788..2930492)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE12_14480; phage(gi169257316)     9.79e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQTDNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
complement(2930390..2931127)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE12_14485; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
complement(2931137..2931832)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE12_14490; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
2931922..2932455                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; GJE12_14495; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(2932572..2933069)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; GJE12_14500; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(2933169..2933501)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE12_14505; phage(gi169257311)     3.22e-77            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPPLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
complement(2933498..2933947)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE12_14510; phage(gi169257310)     4.94e-95            SalmonellaentericasubspentericaserovarTyphimuriumGSTVLGMFGFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
complement(2933940..2934650)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; GJE12_14515; phage(gi169257235)     2.07e-162           SalmonellaentericasubspentericaserovarTyphimuriumMTSGERQANNANRAITNGLIALHIPVPLTAVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGNDRIRVVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRNNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVSCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKAKGTCQIDKAANESAHFMRFH
complement(2934622..2935167)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; GJE12_14520; phage(gi169257236)     2.06e-89            SalmonellaentericasubspentericaserovarTyphimuriumMKVNKKRLAEFFNVDPRTIERWQSQGMPLASGGGKGVEAVFDSAAVIEWYAERDASIENEKLRKEVDDLRAAAESDLVPGTIDYERYRLTRAQADAQELKNAERKSEVMDIELFTYILQRIAQEIVGILSRLPLTLQRKYPDLTTEHIDAIKTEIAKASDKAATIADVEKWVDDFRRTSGE
complement(2935636..2936082)       PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; GJE12_14525; phage(gi966201480)     6.43e-92            SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCSVPTRTETASTRRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYVRTQCE
complement(2936100..2936552)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; GJE12_14530; phage(gi169257296)     2.33e-106           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(2936536..2936865)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; GJE12_14535; phage(gi169257295)     7.80e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGAIRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2937141..2937827                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; GJE12_14540; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2938188..2938637                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14545; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2938773..2938898)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14550; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2939093..2939782)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; GJE12_14555; phage(gi169257244)     3.64e-126           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITRWAWCEFRQQLAGRKMAGKTVERLKKLIWLAAQDVREGLAGRYVYQQQELASLCGVKPDNWSHNYADYWRAMSNIFKRLDTESLLCLVKTRSQQKATFSQQGIAKVN
complement(2939779..2939919)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14560; phage(gi169257289)     2.98e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
complement(2939916..2940527)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; GJE12_14565; phage(gi169257288)                 4.16e-144           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAHEAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRTTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(2940736..2941338)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14570; phage(gi169257286)     2.22e-145           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNEGALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(2941423..2941644)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; GJE12_14575; phage(gi169257285)     2.26e-30            SalmonellaentericasubspentericaserovarTyphimuriumMADIVQSDLADNFRVTITNGRGLEVLSFRIRAEERYIITSRDGAVTPRKLSRDDLYWSKETIMEVVREMASKN
complement(2941754..2941987)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; GJE12_14580; phage(gi169257284)     3.91e-30            SalmonellaentericasubspentericaserovarTyphimuriumMKVELTIDRTKKLPDGAEAALEKELLKRLNNQYEDCSLVIRRAGSDGLNVYGAAKDDKKQIEMILLETRESADDWFY
2942579..2943175                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; GJE12_14585; phage(gi90592714)     1.57e-05            SalmonellaentericasubspentericaserovarTyphimuriumMKKRTGLKYALYILSLWLLFVSLFIMSYDKNLFVSISTYLDSKDTGTLLSSITPKNIVFISSFAMIVAGVLIFLYLLLSFNSGWSVACTVSDVRNESHEHLEFLTTYVMPLVFTDVNSKRTMLNLLIMIVAIGMIYVKTNRFYSNPSLALLGFRIFKANINDRGTKEFVIICHGEIDNNSRIKYIKLDNNTCLAKITQ
2943187..2944164                   DUF4868 domain-containing protein; GJE12_14590                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFTAIDNILNSTQLSGEAYFVAEHQGQLDIFRVALEPGAEQKLTQSFSRSLKRDVVDPNTGQNTLPLVSSLLSRDKQVHEYDHQVINYLPPALAKMADVLSFGVNNTPTDFDFAQQNLSTVKGIVYYLCDGQGNGVVVYQHKYPIALHKKTKLSYFSANGRTLDEVTHDSIDINGNVDFFYFDNKYYALNINLLERAYGLEQVINNLAANATPHIIALNILDVSNHPNPADIFNDMHRNRNFMRRLATTANSPLLQNGTINIANIQTLIQNFPILGRNIIINQAGLIELSSKKQKLYFIRLLNNEASFTALNLEPFLAVGKDSAA
complement(2944219..2944476)       PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; GJE12_14595; phage(gi100124)     1.62e-08            SalmonellaentericasubspentericaserovarTyphimuriumMDQLLQYATNRIIELESLLLVDIQETVWPTEVKMVFSQVDNAGDLPAHHQRRLLHHINRMWLEKMPESDTFLAASEPGPIAFAFR
complement(2944476..2945120)       PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; GJE12_14600; phage(gi423262432)     2.62e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTTITREQQKQILIDTANHVISRDNTSPYSENLRELARIALAQLIAEPVERDGADADPVVFTDERNLHHIARGRETSLIWGKQNQEVGDIPLYRHAQPAPVVPEEIPKGLADQIVSLLAHNIGDKFLAQKIWNACRAAMLQGNQAPVKQPSSNSENVPVISDGWVMVPVELTDDMIAAAMNCDDVLFNRDESFCVQFGNIYAAMIAAAPQQEAE
complement(2945124..2945432)       PHAGE_Caulob_karma_NC_019410: hypothetical protein; GJE12_14605; phage(gi414089390)     1.27e-06            SalmonellaentericasubspentericaserovarTyphimuriumMKTKKYDERKDLDLWFGLSYAAFLVMPRVAMMQMPEEWREKMAELLNQYDETIDTAAFGVKGCRVNALTGDGKLMKMPAELLNYRHPQPETVEALLLSKGEG
complement(2945436..2945894)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE12_14610; phage(gi169257282)     1.63e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPRTMLALLDENIQLQRGKDAIEAVALALRDDMRDAREKLEAAEHRIAEHRKVLNSIAAVARRYLPDYDEHPEIQAADELLESAAGIGVKGE
complement(2945891..2946238)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14615; phage(gi169257281)     2.62e-76            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTHSERTIILERIIGLVKEQWRITTNDVVAMFGVHRTTAEKYLQIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
complement(2946249..2946998)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; GJE12_14620; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
complement(2947001..2947984)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; GJE12_14625; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVLETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRVSPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
complement(2948069..2948389)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; GJE12_14630; phage(gi169257278)     1.49e-72            SalmonellaentericasubspentericaserovarTyphimuriumMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(2948424..2948651)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; GJE12_14635; phage(gi169257277)     5.71e-17            SalmonellaentericasubspentericaserovarTyphimuriumMNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD
2948757..2949191                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; GJE12_14640; phage(gi169257276)     1.25e-42            SalmonellaentericasubspentericaserovarTyphimuriumMMNMKTEQHENFVRRLQLIQDQTGWNLSEIARRVMVSPQAVQQWAKGDTTPRGERLKRLAAVTGKPEHWFFMPLDANEPSNSLSEIPTSSSRDMLDDKEKALLALFNQMPEAEKNRLIVHAKATLQELDLLKDDVLSIIKNIRE
2949488..2949619                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14645; phage(gi169257274)     1.01e-22            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNILLYRNGSQLARKEKEYCSRQCA
2949668..2950018                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14650; phage(gi169257273)     7.04e-45            SalmonellaentericasubspentericaserovarTyphimuriumMKDSPLIWRGFLHPEFKTGELMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKIDYSEKFYQTIH
2950145..2953345                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; GJE12_14655; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPSVTLPSSEAAAAARQHIVDGVDTETGEVLEDHNENFGNESNSPSPAKAPAPELTVVATMPLRHRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKRMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYAYAPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPAGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELYEARKNIPPKSPVDVGKQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
2953308..2954465                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE12_14660; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
2954508..2954747                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE12_14665; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2954788..2955036                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; GJE12_14670; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2955081..2956373                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; GJE12_14675; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMIAAQ
2956408..2956422                   attR                                                                                 N/A                 GCTACATTTTTATAA
2956568..2957770                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; GJE12_14680; phage(gi100242)     2.14e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 6 ####
3027259..3028514                   PROPHAGE_Escher_CFT073: transposase insF; GJE12_14955; phage(gi26249410)             1.83e-39            SalmonellaentericasubspentericaserovarTyphimuriumMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
complement(3028977..3029435)       PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; GJE12_14960; phage(gi300116744)      1.70e-18            SalmonellaentericasubspentericaserovarTyphimuriumMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(3029627..3031903)       PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; GJE12_14965; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
complement(3031934..3032254)       PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; GJE12_14970; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumMGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
3032578..3032799                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE12_14975; phage(gi13095918)                   1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
complement(3032929..3034875)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; GJE12_14980; phage(gi371496158)      2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE

#### region 7 ####
3649072..3649083                   attL                                                                                 N/A                 CAGTTATTGAGA
complement(3654561..3656912)       PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594: putative integrase; GJE12_17970; phage(gi764160521)     1.21e-44            SalmonellaentericasubspentericaserovarTyphimuriumMRNIDLIRQVISASENNWPHVLGCLNINVPDSPRRHAPCPACGGKDRFRFDDNGRGSFICNQCGAGDGLDLIKRVNNCDTTEAALLAADVLGIDYRTTETPEATSQKREQLETERQRREQERLKRAEKDEQQRRDTFSRQFDDMRRKAVNGKSDYLVAKGVGDFTFPVLPDGSLLLALVDKSGAVTAAQTITPHGEKRLLTGSAKRGAYHAINAQKRPHSIIIAEGVATALSCHLIRPDAMTVAAIDAGNLLPVAEVMRRTYPQAQIIIAADNDHQQGDSESGGINTGKDAAERAAISVAGRVSLPPTDYKADWNDYHQQHGLAAATAAFKDSMYQPRGKGAQVKNHKQSVGALNEISSGEVLSDDEIAVLEEINRTFTHVTIGGKHKVVSLKPSQTGGVSHVFEDLSQFQHYFHHKPRVARKLAGSAWLSWSGKNYKPGGVGFYPVPDKCPDDVFNLYEGLALEPIEGDCTVYLNHLLQVVCAGNEEACQYLIQWMAHIIQKPDEKPSVAIVMKSVPGTGKGTTVKPLLQILGQYAAHINGAGHISGRFNSILANKLLVFADEVTIHKPSEADRLKAIISEPTFNLERKGIDAEPMPNFARLIFASNSTQVLQAGIRERRYLVLEPSPEKAQSREYFDRLYSWLNDGGAAKLLWHLKGVDLSGFDPQRAPQTDALREEILLGLSGVELFLYGELINEPPFNGEVRLFAKDMVSRFVAWSLERGEKLKEPAARSLLGKSLAQMGLVKHGRPDRGNGVFYELPEVGVLQAAFARLIGMGGYDVF
complement(3656925..3657527)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; GJE12_17975; phage(gi18249870)     1.32e-27            SalmonellaentericasubspentericaserovarTyphimuriumMNNFLTFHAEATPDGVNIMYRSNDGMTERVEAVSYIDAVNRLDAGDYDDKPDEGMFIHLAIASGGNQGYFDYTSQHHVIMWRWLIATAFINEMRKENGTVSIIDDSGNHSVVSVYSNGIVAMPLYPVAERLAMANNIEGAMIEKYGVDVGTKNAIIFYSNMFDVEQGTLTSFGREVLADLHNSFIAELNENGIPEAPVTH
complement(3657520..3657741)       hypothetical protein; GJE12_17980                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLLNGVPEAIQEADELLGKYELQNHSGEAKHE
complement(3657738..3658001)       nicotinic acetylcholine receptor subunit beta; GJE12_17985                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNINLIYRHPCELEIESLLGREEPYPDTFTPADCATERLTRARTGLVHVMNEIVPSVGGEQATVINSWLQKVTSLIDIGLIDVESAK
complement(3657998..3658192)       hypothetical protein; GJE12_17990                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNNSINTPRLTSALQLIEQAAAVLVAVSLSAEEMDAADVVDAIKACSSLVNDARAELVILGGEK
complement(3658185..3659213)       PHAGE_Entero_phiP27_NC_003356: hypothetical protein; GJE12_17995; phage(gi18249880)     1.36e-17            SalmonellaentericasubspentericaserovarTyphimuriumMLTVQKKTFSLAGMSPKSSNMTAKSGINTADTSKVYHLLVVGADALTMSEITVDGVSVEKVSGCAREFLVVDHLFCSCSDSTKTFVHVRDVNEMSAMYCASGASNSEFSESIKKSLPLCGNTVYGYKAPHKTGAGIRTPQAIEAIHDAPASFFVSAHTHTLSMVGCMGLTSVRLVSLIASSPNPVQSTASELRTSGGGYKPSIKEAATCWLLPLPKNRNLSGLSPQFAAIARQLPPKFIILLPSLNAMLAVLWCAITSAFLLVVSAWRWHMIKTYDVHMDPLERTSQIITLTEVINDILVSNSPSRDERLKALLAILDLAVRDVHFLLEGGQMPVKTGATNE
complement(3659207..3659389)       DUF4222 domain-containing protein; GJE12_18000                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFKPTGTPQPQKRYKDAHGALVTVESVSHNRVTFYRDGYQSPCVQPLARFMKEFAEVNKC
complement(3659382..3660215)       PHAGE_Escher_TL_2011c_NC_019442: putative antirepressor; GJE12_18005; phage(gi418487055)     5.87e-28            SalmonellaentericasubspentericaserovarTyphimuriumMNIEKSRLISEAAPHLNASLGTINGNEFAAIVPVIPGHIGGRETNIVSAKALHKALGVGKDFSTWITDRISEYDFTIGHDYSVHKTISPNLGKIPNGAAYSKIKQSGRPGKDYLLSVGMAKELAMIERNDQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARLSAANNFKPMCDALNMARAEMGKATQQHHYTNESNMISRIVLGGLTAKQWARINGYSGEPRDHMNAEQLEHLSYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEAVNV
complement(3660228..3660659)       hypothetical protein; GJE12_18010                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMEKKNRPLQAANSDIRVSDVTPLTKSPQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA
complement(3660659..3660862)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; GJE12_18015; phage(gi9627517)     5.82e-08            SalmonellaentericasubspentericaserovarTyphimuriumMANYNSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCILESRDEVA
3661235..3661246                   attL                                                                                 N/A                 TTTATCAATCTA
complement(3661291..3662505)       PROPHAGE_Escher_CFT073: putative prophage integrase; GJE12_18020; phage(gi26250313)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPASRMKMRRPHIVPLSEQALSLIGKIREITGNYPLMFPGRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYMDSLEHDGNVVHMVFEKHA
3667060..3667071                   attR                                                                                 N/A                 TTTATCAATCTA
3672598..3672609                   attR                                                                                 N/A                 CAGTTATTGAGA

#### region 8 ####
4500143..4500157                   attL                                                                                 N/A                 CTTATCCGGCCTACA
complement(4501324..4502739)       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GJE12_21880; phage(gi100087)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAGNKPFNKPQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVRDMIAVAHEIADAGYDPQGRNSDELLDLAESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
4502804..4503787                   NADPH:quinone reductase; GJE12_21885                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMATRIEFHKHGGPEVLQTVEFTPAEPAEHEIQVENKAIGINFIDTYIRSGLYPPPSLPAGLGTEAAGVVSKVGNGVEHIRVGDRVVYAQSTLGAYSSVHNVTADKAAILPDAISFEQAAASFLKGLTVFYLLRKTYEVKPDEPFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRALDAGAWQVINYREESIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYATRPSLQGYITTREELTEASNELFSLIASGVIKVDVAENQRYALKDARRAHEVLESRATQGSSLLIP
complement(4503962..4504204)       envelope stress response protein PspG; GJE12_21890                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLELLFVLGFFLMLMVTGVSLLGILAALVVATAVMFLGGMFALMIKLLPWLLLAVAVVWVIKAVKTPKIPQYQRNNRRFY
complement(4504372..4505409)       tRNA dihydrouridine(20/20a) synthase DusA; GJE12_21895                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMHDNHETKKINQTSVMPEKTGVYWNSRFSIAPMLDWTDRHCRYFLRLLSRQTQLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKEHLRHMDGVMVGREAYQNPGILAAVDREIFGADTTDADPVAVVRAMYPYIERELSQGAYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADVAVLEQALKLVADKR
4505498..4506595                   PHAGE_Entero_mEp460_NC_019716: integrase; GJE12_21900; phage(gi428782338)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAYYNIEKRLKSDGTPRYRCNVIIKEKGVITYRESKTFPKHAHAKTWGTQKVMELDLYGIPSSNAVDGLTVRDLLHKYLNDPNAGGKAGRTKRYVLELLMDSDISAIKLSELTENDVIEHCRLRNNAGAGPATVSHDVSYLGSVLDAAKPVYGINYTSNPAKAARPYLLKLGLIGKSNRRNRRPASDELDMLIEGLQQRSTHKCSKIPFVDILKFSVWSCMRIGEVCRLRWEDLDQEQKSILVRDRKDPRKKEGNHMKVALLGEAWDIVQRQPKKSEFIFPYNSTSVTAGFQRVRSKLGIKDLRYHDLRREGASRLFEAGFSIEEVAQVTGHRSLNVLWQVYTELYPKSLHNRFEELQRSRNKTS
4506657..4506905                   PHAGE_Entero_mEp460_NC_019716: DinI-like protein; GJE12_21905; phage(gi428782337)     7.10e-53            SalmonellaentericasubspentericaserovarTyphimuriumMRIEICIAKEKMTKMPTSAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH
complement(4507049..4507612)       PHAGE_Entero_phi80_NC_021190: DNA invertase, resolvase, site-specific recombinase Pin; GJE12_21910; phage(gi824479608)     7.83e-102           SalmonellaentericasubspentericaserovarTyphimuriumMIYGYVRVSTNHQDTELQRLALESAGCERIYEEYASGRTANRPVLKELITVMKSGDELIVWKLDRIGRNVLHALLMFQNLHEKGVNFRSITDGVDLKTASGRYNFRNILSAAQYESDLNSERTLAGLAIARSKGRIGGRRPKFSDEQWQQMGALIAAGKSRRYVARIYNVGLSTLYKRFPVTGIQTK
4507683..4507865                   PHAGE_Entero_IME08_NC_014260: gp37 long tail fiber distal subunit; GJE12_21915; phage(gi299779191)     2.93e-11            SalmonellaentericasubspentericaserovarTyphimuriumVGLGETINLAAGAVQKTGDEMNGKLTLPQTSSFGVNTNNTLGGSSIAIGDNDTGLKGNGDG
4507938..4508666                   PHAGE_Kluyve_Kvp1_NC_011534: tail fiber protein; GJE12_21920; phage(gi212671420)     5.54e-10            SalmonellaentericasubspentericaserovarTyphimuriumMLTKNFQALVDNNWPEGAGGFSGQLSSEAPFSVPMVHRQNNDNNFFPLLKGKVSLESGYPVAASFGILTSGNTNFPQIAIHAKTDFDVNDKIWVFDVATGEFRAPGRITATEILLSGKSRVAPDGNLYGDVWGGWLNDFLNNNYNRKNTASLGDYGWVRDESTGFIMQWGTLGSSNGTYNFPREFPASCFAVFVTNNNQQGGAVDNAFGYPVSKSQFFAATKDSSSSNHINNYPVAWFAIGR
4508668..4509075                   PHAGE_Salmon_SJ46_NC_031129: replication and recombination DNA helicase; GJE12_21925; phage(gi100033)     8.52e-97            SalmonellaentericasubspentericaserovarTyphimuriumMSDYYYSFKEKGFFYKPDTESGDCPTDLIPLTDEHYHELMQGQVDGKYIEHRKGGPVLVEHREYTPEELVAQAESRKAELLAGAESVIAPLARAVKLKIATDEEIKRLDAWELYSVLVNRVDTSNPDWPDKPASQ
complement(4509079..4509696)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE12_21930; phage(gi100034)     1.04e-143           SalmonellaentericasubspentericaserovarTyphimuriumMVYRTRGNGIMKKYQNIKNFRLTDAPVNRGKTQAEINIGAYFLKSDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGSWLYRDGKVLPVPVDYQAKAETTRQKLLDAANSAIADWRTELALGEISDDDKASLTKWMAYIRALKTLDLSGVKDSATFTEIRWPELPQ
complement(4509666..4511198)       PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE12_21935; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVKTALENLGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSIGTDNALGGNSIVLGDNDTGFKQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWQLYSQRNPDGSVLFTVNGDITANVLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV
complement(4511202..4511786)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21940; phage(gi19548988)             7.86e-143           SalmonellaentericasubspentericaserovarTyphimuriumMDVTNDDYIRLLSALLPPGPAWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
complement(4511777..4512835)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21945; phage(gi19549009)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSEFQRPTLAENISMLRNDLFARLDVSDTLRRMDEDVRAKVYAAALHTVYGYIDYLAMNMLPDLCDESWLARHAAMKRCPRKEATAASGYMRWEGVSDGLKVTAGSVIQRDDLVQYTATADATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHWMGTGTVGVMIASSDLINPIPEESTETAARQHIEPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAVITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPADNISIAKNELAVLGTISWT
complement(4512822..4513247)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21950; phage(gi19549008)             1.54e-98            SalmonellaentericasubspentericaserovarTyphimuriumMELWLTVNGKRTCASAPLDPLTRAVVISLFTWRRAEPDDNADVPMGWWGDTWPAVQNDRYGSRLWLLQRSKLTNQLVQTVRGYIRECLQWMIDDGVVSRIDLDIRRTGINELGNSITLWRRDGPVMISFDDLWSAITHGGQ
complement(4513247..4513795)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21955; phage(gi19549007)             1.35e-130           SalmonellaentericasubspentericaserovarTyphimuriumMRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTSRANSGAEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQGQSVTLTREGLVVDGAGKTITFRNSPKARFEMDLEVTGQVKDLCDSGGTTMSAMRLAYNGHRHRENGQGSNTDKPDKAMEA
complement(4513795..4514874)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21960; phage(gi19549006)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLQPRIKNGSKVEVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQALAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQQQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIARYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPPDAYLPEPEAPGARKKKKARVQEDPF
complement(4514871..4516199)       PHAGE_Entero_SfV_NC_003444: tail/DNA circulation protein; GJE12_21965; phage(gi19549005)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTWKDRLQDASFRGVPFKVEEESAGTGRRVETHEYPNRDKPYTEDLGKVTFRPSITAYVVGDDCFDQRDRLIDALNKPGPGTLVHPTYGELKVCVDGEVRVSTSKSEGRIVRFDLKFVEAGELSYPTSGAATAQTLMSSCSALDDCISDSFSGFSIDGVADFVQNDVIGNASIMLGYVSDAMKVVDSAVSDAARLLQGDISVLLPPPSSGKNFVEQVQKMWRTGKRLYGNASDLVTMIKTLSGVSLGSDLQPRGVWKTDSKTTATATQQRNVVASTLRTTAISEAAYAVTRLPAPTTSAVMQNSAVGQATTPAQSTGWPSVTHPALNNAPAVKNTVDLPTWEELTDIRDTLNTAIDKELSRTTSDALFLALRRVKADLNADINTRLEQSARIIQRTPDEVLPALVLAATWFDNAARDADIIRRNAITHPGFVPVIPLKVPVQ
complement(4516290..4516802)       hypothetical protein; GJE12_21970                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIEGMIMRIFVFFISALLSFNLAAEECKFSFNESELISSIGIAPVKQEIIKDEGITKRQYEFRRELSSEEMLSDDADEKYEPQFYISVYNPSCPQKVIVWFFKDNKNTMDLSNEVLAGRAFKYLTGVNESIFENKMKKFLKVQSFESFDERTDSKFIKSGDIYSIDVQLR
complement(4516884..4518716)       PHAGE_Entero_SfV_NC_003444: tail protein; GJE12_21975; phage(gi19549004)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAEFELKALITGVDRLSPALSKMQKKIRGFKRQAEEASQGGLALGGGLAAGLTLSLKSYADQENAATGLKVAMMDANGEVGKSFQDINKLAIGLGNQLPGTTADFQNMMQMLVRQGIPAENILGGVGKATAYLAVQLKKTPEAAAEFAAKMQDATGTASEDMMGLFDTIQKAFYLGVDDTNMLSFFTKTSSVLKMVNKDGLQAAQSLAPISVMMDQMGMNGESAGNALRKVIQSGLSVKKIRDVNKVMARQKLGVQLDFTDGKGSFGGLDNMFRQLAKLRKLTDVKRTGVLKAIFGDDAETLQVVNALIDKGKDGYDQIQQKMNKQASLNKRVQAQLGTLSNLWEAMTGTATNGLAAIGGAFSGDAKNITQWLGELGEKFTKFADENPRVIRGVVGLAAGLAILKLGLMGVGSAISIVSRIMSMTPIGMIATAIALAAGLIITNWDVVGPYFKKLWETIGPYFEAGWELLKKVFAWSPLGMVINNWGPVVKWFQDMWDKLKPIIEWFTDSFGDTVDAINSAQWGAGAYDAYGTGIPARGYTPYPAVDPAQSNNASDATGSNPFMINKASVPKVDGEIKVSFVNSPPGMRVMETRSSGFDVSHDVGYTRFR
complement(4518858..4519127)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_21980; phage(gi19549003)     3.80e-59            SalmonellaentericasubspentericaserovarTyphimuriumMKELELKKPIIAHGETLSVLEFDEPTGKDVRELGYPYQMNQDESVRLLAHVVSKYIVRLAKVPQSSVDQMSPADLNAAAWLVAGFFLQA
complement(4519127..4519483)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_21985; phage(gi19549002)     1.07e-84            SalmonellaentericasubspentericaserovarTyphimuriumMARIGGTCYFKIDGQQLSLTGGIEVPMNRTVNDDIIGLDGSVDRKETHRAPYVKGTFKVPKNFPVSKITSSDEMTITAELANGQVYVLSSAWLHGEANHNAEEGTVDLEFHGEEGDYQ
complement(4519483..4520979)       PHAGE_Entero_SfV_NC_003444: tail sheath protein; GJE12_21990; phage(gi19549001)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTISFNTIPSNTLVPLFYAEMDNQAANTAQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICGAGSQLARMVEAYRQTDPFGELYVIAVPESTGAAATVTLTVTGAATETGTVNVYVGRTRVQAPVTNGDNVTMIASSIQDAINAVPTLPFTASSSAGVVTLTARHKGLCGNEIPVSLNYYGFGGGEVLPAGVQIAVATGTAGTGAPVLTGAVAAMADEPFDYIGLPFNDTASVNTLVTEMNDTSGRWSYARQLYGHVYTAKTGTLSELVTAGDQFNQQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVGMLPAPKGKRFTMTEQQTLLSHGVATAYVESGVLRIQRDVTTYRKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATYRQLERAGIVENYELFKQYLVVERDASDPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA
complement(4520963..4521133)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_21995; phage(gi19549000)     1.39e-33            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPVKGRSVPDPARGDLLPAEGRNVDENNYWLRREAAGDIRRVNKKVNTDDDKL
complement(4521142..4521702)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22000; phage(gi19548999)     5.47e-134           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPVIAALRARCPYFENRVAGAAQFKNLPEVGKLKLPAAYVVPGDDSPGENKSQTDYWQELKEGFSVVVILSNGRDERGQFASYDVVDDVRQMLFKALLGWNPEACGNPITYDGGTLLDLNRHELIYQFDFSVISELTEDDTRQQDDLNSLDELQTLAIDVDYLEPGNGPDGDIEHHTEITLPS
complement(4521699..4522205)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22005; phage(gi19548998)     1.25e-114           SalmonellaentericasubspentericaserovarTyphimuriumMTTSFLHVDFQQPAEMRFNRARVRRAFVTIGQRHMRDARRLVMRRARSAPGENPGYQTGRLARSIGYMVPRASKHRPGFMARIAPNQRNGEGNRRITGDFYPAFLFYGVRRGEKRRRSHHRGASGGSGWRLAPRNNFMVETLEKNRSWTRYFLARELRKSLKPERRHR
complement(4522180..4522590)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22010; phage(gi19548997)     1.98e-67            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYILPDPGELNKRVLIRLRVDMPADNFGVEPQYPVTFRTWAKVIQTSATTWQETAQTGDAITHYITIRYRRGITADYEVVCGDSVYRVKRQRDLNGARRFLLLECTELGECRQSHGGNNDDFLFAR
complement(4522587..4522910)       PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; GJE12_22015; phage(gi526244642)     2.22e-70            SalmonellaentericasubspentericaserovarTyphimuriumMLLTMEEIKAQLRLDEDFDTDDRHLQLLACAAQKRTETYLNRKLYAPDETIPDSDPDGLHLPDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
complement(4522885..4523112)       PHAGE_Shigel_SfII_NC_021857: hypothetical protein; GJE12_22020; phage(gi526244694)     3.45e-33            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGMRVEVIQAGEYDDGALPARVQEIALQAGLAERGISAKSSKAAKEKKPRPVKRAEYASDNGRD
complement(4523162..4524367)       PHAGE_Entero_SfI_NC_027339: phage major capsid protein; GJE12_22025; phage(gi849250290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQELQQKFDDFKAKNDKRVDAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPAGGAQNKLATEHKEAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEALDRNILTLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLELIEPLMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTSGDGTKKPKGFLAYESTDETDKVRAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(4524382..4525032)       PHAGE_Shigel_SfII_NC_021857: prohead protease; GJE12_22030; phage(gi526244640)       4.38e-155           SalmonellaentericasubspentericaserovarTyphimuriumMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLRAWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVRGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRTKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYSALSLRDAEDVGSALNALKNLNF
complement(4525010..4526251)       PHAGE_Shigel_SfIV_NC_022749: portal protein; GJE12_22035; phage(gi557307529)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGSVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVYYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(4526251..4526433)       PHAGE_Shigel_SfII_NC_021857: putative integral membrane protein; GJE12_22040; phage(gi526244693)     1.59e-34            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
complement(4526445..4528178)       PHAGE_Entero_SfV_NC_003444: large terminase subunit; GJE12_22045; phage(gi19548992)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDLAERAAKFIQLLPHTKGEWAFKRMPITLEPWQLFVICCAFGWVNKGTRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTDGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPVTIVQNFANMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKNMPGNDDLVKPVKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(4528192..4528677)       PHAGE_Entero_SfV_NC_003444: small terminase subunit; GJE12_22050; phage(gi19548991)     1.75e-113           SalmonellaentericasubspentericaserovarTyphimuriumMAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNITRQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGKKKATNPFLTI
complement(4528803..4529153)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22055; phage(gi19549040)     1.61e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
complement(4529204..4529536)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_22060; phage(gi100133)     5.28e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPVNIDPEQLNDEREQVIAKWLFKDVDLISQQIELGEENVKRFDELLSIFDCCQSSWFATEHLFDNTELEKVWHEFESNFNKYINGGESKDLLMKMLDKLISSRFVFESR
complement(4529999..4530391)       PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; GJE12_22065; phage(gi19549038)     4.79e-50            SalmonellaentericasubspentericaserovarTyphimuriumMKMSYWALILTFIACVAGGLVWSANHYHGKFLEEQKRADAAEQRADSTEAITENVLRTMAITNIIQEANQHAKQQIALESQRTQEDIKVAVADDDCASRPVPDVAADRLRKYADSIRAGSNDAVTGEPAR
complement(4530388..4531002)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_22070; phage(gi100131)     1.54e-150           SalmonellaentericasubspentericaserovarTyphimuriumMNQQLFQKAAGISAGQAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
complement(4531002..4531283)       PHAGE_Entero_mEp390_NC_019721: putative holin; GJE12_22075; phage(gi428782713)       2.26e-26            SalmonellaentericasubspentericaserovarTyphimuriumMELNDPTATINALLCACVVITLMFYRRGDSRHRPWVSRLAWLITVTYSAVPLAYLCGIYPHSSWPIIVANTIFLSVLVAVRGNVARLVDHLRH
complement(4531270..4531656)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_22080; phage(gi100130)     6.27e-82            SalmonellaentericasubspentericaserovarTyphimuriumMSDPISGTGLAGGALTGASVYGLLTGTDYGVVFGAFAGAVFYIATAADLSASRRLAYFIVSYIAGILCSGLVGSKLANLTGYSDKPLDAIGAVIVSALAVKILTFLNNQDIGSLVALITRRGGSGGAK
complement(4531802..4532059)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_22085; phage(gi100129)     1.08e-56            SalmonellaentericasubspentericaserovarTyphimuriumMQGEKQQPYFFNPGMTVEQLEDWLEQQKLHLSRYNRLVKEKAELEERLSDISVEIERMSAGGFNGKLSFPRESSPPLRNNQQGSV
complement(4532210..4532962)       PHAGE_Entero_SfV_NC_003444: antitermination protein Q; GJE12_22090; phage(gi19549033)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLEALPKYYSPKSPKLSDDAPATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEETRLQIIPYLVNFAFADYSRSAASKARCEHCAGTGFHNVLREVVKHSRSGVSVIKEEWGKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHGTPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQWYKGYADIIDKLVTKCWQEEAYAEAQLRKVTR
complement(4532976..4533965)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22095; phage(gi19549032)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVQAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLIRNDLADALPESAARKALRLPKPVVPSVTRESDLVPSVPATSIIQDKAKKVLALKVEPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
complement(4533973..4534782)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22100; phage(gi19549031)     4.88e-169           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDAYGRYSLNDLHRAAVASGANARTKEPGKFLSSQQTVELVHELTNTQNLGVDPVSVIHGGNERGTYVCKELVYAYAMWISPSFHLKVIRTFDMVTSAPEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNLAPRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMAKLGIVEQRERYSRTAINNIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESRFPELLKLLDTVH
complement(4534802..4535191)       PHAGE_Entero_SfV_NC_003444: crossover junction endodeoxyribonuclease; GJE12_22105; phage(gi19549030)     1.62e-90            SalmonellaentericasubspentericaserovarTyphimuriumMKLILPFPPSVNTYWRHPNKGAFAGKSLISTAGRKFQSAACAAIVEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVIPEGKVEITISKYEKTAGAAA
complement(4535188..4535514)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22110; phage(gi19549029)     2.12e-74            SalmonellaentericasubspentericaserovarTyphimuriumMTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKRGVARGITLHTAVKDDDSEAVGIIRSLLAGEENARLRATHWLHERGLKV
complement(4535511..4536164)       PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; GJE12_22115; phage(gi19549028)     1.52e-160           SalmonellaentericasubspentericaserovarTyphimuriumMSNKYCQALAELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA
complement(4536164..4536658)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22120; phage(gi19549027)     2.52e-111           SalmonellaentericasubspentericaserovarTyphimuriumMIMSLLNEVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPELQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA
complement(4536655..4537596)       PHAGE_Shigel_SfII_NC_021857: O protein family protein; GJE12_22125; phage(gi526244675)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGNRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFDASKSGKKAGFHPSESGGDPSVKSKHDPSDKKPSRPDASQPDTQTAEQDFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
complement(4537586..4537765)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE12_22130; phage(gi100119)     9.89e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRQVNRWFKDHYGVPVRVIRWEPETQRVIYLREGYEHECFSPLEQFRRKFREIEVGHEH
complement(4537941..4538498)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22135; phage(gi19549023)     3.72e-120           SalmonellaentericasubspentericaserovarTyphimuriumMGKHHWKIEKQPEWYVKAVRKTIAALPGGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA
complement(4538542..4538742)       PHAGE_Entero_SfV_NC_003444: repressor; GJE12_22140; phage(gi19549022)                1.06e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQCTSGAITKSDLRPDIYPKD
4538833..4539507                   PHAGE_Entero_SfV_NC_003444: repressor; GJE12_22145; phage(gi19549021)                4.37e-168           SalmonellaentericasubspentericaserovarTyphimuriumMKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGATKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPRRYKIKA
4539679..4539882                   PHAGE_Salmon_118970_sal3_NC_031940: recombination endonuclease subunit; GJE12_22150; phage(gi100052)     1.06e-19            SalmonellaentericasubspentericaserovarTyphimuriumMNRYFTCSFCGANELQAKKIIAKGGKDEVAICSECVVLCVGALINSSTTIRFTPNENAPLDARKSGG
4539891..4540166                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22155; phage(gi19549020)     3.47e-61            SalmonellaentericasubspentericaserovarTyphimuriumMKVQILNNSGEVVWSYDIAAPVDQSGDSWTNGKHQIMAGVVFSLRRALEQAEVFPSDPEWKWPFSICPNSESTFQKIGQKVALEEHQPTVS
4540442..4540752                   hypothetical protein; GJE12_22160                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumVVNAAQRTRVKVEADSRPSVDTHPPGVQPSPGTGRHPAPQLYAVCSPGGTSLYHCFRLVPSFLQNREEHHRTTGSPNPSGRQPPQVFFSVLWRNQPTLQGRYGA
4540749..4541129                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22165; phage(gi19549019)     1.50e-83            SalmonellaentericasubspentericaserovarTyphimuriumMMRSSKMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
4541195..4542019                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22170; phage(gi19549018)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQYLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGSLSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA
4542147..4542683                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22175; phage(gi19549017)     7.61e-131           SalmonellaentericasubspentericaserovarTyphimuriumMSFIKTFSGKHFYYDRINKDDIDINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNELSELRKCA
4542674..4543036                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; GJE12_22180; phage(gi19549016)     6.19e-83            SalmonellaentericasubspentericaserovarTyphimuriumMRMNVFEMEGFLRGKCVPRDLKVNETDAEYLVRKFDALEAKCAALENKVIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
4543036..4543845                   PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; GJE12_22185; phage(gi100108)     6.42e-80            SalmonellaentericasubspentericaserovarTyphimuriumMTTFTDKELIKEIKERISSMDVRDNVERRAYEIALASLEEDPVAWLHSDNGLGIPAITRSKNIADSWLSKGWYVQPLYIAKPVPVVPDARPSLNNGIVGFDEGWNACRAAMLYGAVPASQAYKLPQTQFKQVADLYEMQFDDGRTCAFHTDAQKAVQWLQACDGNRVQEYVKLERLQNALSGNSPVTPDGWVMVPKRLTAENGAKGALSGEFSETTFISCLECFGDDDCDTCDGSGRIEIKVPVTWSTIKSIWDKGIEYFAAKPSQEVK
4543845..4544417                   PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; GJE12_22190; phage(gi100107)     1.30e-102           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKNKDAPIVSIGAVFFTPETGDIGQEFYTVVSLDSAMKQGATPDGDTILWWLKQSSEARAAICIDDTLSISDALSELSHFINQHADNTKYLKVWGNGATFDNVILRGAYERAGQICPWAYWNDHDVRTIVTLGRSIGFDPKMDMPFDGERHNALADARHQAKYVSAIWQKLIPATSTEL
4544454..4544726                   PHAGE_Entero_mEp460_NC_019716: hypothetical protein; GJE12_22195; phage(gi428782341)     1.05e-53            SalmonellaentericasubspentericaserovarTyphimuriumMNTLFLLMAEFNTPNIELSAVCQKYFGMSPNTAEAKANACQLPIPTYRVGTSQKAKRCINIQDLAEYIDKRREEGRIEWERVRTNRKINN
complement(4544753..4545187)       PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; GJE12_22200; phage(gi966197913)     1.39e-46            SalmonellaentericasubspentericaserovarTyphimuriumMHLEVSINPETRAEFFDEVFLKFPELESSIIDDFKRYKATGELPHYFGRDVAYTQPYGAFRAGLMHIHLCLPPNKFPEKLPQPDRVCKKGDPDNDACLVYVQGELYENKYSLIAIMYPDAHEKARKHDVMSYLARIAQNYKDEN
complement(4545204..4545743)       PHAGE_Escher_HK639_NC_016158: hypothetical protein; GJE12_22205; phage(gi356870617)     1.25e-09            SalmonellaentericasubspentericaserovarTyphimuriumMNPFNAITFAALCGPLACPAAMAQEFIIQPAPVIAKPFEYSPSVEEFSRRMEEGKEILQKLTIAADDYYICLIDLNSQDAREFVSKNGTDTTEACEMFLRAFEEEVKRTIESPLPEFIRSELKVYWRHIAKARSSVTRLNNYIKSIFKETVTFSGRADLAGIAALASHTSNKLKSMQFH
4560679..4560693                   attR                                                                                 N/A                 CTTATCCGGCCTACA

#### region 9 ####
complement(4571637..4571984)       PHAGE_Burkho_BcepMu_NC_005882: gp01; GJE12_22325; phage(gi48696911)                  2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
4572560..4572847                   PHAGE_Burkho_BcepMu_NC_005882: gp21; GJE12_22330; phage(gi48696931)                  3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4572850..4573455                   PHAGE_Pseudo_B3_NC_006548: endolysin; GJE12_22335; phage(gi56692593)                 4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
4573468..4573782                   PHAGE_Burkho_BcepMu_NC_005882: gp25; GJE12_22340; phage(gi48696935)                  1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
4573942..4574397                   PHAGE_Burkho_BcepMu_NC_005882: gp37; GJE12_22345; phage(gi48696947)                  3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
4574394..4574591                   PHAGE_Burkho_BcepMu_NC_005882: gp38; GJE12_22350; phage(gi48696948)                  2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
4574581..4576008                   PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; GJE12_22355; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
4576008..4576532                   PHAGE_Burkho_BcepMu_NC_005882: gp40; GJE12_22360; phage(gi48696950)                  6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
4576584..4576901                   PHAGE_Burkho_BcepMu_NC_005882: gp41; GJE12_22365; phage(gi48696951)                  1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
4576861..4576989                   GpE family phage tail protein; GJE12_22370                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
4577086..4579440                   PHAGE_Burkho_BcepMu_NC_005882: gp44; GJE12_22375; phage(gi48696954)                  1.56e-60            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
4579440..4580393                   PHAGE_Burkho_BcepMu_NC_005882: gp45; GJE12_22380; phage(gi48696955)                  5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
4580393..4580602                   PHAGE_Burkho_BcepMu_NC_005882: gp46; GJE12_22385; phage(gi48696956)                  6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
4580590..4581633                   PHAGE_Burkho_BcepMu_NC_005882: tail protein; GJE12_22390; phage(gi48696957)          2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
4581643..4582365                   PHAGE_Burkho_BcepMu_NC_005882: gp48; GJE12_22395; phage(gi48696958)                  3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
4582693..4583055                   PHAGE_Entero_SfV_NC_003444: putative flippase; GJE12_22400; phage(gi19549013)        2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
4583052..4583981                   PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; GJE12_22405; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
4583981..4585528                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; GJE12_22410; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
4585692..4586051                   PHAGE_Burkho_BcepMu_NC_005882: gp49; GJE12_22415; phage(gi48696959)                  3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4586042..4587157                   PHAGE_Burkho_BcepMu_NC_005882: gp50; GJE12_22420; phage(gi48696960)                  2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
4587150..4587782                   PHAGE_Burkho_BcepMu_NC_005882: gp51; GJE12_22425; phage(gi48696961)                  5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
4587785..4589530                   PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; GJE12_22430; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
4589535..4590140                   DUF4376 domain-containing protein; GJE12_22435                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
4590137..4590592                   PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; GJE12_22440; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
4590841..4591131                   hypothetical protein; GJE12_22445                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
4591328..4592056                   PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; GJE12_22450; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
