gi|00000000|ref|CP045949.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4865665, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1158650..1158661                   attL                                                                                 N/A                 TTTTTAATCAAA
complement(1164912..1165079)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; GJE11_05590; phage(gi16130540)     1.31e-10            SalmonellaentericasubspentericaserovarTyphimuriumMLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
complement(1165093..1166157)       PHAGE_Entero_P4_NC_001609: integrase; GJE11_05595; phage(gi9627511)                  7.51e-56            SalmonellaentericasubspentericaserovarTyphimuriumMPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
complement(1166649..1168982)       PHAGE_Entero_P4_NC_001609: DNA primase; GJE11_05600; phage(gi9627512)                0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVNAVTGNLPPVAPEVIAAAEAETEADRKAAAALAVRLMEKTRPASGNAYLTHKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGTCHIIGGQKQAGKRLWIAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPQLRDKIARELAVIVRQLMQKFSDPMTARTLLQSQQNSDEALSIKRDADPAFDFCGYLEALPDPDGMYIGNANIIPRQPRLYLYHAYLAYMEAHGYRNTLSLTMFGKGLPAMLKEYGLSYEKRRKNQGIQTNLTLREESNADWLPKCDDPIAK
complement(1168997..1169317)       PHAGE_Entero_P4_NC_001609: hypothetical protein; GJE11_05605; phage(gi9627513)       1.13e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
complement(1169314..1169541)       hypothetical protein; GJE11_05610                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
complement(1169538..1170089)       PHAGE_Entero_P4_NC_001609: putative CI repressor; GJE11_05615; phage(gi9627516)      1.30e-47            SalmonellaentericasubspentericaserovarTyphimuriumMMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
complement(1170022..1170352)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; GJE11_05620; phage(gi9627517)     1.15e-39            SalmonellaentericasubspentericaserovarTyphimuriumMHTAFSSPSSAPAAPLMQVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIAERNRGYDAPFSKQPLFLACFFLSFPGIG
1170570..1170581                   attR                                                                                 N/A                 TTTTTAATCAAA
1170890..1171627                   PHAGE_Entero_P4_NC_001609: head size determination protein sid; GJE11_05625; phage(gi9627518)     4.91e-109           SalmonellaentericasubspentericaserovarTyphimuriumMTHTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYIEPEKVVMQQVKAWLEQAVKGCNIRLTDEPVLFKTGLSASTMPHMEHDVAATPVQRKFWQEKMREREADLKARGLLS
1171624..1171866                   PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; GJE11_05630; phage(gi431810990)     2.04e-17            SalmonellaentericasubspentericaserovarTyphimuriumMMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPAPRRVKGCYSSPFRH
1171883..1172449                   PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; GJE11_05635; phage(gi9627520)     2.75e-72            SalmonellaentericasubspentericaserovarTyphimuriumMTTLTLQQAFEACQTNKTAWLNRKTELAAAEQEYQELLLDDNASGSRRLQSLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELTAALAPELMGIKNQPAMIKNRALDRSASYLREALSVWLTAGNDINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLVAQ

#### region 2 ####
complement(1175622..1176818)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; GJE11_05660; phage(gi16130540)     7.27e-174           SalmonellaentericasubspentericaserovarTyphimuriumMARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGLRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLLTLVRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREHVFPSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHSDKNEVRRAYNRSTYLNKRIELMAWWGRFVYQTNL
1177000..1177047                   attL                                                                                 N/A                 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT
complement(1177159..1178136)       hypothetical protein; GJE11_05665                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDIKYSVSLLVVYAAIMILYISYLYNKKAFHMNAEPLTHQHLFWAALIIPFSLFIIFGIICWYGHTLRIDSTGFNNFLSISKLPLALLSLSLPFGVVVNNVHRTIQTDKQIKEAERKNKADSFYSHRKNTIEMFENLPFKTITITDKKYKLCFENNYVTYRYCYPFMSTYLVTYDADSDFIDRVKNVWLSLRDKINTIDFNNEQELLKHISSIENLLDQIHKLLQFKPFDLTEAYYTTYINETEGVKIFRTKFKNEWGIKDAINAYWHAYIIIIQAIEIKFDHKFMNQMESVRHYSLSQDKKLAKWEMFKVTGNTTTGIYEKEQK
complement(1178139..1179170)       PHAGE_Salmon_Fels_2_NC_010463: integrase; GJE11_05670; phage(gi169936064)            4.84e-175           SalmonellaentericasubspentericaserovarTyphimuriumMTIRKIDTGEWLCDLRPNGVKGKRIRKKFATKGEALAYEKYIASEMEEKPWLGEKQDNRRLSELIELWHDLYGRTLADSDRMMSKLKGICAGMGNPIAAQITAADFSKYREGRLKGEIPDVNGRCMQIQPQTVNHEQRNLSAVFGTLKKLGHWSLPNPLSGIPTFKVDEKMVSFLYPEEIKTLLHFLSESSSPHVLIIAKICLATGARWSEAEELEGSQVTPYRITYTKTKNRRVRSVPISKELFDEIPKKRGRLFTPCRKTFERVVAKAGINLPEGQCTHVLRHTFASHFMMNGGNILVLKEILGHSDIKMTMIYAHFAPTHLEDAVIKNPLTMLDLPTTEK
complement(1179170..1179736)       PHAGE_Entero_186_NC_001317: CI repressor; GJE11_05675; phage(gi9634086)              7.51e-36            SalmonellaentericasubspentericaserovarTyphimuriumMNLETGARQAIERICEVYGFTSRNQLAKHIGITNSSLGNRIMRDNFPADIAIRCALETGASLHWLVTGDGTMFDHVSSDTVRIPSYKFEGSTLVKTSSFMFDKVMIPDHKGNLEIIVEGNIKYLIDKADYSISDGKYLIEYSDTQSIKELTLLPGNKLRIDWGKYPLDCEVDDVNIIGKVIMTMVVNA
1180123..1180626                   PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; GJE11_05680; phage(gi418489686)     6.25e-48            SalmonellaentericasubspentericaserovarTyphimuriumMFDYQTSKHAHFDAACRAFAIEHNLEDVAAAVGMRPQILRNKLNPAQPHRLTCDELLAITDYTEDARLLDGMLGQINCLPSVPVNNATEGNMQLCALNATASVGAIAGEAVSTGHMTAARRTQILDRARDAIRSLSVLAYTVESRIQSAPVLAAAVDLVTANATGLM
1180821..1181249                   hypothetical protein; GJE11_05685                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKISTERAEVALKHCKRMRLQINPAYSDAGDWWDNLTPEWRGVVLHAAAVTSGTGVFKAHLSKCCWGELYERLGYRDMIQLRRGISRARLTFEGFGSLRDSDFSKRTANRPIKKAHPIYSSSGVQMVIAPHIVHKLQQQGNH
1181249..1181650                   hypothetical protein; GJE11_05690                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAIISVEGKSLGAELAVWGVPHNYAVAFAEKSTSKNGRIALHPFFFNDTEHMTNQRHWLAINAAFWCCVYREAESKEAQIEALAGIRAIFYAAGALGVGEIKALIQEWWRTTYELHLIPAPNHSAVTAQPAFH
1181718..1181951                   PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; GJE11_05695; phage(gi169936057)     9.67e-07            SalmonellaentericasubspentericaserovarTyphimuriumMHMTRQDLPGTKSGTDLLAMLTKATQEGKAAAADLCSTRLDKLATHAANEGLSATEIVELIREEAAAICSKGGAAWQ
1181942..1182811                   PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; GJE11_05700; phage(gi418489691)     3.60e-83            SalmonellaentericasubspentericaserovarTyphimuriumMAVKTPLKWVGSKARLMPQLLPHLPEGRRLIEPFAGSCAVMMNTDYDEYLIADVNPDLVNLYKTMAYHTDALLIELEALFSAGSLGDEENRAIFYYAVRDAFNQSGKSFGSESVEAAARFLYLNRHCFNGLCRYNRRGQFNVPFGKYKKTYFPADEIRAFAEKAKRATFITAHYSETLDLVRDAHDVVYCDPPYLTDTDNFTAYHERGFSHMDQGRLARNLRRLAERGIKVVASNSDLEMVHYLYAGFDTVRVNAPRSVGAAAASQKVAAELILKSPANPAIDVRAVVA
1182808..1183020                   hypothetical protein; GJE11_05705                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMAEIITGFYALFACITFAFLLWGECQDEFDHDAEDLGLITLSAVFWLPLVAAVLVAFLIDFWRMWVNRG
1183022..1185037                   PHAGE_Erwini_ENT90_NC_019932: replication protein A; GJE11_05710; phage(gi431810936)     8.50e-153           SalmonellaentericasubspentericaserovarTyphimuriumMLEPGQHHAVNAWRCETFAPGTPSDATITERRLWAVNPQDYEWRSQYLHEIPDWLAGYFGNRYEKLLAGRDGRRRANTFLRKTIGGNVLPRLRKVAARYKLAADALDLPFGKSLERLPSLDRPDLKKLAGQVSGWISQLLYDFTEQFDSGTDDARELHRRTLESYRNLCACCLMLNNQPPYWGEHEANEGQLDMRKAESGILRMMAPEWWYQRLKRARDVQREHMAIAVGQVQKAASAYVSRKALGEWIDQKKRNLEFFKKFDLLNDEGLRIALDSMVHRSVANPAIRRCELMVRMRGFEDMANEEGLAGEFYTITAPSRFHAVHSKGGFVSQWDGCTPQDTQRYLCGVWAKARAAISRAGIHIFGFRVVEPHHDGTPHWHMLLFMRPRDVDTVRDILCYHARITNSEELQTPNALKARFHVEAIDPAKGSATGYIAKYISKNIDGFALDGEQDDETGENLRDMAKSVSAWASRWRIRQFQQIGGAPVTVWRELRRLRDQVLTDRRMDAVLAAADVGDWAAYTQAQGGALVARRDLVVRLAYEITEQGNEYAEDVQRVQGVYSPLVPDSAVCTRLVKWQKVAKLAEAPAEAGFSGGNAAPWSSVNNCTEGGTRRRLKLELRSRGFEGSDDEIAILMRGSGLIFGQGALIYRNGRLQETRNEPMHELWPGWL
1185153..1185371                   PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; GJE11_05715; phage(gi418489693)     1.20e-10            SalmonellaentericasubspentericaserovarTyphimuriumMLVQDLFMETIALQRIALFTRLIAKSNCTGCEKDIALAWLSELTSDLESKLDEYESKNPREGGLSGGGSRFQ
complement(1185345..1185668)       PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; GJE11_05720; phage(gi17975123)     9.57e-26            SalmonellaentericasubspentericaserovarTyphimuriumMRRKRLKSRHHLTAGAWNMRVLKIECPECGSKAVIRKTNRKHRQIADIYCACSDVECGHTFVMNLTFSHTLSPSAKTGDAMVQKILNALSPDQRQMALDLLKATPAA
complement(1185665..1186726)       PHAGE_Haemop_HP2_NC_003315: portal vertex protein; GJE11_05725; phage(gi17981829)     1.07e-100           SalmonellaentericasubspentericaserovarTyphimuriumMSKKNRFVKRNPRGDKSKKMSIITFGKPEPVLTTGTDYRDIWYDNAADHFTQPIDRLALAQLINLNGQHGGIIHARKNMIVSDYLGGGLTYDQLEAAAFDYTTFGDIAIGKIRNGWGDVIGLEPLPGLYIRRRKVRDKATDQPGDYVVLQDGEPQVWPQEDIIFIKMYDPQQHIYGLPDYIGGVHSALLNSEAVIFRRRYYHNGAHTGGILYTRDPSMTDEMEEEIEQQLRDSKGIGNFSTILVNIPGGDGDAIKFIEMGDISAKDEFANIKNISAQDILNAHRFPAGLAGIVPQNTAGLGDVEKAERIYKKSEIAPIQRRFMTAVNNDPEIPERLHLNFDLSYTESTDKDAA
complement(1186723..1188498)       PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; GJE11_05730; phage(gi17981830)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAKYSEELKGVVRALYLRRYTPKEIASELNLPNARIVYYWAEKYSWADLLSFESTEEAIERRYQLLASRDNKTDLDLKEMDMLIAHATKLRAQSNKHKEKMASGQSNGQAAARDSNGDEPRPKRKNRKNDISSLTQADFDTWADEHLFEYQKHLRRNIGQQVRNILKSRQIGATWYFAFEAFENAVMTGDPQIFLSASKVQAEYFRSYIVNIAEQYFGITLTGNPIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFARLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGEEWKQGSKKRAAAQFPSFDEMRNGGRLCPDGQWRYVITMEDAIAGGFNLANIEKLRNRYNTATFNMLYMCVFVDSKDSVFSFSDLEACGVEVDTWQDHNPDAARPFGDRPVWGGFDPARSGDLSCFVIIAPPMYAAEKFRVLKVINWKGMNFLYQARQIELLFKKYNFTYLGVDVTGIGQGVFDNIQHFAMRVAVAIRYDMNTKNQLVLKAADVVESQRIEWDKNLKEIPASFMAVRRTTTQSGNAMTFVADRSQDTGHAEAFWAITHALHNEPLNYENKPKSRWGVRKEAA
1188660..1189463                   PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; GJE11_05735; phage(gi17981831)     1.15e-43            SalmonellaentericasubspentericaserovarTyphimuriumMSHLKTDWLCVATEGDTVDGRDIKRQWIIDMGETYDYNHYVALIWPEHEDDCGNFGEVLEATWHDGEDGLARLYVSLCPNMRLIFANHEDQLLFFSIEPEENWRGSGRTYLKGLAVTDTPASVGTTRLRFSSRRKKLSKQGYYSCVISRDGKIKQEIRMKNWQKLFGIKPKFEDETPPDDTAQGDDKLQALANAVNELEGRVAKIENQLNDVQGDVDTIAEVVDTEEFAAIRDNAKDIVKRFNDLGNKSTRTPGRKISEKAGKFNFL
1189525..1190547                   PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; GJE11_05740; phage(gi148727153)      3.25e-114           SalmonellaentericasubspentericaserovarTyphimuriumMHLNNRARDLLDKYSSGMAQQFGARDTSRYFSLNDPQENALRLALLESVEFLNMITCLDVDQLSGQVISVGSSVLHTGRSENGRFVRQVGVDGNDYSLVETDSCAALRWDLLSVWANAGKDENEFYNLVQAFTTQAFALDMLRIGFNGKSRAKTTNPTDNPNGEDVNIGWHERMKTLLDGNQIMTDPVVLDEAGDYKSLDAMASDLINAKIPAQFRNDPRLVVLVGADLVAAEQYRLYQAADRPTEKIAAQMLGSTIAGRPAVIPPFMPGKRMVVTPLSNLHIYTQRNTRMRKAEFVEDRKQFENKYLRNEGYAVEVPELYAAIDESAVTIGKVSEPAEG
1190551..1191252                   PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; GJE11_05745; phage(gi148727154)     2.92e-68            SalmonellaentericasubspentericaserovarTyphimuriumMALSPAQRHSQRIAMEQKLKRSQALETTESMHLLIKALEADVEHCRNLPTIADRVEFKRDVLLPRWTPTVEAYLESGQVYANPVFAWCVIWLFDVGDLDKALDWADIAISQQQATPDRLRSNFPTFVADTMLAWSQETSGRGESVEPYFSRTFERVASTWRLHEQVTAKWFKFAGLDLLRGEDGQTTAASVDDIETLEKADQLLATAEKYYLKIGVRTARQTIAARIRKLTQG
1191313..1191801                   PHAGE_Haemop_HP2_NC_003315: packaging protein; GJE11_05750; phage(gi17981834)        2.73e-33            SalmonellaentericasubspentericaserovarTyphimuriumMETGQSAFFGGIMFSGKPLDYQDEPLTNNGFWPDLNLKDFQAQRSLPADIDADTISQALLAAVAEVNAELENVEANWKAKGHTLAADVPGVSMGGLNSLCAQYMKAVFARAKADLLGEFATVGRRETHPGQESMETRAGLLAEASVVIRRMKGLKRATVKKV
1191798..1192304                   PHAGE_Haemop_HP2_NC_003315: orf21; GJE11_05755; phage(gi17981835)                    5.15e-15            SalmonellaentericasubspentericaserovarTyphimuriumMSQTQLESLTAFFQQNVPPRAMQSFDSVLDEMKFIPAAKDYGLGQYRQAVIRYDAVISWQRFPYRLCPPQLLMSLLAAWLDEADRELLDEVGLTEAEPDWDVSVEDEETATIVLTVPMAEELVIREDEHGAIPWQGKRWSLVNPEVWIAITANIYGVDETGAPVGGNE
1192301..1193008                   PHAGE_Haemop_HP2_NC_003315: orf22; GJE11_05760; phage(gi17981836)                    1.64e-11            SalmonellaentericasubspentericaserovarTyphimuriumMIAGGELNKKQLAELRKSLASMELPPKKRQRLIWRLAKYGVIAAAKRHVRNQEAPDGQKWPGRKTKRKGKMLRNLPKLLHIREMPEIQAVRIYLQGGGYRNGETPVPAGTVGYAQQNGMRVSVSRRSQPRKVEAGKMATPAQAKKLRALGYRVRTGKRWKKPTLGELTQTMPYSRAGLLIRKLSGKAVKTSWTVDLPARVFLGMSDDEFDNALARQLQAIGFGWDVKAQDIKGKA
1193005..1194132                   PHAGE_Haemop_HP2_NC_003315: tail sheath; GJE11_05765; phage(gi17981837)              6.97e-130           SalmonellaentericasubspentericaserovarTyphimuriumMTWPNVTVNQVNQLLGETNEVERTLLFIGTGTKNVGKTLAVNAQSDFDALLGEGESPLKSDVLAALANAGQNWWAFIHVLPADAEDDAWVKAVLAAQVVCSVEGVVLSSDVTAKAPVNQAATLRSTLISKYGRWVWFILAVQGMQEEEAQADYLTRVSAIQDGIAEKAVQLVPRLWGNEPGVLAGRLCSRAVTIADSPARVKTGALLNLGSDEMPVDGTGAVLELATLQALEAQRFSVPMWYPDYDGFYWADGRTLDVEGGDYQSIETLRVADKAARRVRLLAISKIADRSLNSTPGSIAAHQTLFARPLREMSTAASINGVSFPGEVKPPQEGDVTIVWKNKKTVDIYLVVRTWEVPLQITISLLLDASLEGAA
1194129..1194584                   PHAGE_Haemop_HP2_NC_003315: tail tube; GJE11_05770; phage(gi17981838)                3.57e-50            SalmonellaentericasubspentericaserovarTyphimuriumMSKRISGMSFDTYLDGDLIHIEKITLDITDNSAAAQTRGVPDGHVDGDVAAEGEIEVSSKVLGVLTAKARAAGSWRGIPPLDFLFYAKAGSEEMKVESFGNKLQLSNLLDIDPKGGGVATHKIKYFVTSPKFVNINGVPYLEAEATENLIG
1194595..1194897                   PHAGE_Salmon_SEN1_NC_029003: holin; GJE11_05775; phage(gi971764918)                  3.23e-29            SalmonellaentericasubspentericaserovarTyphimuriumMQEHEKSLYSLLIMGALIAVAKVLASDDPITPRLFISRVILGSFVSVIAGAVLIQIPEASPLAIQGLGAALGIAGYQAVEMWLRRRAAGKKNGSVTNDPE
1194884..1195225                   PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; GJE11_05780; phage(gi48697087)     8.02e-32            SalmonellaentericasubspentericaserovarTyphimuriumMTLSEKQQLFTVMVANLIHWAEERGYRLTFGEAYRTPEQAALNAKKGSGISNSLHTQRLAVDFNLFVNGQYQTRTEDYLPLGEYWESLGGSWGGRFKSRPDGNHFSLEHNGVR
1195225..1195605                   PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; GJE11_05785; phage(gi219681271)     1.33e-11            SalmonellaentericasubspentericaserovarTyphimuriumMSHAQWLVVVALAFVWGWLTADWRRDSLELAINTAAQVSGNESRKVMQGIASDSARALEDKLEALRNAQPREIRTEVLKPVFTNRCLSDEFVSMYNSAVAGTERALSGKPENTMRHAAAAPERGNR
1195710..1195967                   PHAGE_Haemop_HP2_NC_003315: orf26; GJE11_05790; phage(gi17981842)                    8.83e-17            SalmonellaentericasubspentericaserovarTyphimuriumMEQIKLCVCGAYIVFEPNQTAYNKLINEMAMDNKVAPANNYLMRIVTPETKEALIDVLKRPGAALQLVSKVNDIYAPELEIEVKN
1196155..1198215                   PHAGE_Haemop_HP2_NC_003315: orf27; GJE11_05795; phage(gi17981843)                    3.77e-81            SalmonellaentericasubspentericaserovarTyphimuriumMKQLDFTLSLIDKLSRPLKQAQGNVTGFAEKSKEAFMQIGGGVLALAGTGMAIKGALMPAIEMYDALNDAAAKGIDDSALKAVQRDALRFSTTYGASAVEFVQSTESINASIAGLTGNELPKVTKVANTLAFALKSTAAETAEFMGQMFGNFSADANRLGKVEFAEQLAGKMVYMRKTFGTEMAAIKDLMEGARGVGTNYGVGLDEQLAVLGQLQRTLGTEASSAYEGFMTGAIEGGKKLGLSFTDSTGKMLSMPEMLIKLQGKYGKSLEGNLKAQAELDAAFGDSSAVVKHLYGNVALLQRNITELGGADGLKRTQEMAQKMVKPWDRFVAILKAIQTVIGLTLIPVLYPVLNRLADMGQTFARWMQLFPNIARVVGYAAMALLSFAAVGAVANIVMGVSRFIMMGLRGIWVALTAVTKIYTAAVWLGNIAVVAWNATLKFLRGTLLAVRMAAMMAGIGINLMSWPILLVIGAVALLAAGCWLLIKHWDTVKNAVMDTAAFQACARVVAWLAGVFASAWQFISEGWNSFISMLTGFSPSQALSGLATGIVSLFDNVWLSVKNGFLKSWNWIVSKLNNIPGVDIELAGAASAGIAKNETAVYPVPELKQSVKAEGALPAVTQNSFTPDRLLTGGELKGIEKGGITKTINSNAKSVTDNSRKIDTVNIYPKEMITPGQLMEFQELGA
1198212..1198541                   PHAGE_Haemop_HP2_NC_003315: orf28; GJE11_05800; phage(gi17981844)                    4.38e-35            SalmonellaentericasubspentericaserovarTyphimuriumMSESLYIDLLIQGGDFVLNTGYEPELCNNRKSIGQDIIHSIIESGLATELIAERSPTMRADIFTRMELLIEDDERIIPGTVEISEESQKRLWITASTYDFGGISAQVDL
1198538..1199722                   PHAGE_Haemop_HP2_NC_003315: orf29; GJE11_05805; phage(gi17981845)                    3.81e-146           SalmonellaentericasubspentericaserovarTyphimuriumMTEKPQVDFEEVVKASGMPVTESEVRDRFNAIAAEEGMITNTSRMSPFWRLITAIVTAPVMWLKEVLVSTVLANMFVATASGSMLRLLAWAVNVTAKPASAAQGVIRFFKEDARAVVTVKAGTVIQTERINGRVYELATTGDVVIPSCTASALLPVKATGAGGAYNLAPGYYRILPVAVDGISHVASEENWLTVPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIAGVAGLSIDRIFFEHEAPRGPGTANAYLLLDSGVASAPFVNAVNDYINTQGHHGHGDDMQCYAMPETLHDLAVTVYVRNLANLTDDERNSLKAGIENMIRCAFRENADFDVRKTWPYSRFSFSQLGREIHKTFALADSLAFSLGDITSELNVPRLKSLVVSLENE
1199715..1200302                   PHAGE_Haemop_HP2_NC_003315: orf30; GJE11_05810; phage(gi17981846)                    3.85e-58            SalmonellaentericasubspentericaserovarTyphimuriumMNELMKKLAGMVLPSWMNQGEPKKLLKTARRFWAEVYGWITWPLNQFDPLTCAPALLNLLAYDRDITRFDGEPLSLFRKRVAYAFVNARDAGSVEGFINIFERLGIGYVELRERQPDIDWDVILVRVTDSQIANNTQLLIQIIRQYGRTCRRYQFEVITSEKMAIRAGWDQGEYVVYPASLAGTETRSATFSAGL
1200313..1202364                   PHAGE_Haemop_HP2_NC_003315: tail fibers; GJE11_05815; phage(gi17981847)              2.06e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSQTAITLAFEHWKAQQGATGEPVLLDEFVFANVPGLNPDIPVDRSEALPPAEQIVHRQPVTRTGVVNENGVVYSAVLGADVGDFSFNWIGLLSKASGTLAMIVHAPLQQKLKTAEGQQGNVLTRSFLMEYNGAQTETGINTPAETWQIDFTARMAGMDERQRLENADIYGAAAFFGDGWLVGKTGNQFFVTKGTGYVAGLRTSLAENQNITVTTKPVKVWLDVCWTGSLTSVWNVQSKITVAENLADYVQNGVQHYVFAVARIDENGTITDLRPKGSLSEQKGEGDFLRKDKNLSDLEDKASARNSLELKSAALREVGTRFSDVMEVGAGRLLAGTYINAEEDAKSIGERAATGCQFMRAHQAPDAPDQASYWQIITLTEVVSPTSVVDVLAISGNNVLFGHGSGAGITSWRHVAMLEGAAFTGDISAPNMRSGNSVTIGDGTGGMATGGVDGAGFNGNNMNVKSWDGIGFQNAADLAIRAYISTKLGIIAASESVYAGSANLYKNGDVYGDKWSTGNGPNWLSLFLEHLDSQIRNDLTTWTTNNFPTKSDVSAALSLKPGRQYITQIGVYQNDKSKPFMLHDDNSGVFLATTGMLPTAGLGANGWHRDNATGLITQWGSGGFSSGQRINFPVAFPNACGAVVANDTGIGTLAISTTEQDAGGFTVRGSQATFGLSWIAKGY
1202366..1202806                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; GJE11_05820; phage(gi557307547)     3.34e-16            SalmonellaentericasubspentericaserovarTyphimuriumMATVAKGYSYVYDAKTNGFYAISLKDNYEKADSWPVSGVKITDEEHKILMDGQSAGKVISVDENGKPVLTDAVIDYVALATVERDRRMSVVTAMISQRVDAQDDGDITDDELTELSELREYRAKLRRLDLTSAPDIAWPEVPEYVA
1202796..1203521                   PHAGE_Haemop_HP2_NC_003315: orf33; GJE11_05825; phage(gi17981849)                    7.44e-13            SalmonellaentericasubspentericaserovarTyphimuriumMWREARLAFADSLAALNCSVVPAHPWINGLGQQTDNGAYLSPVNAVRYLAERLAGTNGNADVMIMMVTGQTHENFMTRLNGLVDVFPAPAFTQVKRLAQSAAVLAIEKMQIPANAGAGLPVAIPLSVPTSRAALSAAAVSQAQKAASAGFSLDGLKQQLGEFTQLRDSMISDVASGLNDLQGKSARAWVFTSTGDTATTLLELVKDIPQPSAVYTAAVMLVGDNLDGIKGMIHDFDPNTGA
1203493..1204038                   PHAGE_Haemop_HP2_NC_003315: orf34; GJE11_05830; phage(gi17981850)                    4.37e-31            SalmonellaentericasubspentericaserovarTyphimuriumMTSIPTLALNGEAIQLKNMRVTVSQQFQDKDQSGQTSATTKSEQGAKGKELRISGEIPFKSPEILKRIFELASATDAGGNRQKYRVAHEVARAVNFREATFSGTLDAPQQDGKMAWLVTFTLAEHISVQEKREARATGKTSAKKQTAGNAGQSGGQSAGEDEEKLTWFEKRVLKPVNDALG
1204041..1205741                   PHAGE_Haemop_HP2_NC_003315: orf35; GJE11_05835; phage(gi17981851)                    3.60e-152           SalmonellaentericasubspentericaserovarTyphimuriumMKPVKRLYLSTDEVHLADASLVLELNSCGRGFITAQTTTDYTGKLVRLDVGYSDLLLRWFTGYVERAQPAENGFQRLFVRELVGIFERMWPCSFQHPTLRKVASWLEENSGIAVSVPDVPYSDKPIPHFTHNGTGYQLLNNLGRAFSIPDYIWYQLPDGSLYVGGAEKAMFAGRPVDIPAEFSQGAAGGNSITLPVIQSLRPGVELNGERVTKVHLSNDTMAVTWTPRNRATGQPLQKTPAQRQIESHYPELASGLHLPKLARVVAPSEAVKSGNFADPFRPRYAVDVQLLDADGNPDNQTPVYSAVPLPVPMAGNDSGMFQFPPEGTLVEVAFTGGRPDKPFIRQTLPDGTSLPDVKPGEQLQQQRAEVSQRVTQAGDWVRQTDQTISETSMARTVKADTEQRELVSRETMVKATDKTTVLGTSTLMAGAIQQVSAGDYSQAVKGNRLASIEGNDETDITGKQSTKVAGAVDVDVGGALTEKIAALRKSVAAGGQQIMGPTVHIGSESVNTLTMMLDTIDLLAELAQQCASHSHPSVGTPTNAGAFTQTAEKAGETRNKYQKIIA
1208901..1208948                   attR                                                                                 N/A                 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT

#### region 3 ####
1273209..1273784                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; GJE11_06115; phage(gi712913000)     1.52e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1273816..1274466                   anti-sigma-E factor RseA; GJE11_06120                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1274466..1275422                   sigma-E factor regulatory protein RseB; GJE11_06125                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1275419..1275898                   SoxR-reducing system protein RseC; GJE11_06130                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1276149..1276161                   attL                                                                                 N/A                 TATGAAGAACATA
1276396..1277625                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; GJE11_06135; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1277603..1277887)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06140; phage(gi169257265)     2.94e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1277928..1278167)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06145; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1278210..1279367)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; GJE11_06150; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
complement(1279330..1282257)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; GJE11_06155; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGITLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKIFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1282384..1282734)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06160; phage(gi169257261)     2.14e-82            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1282756..1282914)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06165; phage(gi169257260)     1.82e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
complement(1283371..1284033)       hypothetical protein; GJE11_06170                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSNDPYGNRAETDRFRQEATKYLSDESDINTLVSVFKHVRIYSMIIEMNTNLSHKSHVKGIIYDSLNSIVAILNKRERYLHLNLRSMIEHIARIALNKTYSGGDFDGTVRRRDFDYLKSNRRNENWNYLHNVYINACHYVHFSPQANINTSATFLQLLVNDCHSSQKNLIRNLHRLTSSVMETYITYFHYEVASTFYRSMADLKYLLGNSLYTKFKALN
complement(1284033..1284419)       hypothetical protein; GJE11_06175                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDKEQYNTLFRFAHGGVTKESAIGLFVTILLDKDLLKSNHDVKDFVESVFSIALLPYVVRSRTLICAKICRFLVSRERKEINNYGVMARSYFENIFSKEEDLQGHKKRNTALSNMDLWVSRMLKKGDK
complement(1284412..1285251)       PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; GJE11_06180; phage(gi418489414)     1.08e-33            SalmonellaentericasubspentericaserovarTyphimuriumMPASVISFINMKGGVGKTTLCVGIAEFMANYLGKRVLVIDVDPQFNATQSLLGHYGRVDEYLDQLQTNKITIRRIFEVPTSIMDTAQAIRPVDVITKVSDNLDVILGDINIIFDTSQESVRIFKIKRFIDDNNLRDQYDYIFLDSPPTISIFTDASLVASDFYVVPVKIDHYSILGATSLVSVVRNVRHNHNPNIRHLGFVYTNTDDELTLKTSKIKDNFEEKFSEFYFFEHKLSYVRDLMVGQQGNIPSCYTKSRSDISAISTEFALRVDQLMVSENG
complement(1285310..1285705)       PHAGE_Entero_mEp237_NC_019704: hypothetical protein; GJE11_06185; phage(gi435439303)     8.43e-53            SalmonellaentericasubspentericaserovarTyphimuriumMKEKTHQINHPQVQRLNEILELKKLTKSDMARICGVSAQSVNNWFVRGTIGKSSAIKLADALGVSLEWVLGQEVDERDGLKADERRLLELYRQLPDDEEKQNFLRVLSLRLKELDAMYEKYMKGRIRTRED
1285805..1286047                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; GJE11_06190; phage(gi169257257)     2.42e-13            SalmonellaentericasubspentericaserovarTyphimuriumMKAIDKAITRAGTATRLAELLEVSAMTISHWRNRYQGVVPADRVLPIYSATGVTPHELRPDLYPNPTDGLPSQEASAKQP
1286007..1286381                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; GJE11_06195; phage(gi169257256)     8.81e-87            SalmonellaentericasubspentericaserovarTyphimuriumMDYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1286473..1287309                   PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; GJE11_06200; phage(gi428781918)     7.37e-69            SalmonellaentericasubspentericaserovarTyphimuriumMANTAEVINFPVPDVAHKEPRVADLDDGFTRIANEILEAVMHAGLSQHQLLVFMAVMRKTYGFNKKSDWVSNEQLSELTGILPHKCSSAKSALVKRGILTQTGRVIGINKTVSEWSSLPVKGTEKKPYLEKVNLPESGKKSLPESGNGYYPNQVNTKDTITKDSKDNSNKPPKPPRAVSFDASSVQLPDWLSSIIWSSWVEYRRDLKKPIKSQQTVTQAINLLDRCRLNGYTPEEIINRSIANGWQGLFEPDGQAKRSRDTDQESIHWNSPDAWRDFL
1287306..1288001                   PHAGE_Escher_HK639_NC_016158: replication protein 14; GJE11_06205; phage(gi356870655)     5.87e-70            SalmonellaentericasubspentericaserovarTyphimuriumMKPELYRAINNRDGAAMASIAGGNPEHGRVVNSDAERLVDALFMQLKQIFPAATQTNLRSDADERVAKQQWIAAFSENGIRTRKQLSAGMQKARSSQSPFWPSPGQFISWCREGSGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELIRAAGDILHDWEKRALAGKPIPPVCRALSAPSRDRGPTPAELLMAKYKQRKDAGLI
1288015..1288713                   PHAGE_Salmon_SEN22_NC_028696: EaA protein; GJE11_06210; phage(gi966201339)           3.54e-90            SalmonellaentericasubspentericaserovarTyphimuriumMKERGITDGLTMNQLAERNAEHVTTIAALEARCAALVAENVGLKYQEPAGYHVIKECGKVGCSVATLEEAEKTRDFWNKKWTIRPYFYSAQPASERERIRREHAEWSDKTFGDVGPVGPLKHLSKEALETAAEPGDLSELADMQFLLWDAQRRAGITDKQITRAMVEKLEINKSRQWPEPKDGEPRLHIKKHPAPVVPEEITADGIIGMHECGFVEGWNACRAAMLSKWITK
1288821..1289453                   hypothetical protein; GJE11_06215                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKYSRVEQSTGTSIDHNLGYFLDPQKYVPITEFVDESAALIKLNLIHENFLSIVIENLRREGTEKFVDVDKYFMPKIKTAVALGLPVSLAKCLTEMNNIRNKYAHKIEYIITDEDAERIDSLIMSVPVDDINHASLIDSTLITSITNLGASSIAFMNDIPKDFPDNRRRICKLVAMAFCISNLGAFWLLNELHRQGKLKMGSTKMAFKPS
1289696..1289929                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; GJE11_06220; phage(gi169257250)     1.99e-50            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1290046..1290294                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; GJE11_06225; phage(gi435439314)     2.86e-52            SalmonellaentericasubspentericaserovarTyphimuriumMSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
1290329..1290931                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE11_06230; phage(gi169257248)     1.63e-146           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
1291140..1291751                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; GJE11_06235; phage(gi169257246)                 1.02e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1291748..1291888                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE11_06240; phage(gi169257245)     5.71e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
1291885..1292562                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; GJE11_06245; phage(gi169257244)     2.69e-165           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
1292835..1293398                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE11_06250; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarTyphimuriumMTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
1293740..1293816                   tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
1293905..1294093                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06260; phage(gi169257242)     3.75e-40            SalmonellaentericasubspentericaserovarTyphimuriumMKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(1294308..1294994)       PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; GJE11_06265; phage(gi169257241)     7.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumMPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
1295270..1295599                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; GJE11_06270; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1295583..1296035                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; GJE11_06275; phage(gi169257239)     3.12e-106           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
1296053..1296505                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; GJE11_06280; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(1296741..1297142)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06285; phage(gi169257237)     7.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
1297429..1297974                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; GJE11_06290; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1297946..1299877                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; GJE11_06295; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1299861..1300064                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; GJE11_06300; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1300153..1301640                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; GJE11_06305; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
1301630..1303126                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; GJE11_06310; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
1303139..1303486                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; GJE11_06315; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
1303541..1304569                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; GJE11_06320; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
1304627..1304986                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; GJE11_06325; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
1304997..1305380                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; GJE11_06330; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarTyphimuriumMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
1305408..1305986                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; GJE11_06335; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(1306035..1307165)       PHAGE_Phage_Gifsy_1_NC_010392: transposase; GJE11_06340; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
1307274..1307675                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; GJE11_06345; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1307683..1308429                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; GJE11_06350; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarTyphimuriumMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
1308480..1308875                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; GJE11_06355; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
1308872..1309210                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; GJE11_06360; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarTyphimuriumMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
1309182..1312277                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE11_06365; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
1312280..1312609                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE11_06370; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarTyphimuriumMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
1312619..1313317                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE11_06375; phage(gi169257219)     2.74e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
1313324..1314061                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE11_06380; phage(gi169257218)     1.27e-147           SalmonellaentericasubspentericaserovarTyphimuriumMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGENLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
1313959..1314606                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE11_06385; phage(gi169257217)     6.47e-156           SalmonellaentericasubspentericaserovarTyphimuriumMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
1314668..1318030                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; GJE11_06390; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
1318069..1318311                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06395; phage(gi169257215)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
1318365..1320737                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; GJE11_06400; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1320734..1321558                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; GJE11_06405; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
1321548..1322126                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; GJE11_06410; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1322223..1322450)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE11_06415; phage(gi169257211)     6.87e-51            SalmonellaentericasubspentericaserovarTyphimuriumMPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
1322557..1322769                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE11_06420; phage(gi100036)            3.13e-08            SalmonellaentericasubspentericaserovarTyphimuriumMISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
1322832..1322897                   DUF4113 domain-containing protein; GJE11_06425                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKREILSLRYTTRYSELLRVK
complement(1323261..1323447)       PROPHAGE_Escher_CFT073: putative transposase; GJE11_06430; phage(gi26246170)         2.33e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPIIAPIPRTERRLMQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLDC
1323477..1323641                   PROPHAGE_Xantho_33913: ISxcd1 transposase; GJE11_06435; phage(gi21231544)            4.98e-07            SalmonellaentericasubspentericaserovarTyphimuriumMAIDQITQSGLSSIKVIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
complement(1323676..1324035)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE11_06440; phage(gi169257210)     2.50e-82            SalmonellaentericasubspentericaserovarTyphimuriumMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSN
complement(1324354..1324491)       hypothetical protein; GJE11_06445                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(1324976..1326469)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; GJE11_06450; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
1326873..1326885                   attR                                                                                 N/A                 TATGAAGAACATA

#### region 4 ####
complement(1710217..1710420)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; GJE11_08170; phage(gi428782403)     2.21e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK
1710723..1711514                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE11_08175; phage(gi169257320)     3.48e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
1711811..1712014                   phage tail protein; GJE11_08180                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
1712183..1714549                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE11_08185; phage(gi169257322)     2.16e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
1714634..1714870                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_08190; phage(gi23505490)     8.21e-52            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1714878..1715867                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE11_08195; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1715882..1716250                   PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; GJE11_08200; phage(gi148609434)     4.66e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(1716279..1717610)       AAA family ATPase; GJE11_08205                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
1717907..1718236                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); GJE11_08210; phage(gi23505495)     2.54e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
1718250..1718693                   PHAGE_Entero_SfV_NC_003444: capsid protease; GJE11_08215; phage(gi19548994)          1.43e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
1718699..1718842                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE11_08220; phage(gi23505467)     3.76e-28            SalmonellaentericasubspentericaserovarTyphimuriumWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1718829..1720070                   PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE11_08225; phage(gi23505468)           4.38e-63            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
1720073..1720600                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE11_08230; phage(gi100034)     6.18e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
1720978..1721421                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; GJE11_08235; phage(gi971758532)     2.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(1721475..1723304)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; GJE11_08240; phage(gi255252697)     3.17e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(1723652..1723942)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; GJE11_08245; phage(gi46402108)                  3.33e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
1723970..1724473                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; GJE11_08250; phage(gi100082)      1.50e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM

#### region 5 ####
1961731..1961743                   attL                                                                                 N/A                 TATGCAGGAAAAT
complement(1969562..1970029)       PROPHAGE_Salmon_LT2: integrase; GJE11_09410; phage(gi16766072)                       5.85e-46            SalmonellaentericasubspentericaserovarTyphimuriumMGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQ
complement(1970504..1970977)       PHAGE_Escher_phiV10_NC_007804: putative protease; GJE11_09415; phage(gi89152430)     9.11e-53            SalmonellaentericasubspentericaserovarTyphimuriumMALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
1971043..1971056                   attL                                                                                 N/A                 AAAAAAAACCGGCA
complement(1971141..1971216)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
complement(1971625..1971915)       PROPHAGE_Escher_Sakai: putative integrase; GJE11_09425; phage(gi15834507)            3.32e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(1972111..1972186)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
complement(1972287..1973084)       DgsA anti-repressor MtfA; GJE11_09435                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
1973173..1973262                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
1973251..1973263                   attL                                                                                 N/A                 CTCTCTCCGCCAC
complement(1973376..1974365)       PHAGE_Salmon_ST64B_NC_004313: Integrase protein; GJE11_09445; phage(gi23505472)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(1974367..1974609)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09450; phage(gi23505473)     6.59e-55            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
complement(1974634..1975203)       PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; GJE11_09455; phage(gi23505474)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
complement(1975207..1976040)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09460; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
complement(1976037..1976654)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09465; phage(gi23505476)     1.91e-152           SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
complement(1976651..1977166)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09470; phage(gi23505477)     1.40e-126           SalmonellaentericasubspentericaserovarTyphimuriumMSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLVFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
complement(1977163..1977393)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09475; phage(gi23505478)     1.32e-49            SalmonellaentericasubspentericaserovarTyphimuriumMKLEMYTLDGSVIVDSNLVTQFYPDYKSGGELTVIETISATGETFTVRVKHSFLQVTSALATAWSVDEKKAEGAAQ
complement(1977464..1978003)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09480; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
complement(1978140..1978967)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09485; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNAASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
complement(1979598..1980293)       PHAGE_Salmon_ST64B_NC_004313: regulatory protein; GJE11_09490; phage(gi23505482)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
1980391..1980615                   PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; GJE11_09495; phage(gi23505483)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
1980644..1981198                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE11_09500; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
1981195..1982352                   PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; GJE11_09505; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
1982349..1982573                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE11_09510; phage(gi100121)     1.47e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
1982570..1983388                   PHAGE_Salmon_ST64B_NC_004313: putative replication protein; GJE11_09515; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
1983390..1983872                   PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; GJE11_09520; phage(gi23505487)     3.66e-117           SalmonellaentericasubspentericaserovarTyphimuriumMSLMGDVQKFIESHPGCTSSDIANAFADFPRKSVLQSTSKLRQCRRVAHRFEGKTRRHFALETDIQPDQEPDIGTKPVRSCYVGTNDPQVIMHLIRQAETLESGGLFRRAATVWMEAFRESHIPSERSAFLARRERCLRKSRKSVASGSEWYLSGNYVGS
1983872..1984765                   PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; GJE11_09525; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
1984762..1985151                   PHAGE_Salmon_ST64B_NC_004313: holiday-junction resolvase; GJE11_09530; phage(gi23505489)     1.05e-91            SalmonellaentericasubspentericaserovarTyphimuriumMRLVLPFPPSVNTYWRAPNKGPLAGRHLISAVGRKYQSAACVAIIEQLRRLPKPSTELAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAD
1985168..1986028                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09535; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1986036..1987025                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE11_09540; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
1987036..1987659                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09545; phage(gi23505493)     8.69e-153           SalmonellaentericasubspentericaserovarTyphimuriumMTPRQRRQHRNAIEKAAAAPRKSWLGKFRPLTSVQSAWVKSLLSVWGECYGGRTSEEAMLDCCGFWSCLQDEEWTDNEAKRITETIKGLRKIGYKGEALLSMARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
1987792..1988049                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09550; phage(gi23505494)     2.83e-57            SalmonellaentericasubspentericaserovarTyphimuriumMQDGKQQPYFFNPGMTPEQLEDWLGQQKLHLTYYNQLVNEKAALEERLNEISAEIERMSAGGFKGKLSFLWDPSPLPRNRQQNND
complement(1987979..1988413)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; GJE11_09555; phage(gi557307562)     5.90e-08            SalmonellaentericasubspentericaserovarTyphimuriumMSNYSDLFQIIKIRVCQNNDFPTYSLAGTNNYRASQVWYRIGQIFTLECVLAEYRRCCSSDYYLLDNEKALHHLIFQITKWKLEDIRGLSLNDSLFIISDRLKPDYMPAEAAQFLRSLKLPVNHYSVDDFSEADWDPRENSVFL
1988575..1988919                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); GJE11_09560; phage(gi23505495)     1.43e-56            SalmonellaentericasubspentericaserovarTyphimuriumMKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
1988922..1989536                   PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); GJE11_09565; phage(gi23505496)     1.43e-151           SalmonellaentericasubspentericaserovarTyphimuriumMNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
1989533..1990018                   PHAGE_Salmon_ST64B_NC_004313: lysis protein; GJE11_09570; phage(gi23505497)          6.38e-114           SalmonellaentericasubspentericaserovarTyphimuriumMNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
1990231..1990650                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09575; phage(gi23505498)     6.61e-98            SalmonellaentericasubspentericaserovarTyphimuriumMKYPTVIVNGVSVRVDEDGRYNLNDLHAAAVANGEATESQRPSNFLRSAQIKRFISALKAKAQKRALKEIQPLKVIKGGVDSGVWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
1990870..1991172                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09580; phage(gi23505499)     2.09e-69            SalmonellaentericasubspentericaserovarTyphimuriumMSELNYEAIGRCKILNEKIKALHAERMKAIGDLRSSVYSLHQKGDINRVPPELVEFDPQSLTDLVEKVSHYDSELMRAVHEYNNWCAEAGEKPVKLIKLD
1991233..1991583                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09585; phage(gi23505500)     3.07e-81            SalmonellaentericasubspentericaserovarTyphimuriumMPPRTPKACRVRGCRSTTTDPSGYCESHRSEGWKQYKPGQSRHQRGYGTKWDVIRARVLKRDKGLCQLCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
1991709..1992203                   PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; GJE11_09590; phage(gi23505446)     1.33e-117           SalmonellaentericasubspentericaserovarTyphimuriumMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
1992200..1993933                   PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; GJE11_09595; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
1993945..1994127                   PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; GJE11_09600; phage(gi23505448)     4.87e-35            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
1994127..1995368                   PHAGE_Salmon_ST64B_NC_004313: Portal Protein; GJE11_09605; phage(gi23505449)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
1995346..1995996                   PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; GJE11_09610; phage(gi23505450)      3.83e-156           SalmonellaentericasubspentericaserovarTyphimuriumMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
1996011..1997216                   PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; GJE11_09615; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
1997267..1997467                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09620; phage(gi23505452)     9.95e-42            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
1997470..1997793                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09625; phage(gi23505453)     2.93e-73            SalmonellaentericasubspentericaserovarTyphimuriumMLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
1997790..1998194                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09630; phage(gi23505454)     9.25e-96            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
1998166..1998678                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09635; phage(gi23505455)     4.71e-121           SalmonellaentericasubspentericaserovarTyphimuriumMPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
1998675..1999235                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09640; phage(gi23505456)     1.38e-136           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
1999239..1999403                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09645; phage(gi23505457)     1.90e-32            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
1999393..2000889                   PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; GJE11_09650; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
2000889..2001245                   PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; GJE11_09655; phage(gi23505459)      2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
2001242..2001568                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09660; phage(gi23505501)     2.05e-73            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
2001653..2003581                   PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE11_09665; phage(gi23505460)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
2003615..2004955                   PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; GJE11_09670; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
2004952..2006010                   PHAGE_Salmon_ST64B_NC_004313: Tail protein; GJE11_09675; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
2006010..2006543                   PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; GJE11_09680; phage(gi23505463)     2.39e-129           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
2006548..2006961                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE11_09685; phage(gi23505464)     3.87e-96            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
2006933..2007478                   PHAGE_Salmon_ST64B_NC_004313: putative head assembly protein; GJE11_09690; phage(gi23505465)     1.09e-130           SalmonellaentericasubspentericaserovarTyphimuriumMIYGANLMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGG
2007513..2008034                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE11_09695; phage(gi23505466)     2.83e-121           SalmonellaentericasubspentericaserovarTyphimuriumMERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPDDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
2008037..2008624                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE11_09700; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
2008611..2010173                   PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE11_09705; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGDGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
2010173..2010742                   PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; GJE11_09710; phage(gi23505469)     1.45e-138           SalmonellaentericasubspentericaserovarTyphimuriumMKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2011027..2012034)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE11_09715; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
2012247..2012468                   PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; GJE11_09720; phage(gi23505471)     2.83e-47            SalmonellaentericasubspentericaserovarTyphimuriumMFLLYCRGTGEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
2012785..2012797                   attR                                                                                 N/A                 CTCTCTCCGCCAC
2013099..2013260                   hypothetical protein; GJE11_09725                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2013387..2013806                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; GJE11_09730; phage(gi399528789)     2.45e-40            SalmonellaentericasubspentericaserovarTyphimuriumMEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
2013809..2015077                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; GJE11_09735; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
2015532..2015744                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE11_09740; phage(gi13095918)                   1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
2017700..2017713                   attR                                                                                 N/A                 AAAAAAAACCGGCA
2019209..2019221                   attR                                                                                 N/A                 TATGCAGGAAAAT

#### region 6 ####
complement(2123199..2123897)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; GJE11_10330; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2123921..2124577)       carbon-nitrogen hydrolase family protein; GJE11_10335                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2124685..2124915)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; GJE11_10340; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2125053..2125427                   CopC domain-containing protein YobA; GJE11_10345                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2125428..2126303                   copper homeostasis membrane protein CopD; GJE11_10350                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2126320..2126673                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; GJE11_10355; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
2127011..2127040                   attL                                                                                 N/A                 ATCCAAATCCAGTTTAACATTTCTTTTACA
complement(2127047..2127901)       PHAGE_Entero_HK022_NC_002166: integrase; GJE11_10360; phage(gi9634144)               1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(2127961..2128455)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; GJE11_10365; phage(gi985761253)     8.72e-21            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2128645..2128875                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; GJE11_10370; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2128929..2129462                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; GJE11_10375; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2129719..2129886)       lytic enzyme; GJE11_10380                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2129951..2130139)       hypothetical protein; GJE11_10385                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2130194..2130454                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; GJE11_10390; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2130612..2131493                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; GJE11_10395; phage(gi169257205)     1.04e-89            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2131590..2131790)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE11_10400; phage(gi169257211)     3.94e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2132360..2132485                   arsenic transporter; GJE11_10405                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2133160..2133306                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE11_10410; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarTyphimuriumIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(2133633..2134247)       disulfide bond formation protein B; GJE11_10415                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(2134257..2134415)       hypothetical protein; GJE11_10420                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2134548..2135462)       EamA family transporter; GJE11_10425                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2136730..2136759                   attR                                                                                 N/A                 ATCCAAATCCAGTTTAACATTTCTTTTACA
complement(2136766..2137134)       PHAGE_Entero_HK022_NC_002166: integrase; GJE11_10430; phage(gi9634144)               6.28e-24            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML

#### region 7 ####
2952893..2952907                   attL                                                                                 N/A                 GCTACATTTTTATAA
2953213..2953404                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; GJE11_14570; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2953675..2954361                   virulence protein; GJE11_14575                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
2954346..2954645                   hypothetical protein; GJE11_14580                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGAEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
2954714..2955340                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; GJE11_14585; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(2955472..2955890)       PHAGE_Stx2_c_1717_NC_011357: transposase; GJE11_14590; phage(gi209447153)            1.05e-05            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTVAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(2955988..2956956)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE11_14595; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2957102..2957428                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE11_14600; phage(gi100034)     5.49e-23            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(2957432..2958013)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; GJE11_14605; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(2958013..2960451)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE11_14610; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2960505..2960747)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14615; phage(gi169257319)     7.64e-54            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(2960786..2964136)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; GJE11_14620; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
complement(2964208..2964912)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE11_14625; phage(gi169257316)     2.31e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
complement(2964810..2965547)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE11_14630; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
complement(2965557..2966252)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE11_14635; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
2966342..2966875                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; GJE11_14640; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(2966992..2967489)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; GJE11_14645; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(2967588..2967920)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE11_14650; phage(gi169257311)     1.73e-78            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
complement(2967917..2970904)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE11_14655; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
complement(2970984..2971313)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; GJE11_14660; phage(gi169257309)     1.21e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNNELHFVRQLAREFRRPDWRRMLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
complement(2971310..2971708)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; GJE11_14665; phage(gi169257308)     1.13e-91            SalmonellaentericasubspentericaserovarTyphimuriumMFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
complement(2971754..2972503)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; GJE11_14670; phage(gi169257307)     1.68e-179           SalmonellaentericasubspentericaserovarTyphimuriumMTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
complement(2972515..2972916)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; GJE11_14675; phage(gi169257306)     6.36e-94            SalmonellaentericasubspentericaserovarTyphimuriumMTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
complement(2972913..2973479)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; GJE11_14680; phage(gi169257305)     1.52e-134           SalmonellaentericasubspentericaserovarTyphimuriumMEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
complement(2973460..2973759)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE11_14685; phage(gi169257304)     3.37e-65            SalmonellaentericasubspentericaserovarTyphimuriumMADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
complement(2973752..2974075)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE11_14690; phage(gi169257303)     8.23e-70            SalmonellaentericasubspentericaserovarTyphimuriumMAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
complement(2974166..2976247)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; GJE11_14695; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKTTVAAIKMPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
complement(2976171..2977688)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; GJE11_14700; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
complement(2977715..2977921)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE11_14705; phage(gi169257300)     1.38e-41            SalmonellaentericasubspentericaserovarTyphimuriumMTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
complement(2977918..2980056)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; GJE11_14710; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMMTTVTKGKRKSRNSLASAVVAGCDISSMFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
complement(2980013..2980546)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; GJE11_14715; phage(gi169257298)     1.44e-127           SalmonellaentericasubspentericaserovarTyphimuriumMDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
complement(2980754..2981233)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; GJE11_14720; phage(gi169257297)     3.01e-111           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
complement(2981251..2981703)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; GJE11_14725; phage(gi169257296)     2.10e-104           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
complement(2981687..2982016)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; GJE11_14730; phage(gi169257295)     1.03e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2982292..2982978                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; GJE11_14735; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2983339..2983788                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14740; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(2983924..2984049)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14745; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(2984223..2984540)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14750; phage(gi169257291)     9.70e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
complement(2984607..2985404)       PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; GJE11_14755; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2985394..2985540)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14760; phage(gi169257289)     1.27e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(2985537..2986148)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; GJE11_14765; phage(gi169257288)                 1.46e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(2986357..2986959)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14770; phage(gi169257286)     2.56e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(2987042..2987263)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; GJE11_14775; phage(gi169257285)     3.35e-46            SalmonellaentericasubspentericaserovarTyphimuriumMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
complement(2987375..2987608)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; GJE11_14780; phage(gi169257284)     4.88e-51            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(2987900..2988190)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14785; phage(gi169257283)     2.57e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
complement(2988268..2988579)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE11_14790; phage(gi169257282)     5.67e-70            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
complement(2988576..2988923)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14795; phage(gi169257281)     7.30e-80            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
complement(2988934..2989683)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; GJE11_14800; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
complement(2989686..2990669)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; GJE11_14805; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDSLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
complement(2990754..2991128)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; GJE11_14810; phage(gi169257278)     4.50e-72            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(2991094..2991333)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; GJE11_14815; phage(gi169257277)     1.53e-53            SalmonellaentericasubspentericaserovarTyphimuriumMDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
2991453..2991863                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; GJE11_14820; phage(gi169257276)     3.76e-96            SalmonellaentericasubspentericaserovarTyphimuriumMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
2991913..2992173                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14825; phage(gi169257275)     5.96e-20            SalmonellaentericasubspentericaserovarTyphimuriumMLQNRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
2992166..2992324                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14830; phage(gi169257274)     1.88e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
2992346..2992645                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14835; phage(gi169257273)     6.77e-52            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
2992772..2995657                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; GJE11_14840; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
2995620..2996777                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE11_14845; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
2996820..2997059                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE11_14850; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2997100..2997348                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; GJE11_14855; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2997393..2998685                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; GJE11_14860; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
2998720..2998734                   attR                                                                                 N/A                 GCTACATTTTTATAA
2998880..3000082                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; GJE11_14865; phage(gi100242)     2.14e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 8 ####
3069367..3070622                   PROPHAGE_Escher_CFT073: transposase insF; GJE11_15140; phage(gi26249410)             1.83e-39            SalmonellaentericasubspentericaserovarTyphimuriumMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
complement(3071085..3071543)       PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; GJE11_15145; phage(gi300116744)      1.70e-18            SalmonellaentericasubspentericaserovarTyphimuriumMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(3071735..3074011)       PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; GJE11_15150; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
complement(3074042..3074362)       PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; GJE11_15155; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumMGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
3074686..3074907                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE11_15160; phage(gi13095918)                   1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
complement(3075037..3076983)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; GJE11_15165; phage(gi371496158)      2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE

#### region 9 ####
complement(4471810..4472157)       PHAGE_Burkho_BcepMu_NC_005882: gp01; GJE11_21650; phage(gi48696911)                  2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
4472733..4473020                   PHAGE_Burkho_BcepMu_NC_005882: gp21; GJE11_21655; phage(gi48696931)                  3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4473023..4473628                   PHAGE_Pseudo_B3_NC_006548: endolysin; GJE11_21660; phage(gi56692593)                 4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
4473641..4473955                   PHAGE_Burkho_BcepMu_NC_005882: gp25; GJE11_21665; phage(gi48696935)                  1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
4474115..4474570                   PHAGE_Burkho_BcepMu_NC_005882: gp37; GJE11_21670; phage(gi48696947)                  3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
4474567..4474764                   PHAGE_Burkho_BcepMu_NC_005882: gp38; GJE11_21675; phage(gi48696948)                  2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
4474754..4476181                   PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; GJE11_21680; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
4476181..4476705                   PHAGE_Burkho_BcepMu_NC_005882: gp40; GJE11_21685; phage(gi48696950)                  6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
4476757..4477074                   PHAGE_Burkho_BcepMu_NC_005882: gp41; GJE11_21690; phage(gi48696951)                  1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
4477034..4477162                   GpE family phage tail protein; GJE11_21695                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
4477259..4479613                   PHAGE_Burkho_BcepMu_NC_005882: gp44; GJE11_21700; phage(gi48696954)                  7.55e-61            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
4479613..4480566                   PHAGE_Burkho_BcepMu_NC_005882: gp45; GJE11_21705; phage(gi48696955)                  5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
4480566..4480775                   PHAGE_Burkho_BcepMu_NC_005882: gp46; GJE11_21710; phage(gi48696956)                  6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
4480763..4481806                   PHAGE_Burkho_BcepMu_NC_005882: tail protein; GJE11_21715; phage(gi48696957)          2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
4481816..4482538                   PHAGE_Burkho_BcepMu_NC_005882: gp48; GJE11_21720; phage(gi48696958)                  3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
4482866..4483228                   PHAGE_Entero_SfV_NC_003444: putative flippase; GJE11_21725; phage(gi19549013)        2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
4483225..4484154                   PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; GJE11_21730; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
4484154..4485701                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; GJE11_21735; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
4485865..4486224                   PHAGE_Burkho_BcepMu_NC_005882: gp49; GJE11_21740; phage(gi48696959)                  3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4486215..4487330                   PHAGE_Burkho_BcepMu_NC_005882: gp50; GJE11_21745; phage(gi48696960)                  2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
4487323..4487955                   PHAGE_Burkho_BcepMu_NC_005882: gp51; GJE11_21750; phage(gi48696961)                  5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
4487958..4489703                   PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; GJE11_21755; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
4489708..4490313                   DUF4376 domain-containing protein; GJE11_21760                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
4490310..4490765                   PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; GJE11_21765; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
4491014..4491304                   hypothetical protein; GJE11_21770                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
4491501..4492229                   PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; GJE11_21775; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
