gi|00000000|ref|CP045952.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 5022086, gc%: 52.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
667791..667870                     attL                                                                                 N/A                 GAGTGGCTTAATTATATGATTTTAAAGCTAAAATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAG
complement(669775..670812)         PHAGE_Erwini_ENT90_NC_019932: phage integrase family protein; GJE10_03225; phage(gi431810942)     3.78e-155           SalmonellaentericasubspentericaserovarTyphimuriumMPVRKLDNGQWVADFYTVDRSNGKRGKRVRKKFATKGEALAFENYTLQKVEDAPWLGQGKDKRRLSDLIHLWFERHGITLRDGEKRKSAMLWADECMGSPMATEFTAQLFTAYRAKRLDGHFARTKRVTQVSPRTMNLEHAYFLAVFNELKRLGEWDAPNPLENVRQFRTEESEMAYLTGEQIDRLLEESRHSSAKDLELIVRICLSTGARWGEAEKLKRSQITAGKVTFIKTKGKRNRTIPLDPKIIAELPKKNGTLFSPCYYAFRSALERARIDLPAGQLTHVLRHTFASHFMMNGGNILVLQKILGHTDIKMTMRYAHFAPNHLEEALKLNPLNFSGKYNDN
complement(670816..671382)         PHAGE_Staphy_X2_NC_007065: ORF015; GJE10_03230; phage(gi66394685)                    3.23e-25            SalmonellaentericasubspentericaserovarTyphimuriumMIDYKTASKDQLKAEMKRLASVVSDTPFGTKKEFFHLPEILNSGEQPVAIASGMMDGNTWLITLTNKRVIFLDKGMIFGVKQVDINLNNIVSVGGKTGLMFGEIMISTSGQNYTIKNVMKGSVIPFTNLVNETRNNLNTPAQSQQEPTKATHSFDEQMSKIERLAEMKEEGILTEEEFQQQKQRILNG
complement(671399..671980)         PHAGE_Haemop_HP2_NC_003315: cI repressor; GJE10_03235; phage(gi17981818)             1.22e-26            SalmonellaentericasubspentericaserovarTyphimuriumMGKFSYRQISHSSEVLDRVIDAYGFTSKLMLADHFDMASSSLAGRYKRGGFPADMVVRCVAETGASLEWLATGQGRKFDDEELDILKMPRRKIVDGVLYDAGMYMLDKVSFLPGTPLPNTPICVLEGNNQFIVDTSFTEVYDDEWLVEIEGKTSIRTLTRIPIKKVRVSGVGMAFDCSIEDIKILGRVVLTIK
672124..672345                     PHAGE_Pseudo_phi3_NC_030940: DNA topoisomerase medium subunit; GJE10_03240; phage(gi100004)     9.14e-06            SalmonellaentericasubspentericaserovarTyphimuriumMRPNITIVIPDPYIPLDEYCRRTGMSKSTAENLISYGKLPIKPKGAQKRGLVEVNMAALTVMALSECDVSLNA
672376..672879                     PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; GJE10_03245; phage(gi418489686)     1.33e-47            SalmonellaentericasubspentericaserovarTyphimuriumMFDYQTSKHAHFDAACRAFAVEHNLEDVAAAVGMRPQILRNKLNPAQPHRLTCDELLAITDYTEDARLLDGMLGQINCLPSVPVNNATEANMQLCALSATASVGAIAGEAVSTGHMTAARRTQILDRARDAIRSLSVLAYTVESRIHSAPVLAAAVDLVTTNATGLM
672889..673116                     hypothetical protein; GJE10_03250                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKAFVTYLKKESPAMQLPSGSTGWIELPNGQRWNPGHTYKFNAHESVQMKGGSVLRFLTTKTRRLLGMVGGRYGN
673106..673531                     hypothetical protein; GJE10_03255                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAINQEQQKRGLDHLKKIRRKYFSTSSEAAEWWDNLTPEWRGVVLHAAAINSRSGVFKRSLSNCCWRELFERLEYRDMIQLRQGISRARLTFSGFGSLRDSDFSRRTAERPVKIVHPINTRNKVQMIIAPHIVHKLQQGNH
673531..673932                     hypothetical protein; GJE10_03260                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSIISVEGKSLGAELAVWGVPHNYAVAFAEKSASKNGRIALHPFFFNDTEHMTNQRHWLAINAAFWCCVYREAESKEAQIEALAGIRAIFYTAGALGVGEIKALIQEWWRTTYELHLIPAPNYSAVTTQPAFH
674000..674233                     PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; GJE10_03265; phage(gi169936057)     1.38e-06            SalmonellaentericasubspentericaserovarTyphimuriumMHMTRQDLPATKSGTDLLTMLTKATQEGKAAAADLCSIRLDKLATHAANEGLSATEIVELIREEAAAICSKGGAAWQ
674224..675084                     PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; GJE10_03270; phage(gi169936055)     4.07e-84            SalmonellaentericasubspentericaserovarTyphimuriumMAVKTPLKWVGSKARLMPQLRPHLPEGKRLVEPFAGSCAVMMNTDYDEYLIADVNPDLVNLYKAMAYHTDALLNELEILFNAGSLGDEESRAVFYYAVRDAFNQSGKSFGSESVEAAARFLYLNRHCFNGLCRYNRRGQFNVPFGKYKKPYFPADEICAFAEKAKRATFITAHYLETLDLVRDGNDVVYCDPPYLTDSDNFTAYHERGFSHMDQGRLARKLRRLAERGIQVVASNSDLEMVHYIYAGFNSVRVNAPRSVGAAAASPKMAAELILKWPLPVTPEASA
675081..677102                     PHAGE_Salmon_SEN5_NC_028701: replication protein; GJE10_03275; phage(gi966201551)     2.75e-154           SalmonellaentericasubspentericaserovarTyphimuriumMTLAINEDCYAVDAWRRETFAPGTPADVTITERRLWAINPQDHKWRAQYLHEIPDWLAGYFGRRYEKLFTGPDGRRRANTFLRQTIGGNVLPRLRKVAAHYKLAADAIDLPFGKSLERLPSLDRPELKKLAGQISGWISQSLYDFTERFDSGTDDPKELHRRTMESYRYLCACSLMLNNQPPYWAEHEANAGQLETRKAESGILRMMAPEWWYLRLKRARDVQREHMAIAVGQVQKAASAYVSRKTLGEWIEQKKRNLEFFKKFDLLNDEGLRIALDSMVHRSVANPAIRRCELMVRMRGFEDMANEEGLAGEFYTITAPSRFHAVHSKGGFVSQWDGSTPQDTQRYLCGVWAKARAAISRAGIHVFGFRVVEPHHDGTPHWHMLLFMRPQDVDTVRDILCYHARITDSEELQTPNALKARFHVEAIDPAKGSATGYIAKYISKNIDGFALDGEQDEETGENLRDMAKSVSAWASRWRIRQFQQIGGAPVTVWRELRRLRDQVLTDRRMDAVLAAADVGDWAAYTQAQGGALVARRDLVVRLVYEITEQGNEYAEDVQRVQGVYSPLVPDSEVCTRLVKWQKVAKLTEASAEAGFSGGNAAPWSSVNNCTEGGTRRRLKLELRSRGFDGSDEEIDILKRGGGLRFGQSALIYRNGRLQETQNEPMQELWPEWL
677222..677428                     hypothetical protein; GJE10_03280                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDILEASAQLERIELLAKIAHIYESNQREKTIALYWIGEIAGEMREKVSKAMKSPQKGGLSGGGSRFQ
complement(677402..677725)         PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; GJE10_03285; phage(gi17975123)     9.57e-26            SalmonellaentericasubspentericaserovarTyphimuriumMRQKRLKSRHHLTAGAWNMRVLKIECPECGSKAVIRKTNRKHRQIADIYCACSDVECGHTFVMNLTFSHTLSPSAKTGDAMVQKILNALSPDQRQMALDLLKATPAA
complement(677722..678783)         PHAGE_Haemop_HP2_NC_003315: portal vertex protein; GJE10_03290; phage(gi17981829)     5.76e-101           SalmonellaentericasubspentericaserovarTyphimuriumMSKKKHFVKRNQRGDKSKKMSIITFGKPEPVLTTGTDYRDIWYDNAADHFTQPIDRLALAQLINLNGQHGGIIHARKNMIVSDYLSGGLTYDQLEAAAFDYITFGDIALGKIRNGWGDVIGLEPLPGLYIRRRKDRNNATDQPGDYVVLQEGKPQIWPEEDIIFIKMYDPQQHIYGLPDYIGGVHSALLNSEAVIFRRRYYHNGAHTGGILYTRDPSMTDEMEEEIEQQLRDSKGIGNFSTILVNIPGGDGDAIKFIEMGDISAKDEFANIKNISAQDILNAHRFPAGLAGIVPQNTAGLGDVEKAERIYKKSEVAPVQRRFMMAVNNDPEIPENLHLNFDLSYTESTDKGAV
complement(678780..680555)         PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; GJE10_03295; phage(gi17981830)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAKYSEELKGVVRALYLRRYTPKEIASELNLPNARIVYYWAEKYNWADLLSFESTEEAIERRYQLLASRDNKTDLDLKEMDMLIAHATKLRAQSNKHKEKMASGQNSGQADARDSNDDEPRRKRKYKKNDISSLTQEDFDAWADEHLFEYQKHLRRNIGQLVRNILKSRQIGATWYFAFEAFENAVMTGDPQIFLSASKVQAEYFRSYIVNIAEQYFGITLTGNPIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFTKLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGDEWKQGSKKRTAIKFPTFDELRDGGRVCPDGQWRYVITMEDAIAGGFNLANIEKLRNRYNTATFNMLYMCVFVDSKDSVFSFSDLEACGVEVDTWQDHNPDAARPFGDRPVWGGFDPARSGDLSCFVIVAPPMFAVEKFRVLKVIYWKGMNFRYQAKQIEQLFKKYNFTYLGVDVTGIGQGVFDNIQHFAMRVAVAIRYDLNTKNQLVLKAADVVESQRIEWDKNLKEIPASFMSVRRTTTQSGNAMTFVADRSQDTGHAEAFWAITHALHNEPLNYENKPKSRWNLRNKAA
680716..681519                     PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; GJE10_03300; phage(gi17981831)     1.40e-42            SalmonellaentericasubspentericaserovarTyphimuriumMSHLKTDWLCVATEGDTVDGRIIKRQWIIDMGETYDYNHWVALIWPEHEDDYGNFGEVLEATWNDGEDGLARLYVSLCPNIRLIFANHEDQLLFFSIEPEENWRGSGRTYLKGLAVTDTPASVGTTRLRFSSRRKKLSKQGYYGCVISRDGKIKQEERMKNWQKLFGIKPKFEDETPPDDTAQGDDKLQALANAVNELEGRVAKIENQLNDVQGDVDTIAEVVDTEEFAAIRDNAKDIVKRFNDLGNKSARTPGRKISEKAGKFNFL
681581..682603                     PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; GJE10_03305; phage(gi148727153)      9.35e-115           SalmonellaentericasubspentericaserovarTyphimuriumMHLNNRARELLDGYSAGMAQQFGARDASRYFSLNNPQENALRLALLESVEFLDMLTCLDVDQLSGQVISVGSSVLHTGRSESGRFIRQVGVDGNDYSLVETDSCAALRWDLLSVWANAGKDENEFYNLVQAFTTQAFALDMLRIGFNGKSRAKTTDPEANPNGEDVNIGWHERMKALLGGNQIMTDPVVLDAAGDYKSLDAMASDLINAKIPAQFRNDPRLVVLVGADLVAAEQYRLYQAADRPTEKIAAQMLGNTIAGRPAIIPPFMPGKRMVVTPLKNLHIYTQRNTRMRKAEFVEDRKQFENKYLRNEGYAVEVPELYAAIDESAVTIGKVSEPAEG
682607..683308                     PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; GJE10_03310; phage(gi148727154)     6.75e-67            SalmonellaentericasubspentericaserovarTyphimuriumMALSPAQRHSQRIAMEQKLKRSQALETTESMHLLVKALETDVGHVRSLPTIADRIEFKRDVLLPRWVPTVEAYLESKQVYANPVFAWCVIWLFDVGELDQALEWADIAISQQQATPDQLRSNFPTFVADTMLAWAQESAGRGESIEPYFSRTFERVAGVWRLHEQVTAKWYKFAGLELLRNEDGQQTAAGVDDIETLEKADHLLAIAEKHYSKIGVRTARQTIAARVRKLTQG
683369..683857                     PHAGE_Haemop_HP2_NC_003315: packaging protein; GJE10_03315; phage(gi17981834)        3.21e-31            SalmonellaentericasubspentericaserovarTyphimuriumMETGQSAFFGGFMFSGKPLDYQDEPLANNGFWPDLNLKDFQAQRSLPPDIDADTISQALLAAVAEVNAELENVEASWKAKGHTLAADVPGVKMGGLNSLCAQYMKAVFARAKADLLGEFATIGRRDTHPGQESQETRAGLLAEASVVIRRMKGLKRATVKKV
683854..684360                     PHAGE_Haemop_HP2_NC_003315: orf21; GJE10_03320; phage(gi17981835)                    8.90e-15            SalmonellaentericasubspentericaserovarTyphimuriumMSQTQIQSLTAFFQENVPPRAMQSFDSVLDEMKFIPAAKDYGLGQYRQAVIRYDAVLSWARFPYRLCPPQLLMSLLAAWLDDADRDLLDEVGLSEAEPDWDVSVEDEETATVVLTVPMAEELVIRQDENGAIPWRGERWSLADPEIWTALTASIFSVDETGAPVSGEI
684357..685064                     PHAGE_Haemop_HP2_NC_003315: orf22; GJE10_03325; phage(gi17981836)                    2.91e-12            SalmonellaentericasubspentericaserovarTyphimuriumMIAGGELNKKQLTELRKALASMELPPQKRQRLIWRLAKYGVIAAAKRHVRNQESPDGQKWPGRKTKRKGKMLRNLPKLLHIREMPEIQAVRIYLQGGGYRNGEAPVPAGTVGYAQQNGMRVKVSRRSQPRKADAGKMATPAQAKKLRALGYRVRTGKRWKKPTLGDITRTMPYSQAGLLIRKLSGKAVKTSWTVDLPARVFLGMNDDEFDKALARQLQAIGFGWNVKAQDIKGKT
685061..686188                     PHAGE_Haemop_HP2_NC_003315: tail sheath; GJE10_03330; phage(gi17981837)              7.35e-139           SalmonellaentericasubspentericaserovarTyphimuriumMTWPTVTVNQVNQLLGETNEVERTLLFIGTGTKNVGKTLAVNAQSDFNALLGEGNSPLKSDVLAAMANAGQNWWGFVHVLAADSEPGAWVDAVKAAQVSCSVEGVVLSDDVAAKEQINQAATLRSELIAQYGRWVWFILAVQGMQEDEAQADYLKRLSTLQQGIAEKAVQLVPRLWGNEPGVLAGRLCNRAVTVADSPARVKTGALLNLGSDELPEDGTGKTLELATLKALEAQRYSVPMWYPDYDGFYWADGRTLDVEGGDYQSIETLRIVDKAARRVRLLAIGKIADRSLNSTPGSIAAHQTLFARPLREMSTAANINGVSFPGEVKPPQDGDVSIVWKSKKAVDIYIVVRTYEVPLQITISLLLDASLEAAA
686185..686640                     PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; GJE10_03335; phage(gi148727159)     1.02e-63            SalmonellaentericasubspentericaserovarTyphimuriumMTKRISGMSFDAYIDGELIHIEKISLDITDNSAAAQTRGVPDGHVDGDVAAEGEIEVSSKVLQVLTAKARAAGSWRGIEPLDFLFYAKAGSEEVKVETFGNKLQLSNLLDIDPKGGSVSTHKIKYFVTSPKFVNINGVPYLEAEATENLIG
686650..686943                     PHAGE_Burkho_KS9_NC_013055: holin gp22; GJE10_03340; phage(gi255033753)              6.34e-20            SalmonellaentericasubspentericaserovarTyphimuriumMQDYEKGFIALAIMGALIALGKMLNSDEPITARLVLGRVIVGSALSVAAGVALYFVPDIHPLALAGIGSALGILGLNGVEAWLRKKGIGFLGKGADK
686940..687281                     PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; GJE10_03345; phage(gi48697087)     4.94e-32            SalmonellaentericasubspentericaserovarTyphimuriumMTLSEKQQLFTVMVANLIHWAEEHGYRLTFGEAYRTPEQAALNAKKGSGITNSLHTRRLAVDFNLFVNGQYQTRTEDYLPLGEYWESLGGSWGGRFKSRPDGNHFSLEHDGVR
687281..687613                     PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; GJE10_03350; phage(gi219681271)     2.05e-11            SalmonellaentericasubspentericaserovarTyphimuriumMDRVVAGWLMTVVLAFWAGWKAANWQRDSIDLAISRSASATGETLASMASESGRKLEEQLEALKNAPPREIRTEVVKPVFTNVCLSDDFVRMYNDAAASTERALSGKPEN
687760..688017                     PHAGE_Haemop_HP2_NC_003315: orf26; GJE10_03355; phage(gi17981842)                    1.61e-18            SalmonellaentericasubspentericaserovarTyphimuriumMEKIKLCVCGTDIIFEPNQTAYNKFINEMAMDNKVAPAHNYLTRIVATESKEALAEILKRPGAALQLVSKVNDIYAPELEIEVKN
688205..690175                     PHAGE_Haemop_HP2_NC_003315: orf27; GJE10_03360; phage(gi17981843)                    3.70e-82            SalmonellaentericasubspentericaserovarTyphimuriumMKQLDFTLSLIDKLSRPLKQAQSSVTGFAEKSKAAFMQIGGGVLALAGTGMAIRGALSPAVEMYDALNDAAAKGIDDQALKAVQRDALRFSTTYGASAVEFVQSTESINSAIAGLAGNELPKVTKVANTLAFALKSTAAETAEFMGQMFGNFSADAERLGKVQFAEQLAGKMVYMRKVFGTEMGTIKDLMEGARGVGTNYGVGLDEQLAVLGQLNRTLGTEASSAYEGFMTGAVEGAKKLGLSFTDATGKMLSMPEMLIKLQGKYGKSLEGNLKAQAELDAAFGDSSAVVKHLYGNVALLQRNITELGGSDGLKRTQEMASKLVKPWDRFVQILKAIQTVIGLTLIPVLYPVLNRLADMGQTFARWMQLFPNIARVIGYAAMALLGFAAVGAVANIVMGASKFIMAGLRGIWVAMTAVTKAYTAMVWLAQIAVIAWNATLKFLRGALLAVRMAAIMAGIGINLMSWPVLLVIGAIALLAAGCWLLIKHWDTVKAAVMETSAFQACARVVAWLAGVFSTAWQFISEGWNSFIALLTGFSPSQALSGLASGIVSMFDNVWQSVKGGFLKSWNWIVEKLNKIPGVDISMANETSSPPLTVNNLSTGGELKGIDKGGISKSVSNNSGSVTDNSRKINTVNIYPKEMITPGQLMEFQELGV
690172..690501                     PHAGE_Haemop_HP2_NC_003315: orf28; GJE10_03365; phage(gi17981844)                    4.63e-35            SalmonellaentericasubspentericaserovarTyphimuriumMNEILYVDLLIQGNDFVLNTGNEPELCNNRKSIGQDIIHSIIESGLATELIAERSPTMRADIFTRMELLIEDDERIVPGTVEIGEESRTRLWITASTYDFGGISVQVDL
690498..691681                     PHAGE_Haemop_HP2_NC_003315: orf29; GJE10_03370; phage(gi17981845)                    3.04e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTEKPQVDFEEVVKASGMPVTEEEIRDRFNAIATEEGIITNTSRMSPFWRLVTAIVTAPVMWLKEVLISTVLANMFVATASGSMLRLLAWAVNITPKPASAAQGVIRFYKEDASAVVTVKAGTVIQTERINGRVYELAITEDVVIASGTASALLPVKATERAAHITLRRDITAFCRWPWTASAMWPVKRTGPYRARMRKAMMSCVSVAVTSLTWWATTTRTRCTGRPVLPDALTGFSLSTKHRGGRGQPTPIYCWTAAWLLRRLWMPMTISTRRGITATGTICSVMPCRKPCTIWRSLSGSGTTTSVMMNRSARTVLKTSGAPSGKIRTMTSEGRGRIHGSPSRSWGAKSIKTFRRNRIFRWMTLPVSMCRVNRLWVLRMNGA
691674..692261                     PHAGE_Haemop_HP2_NC_003315: orf30; GJE10_03375; phage(gi17981846)                    3.53e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNEFMKKLAGMVLPSWMDRGEPRKLLQTARRFWVEVYGWVTWPLNQFDPLTCTPALLNLLAYDRDISRFDGEPLELFRRRVAYAFVNARDAGSVEGFISIFERLGIGYVELLERQPGIDWDVIQVRVTDSQIATNTQLMIQIIRQYGRTCRRYQFEVITSEQLAIRAGWDQGEYVVYPAVLSGTETSSATYSAGL
692271..694504                     PHAGE_Haemop_HP2_NC_003315: tail fibers; GJE10_03380; phage(gi17981847)              8.00e-57            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTITRAFEQWKAQQGATGEPVLLDEFVFANVPGLEPDRPVDRNETLPPAEQIVHRQAVSRKGVVNDNAVVHSVVLGADVGDFSFNWIGLLNKASGTLAMIVHAPLQQKLKTAEGQQGNVLTRSFLMEYNGAQAETGINTPAESWQIDFTARMAGMDERQRLENIDIFGAAAFFGDGYLVGKSGNQFYVTKGTGYVAGLRTTLAENLNITVTTRPVKVWLDVCWTGTLTSVWGVQSRITVADNPRIMCRTAYSIMCLQWRVLMKTAILRIYARKGRMSSRPAMRENMNNPVTIRTPQPAKKGLCSAVIRTVSRRCWPQRRKRLKRLWIMRTDDWRKTVMAAIFRTKNNLRELSARRRPPLHLANQAGSKSPRLCRSPHQQRLSFMEVRGITLDHLSKRQSVNWYCVPVMVHLLEPPHYGGVHLLLLTRSHGLIHQATPTIFILISASMRTGLRNMITPVMQMSRYTVRLNIHQHSRETQPAVRHIRCITANLQPVTLRHCRLMEDGTVRALVLIMRLAGIRLYLAIMTPDLSGTVTVFWVFMPIMLWSVISTIPGCTCQMFSLMVPFAQVTQKNCHRAITTQHLPRSIYGATQTDLPLNWTTTRGGTCTASEILMVRLSLRSMEISPLTHFVQVEPSIRITATSLVRCGEMAGVPGFTTMKRSDLAPWRFLAVCGVIFSLAADRWRGSILTVAGKWKVMMTRFITVPFSILVIRGQPQVYAA
694517..695071                     PHAGE_Salmon_SP_004_NC_021774: tail fiber assembly protein; GJE10_03385; phage(gi526003632)     2.09e-119           SalmonellaentericasubspentericaserovarTyphimuriumMKVAKNKKNEQFLNIKKFIPYTPEPEEALFPGGAHLKSEDGQDWYKCQKLFSEDTLKITYDDNDVITCITRDISGLWPAGQSVAELPDTDENRRADISGGWQFKDGKVVQRVYSPEELSKKAEAEKVRRLAEAESAIAPLVRAVKLKIATDEEMKRLKAWELYSVMVNRVDTASPDWPEVPDVA
695061..695786                     PHAGE_Haemop_HP2_NC_003315: orf33; GJE10_03390; phage(gi17981849)                    8.12e-15            SalmonellaentericasubspentericaserovarTyphimuriumMWREARLAFTDSLAALDCSVVPAHPWIHGLGQQTDNGAYLSPVNAIHYLAERLAGTGGNTDVVIMMVTGQTHENFMKGLNSLVDVFPAPAFTQVRRLAESAATLATEKMQIPAKVGAGLPVAIPLSVPTSRAALSAAAVSEAQKAAGAGFSLDGLKQQLGEFTQLRDSLINDVASGLADLQGKSARAWVFTASGDTAATLLALVKDIPQPSAVYTAAIMLAGKNLDGIRGMIHDVDPDTGA
695758..696303                     PHAGE_Haemop_HP2_NC_003315: orf34; GJE10_03395; phage(gi17981850)                    6.01e-27            SalmonellaentericasubspentericaserovarTyphimuriumMTSIPTLALNGEAILLKNMRVTVSQQFQDKDQSGQTSATTKSEQGAKGKELRISGEIPFKNPEILKRIFELASATDADGKRMKYRVAHEVARAVNFREATFSGMLDAPPQDGKMARLVTFTTGGTCQRTGEAGSRATGKTTAKKQTASSTGQSGGQSAGEDEEKLTWFERRVLKPVNDALG
699761..699840                     attR                                                                                 N/A                 GAGTGGCTTAATTATATGATTTTAAAGCTAAAATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAG

#### region 2 ####
1224528..1224543                   attL                                                                                 N/A                 AAAACGCGCCCGAAGG
complement(1224633..1225652)       PHAGE_Escher_pro483_NC_028943: integrase; GJE10_05945; phage(gi971758501)            2.35e-139           SalmonellaentericasubspentericaserovarTyphimuriumMIQMSEGFAMSIKKLDDGRYEVDVRPRGTSGKRIRRKFNRKSEAQTYEKYVLTNFHDKEWQDKPADRRLLSDLIALWWSYHGKNHNYGDSYKKRLEKINREMGEPRVYELTRNFLMKYRASRLHDGVSAGTVNRDFCTMSSMFRLLIDMEEFHHENPFHKVRKLRLENTEMSFLSEEEIRDLLMALTGDDRRVVVLCLNTGARWGEASNLKAEHVISNRVTFVKTKTGPARTVPISQEIADYILTRKSGKLFDTNYERVRDVLRKVKPDLPRGQALHVLRHTFATHFMINGGNIITLQRILGHTTIEQTMTYAHFAPDYLSDAIRFNPMRGSVQIMSTN
complement(1225692..1225997)       PHAGE_Salmon_SEN5_NC_028701: repressor protein C; GJE10_05950; phage(gi966201589)     5.80e-23            SalmonellaentericasubspentericaserovarTyphimuriumMTNSSSAGKKIQLIRKAEGLSRSQLSEIIGISYNTLTNYEVKGIQMTEGNLMLFTQHPRFEKYTLWLMTGKTAPAAGQVAPSLSPDGQDDKKSSHSTQKAG
1226095..1226433                   PHAGE_Escher_pro483_NC_028943: ribosomal protein S15P/S13E; GJE10_05955; phage(gi971758503)     3.98e-21            SalmonellaentericasubspentericaserovarTyphimuriumMKELSENEISLLVTPELFATYIGKTPSAIRKMASANKLPVVRMKDPDNPSKKGGEIYIHRGEWDDYAAYLAQSAPPEWHNWKNRLFTSEPGIFKEWAKRVFTTSKTTSHSKK
1226459..1226791                   hypothetical protein; GJE10_05960                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKAKYATLIRSLLRTYREQASAIEKESFSVHSDGIQLMELNLKLAKCLEGMSLMARFNNEFEDYCELHEITMMAFNGSIPVDDNIPGLISLASCTVKNNKSAVQLTAVKR
1226801..1227370                   PHAGE_Entero_mEp460_NC_019716: putative exonuclease; GJE10_05965; phage(gi428782342)     2.31e-54            SalmonellaentericasubspentericaserovarTyphimuriumMKHLMIDLETMDNKPTAAITAIGAVLFNPETGEMGETFYRRISLTSSVDYDCTMGADTVLWWLRQSIEAKSEIINDANCPLDTAISDLFHFICELTDAHHLQVWGNGSSFDNVILRHAANKVGLLSPMWNYWNDRDVRTVSALAKDLGLNINNIIKFEGVKHHALYDAIHQAKIVSYVWTYLMKIASVK
1227373..1227591                   hypothetical protein; GJE10_05970                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLTVTSHASESVINKAFSVLTEYYNGKKVYQVIKPNHYFSVHVSYRWRLLSKNKGRDWELMTHERYNKQYKI
1227630..1230287                   PHAGE_Ralsto_RSY1_NC_025115: hypothetical protein; GJE10_05975; phage(gi691326897)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNATIQRDVVRRLVRDFEFKEKDKYLQQGICPACHKRELFTSIEKPWILKCGRENNCGHQVVVKELYSDIFEDWSRRYQDTPETPHAAAEAYLREARGLNTEPLKGSFTQGAFVKDGMGSATVRFKLSCGAMWERIIDQPQRFGKQKANIKGSYVGHWWVPPFINLLEVNEIWITEGIFNALSLCQAGLTAVATLSSNNYPLAALDTLAKELGEKPRPRLVWAFDGDKAGTKHTLAFAARSDAAGWKTRAAQPVKSSSCLDWNDLLLRDRFSKSDIKNYRYYGDLLLAKSPTEKAILMHQHNEWHSFYFEYGSRMYWFELDLDRYTRALDRITNTGTEVIQEWEAREKAVKESGCITEIANCWLTPLYFQRSEPTDESWYYVKVNMPNRPAVKDTFTANQLTSSAEFKKRLLHIAKGAVYTGSTKQLDKFIQMRLPEIKEVKTQNFIGYNKDYSAWLFNRVAVCDGRLYEMNDEDYFEINHASVKSLSLTPVLDLNPKLDEFTTGWIDDIWTAFGEKGYVALAFWLGSLFAEQIRERDKSFPFLEIVGEPGTGKSTLIEFLWKLAGREEYEGFDPSKSTAAARGRNFAQVSNLPVVLIEGDRTTDNAKQRAFDWDELKSLYNGRASRAVGIKSNNNETYEPPFRGSIVIAQNADTDGSKAFLERIIHIYTDKRGQSIQTRHAAERLEQIPVSRVSGFTLLAAMREKEIMDTFSRSYERARNELESDADIRHIRIAKNHAQLAGLLDALAIVVPLPVERIEKTRTAITALAVERCQALKKDHPMVQEFWELFDYLDELAPYGINHSSDENEIAVNFNHMEEVAAAHRQRIPFTLTEIKKLLKNGNERRFIRQGTTRSAVSERHNRGKGDMSRMPETFRCWIFGREK
complement(1230315..1230638)       PHAGE_Aeromo_phiO18P_NC_009542: hypothetical protein; GJE10_05980; phage(gi148727148)     2.47e-23            SalmonellaentericasubspentericaserovarTyphimuriumMSRKRLKYQRFQINGARDMRVLKVKCPECGAKAVIRKTNPKHPHISDIYCACTDVECGHTFVLNLTFSHTLSPSAKTGDMMLQTIINSFSPEQKQMTLDLLKASLAA
complement(1230638..1231657)       PHAGE_Haemop_HP2_NC_003315: portal vertex protein; GJE10_05985; phage(gi17981829)     3.06e-101           SalmonellaentericasubspentericaserovarTyphimuriumMKKRKYRERRTVTRQRHMSLITLGKPEPILTTGTNYTDVWYDNEAEHWTLPIDRLALAQLVNLNAQHGGVLYARRNMVTANYDGGGLTHEQLGAAVFDWLTFGDVAILKVRNGWGDVIALYPLPALYTRQRKTGEFVVLQQGEPVIYPPEDIIFLRQYDPQQAIYGLPDYISGIHSAMLNGEATIFRRRYYHNGGHTGGMIYCNDPNMTDEVEEEIIQKLEQSKGIGNFSTMFVNIPKGDPDGIKFIPIGDISAKDEFQNIKSISAQDVLTAHRFPAGLAGIIPTNGAIMGDIEKAAKTYRKAEILPIQRMFSAAVAQESDVPPHLYLNFLKDSELEGD
complement(1231654..1233438)       PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; GJE10_05990; phage(gi17981830)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAKYSEELKGVARALYLKRYTPQEIADELNLPNRRIVYYWAEKYCWAELLSHESTEDALNRRIQSLTLREGKSELELRELDSLVSHLVKLRAQHNKHQEKLAEIKHSESDAPASRQSCGDEKPRKRGKYKKNDISHLTQEDFDRFALEHLFGYQKHLRDNLHQQIRNILKSRQIGATWYFSIEAFENAVMTGDPQIFLSASKAQAEVFRSYIVNIAEQYFGVELTGNTIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFAKLNEVASAMATHDKWRTTYFSTPSSKTHQAYPFWTGEEWKRGDKKRARVAFPTEKELRDGGRLCPDGQWRYIITLEDAIAGGFNLASIDKLRNRYNRDTFNMLYMCVFVDSKDSVFSFSHVERCCVDPDIWEDHDENLPRPFGNREVWAGYDPARSGDTSTFVIIAPPIVAGEKFRVLRVFHWQGMNWKWQAAQIKKLFGQYNMTYIGIDITGLGSGVFEDVQHFAMRQAVAIRYGVETKNRLVMKMIDVIEDNRVEWDKEKTEIAASFMTIRRTSTASGNAMTFVADRTAETGHADSFWAIAHAIDNEPLNFENQRKSRWGNLGKAA
1233496..1234485                   PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; GJE10_05995; phage(gi17981831)     5.88e-47            SalmonellaentericasubspentericaserovarTyphimuriumMYELFSNLVFFFENNFVDIRISDITELFRNEVNAEANFIGDTENRSRKGGNMSASQLATNWICIATAGETVDKRAIEEQWLLDAAELYDPSLYTALLWPEHSRNFGNMGEVLELKAERDDEGILRLYARLCPGISLLQANANGQLLFLSPEFTPDGNFRNTGKTYLEGLAVTDSPAGVSTTRLRFSRTKGKRIGPYKPLAFDEVREFKKEKGMSKAKKGWRHFFSIEEPEATAEQETSQPDALQALAEALDAIDKRVSAIETRLGEAEEAVSDVQEDVDTVKEVVDTEDFARLVGNLPELVKNFSKLNSKVTQLPDKKFSKGKKGFNFL
1234520..1235548                   PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; GJE10_06000; phage(gi148727153)      9.70e-125           SalmonellaentericasubspentericaserovarTyphimuriumMQLNAKAREFLRQYHNGLRESYGATDDDRWFALSDPKETQMRNALLEESSFLNLLTVADVDQLQGQVVPVGSSGLYTGRVLDGRFRKKVGVSGNDYRLVETDSCAALTWQLLSVWANAGDENEFFQRVQEFTNQAFALDMLRIGFNGTKVAETTNAETNPNGEDVNKGWHQIVKEWKDGQQIITDKVVLDGDGKGDYVSLDAMASDLINAKIPAQYRNDPRLVVLVGADLVAAESFRLYQKADKPTEKIAAQLLSDSIAGRTAYVPPFMPGKRMIVTTLPNLHIYTQRGTRQRKAEFVEDRKQYENKYLRNEGYAVEYPELYAAFDESAVTIGATAAPSAGA
1235560..1236258                   PHAGE_Haemop_HP2_NC_003315: terminase endonuclease subunit; GJE10_06005; phage(gi17981833)     2.68e-44            SalmonellaentericasubspentericaserovarTyphimuriumMQLSPAQRHSARIAAERLLRQQQSLDSETSLHVQIAALEKDVAAAAAISNRAERMEFKRDVLLPRWMPTAQTWLESDSMHQNPVFAWCVIWLFDTGQFDQALDWADVAIERGQETPAAFGSAFPVFVADTVLAWAETEAAQGQDVEPYFSRTLGNVMQHWNVYEVIKAKYVKFAGLHLLRDENGEPRAAATEDRDVLLRAKDLLEQAKGFDPKCGVGTMLQRIAARLRALDK
1236357..1236809                   PHAGE_Haemop_HP2_NC_003315: packaging protein; GJE10_06010; phage(gi17981834)        9.45e-37            SalmonellaentericasubspentericaserovarTyphimuriumMFSGTAIDFDDAILTNDGFWPDLSVKDFQSQRAIPADIDAATIRQALLTAAGEINDDLVRVVADCRLSGHASAADVPGVEIDGENLLCARYRKAVFARAKADLMGEFASVGRRESHPGQESDETRSSLIAESTLAVRRIKGLKRITVAMI
1236806..1237288                   PHAGE_Haemop_HP2_NC_003315: orf21; GJE10_06015; phage(gi17981835)                    6.06e-18            SalmonellaentericasubspentericaserovarTyphimuriumMSQLTELTDFLIANMPRRAMQGFDSQMDEIAFIPAQRDTGLGQYRIAIIRYNAVLTWERYPYREYDPKILMALFMSWLCQDERALFEETGIDAELPEFDIETIDQETAIMVVTLPMVEELNLIPDPKGQIPFDGQRWKLANPEVWTADEVTVIPVNEGDG
1237285..1237989                   PHAGE_Haemop_HP2_NC_003315: orf22; GJE10_06020; phage(gi17981836)                    3.42e-13            SalmonellaentericasubspentericaserovarTyphimuriumMINGELNQEQFRQLQEALKKLDLPPARRRRLLWRMAKYGVEAAAKRNVRNQQSPEGDKWQGRQTRRKGKMLRNMPKLIRIREMPETDSVRLYLAGGHYRNAKGNLPAGVVGYVQQNGMSVTVNRRQVEGREQGDKPASLRQAKRLRKAGYKVRRGKRWRKPGYKEIQEKMTARQAGLLIRILEDKPVKTSWQIDLPARAFLGIGQDDFNRALARQLQAIGFGWDVNAQDIRGRA
1237986..1239114                   PHAGE_Haemop_HP2_NC_003315: tail sheath; GJE10_06025; phage(gi17981837)              2.74e-28            SalmonellaentericasubspentericaserovarTyphimuriumMTWPIVTVNQVNQLLGETKEVERTLLFIGTGTKNVGKTLAVNAQSDFNALLGEGNSPLKSDVLAALANAGQNWWGFVHVLAADSEPGAWVDAVKAAQVSCSVEGVVLSDDVAAKEQINRAATLRSELIAQYGRWVWFIPAVQGMQEDEARGGLSETSVHPSAGYCRESGSAGSASVGETGRAGRSPVPGGDGGQPGEGENRAVTESGQRTTGRWHRENTGAGHPSAGSAALQRADVVSGLRFLLGRTYAGCGRGGLSVHDATYCGQGRPSCPSAGYRDCRSLPEQYTGKHCRTPDAVCPSAANVHGGQHRCVISGRSEATAGRRDHCLEEQKGGGYLHCGAYVSTTANHHQSVTGCESGGQRMA
1239111..1239566                   PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; GJE10_06030; phage(gi148727159)     1.54e-61            SalmonellaentericasubspentericaserovarTyphimuriumMTKRISGMSFDVYVDGDLIHIEKISLDITDNSAAAQTRGVPDGYVDGDVAAEGEIEVSSKVLQVLTAKARSAGSWRGIPPVDFLFYAKAGSEEMKVETFGNKLQLNSVLDVDPKGSSVSTHKIKYFVTSPKFVNINGVPYLEAEATENLVG
1239579..1239875                   PHAGE_Burkho_KS9_NC_013055: holin gp22; GJE10_06035; phage(gi255033753)              8.70e-22            SalmonellaentericasubspentericaserovarTyphimuriumMQDYEKGFIALVVMGGLIALGKLLNSDEPITLRLVAGRVIVGAGLSVIAGVALYFVPNIHPLALLGFGSGLGILGQNVVEAWLRKRGFAGILGKGVTK
1239872..1240213                   PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; GJE10_06040; phage(gi48697087)     8.83e-32            SalmonellaentericasubspentericaserovarTyphimuriumMTLSEKQQLFTIMVANLIHWAEEHGYRLTFGEAYRTPEQAALNAKKGSGISNSLHTRRLAVDFNLFINGQYQTRTEDYLPLGEYWESLGGSWGGRFKSRPDGNHFSLEHDGVR
1240213..1240545                   PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; GJE10_06045; phage(gi219681271)     1.32e-10            SalmonellaentericasubspentericaserovarTyphimuriumMERVVAGWLVTVVLAFWAGWKAANWQRDSIDLAISRSASATGETLASVAGESGRKLEEQLEALKNAPPREIRTEVVKPVFTNVCLSDDFVRMYNDAVTSTERTLSGKPEN
1240692..1240949                   PHAGE_Haemop_HP2_NC_003315: orf26; GJE10_06050; phage(gi17981842)                    2.97e-16            SalmonellaentericasubspentericaserovarTyphimuriumMEKINLVVCKKEITFEPNQTAYNKFINEMAMDNKVAPAHSYLMRIVVPECKEALEDILKRPGAALQLAGKINELYAPELEIEVKN
1241137..1243104                   PHAGE_Haemop_HP2_NC_003315: orf27; GJE10_06055; phage(gi17981843)                    7.38e-84            SalmonellaentericasubspentericaserovarTyphimuriumMKQLDFTLSLIDKLTRPLKQVQSSVTGFAEKSKAAFTQIGGGALALAGTGMAIKGALSPAIEMYDALNDAAAKGIDDQALKAVQRDALRFSMTYGASAVEFVKSTENINASIAGLAGNELPKVTKVANTLAFALRSTSAETAEFMGQMFGNFSADAERLGKVQFAEQLAGKMVYMRKVFGTEMGTIKDLMEGARGVGTNYGVGLDEQLAVLGQLNRTLGTEASSAYEGFMTGAIEGGKKLGLSFTDATGKMLSMPEMLIKLQGKYGKSLEGNLKAQAELDAAFGDSSAVVKHLYGNVALLQRNITELGGSDGLKRTQEMAGKLVKPWDRFVQILKSVQTVIGLTLIPVLYPVLNRLADMGQTFARWMQLFPNIARVIGYAAMALLGFAAAGAIANIVLGVSKLIKLGAIALWKTLTSVTKIYTATVWIASKAVAAWNLTLKFLRGTLLAVRMAAIMAGIGINLMSWPVLLVIGAIGLLAAGCYLLIKHWDDVQAAVMNTAAFTAVAGVVEWLAGVFSTAWQWIKDGWNGFINLLTGFSPSQALSGMAGGIVSMFDNIWQSVKGSFLKSWNWIVEKLNKIPGVNISLANESPPALTTNTLSTGGELKGIDKGGINKSISNNSRAVTDNSRKINTVNIYPKEMITPGQLMEFQELGV
1243101..1243430                   PHAGE_Haemop_HP2_NC_003315: orf28; GJE10_06060; phage(gi17981844)                    4.63e-35            SalmonellaentericasubspentericaserovarTyphimuriumMNEILYVDLLIQGNDFVLNTGNEPELCNNRKSIGQDIIHSIIESGLATELIAERSPTMRADIFTRMELLIEDDERIVPGTVEIGEESRTRLWITASTYDFGGISVQVDL
1243427..1244611                   PHAGE_Haemop_HP2_NC_003315: orf29; GJE10_06065; phage(gi17981845)                    5.21e-147           SalmonellaentericasubspentericaserovarTyphimuriumMTEKPQVDFEEVVKASGMPVTEEEIRDRFNTIATEEGIITNTSRMSPFWRLVTAIVTAPVMWLKEVLISTVLANMFVATASGSMLRLLAWAVNITPKPASAAQGVIRFYKEDASAVVTVKAGTVIQTERINGRVYELAITEDVVIASGTASALLPVKATGTGGAYNLAPGYYRILPVAVDGISHVASEENWLTVPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIAGVAGLSIDRIFFEHEAPRGPGTANAYLLLDSGVASAPFVDAVNDYINTQGHHGHGDDMQCYAMPETLHDLAVTVWVRNLNNISDDEQKRLKDGIENLIRCAFRENTDYDVRRTWPYSRFSFSQLGREIHKNFPVTESLNFSLDDIASELNVPRLKSLVVSIENE
1244604..1245191                   PHAGE_Haemop_HP2_NC_003315: orf30; GJE10_06070; phage(gi17981846)                    1.29e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNEFMKKLAGMVLPSWMDRGEPRKLLQTARRFWAEVYGWVTWPLNQFDPLTCTPALLNLLAYDRDISRFDGEPLELFRRRVAYAFVNARDAGSVEGFISIFERMGIGYVELMERQPGIDWDVIQVRVTDSQIATNTQLMIQIIRQYGRTCRRYQFEVITSERLTIRAGWDQGEYVVYPAALSGTETSSATYSAGL
1245201..1247213                   PHAGE_Haemop_HP2_NC_003315: tail fibers; GJE10_06075; phage(gi17981847)              6.39e-76            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTITLAFEQWKAQQGTTGEPVLLDEFVFANVPALDPDQPVDRNETLPPAEQIVHRQAVSRKGVVNDNAVVHSVVLGADVGDFSFNWIGLINKASGTLAMIVHAPLQQKLKTAEGQQGNVLTRSFLMEYNGAQAETGINTPAETWQIDFTARMAGMDERQRLENIDIFGAAAFFGDGYLVGKSGNQFYVTKGTGYVAGLRTTLAENLNITVTTRPVKVWLDVCWTGTLTSVWGVQSRITVADNLADYVQNGVQHYVFAVAGIDENGNITDLRPKGTLNEQQASDALRKHEQSRNHPDATTSAKGFTQLSSATDSTSEEQAATPKAVKIAMDNAAARLAKDRNGSDIPDKPLFVQNIGLGNVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGAGITSWRHVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDSAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGNAIFNKNGDVYGDIWGTGSGPGWLSAYIAGRPLRQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGT
1247216..1247746                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE10_06080; phage(gi100034)     8.34e-18            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKKFTKTTELTPVQQELSENCSVQFIHDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVELADTDIPDGFQAGNFTYSNGVIAPVQVDYVALATAERDRRMASVTSKINQLMEAQDDSDITDAELVELSDLREVRTKLRRLDLTGAPDIDWPEVPDVA
1247736..1248461                   PHAGE_Haemop_HP2_NC_003315: orf33; GJE10_06085; phage(gi17981849)                    1.39e-15            SalmonellaentericasubspentericaserovarTyphimuriumMWREARLAFTDSLAALDCSVVPAHPWIHGLGQQTDNGAYLSPVNAIHYLAERLAGTGGNTDVVIMMVTGQTHENFMKGLNSLVDVFPAPAFTQVRRLAESAATLATEKMQIPAKAGAGLPVAIPLSVPTSRAALSAAAISEAQKAAGAGFSLDGLKQQLGEFTQLRDSLINDVASGLADLQGKSARAWVFTASGDTAATLLALVKDIPQPSAVYTAAIMLAGKNLDGIRGMIHDVDPDTGA
1248433..1248979                   PHAGE_Haemop_HP2_NC_003315: orf34; GJE10_06090; phage(gi17981850)                    3.00e-12            SalmonellaentericasubspentericaserovarTyphimuriumMTSIPTLALNGEAILLKNMRVTVSQQFQDKDQSGQTSATTKSEQGAKGKELRISGEIPFKNPEILKRIFTGQRHRCRRETHEIPRCAGGQSGEFSGHLQRNAGCTAAGRENGLAGHVHPGGTCQRTGEAGSQGNRNNGKKTDGQQYGTIRWPECRRGRKTDVVTQGAEARQCFRLA
1255124..1255139                   attR                                                                                 N/A                 AAAACGCGCCCGAAGG

#### region 3 ####
1283162..1283737                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; GJE10_06240; phage(gi712913000)     1.52e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
1283769..1284419                   anti-sigma-E factor RseA; GJE10_06245                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1284419..1285375                   sigma-E factor regulatory protein RseB; GJE10_06250                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
1285372..1285851                   SoxR-reducing system protein RseC; GJE10_06255                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
1286102..1286114                   attL                                                                                 N/A                 TATGAAGAACATA
1286349..1287578                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; GJE10_06260; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(1287556..1287840)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06265; phage(gi169257265)     2.94e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(1287881..1288120)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06270; phage(gi169257264)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1288163..1288699)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; GJE10_06275; phage(gi169257263)                 2.40e-122           SalmonellaentericasubspentericaserovarTyphimuriumMAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTGTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYRVNAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
complement(1288707..1289321)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; GJE10_06280; phage(gi169257263)                 3.24e-118           SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHTVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTGTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITQGRTSLPLRRCYPQFSAMGFKP
complement(1289284..1292210)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; GJE10_06285; phage(gi169257262)     9.13e-110           SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTRTQIPGVTLPSSEAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKRNSASRNGHRFICPEPAACRRECSVQESHTHSQNSECRKNIPCRWKNSTGDCYPVPNMVRDGAYRSRFARGVGERQPCIGYSTHKRRQRWRWQDPPLRTYSRYSGRRDCNGHFAYGLYLATWQRLPSRKRNRKEKGKSVQRMVRSTSRNARYPGLFPRRYFRADPKRAPVLSLPRTPSGVYQRQLNGDSREPHRGSSHGCPTHSGKRRGRRSQPTACRRARICGRHQRPERPKMGEDRDKPADHRTTGKCWQRYFRRVRFNAELINSWHRNESGDHQQCAGSKSQKTGWCGAGRRRRSGYWRSSYRREPESGDAPEQRFCEPITGATKRTGIATRRARSSPAGILRAGPLRCTKRGLPRRQRDQLNSGERCSRVADVLRASRREDYRQRALSSAYGQPGTCSGSTAGKPRSGVQRRAGDPGCFHHHRHPARVHRRAQRQPASAAECRYQSAAGRVQRHPAVADAAWSFGRNLCIVAASRRIPAHKRHQTYSHGDESLHQRVQRHPARAGNQRQPRAAGATGNNQPPRSLRKRKNRRRKSLARRPIFRPNQSTRQWYSPTNCWMRGGRTPKGKCWSPANSSAPRTFRKPCWSTRPPANCLTQAALSRLAILGLMRKPGWKFGYALTLSSIWAACALAPTKLSACGTSSRKACVRSCTGKSSIGTITARPCTAKLRRWTSFSGFSSTKTRTTTGSPSLRRLPSCWNLACWNTAKQCERQTASTLVNGQRLSQKTTPTNTILMCAALKRCAYRHAA
complement(1292337..1292468)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06290; phage(gi169257261)     1.15e-25            SalmonellaentericasubspentericaserovarTyphimuriumCPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
1292522..1292834                   transposase; GJE10_06295                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELQKLMARPCWSYAPEKAGLPAGRGRQIG
1292831..1293651                   IS3 family transposase; GJE10_06300                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumIVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQPCLRWPQRPTNAGRRTYAGSGLVAMAGVPWRWLIAIPVNYWDGISRAVVNRKRPRQRWSKPLLASAAWDELHRRFCYVATMGWCLPAATTQHWRAMGCSRSSSRRTRRNKTAWSSGSERSRSSVPIGRGSRPCSMPVGLATGSSFTTRSVLTGRRKHRRRPMPKPLAG
complement(1293680..1293901)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06305; phage(gi169257261)     1.17e-48            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDC
complement(1293923..1294081)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06310; phage(gi169257260)     1.82e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
complement(1294480..1294884)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; putative repressor protein; helix-turn-helix motif; GJE10_06315; phage(gi169257258)     3.00e-18            SalmonellaentericasubspentericaserovarTyphimuriumMNFGERLQRVLNETGITQSELGRRVGATSQSVNGWCQSGILPRKDILELLPKATGKPLYWFFMEDDEESDVPERLTQGGPTDLNDRQKRLLEIFDQLPTVEQDRFIELAGARLQELDDFMAEYQRRRKIEPPSR
1295014..1295250                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; GJE10_06320; phage(gi169257257)     6.68e-17            SalmonellaentericasubspentericaserovarTyphimuriumMKVTVQRKILSVCSQAELGRRLGRRAQTVNGWFKNKVPGELVVRVARAIDWKVTPHELRPDLYPNPTDGLPSQEASAK
1295216..1295590                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; GJE10_06325; phage(gi169257256)     1.07e-87            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1295675..1296658                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; GJE10_06330; phage(gi169257255)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECPDEGHDPVNVINTSIANGYRGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1296661..1297410                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; GJE10_06335; phage(gi169257254)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1297421..1297768                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06340; phage(gi169257253)     4.28e-79            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTHSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1297765..1298289                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE10_06345; phage(gi169257252)     5.29e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNAIHEIRTAGIKVKES
1298289..1298762                   PHAGE_Pectob_ZF40_NC_019522: putative methylase; GJE10_06350; phage(gi422936660)     2.93e-85            SalmonellaentericasubspentericaserovarTyphimuriumMESQSILDMCCGSRMFWFNKRDERAVFADIRAEEHILCDGRRLVISPDLIADFRALPFADASFPVVVFDPPHLERVGQTAWMGKKYGRLNKKTWRSDLRAGFKEAFRVLRAHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
1298766..1299041                   PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; GJE10_06355; phage(gi423262432)     1.73e-28            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIEQYANDPRMFNVNDEIRQIARIALASLEEEAIGEVSEKRHGLVMDGIVDLGGEYTYRIIKGKAMKRLPLGTKFYIAPPALVV
1299627..1299866                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; GJE10_06360; phage(gi169257250)     1.36e-49            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRTKQLPEGAVPALEKELIARLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFYAY
1299856..1300161                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; GJE10_06365; phage(gi423262436)     1.56e-53            SalmonellaentericasubspentericaserovarTyphimuriumMHIKHRGVADVSRNKVSVTGGYMLEDLPESGYAVIRCYDHCVVARFGSIPDSGRALMYRRGDEISFVPLHPDDIVGTPTLFTQMLEKAGYRITRCFDTLQM
1300201..1300803                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE10_06370; phage(gi169257248)     5.00e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
1301012..1301623                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; GJE10_06375; phage(gi169257246)                 1.02e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1301620..1301760                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE10_06380; phage(gi169257245)     5.71e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
1301757..1302434                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; GJE10_06385; phage(gi169257244)     2.69e-165           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
1302707..1303270                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; GJE10_06390; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarTyphimuriumMTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
1303612..1303688                   tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
1303777..1303965                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06400; phage(gi169257242)     3.75e-40            SalmonellaentericasubspentericaserovarTyphimuriumMKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(1304180..1304865)       PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; GJE10_06405; phage(gi169257241)     1.04e-40            SalmonellaentericasubspentericaserovarTyphimuriumMPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKAGLEPMCLAEYLISGREEWTLISKLMMIPMMNAVRYYHAYLKMHTLKAGHSADIMPTTGIACRTTLVAGSRRKLWYYRNRHGEFRRQKSDCPQLWMIQTMIQYQSVMKVMMAHNHLIQHAHLFMKYTRLTFRTKKITIQEARSSIPISFKRWVTHHHQESPTNLVIGA
1305141..1305470                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; GJE10_06410; phage(gi169257240)     1.13e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1305454..1305903                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; GJE10_06415; phage(gi169257239)     2.62e-99            SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLKAYPDPGTGEIRTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1305921..1306373                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; GJE10_06420; phage(gi169257238)     5.57e-106           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(1306609..1307010)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06425; phage(gi169257237)     7.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
1307297..1307842                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; GJE10_06430; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1307814..1309745                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; GJE10_06435; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1309729..1309932                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; GJE10_06440; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1309929..1311509                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; GJE10_06445; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
1311499..1312995                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; GJE10_06450; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
1313008..1313355                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; GJE10_06455; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
1313410..1314438                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; GJE10_06460; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
1314496..1314855                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; GJE10_06465; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
1314866..1315249                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; GJE10_06470; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarTyphimuriumMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
1315277..1315855                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; GJE10_06475; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(1315904..1317034)       PHAGE_Phage_Gifsy_1_NC_010392: transposase; GJE10_06480; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
1317143..1317544                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; GJE10_06485; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1317552..1318298                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; GJE10_06490; phage(gi169257224)     5.43e-174           SalmonellaentericasubspentericaserovarTyphimuriumMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSIGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
1318349..1318744                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; GJE10_06495; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
1318741..1319079                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; GJE10_06500; phage(gi169257222)     1.77e-77            SalmonellaentericasubspentericaserovarTyphimuriumMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
1319051..1322146                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE10_06505; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLDQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
1322149..1322478                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE10_06510; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarTyphimuriumMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
1322488..1323186                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE10_06515; phage(gi169257219)     2.74e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
1323193..1323930                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE10_06520; phage(gi169257218)     5.25e-148           SalmonellaentericasubspentericaserovarTyphimuriumMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
1323828..1324475                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE10_06525; phage(gi169257217)     6.47e-156           SalmonellaentericasubspentericaserovarTyphimuriumMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
1324537..1327900                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; GJE10_06530; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKKCGYQRAYQRCIWLVYGRNQCHLRVFWRDRSKRVCRYLRLKSHAGREHQGDERRTQHLNTVYRQRHLSDRENHHGDGLARWLRCHHRHDKYRPGENGGGYPVYRRASGHVSDRCLFGLHHFTCRGYQRFSEGSWAVHHVCFRLAAGDGFPVGEQLHKLA
1327939..1328181                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06535; phage(gi169257215)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
1328235..1330605                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; GJE10_06540; phage(gi169257214)     7.13e-82            SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAARQRDGGADISSARRSIRNRREDVRNAGGFQCRCRCVSHCGGSVGKGGSRIGSRSKNIDKRCNVSKYSSGQRNSRLVISIGGIQSRRRIYQRITGGAKQYCCRSSSHQSRRCRKTGRRHRGRDFRRCQPDEKRYRVKQRHGQQRSAGSHAKGGPCCHGRGTDQSAAGQSCIHWNADHTDAARRGTSDCKRVCSTDCCTGRFRTVAGYAAGTGRAGRSFCYHYHHDCGQAAAGRYTDGAVRKKHRSYRIRWFTEHNGCWCVACWWYGCRSEQACITRRASGTDWHDKRQRWRPDNGRGLQQWLSDAIRKYFTSDRNRWGNPHWLERDKWCASARIYSQPSRYRRCVVRMGNALHHTKPTSGFASSRGGDCMAICYSGRLRPDAGAVLRICLPVTGYSVSVRRYPHERLDNKGAHQWTCRIVARNGRQIALAHRAGAGYLRDKIYLIFLRHEIDQYHGQPYSPVRRLYQFILGRLQSHLISAWRWCMDTGRWRPCAYSLYRRTRAHHVYRSTRSRRYCGRRRCGNHGKYCILHSEAGMA
1330602..1331426                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; GJE10_06545; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
1331416..1331994                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; GJE10_06550; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1332091..1332318)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE10_06555; phage(gi169257211)     6.87e-51            SalmonellaentericasubspentericaserovarTyphimuriumMPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
1332425..1332637                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE10_06560; phage(gi100036)            3.13e-08            SalmonellaentericasubspentericaserovarTyphimuriumMISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
1332700..1332765                   DUF4113 domain-containing protein; GJE10_06565                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKREILSLRYTTRYSELLRVK
complement(1333129..1333315)       PROPHAGE_Escher_CFT073: putative transposase; GJE10_06570; phage(gi26246170)         2.33e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPIIAPIPRTERRLMQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLDC
1333345..1333509                   PROPHAGE_Xantho_33913: ISxcd1 transposase; GJE10_06575; phage(gi21231544)            4.98e-07            SalmonellaentericasubspentericaserovarTyphimuriumMAIDQITQSGLSSIKVIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
complement(1333544..1333903)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; GJE10_06580; phage(gi169257210)     2.50e-82            SalmonellaentericasubspentericaserovarTyphimuriumMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSN
complement(1334222..1334359)       hypothetical protein; GJE10_06585                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(1334839..1336332)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; GJE10_06590; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
1336736..1336748                   attR                                                                                 N/A                 TATGAAGAACATA

#### region 4 ####
complement(1722076..1722279)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; GJE10_08335; phage(gi428782403)     2.21e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK
1722582..1723373                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE10_08340; phage(gi169257320)     3.48e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
1723670..1723873                   phage tail protein; GJE10_08345                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
1723995..1724308                   transposase; GJE10_08350                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELRKLMARPCWSYAPEKSWPPCWARTTDAG
1724305..1725125                   IS3 family transposase; GJE10_08355                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumIVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPGSRPCLRWPQRPTNAGRRTYAGSGLVAMAGVPWRWLIAIPVNYWDGISRAVVNRKRPRQRWSKPLLASAAWDELHRRFCYVATMGWCLPAATTQHWRAMGCSRSSSRRTRRNKTAWSSGSERSRSSVPIGRGSRPCSMPVGLATGSSFTTRSVLTGRRKHRRRPMPKPLAG
1725257..1727623                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE10_08360; phage(gi169257322)     2.16e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
1727708..1727944                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; GJE10_08365; phage(gi23505490)     8.21e-52            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
1727952..1728941                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_08370; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
1728956..1729324                   PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; GJE10_08375; phage(gi148609434)     4.66e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(1729353..1730684)       AAA family ATPase; GJE10_08380                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
1730981..1731310                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); GJE10_08385; phage(gi23505495)     2.54e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
1731324..1731767                   PHAGE_Entero_SfV_NC_003444: capsid protease; GJE10_08390; phage(gi19548994)          1.43e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
1731773..1731916                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; GJE10_08395; phage(gi23505467)     3.76e-28            SalmonellaentericasubspentericaserovarTyphimuriumWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
1731903..1733143                   PHAGE_Salmon_ST64B_NC_004313: tail protein; GJE10_08400; phage(gi23505468)           3.08e-10            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPPRAAAQRISTVICGMQSRKRSVLLLKPPAYHSVKANIRSFTPPLAGSMNRLKPVLKKIRMARTSRISRCFSRTLVTFFLKVTGDSSRERLSVTQLTEHQSARVRLQAVSLCVRIRPPTRQTRVSGKLLPLARWVRPLLWMFLQSVAITYCLVTEQERVLPHGVKWRCWRGAPLRGVFLHQICVAIPWLRLGMALVGWLKVTLMVQVLMVTITLSHGMVSDFRTQKTWLSGHISAPDSVLSQLLKTCRLEVRYSTKMAMYTVIYGAVVADRAGARLWLLSQRVSTSPWLVCTRTTKQSHLCFMMMGLVYSLLQLTCVGMFSQFDSVPLSMETYIVRPDLQTSVTSLQVLRMETRTIHQTGSNDACYSLKMASGIRWEHAA
1733146..1733673                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE10_08405; phage(gi100034)     6.18e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
1734051..1734494                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; GJE10_08410; phage(gi971758532)     2.41e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(1734548..1736377)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; GJE10_08415; phage(gi255252697)     3.17e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(1736725..1737015)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; GJE10_08420; phage(gi46402108)                  3.33e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
1737043..1737546                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; GJE10_08425; phage(gi100082)      1.50e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM

#### region 5 ####
1928845..1928856                   attL                                                                                 N/A                 CGCTTCCTGCGG
1929245..1930426                   PHAGE_Salmon_SEN34_NC_028699: integrase; GJE10_09320; phage(gi966201449)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPALTLRDARNIVADLRESVDKGIDPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKALYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPRRARQLLVQLRAAIGWCTRRQFISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGARNSELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPDLKKSMTIAGANRFLGRIESSLGIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGVLSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG
complement(1930789..1931028)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_09325; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1931071..1931606)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE10_09330; phage(gi169257271)     4.15e-73            SalmonellaentericasubspentericaserovarTyphimuriumIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPVPAQRMSVQEITSEVSTTTSAQESATNVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYGSMHRTKSRQSTQFQTLANRKPQRCLLKLKARLALLNVILATNCTISTASPWMINRNTSAAA
complement(1931614..1932180)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE10_09335; phage(gi169257271)     3.96e-119           SalmonellaentericasubspentericaserovarTyphimuriumMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTGTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITQGRTSLPLRRCYPQFSAMGFKP
complement(1932191..1935122)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; GJE10_09340; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKTGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKKRNSASRNGHRFICPEPAACRRECSVQESHTHSQNSECRKSIPCRWKNSTGNCYPVPNMVRDGAYLSRFARGVGERQPCIGYSAHKRRQRWRWQDPPLRTHSRYSGRRDCNGHFAYGLYLATGSVYRRAKEIVKKKGKSVQRMVRSTSRNARYLDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTETSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPEITSNVQVQEADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAALAGILRAGPLRCTKRGLPRRQRDQLNSGERCSRVADVLRASRREDYRQRALPSTHGQPGTCSGSTAGKPRSGVQRRADPGCFHHHRHPARVHRRAQRQPASTAECRYQSAAGGVQRHPVRSSTAGCQSGRNRAKLHSATCIPAHSRPETDSRSHEGLYQRIQRHPAYAGNERPRTSGATGNNQPPGRSGSAKIVAVESIWHEGRSDSGREISQPGSGIRRRIAGCVAGEHRRESAGHPPTAQHRAEHSKSPAGAPDRRQIADSPKPRCRGLFWDGNRVGSSGTPPDRYGRPAHWRRPENYQHVEHQAGRPACEVAPGNHRPGLSPERGHVLRNCGAGPVFLDFRQQRRELPLGRHHGVYRVAGTWHAGIPQNNASDSKRLRHWMASAYHRRLHRRTERFYAPPSVARTGIA
complement(1935249..1935599)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_09345; phage(gi169257273)     2.77e-45            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1935621..1935778)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_09350; phage(gi169257274)     2.01e-07            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKTSFSIATARNWRAKKRNIVPGSVLNTTRWRTKVAA
1936177..1936383                   PHAGE_Entero_HK225_NC_019717: hypothetical protein; GJE10_09355; phage(gi428782417)     2.46e-24            SalmonellaentericasubspentericaserovarTyphimuriumMERDELEEDRAAFIAGEIGGAVVELIIDGVVINRDAIVERLEEKRRRVGNVIHKGVLRDAAAMVRKGQ
complement(1936410..1936844)       hypothetical protein; GJE10_09360                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRSAFVMREAKVANEEYGVHNPNHGYGGGDGGGGSMTERLERLEKKVDSIESTLSRLNETLTRIDNKFERVDDRFNAIDKRFDEVDKRFDAVNKSLSEKINTSVKLTEANTKTTVAEAKLAIILAIPAIIGAVYTAYKLLTKQ
complement(1936846..1937271)       hypothetical protein; GJE10_09365                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMERISFLYVSQIFPGKIARSLNYPQPWIKPDEQSGKISIDVSFGLIIRTKVNYRVDVDLFYGDQRVEFGSNQSLQTDPIVAGTTSGNESVSIENMSIMNIHAENEGVYRVTLSLHVVDDNESSRMIHNSECFFYLSKEWKL
complement(1937314..1937781)       PHAGE_Entero_mEp237_NC_019704: prophage repressor; GJE10_09370; phage(gi435439304)     1.76e-97            SalmonellaentericasubspentericaserovarTyphimuriumMTKVKHHFTNKSNSTCLPTSKAIIYNEAMSDNTLTNGLISRLAELNKKGFSKTEMARVAGVSKQAVSSWFKTGRISKSSALAIADAAGVSVPWLLGEDVGEKDGLKPDEQRLLELYRQLPEEEQQNMLRIVSLRLKELDELYAKYMGRRIKGDAE
1937795..1938022                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; GJE10_09375; phage(gi169257277)     1.43e-12            SalmonellaentericasubspentericaserovarTyphimuriumMTGIEKAIQKFGTGAALGRALGFSKMTISNWKKTGIPPDHIRSVFELTGVTPHELRPDLYPNPTDALPSQEASAK
1937988..1938362                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; GJE10_09380; phage(gi169257278)     5.85e-72            SalmonellaentericasubspentericaserovarTyphimuriumMHYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGVQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1938454..1939290                   PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; GJE10_09385; phage(gi428781918)     6.56e-70            SalmonellaentericasubspentericaserovarTyphimuriumMANTAEVINFPVPDVAHKEPRVADLDDGFTRIANEILEAVMHAGLSQHQLLVFMAVMRKTYGFNKKSDWVSNEQISELTGILPHKCSAAKSVLVKRGILTQTGRVIGINKTVSEWSSLPEKGTEKKTYLKKVNLPESGKKSLPESGNGYYPNQVNTKDTITKDSKDNSNNPPKSPRAVSFDASSVQLPDWLSSITWSSWVEYRRDLKKPIKSQQTVTQAINLLDRCRLNGYTPEEIINRSIANGWQGLFEPDGQAKRSRDIDQESIHWNSPDAWRDFL
1939287..1939982                   PHAGE_Escher_HK639_NC_016158: replication protein 14; GJE10_09390; phage(gi356870655)     2.78e-71            SalmonellaentericasubspentericaserovarTyphimuriumMKPELYRAINNRDGAAMASIAGGNPEHGRVVNSDAERLVDALFMQLKQIFPAATQTNLRSDADERVAKQQWIAAFSENGIRTRKQLSAGMQKARSSQSPFWPSPGQFISWCREGSGVLGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELHRAAGDILHEWEKRVLAGKPIPPVRRALAAPSRDRGPTPAEMLMAKYKQRKDAGLI
1939996..1940253                   PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; GJE10_09395; phage(gi374531241)     1.71e-52            SalmonellaentericasubspentericaserovarTyphimuriumMSILTILDVGLALMGWLFIMFRAGQWFISVALKQWDRRRKQSRRQKAVNEFYDAFDLSSIEPGTTVRLATKGDLTIMMFRQEAAQ
1940250..1940864                   PHAGE_Escher_RCS47_NC_042128: baseplate subunit; GJE10_09400; phage(gi100105)        9.92e-81            SalmonellaentericasubspentericaserovarTyphimuriumMKERGMIFNAEMVNAILSGRKTQTRRPIKWKQTRFTEIAERDDGSLWPWAEDCERGGDIWFTCPFGEVGDRIWVRETFRVHSRATDVATLVYRASVRNSWTEQTHRVPVAVCNKPATPEKWTPSIHMPRWSSRITLEITDVRVERLNSITESDAEAEGVTDTGFGVLLVDGFRYLWKSIYGDDSWQANPWVWVIEFKRVEGGAA
1940861..1941334                   PHAGE_Salmon_BTP1_NC_042346: DCTP pyrophosphatase; GJE10_09405; phage(gi100024)      4.36e-48            SalmonellaentericasubspentericaserovarTyphimuriumMNIDKQALREVAEKATKGPWMLFSDIDTKTFSIHTPRDKRCENVIKWGGFDCQPNAEANAEFIAAFNPKVALALLDELDSANGYASAYEAEKWHYHGLSESEGERAERAEKQVEELTMWVKRLAHSLRNAKPNSKLYGAAMDYLSHKGLISVEDVLR
1941796..1942242                   PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GJE10_09410; phage(gi24371543)     5.19e-69            SalmonellaentericasubspentericaserovarTyphimuriumERERIRRKHAEWSDKTFGDVGPVGPLKHLSKEALEAAADPSDPLEWADMQFLLWDAQRRMGISDEFITRAMIEKLEINKSRQWPEPKDGEPRLHIKEQPAPVVPPAIEPDYEVIKSILPTANPDEYACTIAADMWSACRAAMLNGGKS
1942239..1942796                   PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GJE10_09415; phage(gi24371542)     1.84e-124           SalmonellaentericasubspentericaserovarTyphimuriumMKENQIRELVNELRDIAIEYHGTQQLRERIARTVRAALHHDLEKLNQPVSQTYNLPELIEGMEVSIDVSTCDADAGNRYFGTVNEVSELDSAKNGYILLVQDAKPNFDVNGNSPVSPGGWINCSERMPDNDESKPIAIFTGKCLGQGMFVATYDDDGFFDYWEGMEVIGVSHWMPLPAAPEPDQS
1942895..1943161                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; GJE10_09420; phage(gi423262434)     2.67e-59            SalmonellaentericasubspentericaserovarTyphimuriumMRIITRKKPAFTDLYQTGVLTRIAAVKTDSGGWRLFGVWRDQDIAVFVEAARGGIREWSGLNYLAEFVFSCGISLWEVHNKTDRKTPA
1943317..1943550                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; GJE10_09425; phage(gi169257284)     1.99e-50            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1943667..1943915                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; GJE10_09430; phage(gi435439314)     2.86e-52            SalmonellaentericasubspentericaserovarTyphimuriumMSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
1943950..1944552                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_09435; phage(gi169257286)     1.46e-146           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1944761..1945372                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; GJE10_09440; phage(gi169257288)                 7.22e-145           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEKTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1945369..1945515                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_09445; phage(gi169257289)     1.27e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
1945505..1946302                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; GJE10_09450; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLESLPKYFSPKSMMLGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAKRHGALRKMEEDKRSKFLDTMARYVFRDYSLSAASLVTCNSCHGAKLIDAEIFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCGGRGYPRLKDTEVFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
1946562..1946909                   PHAGE_Entero_SfV_NC_003444: holin; GJE10_09455; phage(gi19549036)                    1.13e-48            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSWQGWLELFQSWWRGDTPLGAVLMSLFMAGLRIAYFGGSGGWKKKTLEILLCGALTLTFSSALEYFGWPKSLSVAIGGGVGLIGVDAIRGFAMKFISGRIGGDNNKV
1946912..1947523                   PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); GJE10_09460; phage(gi23505496)     5.84e-93            SalmonellaentericasubspentericaserovarTyphimuriumMNESQFQQAAGISAELAARWYPHITAAMSEFGITAPLDQAMFLAQIGHESGGFTRIVENLNYSADGLKATFGKYFPSDTAQLYGRTADHPANQKAIANIVYAHRMGNIEENDGWNYRGRGLIQITGHDNYRDCGAGLGADLILSPQLLEQDEYAARSAAWFFASKGSLKRSGDIKAVTKIINGGTNGLDDRKARYEKAKSVLV
1947520..1948071                   PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; GJE10_09465; phage(gi966201566)     4.89e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSTLFAVIKKLWKPLAEILLVAFLLCAAAYWCYSRGYQEADSSWKLQWAQRDLTDATTALQREVTERAKEQRRQHAADEERKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAQLLGEADDLAGKFAKEADERYVAGSTCERTYDKVMGKENEN
1948061..1948462                   hypothetical protein; GJE10_09470                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKIKLVKYWKIELFEQSKDKSVISNMMNEPKRPFFTGYSKEPIKPHKLQGGDFISLATSPDFIETKSVRTYRVDEFKCTPVYENDDAFQEAAKPLIKWLAENVHPHHQAIVTSTHAELLESQYVVKTEEFLKD
1948523..1949497                   PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; GJE10_09475; phage(gi431809885)     3.76e-47            SalmonellaentericasubspentericaserovarTyphimuriumMAKPDWGALQHQFLAEHAKSGISPKDWCEAQGLNYATARRYIKKPTAQSAQKNAQKKMRTAQAKKSAEKLLNSELTPQQKRFVAEYLIDQNATAAAERAGYSDASYGRQLLTVPHVAQAIAQQQRDSLVRTLASADEVLEKMWQLATFDANEISQYRRGCCRYCWGFGYHYQWRDVVEFTEQKEKVAGKEGAKEPDDAGGYGYNHNREPNPDCPRCNGDGVGRPHFADTTKLSPIARLAYSGTKLVKGGIEISTISREKMFEAIMRRLGLAESELAQRLLDLEIRKRTAEAERLEQEVELKRKGKGKDDEPTVVIKLVNSPDGD
1949487..1950758                   PHAGE_Salmon_SSU5_NC_018843: putative terminase large subunit; GJE10_09480; phage(gi410491412)     3.84e-15            SalmonellaentericasubspentericaserovarTyphimuriumMATEHVIEFLPFHAGQKKIYRSPAKRKVIRAGRRFGKTTMLEQAGGNWAARQMCVGWFAPSYKILLPSFKTIRDLLKPITISSSKTDSIIELIGGGLVEFWTLDNPDAGRSRKYHKVIIDEGSLVKKGMRDIWEQAIEPTLLDFDGDAVMAGTPKGVDDENFFYQACNDKSMGWEEHHAPTAANPTINPAALARIIDGRPPLVVQQEYNAEFVDWRGQNFFKLDWLLENGAPVDYPFSCDTVYGVVDCAQKGKLQNDGSACIWFALDNLPSPHLIILDWDIIQIDGYFLKDVVPQWEGKAKHLSEICRARMGTTGLFIEDKATGITLLQQGANEGWNVHPVDSELTSLPKESRAINISGYVASGKVRISKYAFDKIVEYKQSKKNHLLTQVLQFIIGEENQDDDLFDCFNYGVALGLGNGEGF
1950758..1952188                   DUF1073 domain-containing protein; GJE10_09485                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQDDDDICMGSNAGVLSKILEGGSIEPGAQAGYELCKLIYLFHPLGGKMVDRPIKLAMSEPRTVHVTRGPERRLREAFEREWKAIKADRIIANTARQSRIYGVGAVVMLVDGEPTNEAAEFESLYKKSITFNVLDPMNTAGSIVMNQDPNSADFQKVGNVTVASKPYHHSRCCVMMNEDPIYLAYTPSSFGFAGRSVYQRALYPLKSFIQSMRADDMVTIKAGLLVAFIKQASSIVNNMMQKMSGIKRWMLKRGGNGDVLQVGEHDKIESLDMQNLEKPLDTARNHILANIATAADMPAILLNSETFTRGFGEGTEDAKAVAQYIDDVRKDLQPLYDFFVRIVQYRAWSPEFFEALKNDLPEYKSISWEAAFSSWVNNFDYVWPSSLKEPESEKVKVDETRFKAITEMLTVLLPQLTKDPQNRATLIKWACENANMNENLFADRLELDYEQLEQNPPDVTPPGEGNFDELLSERAA
1952160..1953035                   hypothetical protein; GJE10_09490                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNSFLKELRDAIKFFLEHGYSSEESLIMWTERLRNATEDKIGGDDFYRYVSRRLTAAYDLEVGRERALKRHPGVSRFTLNYLEPKLRAELDRRIMASADLIKLNRTQAVDRTIQRFSGWATSIPPITSISPGLSASSRSGVVATSQHIAKSARQIDFERRRVMVDQTHKLIANIDNIIATDGGAIAAVWHSHWRQPHYDYREPHKDRDLKTYAIRGNWALKKGFMKAGPAGYLDEITQPGEEVFCRCYLTYIYNVRSLPDEMKTEKWRKFTEGNMSVGRRTANFEGFRNGG
1953036..1954610                   PHAGE_Burkho_Bcep1_NC_005263: gp18; GJE10_09495; phage(gi38638625)                   1.05e-22            SalmonellaentericasubspentericaserovarTyphimuriumMNTYAAGILFKSGGKIFLVKRGDDGSWAVPGGKLEEGETPEAAAKREVLEECGFDYSAPLTPHTLIDGYVTYLADDAEQFDAVLNDENQACGWFSPDELPEPLHPGMVAMLDAEPLNEKDVAGLIADGQLTSPQFFRNMYLWALRITGTGVTWRSKFRQYAYRSPENYLTDDFLARCSGLPVIWLHPEKNTLNSEEYAARTIGAIAFAWIQGDEVWGMARIYDTDAATILSTRQMSTSPTVTGGDDVLINVDGEPLLLEGTPVLLDHLAICEQGVWDKLGEPTGVKSDTLLNEVQKMDEEKVLALINQALDAREARAKADAEEKAKADAEAAEKAKADEDAARLKEEEEKAKADAETKAKADAEAEEKAKADAELEKIRADMEEMKSRVPQELSDEERNEIADTQCKADSVFASFGERAPQPMAGERAMPYRRRIMTRLQKYSSDYKEVDLHAIADSQLLSIAEKKIYADAQASAASSLEPGAGLREVTRTDATGRRISTFIGDPSATWAPFQAVSRKVAGIKQ
1957727..1957738                   attR                                                                                 N/A                 CGCTTCCTGCGG

#### region 6 ####
2025795..2025807                   attL                                                                                 N/A                 TATGCAGGAAAAT
complement(2033626..2034093)       PROPHAGE_Salmon_LT2: integrase; GJE10_09945; phage(gi16766072)                       5.15e-46            SalmonellaentericasubspentericaserovarTyphimuriumMGKLGGEMKALAKHYGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQ
complement(2034568..2035041)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; GJE10_09950; phage(gi100007)     1.32e-52            SalmonellaentericasubspentericaserovarTyphimuriumMALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
complement(2035205..2035280)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2035205..2035282                   attL                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(2035689..2035979)       PROPHAGE_Escher_Sakai: putative integrase; GJE10_09960; phage(gi15834507)            3.32e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(2036175..2036250)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2036175..2036252                   attR                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(2036351..2037148)       DgsA anti-repressor MtfA; GJE10_09970                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2037237..2037326                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
2037315..2037327                   attL                                                                                 N/A                 CTCTCTCCGCCAC
complement(2037440..2038429)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; GJE10_09980; phage(gi100105)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2038431..2038673)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub assembly protein; GJE10_09985; phage(gi100106)     4.38e-51            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
complement(2038698..2039267)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; GJE10_09990; phage(gi100107)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
complement(2039271..2039852)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; GJE10_09995; phage(gi100108)     2.03e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTTITKERIELFIKSPLENGLTRGEQMELARIALASLEAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVSWTTIKAIWNKGVEHFRSSTATGDN
complement(2039863..2040120)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10000; phage(gi100109)     8.08e-58            SalmonellaentericasubspentericaserovarTyphimuriumMATLTKQEKAWVKKLNKLLAECPSNRIAFATTGDCEVSLFDVTRYDEIFDEVEKGKSEFIPSAMRIGATFNECLTFPNQVESTAG
complement(2040122..2040655)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10005; phage(gi100110)     1.88e-131           SalmonellaentericasubspentericaserovarTyphimuriumMTVHTLKQCRPDQEETEYLWKLFHAAQRNDARWHGSEISIIADELSRTDLDRNQKLFLLRSWQVLVDDKGGFGRFMGAFDTYVYNMQDPDDDCVAWKPELSNLLCDGQLLDVVIDAYQSARQRIAELEARTVNLSKRSVGEVMHMSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKGE
complement(2040726..2041265)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10010; phage(gi100111)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
complement(2041402..2042229)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10015; phage(gi100112)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGTMTTTSIEDFVRYSKGYASATEKARCFIDADHMTARSVFNIGTLDNPGHADNAASITLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGNTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDMLINKFDGESVETFIGNFKA
complement(2042287..2042658)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10020; phage(gi100113)     4.84e-85            SalmonellaentericasubspentericaserovarTyphimuriumMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLLSIKGTTDGKLKAAQ
2043198..2043422                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10025; phage(gi100114)     1.54e-46            SalmonellaentericasubspentericaserovarTyphimuriumMPILETTLNSDSSNEGLAADVRALKIAVALLVTRIPLEHKPYAVCDALNNSGESSASELADLIKQFLDKAHNRT
complement(2043385..2043723)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10030; phage(gi100115)     7.56e-78            SalmonellaentericasubspentericaserovarTyphimuriumMNNYYTCSFCGANEMDAKKIIAKGGNADPAICSECVVRCVGVLANTSTTESTRSTEMNNAASIEFWQLITALSEMAISSLKAAQEMGDEESACLIAKKLSVKFDYAPCRETV
complement(2043929..2044624)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10035; phage(gi100116)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2044722..2044946                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10040; phage(gi100117)     5.22e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
2044975..2045529                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10045; phage(gi100118)     4.84e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
2045526..2046668                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10050; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDNSCRNLTAGFVMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGIGVLELLSATNDAPASFLLSQLGYIQIMVGWVGAPKGAPVSDNAGYANPAQFTTSEIGVSGGGVTSKLSEAAIMATVPTLAQPEISVINGQAVTSSLAVADYFTKRHDDVLKKIRALDCSPEFTARNFAVSDYTDASGRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSKPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKVESPLAVSLYDRINDAAALASLINMTLNRSEVRGRK
2046665..2046889                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10055; phage(gi100121)     1.47e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
2046886..2047860                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10060; phage(gi100059)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSSLIQLLDRPIAYNPAFAKLKAGKVKAGPVAAVFLSQLVYWHNRMDGGWMYKTQADIASETALTRDEQETARKRLVALGVLEEARRGVPATMHYRINTERLEALLLETAKPVKKGAQEKTRLRDLQNVETPQSGLVQPRKPDCGNAANKNVETPQTSTGQPNEQACGDPTIFPTGDYTETTQEITQESKTPSCPVAAQPDPEVMITDQAIEVLTHLNQVSGSRYQKSKTSLENIRARLREGYSVADLQLVIDLKHEHWHENDEQYQYMRPETLFGPKKFESYLQSATRWDQKGRPKRADWGAKKRDVMAFGPVDTTIPEGFRG
2047857..2048330                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10065; phage(gi100059)     9.01e-73            SalmonellaentericasubspentericaserovarTyphimuriumMSLLAKVQAFIELNPGLTSNEIADAFPEYARFDVQRSASKLYRCKRVNRRLDGDVFRYYAGKDEAVILTLRQKRSGRTGSGDPMVLAKLVSLAEDLESRGLFKRASAVWLEAFSESQLTGEREAFLRQRQRCLDSCKKPVRPGEQIYLAGRFVGNVE
2048327..2049202                   PHAGE_Salmon_118970_sal3_NC_031940: thymidylate synthetase; GJE10_10070; phage(gi100061)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTSESVCIESSDVTISVDESASRSWRRPFLKWAGGKYSMLPDLYQIIPAGMRLIEPFVGGGSVFLNSDKHACFLLADVNTDLINLYQMLAVVPDTVIRHARVMFDRLNDAESYMVLREEFNAQVMDGPERAAAFLFLNRHCFNGLIRYNRNNQFNVGWGKYPSPYFPEEEIRAFTRMAHNCVFMAAGFRRTLAGEGDVVYCDPPYEPMPGTAGFTHYAAGGFTWDDHIALAECCVAAHQRGARVVIGNSTAPRVIDLYSQHGFEIRYISARRSISSKGSTRETAKDLVAIL
2049211..2049600                   PHAGE_Salmon_118970_sal3_NC_031940: ribonucleotide reductase A subunit; GJE10_10075; phage(gi100062)     3.18e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKLTLPFPPSVNTYWRAPNKGPLKGRHMVSASGRKYQSEACAAVIEQLRRLPKPSTAPAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAA
2049617..2050477                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10080; phage(gi100126)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGDQKYRPKYWLDNKQTRELIEQLFTEGGIPSSEQNQSVSFFQGGSDTRSLVRAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
2050485..2051472                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10085; phage(gi100064)     1.19e-53            SalmonellaentericasubspentericaserovarTyphimuriumVRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGVVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGMAVSGRIQTGTANRQPCATLRGNPTVLALRPAARTVYGTAGINSCGEYDKMGFIGCLSSGFRYARSHAPGTVLVDGTQPGRRFAGERSEKSIKDAEGNCPVSYPKNCSLGAGHQPCTGGEKGTGAQGSGIAGKLHVTSETPSMGQEIYPLGIPAVRVLREAGGSASPDRPRSGRDGNKGAPLCAAVVQNASQVTCGHRGIRREIRLSTGVDISFYRSCAGNRRSGVA
2051486..2052238                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10090; phage(gi100128)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLEALPKYYSPKSPKLSDDAPATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKVGVQDPQFAIEGLLNHAMALDNPTLNKLSEETRLQIIPYLVNFAFADYSRSAASKARCEHCAGTGFHNVLREVVKHSRSGVSVIKEEWGKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHGTPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQWYKGYADIIDKLVTKCWQEEAYAEAQLRKVTR
2052389..2052646                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10095; phage(gi100129)     1.08e-56            SalmonellaentericasubspentericaserovarTyphimuriumMQGEKQQPYFFNPGMTVEQLEDWLEQQKLHLSRYNRLVKEKAELEERLSDISVEIERMSAGGFNGKLSFPRESSPPLRNNQQGSV
2052792..2053178                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10100; phage(gi100130)     6.27e-82            SalmonellaentericasubspentericaserovarTyphimuriumMSDPISGTGLAGGALTGASVYGLLTGTDYGVVFGAFAGAVFYIATAADLSASRRLAYFIVSYIAGILCSGLVGSKLANLTGYSDKPLDAIGAVIVSALAVKILTFLNNQDIGSLVALITRRGGSGGAK
2053165..2053446                   PHAGE_Entero_mEp390_NC_019721: putative holin; GJE10_10105; phage(gi428782713)       2.26e-26            SalmonellaentericasubspentericaserovarTyphimuriumMELNDPTATINALLCACVVITLMFYRRGDSRHRPWVSRLAWLITVTYSAVPLAYLCGIYPHSSWPIIVANTIFLSVLVAVRGNVARLVDHLRH
2053446..2054060                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10110; phage(gi100131)     1.54e-150           SalmonellaentericasubspentericaserovarTyphimuriumMNQQLFQKAAGISAGQAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
2054057..2054449                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10115; phage(gi100132)     1.01e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKMSYWALILTFIACVAGGLVWSANHYHGKFLEEQKRADAAEQRADSTEAITENVLRTMAITNIIQEANQHAKQQIALESQRTQEDIKVAVADDDCASRPVPDVAADRLRKYADSIRAGSNDAVTGEPAR
2054912..2055205                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10120; phage(gi100133)     2.63e-52            SalmonellaentericasubspentericaserovarTyphimuriumMPVNIDPEQLNDEREQVIAKWLFKDVDLISQQIELGEENVKRFDELLSIFDCCQSSWFATEHLFDNTELEKVWHEFESNCNDPLKSCSGHNEWRSQT
2055202..2055517                   transposase; GJE10_10125                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELRGSLWRGHAGVTRQKKAGLPAGRGRQIG
2055514..2056335                   PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; GJE10_10130; phage(gi100011)       2.28e-15            SalmonellaentericasubspentericaserovarTyphimuriumMVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWIQFYNQKRPHRALKMKTPAQAYAEAA
2056351..2056362                   attL                                                                                 N/A                 TGGGTCATTACA
2056513..2056863                   PHAGE_Entero_SfI_NC_027339: HNH endonuclease; GJE10_10135; phage(gi849250284)        1.27e-76            SalmonellaentericasubspentericaserovarTyphimuriumMPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
2056989..2057483                   PHAGE_Salmon_118970_sal3_NC_031940: co-chaperonin for GroEL; GJE10_10140; phage(gi100075)     6.48e-106           SalmonellaentericasubspentericaserovarTyphimuriumMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
2057480..2059213                   PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; GJE10_10145; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMPITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVAMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYANMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
2059225..2059407                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10150; phage(gi100077)     1.17e-33            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
2059407..2060648                   PHAGE_Shigel_SfIV_NC_022749: portal protein; GJE10_10155; phage(gi557307529)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVYYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
2060626..2061276                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10160; phage(gi100080)     1.30e-151           SalmonellaentericasubspentericaserovarTyphimuriumMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVVSGAFAASLRAWSDRKALPALLWQHRMDEPVGVYTEMKEDDVGLFVRGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEVFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGKIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNALKNLNF
2061291..2062496                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10165; phage(gi100081)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQDLQQKFDDFKAKNDKRVDAIEQEKGKLAGQVETLNGKLSELESLKSDLEKELLELKRPAGGAQNKVATEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRPQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTDESDKARAFGKLQHIVSGEATTVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFTIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
2062546..2062746                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10170; phage(gi100082)     4.15e-31            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGMRVEVIRAGEYDDGALPARVQEIALQAGLADRGTSAKSSKATKEKKATTSKEG
2062749..2063072                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10175; phage(gi100083)     2.64e-68            SalmonellaentericasubspentericaserovarTyphimuriumMLLTMEEIKAQLRLDEDFDTDDRHLQLLACAAQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
2063069..2063473                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10180; phage(gi100084)     1.84e-69            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYILPDPGELDKRIAIRLRVDEPNDDFGVSPSYTEEICTWAKMAQPGAAAYQGSVQTEKIVTHYFTIRWRRNITADHEVFCDGQVYRIRRIRDLNSKRRFLLLECEELGTERAEGYAEQSVFTR
2063445..2063957                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10185; phage(gi100085)     6.73e-106           SalmonellaentericasubspentericaserovarTyphimuriumMQNKAFLHVDFEQPETLVFNRARLRRAFVCIGQVHMRDARRLVMKRGRSGPGDNPSYRTGKLARSIGYYVPRASSRRPGLMVKIAPNQKNGEGNRPISGAFYPVFLFYGVRRGAKRKKGHHRGASGGSGWKIAPRNNYMTEVLERRRSWTRYILSRELRKSLRPQRRKKK
2063954..2064511                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10190; phage(gi100086)     4.57e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRARCPLFENRVGGAAQFKAIPEAGKLRLPAAYVVPSEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQLIWKALLGWEPDPQAHEIQYAGGMLLDLNRHELYYQFDFTAKYEITEEDSRQQEDLDVLPDLKTLSIDVDFIEPGTGPDGNIEHHTGITLP
2064533..2064697                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10195; phage(gi100087)     1.14e-29            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPVKGRSVPDPAHGDLLPEEGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
2064687..2066183                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10200; phage(gi100088)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDVVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNTMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
2066183..2066539                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10205; phage(gi100089)     1.20e-82            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKSFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
2066536..2066862                   PHAGE_Salmon_118970_sal3_NC_031940: DNA ligase; GJE10_10210; phage(gi100090)         1.48e-73            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
2066947..2068872                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10215; phage(gi100091)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFKLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGKSATKSQKRAMAFLKLNPAQLAADMQKDSRAAMLKVLDSLAKVPKAKQASVMNALFGKESLGAIAPLLTNLDLLRTNFNRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEIDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAAPPSTQRSELKVTFENAPQGMRVLDIPKTGNPLMNITHDVGYSPFSNK
2068889..2069338                   hypothetical protein; GJE10_10220                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKILVAACVMVLSFPVFAKKTPTTDFVNEIEAAINSTGEVSTSLDITCPAQSASGRVLVTHADYTYGMSKGVFVFKNTDDTPAEMKSIIPIHPNNDIMSDIISGWDFGFIIRGGQFFVKVMKNGEVKAGINKNGTSGVTEVKCKVTKP
2069398..2070738                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10225; phage(gi100092)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVVGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPSAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIVTVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
2070735..2071793                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10230; phage(gi100093)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDAVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGKNLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKTKKKVSEEADF
2071793..2072326                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10235; phage(gi100094)     5.75e-128           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
2072331..2072744                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10240; phage(gi100095)     4.62e-95            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRNDATASLDLLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSELNG
2072737..2073816                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10245; phage(gi100096)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHASIKRCPRKNAVSAKGFARWDGIAGRPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGADTEELETWRARVMERYYWIPQGGADPDYVIWAKEVAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
2073819..2074406                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10250; phage(gi100097)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
2074393..2075955                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10255; phage(gi100098)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGSLGIGTDNALGGNSIVLGDNDTGFKQDGDGVLGIYANNARVGYIDNSGLHMSVDVLTNGGIRAGDGKRLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGIAYAPLQKRVGNQWYTVQGGTA
2075925..2076365                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10260; phage(gi100099)     5.89e-93            SalmonellaentericasubspentericaserovarTyphimuriumVVYRTRGNGIMKKYQDIKNFRLIDAPVNRGKTQSEINIGAFFLESEDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYAVSMLWPVNMSVAEIAAADCPDDCRGDGMWLYQDGKVAQRVHSPEELRKNVMTQPFLHN
complement(2076406..2076891)       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; GJE10_10265; phage(gi41057343)     4.81e-13            SalmonellaentericasubspentericaserovarTyphimuriumMQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWISFTTRSVLTRR
complement(2077194..2077509)       transposase; GJE10_10270                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELRGSLWRGHAGVTRQKKAGLPAGRGRQIG
2077551..2077562                   attR                                                                                 N/A                 TGGGTCATTACA
2077558..2077695                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10275; phage(gi100099)     1.99e-23            SalmonellaentericasubspentericaserovarTyphimuriumLQRAVKLKIATDEEIKRLDAWELYSVMVNRVDTASPDWPDVPVSQ
complement(2077809..2078042)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; GJE10_10280; phage(gi100100)     1.16e-49            SalmonellaentericasubspentericaserovarTyphimuriumMKSKDTLKWFPSQLPKVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKAKAWLDNKELLQTAVSVLKENQDANGKI
complement(2078117..2078230)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; GJE10_10285; phage(gi100101)     5.29e-18            SalmonellaentericasubspentericaserovarTyphimuriumMDNTLIIISLLIIFSIFSYAVIKVGIGISNNPDKTDE
complement(2078278..2078691)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate distal hub subunit; GJE10_10290; phage(gi100102)     2.23e-97            SalmonellaentericasubspentericaserovarTyphimuriumMKSSITLSSLLVLTVIITGCSSGKSKDDYSQVDGIYFWGQDISAFQPCHTRQIYWLNGEKTTLRSLKKHHSTNKNVYASLIVHNDGYQDKGSSGTYDETLMLEKIISTDNSKNHADCLNFIIPSKKHKVTSKNELSR
complement(2078688..2078900)       PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; GJE10_10295; phage(gi100103)     7.46e-42            SalmonellaentericasubspentericaserovarTyphimuriumMNTLDISSYPPNLLSDIEIIYGKALLQLILESKKINSENLISQLKHEQKEQQWLEDKEPLSTALKILDKS
2079232..2079375                   PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; GJE10_10300; phage(gi966201576)     1.77e-18            SalmonellaentericasubspentericaserovarTyphimuriumQKSQDPGIATDDEKAQLDEWKKYRVLVNRVDTSNPDWSEKPASSDYL
2079780..2079792                   attR                                                                                 N/A                 CTCTCTCCGCCAC
2080094..2080255                   hypothetical protein; GJE10_10305                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2080382..2080801                   PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GJE10_10310; phage(gi100117)     5.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
2080804..2082072                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; GJE10_10315; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
2082527..2082739                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE10_10320; phage(gi13095918)                   1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
2086204..2086216                   attR                                                                                 N/A                 TATGCAGGAAAAT

#### region 7 ####
2187761..2187775                   attL                                                                                 N/A                 ACGGCCGAGGCAGCG
complement(2192628..2193326)       PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; GJE10_10930; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2193350..2194006)       carbon-nitrogen hydrolase family protein; GJE10_10935                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2194114..2194344)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; GJE10_10940; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2194482..2194856                   CopC domain-containing protein YobA; GJE10_10945                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2194857..2195732                   copper homeostasis membrane protein CopD; GJE10_10950                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2195749..2196102                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; GJE10_10955; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(2196476..2197330)       PHAGE_Entero_HK022_NC_002166: integrase; GJE10_10960; phage(gi9634144)               1.45e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(2197390..2197884)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; GJE10_10965; phage(gi985761253)     8.72e-21            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2198074..2198304                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; GJE10_10970; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2198358..2198891                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; GJE10_10975; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2199148..2199315)       lytic enzyme; GJE10_10980                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2199380..2199568)       hypothetical protein; GJE10_10985                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2199623..2199883                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; GJE10_10990; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
complement(2200134..2200701)       PROPHAGE_Escher_CFT073: transposase/IS protein; GJE10_10995; phage(gi26248359)       7.35e-62            SalmonellaentericasubspentericaserovarTyphimuriumVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPACSSLMKAICRSVRKKQNCSSGHRTLRKERNDPDIQSAVRAVGSNVRRCSTDLSDAGPYLTPLTCRSNQRRKLSTQTETKGRGYSSSVA
complement(2200910..2201928)       PROPHAGE_Escher_CFT073: transposase; GJE10_11000; phage(gi26248360)                  2.77e-28            SalmonellaentericasubspentericaserovarTyphimuriumMVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLGIPGLYSSTHRRCSSLQKSRQRSLARSETGDIVAEPFSGRSFVLSRFLRSRSLPFGSKLNPDDRCRLTGALCVMVAHRFTCSLLFSDTAECCTSNSLTICVMTRWRPAIVMRSASLVVCRAKCCMTIKLWFCNVTHIRPVSTGSILRCGSSARRWASLPDCVAPSGHRLKVRWNGWCSTPVTVFTSHLACARWGSLSMLKQPTATVCAGCTMSLTNESMKQSSPSLRSLARRAAVHAGTASGKKEYDVHPVKIWTSINTPCIIHSPSTTHSAEEWRGA
2201987..2202874                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; GJE10_11005; phage(gi169257205)     8.57e-90            SalmonellaentericasubspentericaserovarTyphimuriumMDHYCTVRDNVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2202971..2203171)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GJE10_11010; phage(gi169257211)     3.94e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2203741..2203866                   arsenic transporter; GJE10_11015                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2204541..2204687                   PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; GJE10_11020; phage(gi100036)            5.92e-17            SalmonellaentericasubspentericaserovarTyphimuriumIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
2207973..2207987                   attR                                                                                 N/A                 ACGGCCGAGGCAGCG

#### region 8 ####
2208352..2208364                   attL                                                                                 N/A                 TGGGTCATTACAT
complement(2209374..2209742)       PHAGE_Entero_HK630_NC_019723: integrase; GJE10_11050; phage(gi428782814)             1.48e-20            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
2209866..2211060                   PROPHAGE_Escher_CFT073: transposase; GJE10_11055; phage(gi26246249)                  2.88e-162           SalmonellaentericasubspentericaserovarTyphimuriumMDEKKLKALAVELAKGLKTEADLNSFSRMLAKLTVETVLNAELADHPGYEKNAPKTGSNTRNGYSSKTVLCDDGEIELNTPRDRENTFEPQLLKKHQTRITQMDSQILSLYAKGMTTREIVATFKEMYDANVSPSLISKVTDAVKEQVTERQNRQPDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGEKFWLSVLTELKTRGVQDILIACVDGLKGFPDAINSVFPQPHIQLCIIHMVRNSLKYVAWKGYKVATSGLRLRPKRRHWRWMRSRKPGTINIRKSAKAGVRTGKTSIRSSVIRRISARPSTPQTQSNPTASVPRLRNARCSRRMTQYEKLFIWRSRMRQKMEYADPELAAGDEPFYYRVRPPERSPLA
complement(2211206..2211346)       hypothetical protein; GJE10_11060                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFRSKRTLPRNLQPYTGQASTEELHTDLNNMRYTELYSIQQMVLQL
complement(2211512..2211781)       PHAGE_Klebsi_phiKO2_NC_005857: Gp27; GJE10_11065; phage(gi46402113)                  1.11e-09            SalmonellaentericasubspentericaserovarTyphimuriumMKFDNTWNQGVWFALRSATGRPSPQPFSVEDLPALGEEYRRIMKIISAVYTSKKTLSKRWFASAELLNLYLTKYGLSCLNCSRKKTTAC
2212151..2212381                   N-acetyltransferase; GJE10_11070                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDIQITHQVTEFDKEELLTGLRSYNAQFVDFSKNGQLGVYCRNESGEMVGGLIADRKGPWLCIDYLWVSESARNCGL
complement(2212408..2213229)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; GJE10_11075; phage(gi48697274)     2.00e-18            SalmonellaentericasubspentericaserovarTyphimuriumMVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWIQFYNQKRPHRALKMKTPAQAYAEAA
complement(2213226..2213538)       transposase; GJE10_11080                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKEPGKLMARPCWSYAPEKAGLPAGRGRQIG
2213594..2213785                   N-acetyltransferase; GJE10_11085                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLGSKLMAMAEKEGLRKGCVHGLVDTFSFQALPFYEKQGYILQMSLPDFPKVGSQRHYLIKPGL
complement(2214173..2214649)       hypothetical protein; GJE10_11090                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSKDEISYQILYRYSLEKLYSTLARRVDNVLSFALVFLGVGVTINVGSPFILGPGIVGIAILKRVLRFGTRSAQADRQSRAWLKLFNTQHRFPSDKTLFLAFTSLEQDASEVWSMLIGPAIVMTETALGKTPIEPLTAGEKLCAFLSGATKSQLADRN
complement(2214979..2215353)       PHAGE_Entero_HK630_NC_019723: hypothetical protein; GJE10_11095; phage(gi428782855)     9.02e-17            SalmonellaentericasubspentericaserovarTyphimuriumMQERLGHYKDANFNAFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNRKLIKVNSTPNTQLIKLISAKHFSGEHSYEKYCTDLATAGVFKWIVELNQKTRQYWSKDNQLLYIENVVMPL
complement(2215356..2216177)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; GJE10_11100; phage(gi48697274)     1.77e-18            SalmonellaentericasubspentericaserovarTyphimuriumMVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWIQFYNQKRPHQALKMKTPAQAYAEAA
2216529..2216541                   attR                                                                                 N/A                 TGGGTCATTACAT

#### region 9 ####
3040719..3040733                   attL                                                                                 N/A                 GCTACATTTTTATAA
3041039..3041230                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; GJE10_15405; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
3041501..3042187                   virulence protein; GJE10_15410                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
3042172..3042471                   hypothetical protein; GJE10_15415                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGSEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
3042540..3043166                   PHAGE_Pseudo_F116_NC_006552: hypothetical protein; GJE10_15420; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(3043298..3043716)       PHAGE_Stx2_c_1717_NC_011357: transposase; GJE10_15425; phage(gi209447153)            1.08e-05            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTGAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
complement(3043814..3044674)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; GJE10_15430; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKEFFCSTHQTEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
3044926..3045252                   PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; GJE10_15435; phage(gi100034)     5.49e-23            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(3045256..3045837)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; GJE10_15440; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(3045837..3047204)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE10_15445; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNVLRLTGTGDGEILIGWSGVNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAPIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(3047225..3048277)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; GJE10_15450; phage(gi169257320)     7.69e-109           SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADV
complement(3048331..3048573)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15455; phage(gi169257319)     7.64e-54            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(3048612..3051962)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; GJE10_15460; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
complement(3052034..3052738)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; GJE10_15465; phage(gi169257316)     9.79e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQTDNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
complement(3052636..3053373)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; GJE10_15470; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
complement(3053383..3054078)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; GJE10_15475; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
3054168..3054701                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; GJE10_15480; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(3054818..3055315)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; GJE10_15485; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(3055415..3055747)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; GJE10_15490; phage(gi169257311)     3.22e-77            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPPLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
complement(3055744..3056193)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; GJE10_15495; phage(gi169257310)     4.94e-95            SalmonellaentericasubspentericaserovarTyphimuriumGSTVLGMFGFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
complement(3056186..3056896)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; GJE10_15500; phage(gi169257235)     2.07e-162           SalmonellaentericasubspentericaserovarTyphimuriumMTSGERQANNANRAITNGLIALHIPVPLTAVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGNDRIRVVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRNNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVSCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKAKGTCQIDKAANESAHFMRFH
complement(3056868..3057413)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; GJE10_15505; phage(gi169257236)     2.06e-89            SalmonellaentericasubspentericaserovarTyphimuriumMKVNKKRLAEFFNVDPRTIERWQSQGMPLASGGGKGVEAVFDSAAVIEWYAERDASIENEKLRKEVDDLRAAAESDLVPGTIDYERYRLTRAQADAQELKNAERKSEVMDIELFTYILQRIAQEIVGILSRLPLTLQRKYPDLTTEHIDAIKTEIAKASDKAATIADVEKWVDDFRRTSGE
complement(3057882..3058328)       PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; GJE10_15510; phage(gi966201480)     6.43e-92            SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCSVPTRTETASTRRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYVRTQCE
complement(3058346..3058796)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; GJE10_15515; phage(gi169257296)     4.34e-13            SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGEILDDWLWLDPLCRASARNDDRGYCRALANWFSRLKCVQTGGQVDARPVCAGVVRVQPRRPDIILINSAAEAKRWLRRRRVPALEGWWQSTERAYPSAGGACSVPVMA
complement(3058780..3059109)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; GJE10_15520; phage(gi169257295)     7.80e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGAIRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
3059385..3060071                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; GJE10_15525; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
3060432..3060881                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15530; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(3061017..3061142)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15535; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(3061337..3062025)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; GJE10_15540; phage(gi169257244)     3.83e-14            SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSRGDRAAFGRLENAQFDTKNYPRKNSVYGTRKQKAGRITRQSPASSRWRKEALSRWSLWNIPLPHGAGRFFHSMNTTRRGCCGITVRIPAGNTRSKHVGRGASSDSSLQGGRWLARQWNGRNLSGWRRRMSERGWPDDTSTSNRSLPACAGLSLTTGATTMRTTGARVTSLRGLIPNLCFVWKQDHNKKRPFRSRVLQKSIAA
complement(3062022..3062162)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15545; phage(gi169257289)     2.98e-12            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
complement(3062176..3062769)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; GJE10_15550; phage(gi169257288)                 8.09e-141           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAHEAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRTTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALK
complement(3062975..3063577)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15555; phage(gi169257286)     2.22e-145           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNEGALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(3063662..3063883)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; GJE10_15560; phage(gi169257285)     2.26e-30            SalmonellaentericasubspentericaserovarTyphimuriumMADIVQSDLADNFRVTITNGRGLEVLSFRIRAEERYIITSRDGAVTPRKLSRDDLYWSKETIMEVVREMASKN
complement(3063993..3064226)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; GJE10_15565; phage(gi169257284)     3.91e-30            SalmonellaentericasubspentericaserovarTyphimuriumMKVELTIDRTKKLPDGAEAALEKELLKRLNNQYEDCSLVIRRAGSDGLNVYGAAKDDKKQIEMILLETRESADDWFY
3064930..3065627                   PHAGE_Entero_P1_NC_005856: InsA; GJE10_15570; phage(gi46401643)                      3.53e-60            SalmonellaentericasubspentericaserovarTyphimuriumVASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSRPRAYSRAVTSSSARKWTNSGDTSGLNRASAGCFTRMTGSGRRLLRTYSVNALWRRWGVLACCHPLTWYGRMAGRCMNPARESCTSASDIRSELSGITIGSTWHGWDGSRCRSQNRWSCMTKSSGIITNTINAA
3065624..3066190                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; GJE10_15575; phage(gi90592714)     1.17e-05            SalmonellaentericasubspentericaserovarTyphimuriumMSWSHYRLLFVSLFIMSYDKNLFVSISTYLDSKDTGTLLSSITPKNIVFISSFAMIVAGVLIFLYLLLSFNSGWSVACTVSDVRNESHEHLEFLTTYVMPLVFTDVNSKRTMLNLLIMIVAIGMIYVKTNRFYSNPSLALLGFRIFKANINDRGTKEFVIICHGEIDNNSRIKYIKLDNNTCLAKITQ
3066202..3067179                   DUF4868 domain-containing protein; GJE10_15580                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFTAIDNILNSTQLSGEAYFVAEHQGQLDIFRVALEPGAEQKLTQSFSRSLKRDVVDPNTGQNTLPLVSSLLSRDKQVHEYDHQVINYLPPALAKMADVLSFGVNNTPTDFDFAQQNLSTVKGIVYYLCDGQGNGVVVYQHKYPIALHKKTKLSYFSANGRTLDEVTHDSIDINGNVDFFYFDNKYYALNINLLERAYGLEQVINNLAANATPHIIALNILDVSNHPNPADIFNDMHRNRNFMRRLATTANSPLLQNGTINIANIQTLIQNFPILGRNIIINQAGLIELSSKKQKLYFIRLLNNEASFTALNLEPFLAVGKDSAA
complement(3067234..3067491)       PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; GJE10_15585; phage(gi100124)     1.62e-08            SalmonellaentericasubspentericaserovarTyphimuriumMDQLLQYATNRIIELESLLLVDIQETVWPTEVKMVFSQVDNAGDLPAHHQRRLLHHINRMWLEKMPESDTFLAASEPGPIAFAFR
complement(3067491..3068135)       PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; GJE10_15590; phage(gi423262432)     2.62e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTTITREQQKQILIDTANHVISRDNTSPYSENLRELARIALAQLIAEPVERDGADADPVVFTDERNLHHIARGRETSLIWGKQNQEVGDIPLYRHAQPAPVVPEEIPKGLADQIVSLLAHNIGDKFLAQKIWNACRAAMLQGNQAPVKQPSSNSENVPVISDGWVMVPVELTDDMIAAAMNCDDVLFNRDESFCVQFGNIYAAMIAAAPQQEAE
complement(3068139..3068447)       PHAGE_Caulob_karma_NC_019410: hypothetical protein; GJE10_15595; phage(gi414089390)     1.27e-06            SalmonellaentericasubspentericaserovarTyphimuriumMKTKKYDERKDLDLWFGLSYAAFLVMPRVAMMQMPEEWREKMAELLNQYDETIDTAAFGVKGCRVNALTGDGKLMKMPAELLNYRHPQPETVEALLLSKGEG
complement(3068451..3068909)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE10_15600; phage(gi169257282)     1.63e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPRTMLALLDENIQLQRGKDAIEAVALALRDDMRDAREKLEAAEHRIAEHRKVLNSIAAVARRYLPDYDEHPEIQAADELLESAAGIGVKGE
complement(3068878..3069252)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15605; phage(gi169257281)     6.82e-74            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTHSERTIILERIIGLVKEQWRITTNDVVAMFGVHRTTAEKYLQIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGEPNEQHRQTGAS
complement(3069263..3070012)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; GJE10_15610; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
complement(3070015..3070996)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; GJE10_15615; phage(gi169257279)     9.65e-44            SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIRDALCIVELSGREFRVLNAIIRLTYGWSKKKIVLPTASLQIRQHRSTYPKRCVLPIVTSLSCAVLVKQDTGLIQTRINGLIPSHIAQNVRCLFLMMKLPHGLFLYSKPGIVIPEKGEGHPRKQGLSLKTGIAFYPIQPSLKTGIVIPEKREGYPRKQGTPKTLFQRQIKIPLSPGKSEVSVEYSCSRMAECCVVERMGHLPPAIRKAHKNRTDGNKSFQASEGVPGRPRSGKRHQHKHCQRLPGTIQTEVRSQRPKSWQRCEPHFCARQNHSYRIQGVA
complement(3071081..3071401)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; GJE10_15620; phage(gi169257278)     1.49e-72            SalmonellaentericasubspentericaserovarTyphimuriumMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(3071436..3071663)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; GJE10_15625; phage(gi169257277)     5.71e-17            SalmonellaentericasubspentericaserovarTyphimuriumMNADLKSFICSIMSQTELAKRLGTTPQSVSLWLNSEAPAHRVIPICEALNWKVTPHQMRKDIYPNPTDGLPDQQD
3071769..3072203                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; GJE10_15630; phage(gi169257276)     1.25e-42            SalmonellaentericasubspentericaserovarTyphimuriumMMNMKTEQHENFVRRLQLIQDQTGWNLSEIARRVMVSPQAVQQWAKGDTTPRGERLKRLAAVTGKPEHWFFMPLDANEPSNSLSEIPTSSSRDMLDDKEKALLALFNQMPEAEKNRLIVHAKATLQELDLLKDDVLSIIKNIRE
3072500..3072630                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15635; phage(gi169257274)     1.77e-07            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKTSFSIATARNWRAKKRNIVPGSALAA
3072679..3073029                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15640; phage(gi169257273)     7.04e-45            SalmonellaentericasubspentericaserovarTyphimuriumMKDSPLIWRGFLHPEFKTGELMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKIDYSEKFYQTIH
3073156..3076353                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; GJE10_15645; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTRTQIPSVTLPSSEAAAARQHIVDGVDTETGEVLEDHNENFGNESNSPSPAKAPAPELTVVATMPLRHRVLAQHIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKRMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYAYAPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPAGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELYEARKNIPPKSPVDVGKQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSACRTHQLMAQKRIRRSPAMCRFKKLTVMKNRLVMRCRQAKAIWVLVKKQLPRTRIRLRRTRTTILANLNLRRNKTYRNRNKKSQKQPGRNTSSRAAMKVYQTRFTTPPTGSAQLRKMLACRCTLTRVTRRLSSKSALQCLIWATLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDPVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
3076316..3077470                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; GJE10_15650; phage(gi169257271)     6.95e-81            SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRHRKSHAIKTVKMGSTPSLSAFVAGQMRTRSACSFRLVPFCEVNLKSHRENLFTSPALLPAILRYGFQTLNSKLPIWALNIGLACTARKSSACTALMRLSNEKNARLTLLQSSAAYRKSPARLAPDQRAGVGSRCCCRRSSRTHYSKFRSGKSNPCGYRITESVAGYCAVHRIKKQSSEALLPCRCTEQSRGSDQLNSKPRRTGSRRDVCSKHAWRCTSSWRRTARVPRPPDDMKPEYIG
3077513..3077752                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; GJE10_15655; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
3077793..3078041                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; GJE10_15660; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
3078086..3079378                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; GJE10_15665; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMIAAQ
3079413..3079427                   attR                                                                                 N/A                 GCTACATTTTTATAA
3079573..3080775                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; GJE10_15670; phage(gi100242)     6.53e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQYLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 10 ####
3151481..3152736                   PROPHAGE_Escher_CFT073: transposase insF; GJE10_15960; phage(gi26249410)             1.83e-39            SalmonellaentericasubspentericaserovarTyphimuriumMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
complement(3153199..3153693)       PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; GJE10_15965; phage(gi300116744)      2.35e-18            SalmonellaentericasubspentericaserovarTyphimuriumMQKFNKKSKGGPNGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(3153848..3156124)       PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; GJE10_15970; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
complement(3156155..3156475)       PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; GJE10_15975; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumMGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
3156799..3157020                   PHAGE_Lactoc_bIL312_NC_002671: Csp; GJE10_15980; phage(gi13095918)                   1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
complement(3157150..3159096)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; GJE10_15985; phage(gi371496158)      2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE

#### region 11 ####
3774859..3775638                   PROPHAGE_Escher_MG1655: IS3 transposase B; GJE10_18990; phage(gi16128284)            6.35e-160           SalmonellaentericasubspentericaserovarTyphimuriumYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSREIMRTAVFNYSECDYNRRRHSACGGLSPEQFENQNLA
3775889..3775934                   attL                                                                                 N/A                 TGGTGCCGATAATAGGAGTCGAACCTACGACCTTCGCATTACGAAT
3776223..3776585                   PHAGE_Entero_UAB_Phi20_NC_031019: RNA polymerase sigma factor; GJE10_18995; phage(gi100049)     4.23e-83            SalmonellaentericasubspentericaserovarTyphimuriumMLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNATTTTLRYMMYVGFMGTLSAVVGWMADQCSLPPLITLITFSAISLVCGFIYSRFIVFRDIR
3776582..3777514                   PHAGE_Salmon_ST160_NC_014900: GtrB; GJE10_19000; phage(gi318065903)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRPKYILKRKGFKSEI
3777504..3778961                   PHAGE_Salmon_ST160_NC_014900: GtrC; GJE10_19005; phage(gi318065902)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKFNSNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGRSLYGGLGWSGNGRPLSDFIFYIINFGTPIIDASPLPLMLGIVILALALSCIREKLFGDDYITASLCFMMILANPFFIENLSYRYDSLTMCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIFLLAFIISDVVKKNSISNITKNTASSVAGLIVGYFAYSYFIAKRLVTGSYNIEHSKIIEINSSLFEGIISNVLSFYRMFSTILNGDNYLIYYSLFFALIISLIVIVLKVIKRDENKKTKFLLVVLILLASMFFIIGPMIFLKSPIYAPRVLIGMGGFMFFCCLCVFYAFEDKQLISRIYFSFILLISTIFSYGAYNAINAQFQLEESIVNRISQDIDHLGFGRDKKNIKFIGTEPYASINENIVIKHPLMRELIPRIINNNWMWSEVLMQRNVFSRNYRLYDKEVKLENGWKKSGNNVYDIGVVGETIVVRFN
3779007..3779018                   attL                                                                                 N/A                 TTTTATTACATA
complement(3779020..3780741)       PHAGE_Salmon_ST160_NC_014900: Gp9; GJE10_19010; phage(gi318065964)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSEYPTLQDAASAAVDGLLIDVDYHFYNGEKVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQGLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGPGSGSAWTQLTAISGNTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
complement(3780810..3781295)       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; GJE10_19015; phage(gi41057343)     5.16e-13            SalmonellaentericasubspentericaserovarTyphimuriumMQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWISFTTRSVLTGR
complement(3781190..3781429)       hypothetical protein; GJE10_19020                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPGSRPCLRWPQRPTNAGRRTYAGSGLVAMAGVPWRW
complement(3781585..3781875)       transposase; GJE10_19025                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELRGSLWRGHAGVTRQKKLASLLGEDDR
complement(3781955..3782239)       PHAGE_Salmon_ST160_NC_014900: Gp9; GJE10_19030; phage(gi318065964)                   1.99e-58            SalmonellaentericasubspentericaserovarTyphimuriumMTDITANVVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQIAQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDA
3782375..3782626                   PHAGE_Salmon_ST160_NC_014900: Mnt; GJE10_19035; phage(gi318065963)                   1.32e-54            SalmonellaentericasubspentericaserovarTyphimuriumMGRDDPQFNLRLPYELKEKLKQRAKSNGRSLNAELVQIVTEAISKPSPVSGYRDEAERIADEQSELVKKMVFDTLKSLYKKPT
3782726..3782905                   PHAGE_Salmon_SE1_NC_011802: hypothetical protein; GJE10_19040; phage(gi219681256)     3.68e-36            SalmonellaentericasubspentericaserovarTyphimuriumMAKKPGENTGKNGGIYQEVGPRGGKKDNFATVKDNERLPPTTKPGHGWVLDKRTPDSKK
3783161..3783475                   transposase; GJE10_19045                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELREAYGEAMLELRARKKLASLLGEDDR
3783472..3784293                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; GJE10_19050; phage(gi48697274)     2.00e-18            SalmonellaentericasubspentericaserovarTyphimuriumMVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWIQFYNQKRPHRALKMKTPAQAYAEAA
complement(3784319..3784501)       PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19055; phage(gi318065962)     1.24e-39            SalmonellaentericasubspentericaserovarTyphimuriumMKKVNIGNVPKMLVPLFESGTIVFCRDFPEWQRLHQKLGVDVQDSDANGASHTMSSENGVL
3784532..3784861                   hypothetical protein; GJE10_19060                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLEIIVFVLGIACCALYAELVALKKKVKALDHQYEIDAKIERLTEENTHLKNSIRTLTDDNYKLSNALAKWEIVSYERMTDMIFSSYMATKSPETSGKGIIAAIEKRIK
complement(3784879..3786792)       PHAGE_Salmon_ST160_NC_014900: Gp16; GJE10_19065; phage(gi318065961)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANAWKDVIASQQYQALEPEQKAQAQEQYFNEVVAPQAGDQAEQAKQAFYAAYPVPTTQQQSSQQEEPQQPEQSLMQRAGDFLTGGQSAGQIAEQAGRGIVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGAGVAGNMAIGSVAEAANQQGDFAGNVAKNAAINLGAQGALSAVAKGIGRGITAVKGTIAPEAKQLINTAESMGITPMTSDIARPVNEMGALGKGLVQGGEGAILGTGSKRAEQYATRSKLVSNYLDRFGEYNPDDVVQSLTRTLKGRKDAAGAVINDVTNKMGNAAIDTSNTMNALNTAIARQERLGSSANKNLLSSLRSLRDEIINPATDLDMTFDLLRQHRTAFRSNVQGDSMVFPNQAKAATIMVENAMSRDLRNAVGKSLGASDAAAYLKANSDYANVYNKVLNKNIANKLNKASNEATPELINSVVYSRKPSDVKRIWSALDGKGKDAMRAAYISKIAEKTGDSPAKFITEVNKLKAQSGGEIYNTIFSSRHMKELDALHDVLRQTARSDSANVVTQTGQALANPVRLGAAIPTLGKSLAAEVGYGLAMRVYESKPVRNMLLRLANTKPGTPAYERALNQAATAVRPLLANQATQQ
complement(3786792..3788075)       PHAGE_Salmon_ST160_NC_014900: Gp20; GJE10_19070; phage(gi318065960)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNDLARSGANNVALTGLRGMAGVADIYKQEQQQKALNAFNQVHANAWATGDPSGLFKFAQENPAFVAQAQQAFSGLNEQQRNDMGDLAMKANVALSQGPESYSKFITDNKDRLNRVGANPDWMIQTGVQNPEQLSHMLTTMSLGALGPEKAFAVQDKMVGREIDRGRLAETIRSNQAGEALQQRGQNISAKNAELSREIQRAELQDKVLDRQIARETNQIKLDELKQKQADVRQKAEIARADRQAAAQGAVDTFSTALDSLNEIEQSPGLSKAVGIRSAFPTVPGSDAANFEARLDTFKAQTFLPMVQSLKGMGALSDAEGKKLSDAVGALSPKMSEKAFRESIGKIRNQLESKLSTVKKQFDYQEPVQNMPGKQSPAGSNFSSLWGD
complement(3788086..3788775)       PHAGE_Salmon_ST160_NC_014900: Gp7; GJE10_19075; phage(gi318065959)                   1.60e-156           SalmonellaentericasubspentericaserovarTyphimuriumMLYAFTLGRKLRGEEPLSPGKGGKGGADKSAKYAAEAQKYAADLQNQQFNTIMNNLKPFTPLADKYIGSLEGLSSLEGQGQALNNYYNSQQYQDLAGQARYQNLAAAEATGGLGSTATSNQLAAIAPTLGQQWLSGQMNNYQNLANIGLGALQGQANAGQTYANNMSQISQQSAALAAANANRPSAMQSAVGGAASGALLGGGIANALSMSTPWGAAIGGGIGLLGSLF
complement(3788778..3789233)       PHAGE_Salmon_ST160_NC_014900: Gp14; GJE10_19080; phage(gi318065958)                  1.20e-108           SalmonellaentericasubspentericaserovarTyphimuriumMITFTPTRNIDLIEMVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYNEIQPLTFDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYAATREELIDFLNHGR
complement(3789233..3789934)       PHAGE_Salmon_epsilon34_NC_011976: Tail accessory protein; GJE10_19085; phage(gi221328627)     1.38e-149           SalmonellaentericasubspentericaserovarTyphimuriumMADPSLNNPVIIQATRLDASILPRNVFSRSYLLYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVELADHEERIQQLRIDVDDHEIRITANANAIAVLDVRLTTAEGKIVTLQADVSALDGRVTAAESTISSLQADYVSKSATASQSLASPLNVTTSYSVGGTKVIGARQAGWTAATGTALLGAFNANQAYTVSATYTQSEVSAMATGLQQARQRIKALEDAIRTHGLIN
complement(3789938..3791356)       PHAGE_Salmon_ST160_NC_014900: Gp10; GJE10_19090; phage(gi318065956)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLDSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTADELATGVMEALRLDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
complement(3791316..3791816)       PHAGE_Salmon_ST160_NC_014900: Gp4; GJE10_19095; phage(gi318065955)                   9.92e-122           SalmonellaentericasubspentericaserovarTyphimuriumMQIKTKGDLARAALRKLGVASDATLTDIEPQSMQDAVDDLEAMMAEWYQDGKGIITGYIFSDDDNPPAEGDDHGLRSSAVSAVFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAIARAKRAPYPSRMPTGSGNSFANLNEWHYFPGEQNADSTTPHDEGNG
complement(3791800..3792360)       PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19100; phage(gi318065954)     9.40e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGVMLYKQGRGTKVWGKEVQAKVVDDSDVEDHLDDGWVKHPNEVPETNDEPIGESGVAKKDMGEVSDGYHTFNELYAHRVRLFSTLMNAFPESAWWSFQHHDGEQWDGWVLAGIDTPKGAVTYHLPESEIEHLPKGTEIEFGKEWDGHTADDVLNRLLSLRPKEPATKERKKPGPKPKAESDADKD
complement(3792401..3793693)       PHAGE_Salmon_ST160_NC_014900: Gp5; GJE10_19105; phage(gi318065953)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMALNEGQIVTLAVDEIIETISAITPMAQKAKKYTPPAASMQHSSNTIWMPVEQESPTQEGWDLTDKATGLLELNVAVNMGEPDNDFFQLRADDLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVITSPDAIGTNTADAWNFVADAEELMFSRELNRDMGTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPVLTKSTATGITVSGAQSFKPVAWQLDNDGNKVNVDNRFATVTLSATTGLKRGDKISFTGVKFLGQMAKNVLAQDATFSVVRVVDGTHVEITPKPVALDDVSLSPEQRAYANVNTSLADAMAVNILNVKDARTNVFWADDAIRIVSQPIPANHELFAGMKTTSFSIPDVGLNGIFATQGDIFTLSGLCRIALWYGVNATRPEAIGVGLPGQTA
complement(3793693..3794604)       PHAGE_Salmon_ST64T_NC_004348: scaffolding protein; GJE10_19110; phage(gi24371586)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMEPTTEIQATEDLTLSGDHAAASADSLVVDNANDNAGQEEGFEIVLKYDETAPKQDPAKNAEFARRRIERKRQRELEQQMEAVKRGELPESLRVNPDLPPQPDINAYLSEEGLAKYDYDNSRALAAFNAANTEWLMKAQDARSNAVAEQGRKTQEFTQKSAQYVEAARKHYDAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKARQLLAMDGQSALIELTRLSERLTLKPRGKQISSAPPADQPITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR
complement(3794618..3796795)       PHAGE_Salmon_ST160_NC_014900: Gp1; GJE10_19115; phage(gi318065951)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADNENRLESILSRFDADWTASDEARREAKNDLFFSRVSQWDDWLSQYTTLQYRGQFDVVRPVVRKLVSEMRQNPIDVLYRPKDGASPDAADVLMGMYRTDMRHNTAKIAVNIAVREQIEAGVGAWRLVTDYEDQSPTSNNQVIRREPIHSACSHVIWDSNSKLMDKSDARHCTVIHSMSQNGWDDFAEKYDLDADNIPSFQNPNDWVFPWLTQDTIQIAEFYEVVEKKETAFIYQDPVTGEPVSYFKRDIKDVIDDLADSGFIKIAERQIKRRRVYKSIITCTAVLKDKQLIAGEHIPIVPVFGEWGFVEDKEVYEGVVRLTKDGQRLRNMIMSFNADIVARTPKKKPFFWPEQIAGFEHMYDGNDDYPYYLLNRTDENNGEMPTQPLAYYENPEVPQANAYMLEAATAAVKEVATLGVDAEAVNGGQVAYDTVNQLNMRADLETYVFQDNLATAMRRDGEIYQSIVNDIYDVPRNVTITLEDGSEKEVQLMAEVVDLATGERQVLNDIRGRYECYTDVGPSFQSMKQQNRSEILELLGKTPQGTPEYQLLLLQYFTLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGNEQTHKQRMDIANILQSQRQNQPSGSVAETPQ
complement(3796795..3798294)       PHAGE_Salmon_ST160_NC_014900: Gp2; GJE10_19120; phage(gi318065950)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWVGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTPEGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWDKDADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQLKTQYADAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKAFNTCEPFFEEFRLYHRDENGKIVKTNDDVLDATRYGYMMRRFARMMRDIRKPKEKKIPAPIRPVRRGR
complement(3798272..3798760)       PHAGE_Salmon_ST160_NC_014900: Gp3; GJE10_19125; phage(gi318065949)                   9.07e-119           SalmonellaentericasubspentericaserovarTyphimuriumMAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWVEANPLWEMKAFSYQGEVTQEPIAKMRAMTITGLTLFLDVTLETWRQYRVREDLSEVVTRAEQIIYDQKFSGAAADLLNANIIARDLGLKEQSQFEDVTPDKGDRDKRRSRIKELFNRGTGRDS
complement(3798764..3799168)       PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19130; phage(gi318065948)     5.63e-93            SalmonellaentericasubspentericaserovarTyphimuriumMANPNFTPSWPLYKDADGVYVSALPIKAIKYANDGSANAEFDGPYADQYMSAQTVAVFKPEVGGYLFRSQYGELLYMSKTAFEANYTSASGSVANAETADKLSTARTITLTGAVTGSASFDGSANVTIETTSGS
complement(3799168..3799557)       PHAGE_Salmon_ST160_NC_014900: hypotthetical protein; GJE10_19135; phage(gi318065947)     2.21e-94            SalmonellaentericasubspentericaserovarTyphimuriumMAKTKWPKLPRFFVPLFHSANVYLCRSKEEWDQACIHLGVGSGGNEMLAGATQSYCNTETGENLYLLGVFNGEAATLVHECAHVAFYVCRDVGVTTYPGDANETYCYMLDRMFSHFLPFFHEPEKEGAK
complement(3799561..3799803)       PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19140; phage(gi318065946)     4.83e-48            SalmonellaentericasubspentericaserovarTyphimuriumMAEITALTELQQMNLDILRLVQSDTAAAEKAIAFVAGSKLNFELFKDQLVLAQGEGTALARAEKAIREAKEALDLFTAGA
complement(3800026..3800556)       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; GJE10_19145; phage(gi219681238)     6.90e-129           SalmonellaentericasubspentericaserovarTyphimuriumMKYPTVMVNGVSVRVDEDGRYNLNDLHAAAVANGEATEQQRPSQFLCSAQIKRFIKALEAKVQKSTLKQIQPLKIIKGGTEPGVWGVELLAIRYAAWIKPEFEIEVYEVFKTIVRLGVGAMSRLNKIDHIISTETKAISQCASQMAKWGVGGRTRLLHVARERAANEVQMYLPGMV
complement(3800769..3801236)       PHAGE_Entero_ST104_NC_005841: gp15; GJE10_19150; phage(gi46358690)                   1.00e-109           SalmonellaentericasubspentericaserovarTyphimuriumMSRLTSIISALVICIIVCLSWAVNHYRDNAITYKVQRDTVTQKLALANATITDMQTRQRDVAELDARYTKELADAKAENDALRRKLDNGGRVLVKGKCPVSSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQAALRTLQEYIRTQCLK
complement(3801233..3801730)       PHAGE_Salmon_SE1_NC_011802: Gp19; GJE10_19155; phage(gi219681236)                    1.83e-119           SalmonellaentericasubspentericaserovarTyphimuriumMSPALRNSVMAAISGGAIAIASVLITGPGGNDGLEGVRYKPYKDVVGVLTVCYGHTGKDIMPGKTYTEAECKALLNKDLITVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREVERDVCLWGKQ
complement(3801708..3801911)       PHAGE_Salmon_SEN22_NC_028696: class II holin; GJE10_19160; phage(gi966201365)        7.09e-43            SalmonellaentericasubspentericaserovarTyphimuriumMYRMDKIREWFSYSFGGLTAMGGILSLNDWAVIIGILCTVGTFGINWYYKRKEREDRLNGNVTGTTK
complement(3802157..3802232)       tRNA                                                                                 N/A                 GCTGGTTTAGCTCCAATGGTAGAGCAGTCGCCTTGTAAGCGAATGGGTAGCGGTTCAAGTCCGTTAACCAGCACCA
complement(3802238..3802312)       tRNA                                                                                 N/A                 GGGTCGGTCGTATAAAGGTTATTACGGAAGGCTGTTAACCTTCTTATCGTGGTTCGAGTCCACGCTGTCCCGCCA
complement(3802448..3803221)       PHAGE_Entero_ST104_NC_005841: gp23; GJE10_19175; phage(gi46358687)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLENTVKFHSPKSPQLSDSPRATASDSLTNTDVMAAFGMVQSRAPLGFSAFSGKMNLSDNDKRKAIQLLVQHGMKHCDKVAALRKLDTNVKGKVVQTLATFAYQDYCRSAASNVMCSCCKGSGVLRKKERIVKHPGCGEKTPARTAVEVTESLCTKCNGAGVVSTSCVKCRGRGVALDRKKSELQGVPVYSPCKQCSGRGYERIPAASCFRAICQFTDAISPGVWDKAIKPFYESLISNVEMEESAANVVLSKVTS
complement(3803379..3803621)       PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; GJE10_19180; phage(gi327198622)     1.30e-33            SalmonellaentericasubspentericaserovarTyphimuriumMTREYVKKIKYPCETAAIFQDVVFVMRVNDATELLSAADRAAEFYLSYFPFCELEDVRKGVRYSFGGLYLRDDHIIREAA
complement(3803618..3803800)       PHAGE_Salmon_g341c_NC_013059: NinZ; GJE10_19185; phage(gi255252738)                  2.21e-35            SalmonellaentericasubspentericaserovarTyphimuriumMCSITSINHAKQQRERDEAELRSVREMTEQHQKAMDYLHERERELVNRLGLNKSTGGDAA
complement(3804239..3804475)       PHAGE_Salmon_g341c_NC_013059: hypothetical protein; GJE10_19190; phage(gi255252736)     1.30e-50            SalmonellaentericasubspentericaserovarTyphimuriumMNSVKSYSPREQDYIRRVAGKVPADVMAAALGRTRNSLVNWANRHGISLRVPYGILKKHWPEYAEKMTKGGRNGAKER
complement(3804468..3804644)       PHAGE_Entero_HK446_NC_019714: NinF protein; GJE10_19195; phage(gi428782243)          1.42e-32            SalmonellaentericasubspentericaserovarTyphimuriumMLSQTQILQYQKESVERALTCANCGQKLHVLEVHVCDHCCAELMSDPNSSMYEEENDE
complement(3804637..3805038)       PHAGE_Escher_PA28_NC_041935: clamp-loader subunit; GJE10_19200; phage(gi100041)      1.55e-84            SalmonellaentericasubspentericaserovarTyphimuriumMLLIQPGFGLSIKKGHMFGEKESQRKMVSIRLPFISIYWLNREATNYWYICARSAFNDPDWFIENHHAVRQAKRKATITKMKAYRDAWEEHRNRYQKDIEKLESENTELKRRLGEAKRDIDAYKRLVGGDSHA
complement(3805041..3805217)       PHAGE_Salmon_ST160_NC_014900: NinE; GJE10_19205; phage(gi318065935)                  9.17e-36            SalmonellaentericasubspentericaserovarTyphimuriumMARQRRSITDIICENCKYLPTKRSRNKPKPIPKESDVKTFNYTAHLWDIRWLRHRARK
complement(3805354..3806226)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: NinC protein; GJE10_19210; phage(gi399528823)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMMNVVSFSGGRTSAYLLWLMEQKRQAGEDVHYVFMDTGCEHPMTYRFVREVVKFWDIPLTVLQVDINPELGQPNGYTVWEPKDIQTRMPVLKPFIDMVKKYGTPYVGGAFCTDRLKLVPFTKYCDDHFGRGNYTTWIGIRADEPKRLKPKPGIRYLAELSDFEKSDILDWWKEQPFDLQIPEHLGNCIFCIKKSTQKIGLACKDEPGLERVFNEVITGAHVRDGHRQTSKEVMYRGHLSLDGIAKMYADGDYQTLYQEMVRAKRFDTGSCSESCEIFGGQLDFDFGQDAA
complement(3806223..3806663)       PHAGE_Entero_mEp234_NC_019715: NinB protein; GJE10_19215; phage(gi428782300)         1.97e-102           SalmonellaentericasubspentericaserovarTyphimuriumMKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVNWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEALLALEWKARWGDKAA
complement(3806737..3808113)       PHAGE_Salmon_103203_sal5_NC_031946: rnaseH; GJE10_19220; phage(gi100048)             0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRQDIEASVIGGLLIGGLTPTASDVLATLEPEAFSIPLYRKAFEVIRKQARNRNLIDGLMVAEECGDEYATAVMMTARSCPSAANLKGYAGMVVDSYQRRQVLQLLDEMREPISNGTLDASGRAMDDLVKRLSAIRKPRDEVKPVRLGEIISDYTDTLDRRLRNGEESDTLKTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRVIPGSGVRRGVLIFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLADLDVWVVDASRLSVEEIRSISERHKQEHPNLSLIMADYLGLIEKPKAERNDLAIAHISGSLKAMAKDLKTPVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEIIVTKNRFGSLGTVYQRFCNGHFVACDQDEARQICTASNAPDGRRKRYAQGADV
complement(3808110..3808943)       PHAGE_Salmon_BTP1_NC_042346: sliding clamp DNA polymerase; GJE10_19225; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNLATVTPIKPHLEVVEHRVAELDDGYTRTANTLLEAVMLSGLTQHQLLIVMAVWRKTYGYNKKIDWIGNEQFAELTGMAPTKCSTAKNELIRMGVLTQVGRQVGMNKNISEWKTKVNGFGKTFTRSVKLTFTKSVKTNLPNQSNTKDNIQKTINTNTPLPPNGGGNGQVKPERRKAERIDYESFLNAYNTEVGDRLPHAVSVNEKRKRRLKKIIPQLKTPNVDGFRAYIRAFVHQAKPFYFGDNDTGWTADFDYLLREDSLTGVREGKFADRGIA
complement(3808936..3809082)       PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19230; phage(gi318065928)     2.51e-27            SalmonellaentericasubspentericaserovarTyphimuriumMPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
complement(3809182..3809963)       PROPHAGE_Escher_CFT073: transposase/IS protein; GJE10_19235; phage(gi26248359)       5.90e-124           SalmonellaentericasubspentericaserovarTyphimuriumVMMELQHQRLMALAGQLQLESLISAAPALSQQAVDRGMELYGLLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFRSSLNVTKRAQSHPICRSGSGIKRSPVMQHPQRCWTVSYTTHMSFKSKEKAIDSDRNERPGLLKLILSAA
complement(3809960..3810978)       PROPHAGE_Escher_CFT073: transposase; GJE10_19240; phage(gi26248360)                  2.30e-28            SalmonellaentericasubspentericaserovarTyphimuriumMVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLWMNTGIIFVNASPMLILTKSRQRSLARSETGDIVAEPFSGRSFVLSRFLRSRSLPFGSKLNPDDRCRLTGALCVMVAHRFTCSLLFSDTAECCTSNSLTICVMTRWRPAIVMRSASLVVCRAKCCMTIKLWFCNVTHIRPVSTGSILRCGSSARRWASLPDCVAPSGHRLKVRWNGWCSTPVTVFTSHLACARWGSLSMLKQPTATVCAGCTMSLTNESMKQSGPSLRSLARRAAVHAGTASGKKEYDVHLVKIWTSINTPCIIHSPSTTHSAEEWRGA
complement(3811071..3811352)       PHAGE_Salmon_ST160_NC_014900: C1; GJE10_19245; phage(gi318065927)                    1.45e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNVVATKSKKAARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
complement(3811463..3811678)       PHAGE_Salmon_SEN22_NC_028696: putative repressor protein; GJE10_19250; phage(gi966201352)     1.15e-47            SalmonellaentericasubspentericaserovarTyphimuriumMSNLRKIRETMKVSQAVLAEKVGCTQGAIGHYESGRRHPDLRMCRQLVEALNSFGANVQLDDVFPPELNAA
3811797..3812459                   PHAGE_Salmon_SEN22_NC_028696: putative repressor protein; GJE10_19255; phage(gi966201351)     1.06e-162           SalmonellaentericasubspentericaserovarTyphimuriumMKTPWNELAKARMKQIGLTQDKLAEALGKTQGAIGHWLNGRREPSIEDIAAIMKQLGLKELVLSSDGMVDYPDSNLNNVSSPRPHTEIRRFPLISWVSAGNWCEAVEPYQLREIEVWPETTAHASERSFWLTVRGDSMTSPTGLSIPEGMQILVDPAIEPTNGRLVVAKLESENEATFKKYIVDAGQKYLKPLNPSYHMIPINGNCRIIGVVIEAKWQGL
3812702..3812782                   tRNA                                                                                 N/A                 CGGTGTGTAGCTCAGCAGGTAGAGCGGATTCGTGGGCCCAGCCGTGGAATCGCGTCACCAGTTCAAGCCTGGTCACACCAC
3812811..3813113                   PHAGE_Salmon_SE1_NC_011802: Gp24; GJE10_19265; phage(gi219681213)                    1.43e-66            SalmonellaentericasubspentericaserovarTyphimuriumMTVIVYGKSTFAGNAKTRRHERRRKLAIERDTICNIIDSIFGCDAPDASHEVKSKRIDRVTKAISLAGTRQKEVEGGSVLLPDVALYAAGHRKSKQITAR
complement(3813126..3813713)       PHAGE_Salmon_SEN22_NC_028696: superinfection exclusion; GJE10_19270; phage(gi966201349)     2.95e-142           SalmonellaentericasubspentericaserovarTyphimuriumMNNSWWQELMHFFLQGMTLKQLIHMLIILILLIVVMPVSVKEWVNLHNPEILPHYWMYYILLFCVSYVLNGVFNSVYHAVTERIEALTAQRRKAREEKVVRDLFDSLTPGERAYLAFAVAANNQLKTEKGSPESISLLEKGLITRLPSVIGYPDIDRFVIPEKYFNGCYMRFAGKSDILMNELIAQDEQAKKITT
complement(3813974..3814795)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; GJE10_19275; phage(gi48697274)     2.00e-18            SalmonellaentericasubspentericaserovarTyphimuriumMVADVQQGLRAEGIDVSVSKLCRWFGLPRRSWYYRSVKAAPKLQEHLVTPIKNMIEENPSFGYRTVAALLGFNKNTVQRIFQLKGWQVRKRPVGFRPRIQALPSVASAPNQRWATDLCRIWAGRDGWCSLALVIDCHTRELLGWHLSRSGKSKTAEAALEQALIARFGSLGRVASPFLLRSDNGLVFTSRNYTALVKSYGLQQEFITPYTPEQNGMVERVIRTLKEQCAHRQRFETLQHASRVIGDWIQFYNQKRPHRALKMKTPAQAYAEAA
complement(3814792..3815105)       transposase; GJE10_19280                                                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSITMDEEIKRWTAKRKSALVMEIIQGKTTVAEAARAFDLPPSEIEEWVDDAKRGMENALRAKPLDIREQYEKQLKELREAYGEAMLELRARKSWPPCWARTTDAG
3815104..3815622                   PHAGE_Xantho_Xop411_NC_009543: p42.1; GJE10_19285; phage(gi148727219)                3.91e-36            SalmonellaentericasubspentericaserovarTyphimuriumMSVISTHYDLSRISVGHYKPSTGVFRWNKSKGTALAGDVAGSVNHHGYREITIDGKKLQANRLAWLFVTGMFPNGVIDHINRVRDDNRFSNLRDISVAENNLNKSIRLDNKSGTSGVNWDIKREKWRATGQINRKQKHLGYFKNIDGAIDARRIFCRKYHLTSKEYADEVTE
3815656..3815943                   PHAGE_Salmon_BTP1_NC_042346: membrane-associated initiation of head vertex; GJE10_19290; phage(gi100034)     5.93e-30            SalmonellaentericasubspentericaserovarTyphimuriumMKKFKGTPGPWSGKDVRICRQDRAGLQLGFIMTHDENRVAECEANAHLIAAAPDLLEALQLAEKAMAEGRNVTYPEWYVVINKARAAISKALGEE
3816263..3816436                   PHAGE_Salmon_ST160_NC_014900: C3; GJE10_19295; phage(gi318065918)                    6.17e-27            SalmonellaentericasubspentericaserovarTyphimuriumMENPTMTFAIAGGAVMGIAQLNESLLERITRKLRAGWKRLGEILNQPGVPRHDHYAC
3816417..3816605                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: Kil protein; GJE10_19300; phage(gi399528802)     1.12e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTITPVNGTILVQQGNREFNKLYEKVFPDTKQGMSDAYTWAAGIALGWDKWQDEEWEARHVA
3816735..3817442                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GJE10_19305; phage(gi100029)      8.85e-174           SalmonellaentericasubspentericaserovarTyphimuriumMNLDQLDEPFAAEDIEWRIQQSGKTRDGKVWAMVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIGSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISSDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLDGHDDAQTKCVQVMNIRINELKQVA
3817541..3817552                   attR                                                                                 N/A                 TTTTATTACATA
3817773..3818066                   PHAGE_Salmon_ST160_NC_014900: Abc2; GJE10_19310; phage(gi318065913)                  1.01e-64            SalmonellaentericasubspentericaserovarTyphimuriumMPAPLYGADDPRRCSGNSVSEVLEKFRKNYDLIMSLPQETKEKKKFRHCIWLAEKEERERIYQTSIRPFRKATYTKFIEIDPRLRDYRSRYGAISNN
3818077..3818247                   PHAGE_Salmon_SEN22_NC_028696: hypothetical protein; GJE10_19315; phage(gi966201342)     5.79e-32            SalmonellaentericasubspentericaserovarTyphimuriumMRGLSYDPGILPSEMIIRHRFKPINDIPREEMLARKSFPSVNENKYLNAMFRRWKK
3818244..3818768                   PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19320; phage(gi318065911)     6.34e-13            SalmonellaentericasubspentericaserovarTyphimuriumMNDKAMESLRQANAVVKLAHEKFSALAAENETLKYQEPKLAAMMSCLDAFYADDDVPERAMMTAYNILRKSVCTPATDAFLAEVRARAIPEGYALVPQQIFLEPSDIESICSQCGDGHESGYGDFTDGLLWVGNIQHDDGSIVHGLHISSADYTEEGGVTVCEFAAQPRKGVAA
3818765..3819670                   PHAGE_Salmon_SEN22_NC_028696: hypothetical protein; GJE10_19325; phage(gi966201341)     1.99e-79            SalmonellaentericasubspentericaserovarTyphimuriumMNIDKRTLREVAEKATPGPWKVFSDIDTKTFSIHTPRDKRCENVIKWGGFDCQPNAEANAEFIAAFNPKVALALLDELEHYKSREERVTKLVLDNSTSWDALYKKLEAAEHRIAEQSAIVAAAEKLVRCKGRYHSELNYRALAKLFGVITPDLPPLEHENVHYADAAEVEITALRQRIAELERSETQLINERDAAESALADMYQAATGERPEWSNMFGFADAVDVVKERLATLEANQSQTTPTGIQLITEAIGAHGYIVGCMLQGRPDLALEESRKWVSAFGQAAEIVSAQDADDIKVKGE
3819672..3819890                   PHAGE_Salmon_g341c_NC_013059: O-Polysaccharide acetyltransferase inhibitor; GJE10_19330; phage(gi255252705)     1.19e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTKIFRKNYPRQSRFKEALFFLLFLILMVPISPIFFIWLAGVQAEKIAEWYSSIVWGPFNKLHNKLNPYRED
3819894..3820565                   PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GJE10_19335; phage(gi24371543)     3.87e-137           SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLSDDDAKILIVLKQTLAALTAEPVRYLNKFSGTCVTLEQQSNAADDVAVYMPLYASPPASEREQVRREHAEWSDKTFGDVGPVGPLKHLSKEALETAAEPDDLSEWADMQFLLWDAQRRAGISDEQITLAMVEKLAVNKKREWPEPKDGEPRLHIKEQPAPVVPDEMATSDDMNLYQKSFAQGWNACRAAMINEGKS
3820688..3821095                   PHAGE_Salmon_ST160_NC_014900: hypothetical protein; GJE10_19340; phage(gi318065907)     1.40e-86            SalmonellaentericasubspentericaserovarTyphimuriumQPVSQTYGLPELIEGMEVSVDVSTCDFDAGHRYFGTVTEVSELYTAKNGYILLVQDAKPNFDVNGNSPVSPGSWISCSERMPDNDESKPIAIFTGKCLGQGMFVATYDDDGFFDYWEGMEIIGVSHWMQLPDPPL
3821192..3821371                   PHAGE_Entero_UAB_Phi20_NC_031019: recombination endonuclease subunit; GJE10_19345; phage(gi100054)     1.07e-36            SalmonellaentericasubspentericaserovarTyphimuriumMSCPKCGSGNIAKEKTMRGWSDDYVCCDCGYNDSKDAFGERGKNEFVRINKERKGNEKS
3821472..3822101                   PHAGE_Salmon_ST64T_NC_004348: Eac protein; GJE10_19350; phage(gi24371540)            5.37e-149           SalmonellaentericasubspentericaserovarTyphimuriumMSDQSKYYDYYMVEGEDVKELIQSYDTINDQRNSILTTAAEKVGAIAWTTARSWGGEGGLLQSFVWEKGYEFPCQITIKREDFLDGKRVVIARGKGNTKEGRAYNKELDAIMHNANAKLKSLPEWNYYITNHYGIMRTGIGGQSGRGLGFVMLSTYGGKHPKRNDCLIFAIPNNKEERHGEVVIPDCFKKITYGKFYDIANEVEEEAVE
3822104..3822418                   PHAGE_Salmon_ST160_NC_014900: Xis; GJE10_19355; phage(gi318065906)                   1.19e-72            SalmonellaentericasubspentericaserovarTyphimuriumMESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPTKPKSPYLTTRQACIAALQSPLHTVQVSAGDDITEELKCHYSAEVKPGTPVSHCRTAKDLSNLLGQR
3822331..3823494                   PHAGE_Salmon_ST160_NC_014900: Int; GJE10_19360; phage(gi318065905)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSLFRRGETWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVNKLGEPPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETKIYSAIQKMTNRRHEENWKLMDEACRKNGKQPPVFKPKPAAVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINLEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFGTSVPNMSHSKNKEGTNNT
3823509..3823554                   attR                                                                                 N/A                 TGGTGCCGATAATAGGAGTCGAACCTACGACCTTCGCATTACGAAT

#### region 12 ####
complement(4625262..4625609)       PHAGE_Burkho_BcepMu_NC_005882: gp01; GJE10_23080; phage(gi48696911)                  2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
4625916..4627136                   ISL3-like element ISKox3 family transposase; GJE10_23085                             N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDEKSLYAHILNLSDPWQVKSLSLDENAGSVTVTIEIAENTRLACPTCGKSCSVHDHRHRKWRHLDTCQFTTIVEADVPRIMCPEHGCLTLPVPWAGPGSRYTLLFESFVLSWLKISTVDAVRKQLKLSWNAVDGIMTRAVKRGLARIKSHYPPVIMWMRSPLKKDIVTRSPIAMVGRWPRMIAAQRVLPAIFARSLMGSCWLSKRSQWTTRAIEQRVSTYPVRLRKSPLTASMWRSNWARLIKPVRMNIRTSLLKADTGQKEPASCGSTAISGPNPGRKSCGCVHRSRASAGRKSWQRISGTGHGARKDGVTGRDGWRWRLTVTFPKMPRKREKRLYGILNAMRHSVSNGNAEALNSKIRLLRIKAGGYRNRERFKLGVMFHYGKLNMAF
4627509..4627796                   PHAGE_Burkho_BcepMu_NC_005882: gp21; GJE10_23090; phage(gi48696931)                  3.91e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4627799..4628404                   PHAGE_Pseudo_B3_NC_006548: endolysin; GJE10_23095; phage(gi56692593)                 4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
4628417..4628731                   PHAGE_Burkho_BcepMu_NC_005882: gp25; GJE10_23100; phage(gi48696935)                  1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
4628891..4629346                   PHAGE_Burkho_BcepMu_NC_005882: gp37; GJE10_23105; phage(gi48696947)                  3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
4629343..4629540                   PHAGE_Burkho_BcepMu_NC_005882: gp38; GJE10_23110; phage(gi48696948)                  2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
4629530..4630957                   PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; GJE10_23115; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
4630957..4631481                   PHAGE_Burkho_BcepMu_NC_005882: gp40; GJE10_23120; phage(gi48696950)                  6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
4631533..4631850                   PHAGE_Burkho_BcepMu_NC_005882: gp41; GJE10_23125; phage(gi48696951)                  1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
4631810..4631938                   GpE family phage tail protein; GJE10_23130                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
4632035..4634389                   PHAGE_Burkho_BcepMu_NC_005882: gp44; GJE10_23135; phage(gi48696954)                  1.56e-60            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
4634389..4635342                   PHAGE_Burkho_BcepMu_NC_005882: gp45; GJE10_23140; phage(gi48696955)                  5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
4635342..4635551                   PHAGE_Burkho_BcepMu_NC_005882: gp46; GJE10_23145; phage(gi48696956)                  6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
4635539..4636582                   PHAGE_Burkho_BcepMu_NC_005882: tail protein; GJE10_23150; phage(gi48696957)          2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
4636592..4637314                   PHAGE_Burkho_BcepMu_NC_005882: gp48; GJE10_23155; phage(gi48696958)                  3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
4637642..4638004                   PHAGE_Entero_SfV_NC_003444: putative flippase; GJE10_23160; phage(gi19549013)        2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
4638001..4638930                   PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; GJE10_23165; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
4638930..4640477                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; GJE10_23170; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
4640641..4641000                   PHAGE_Burkho_BcepMu_NC_005882: gp49; GJE10_23175; phage(gi48696959)                  3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4640991..4642106                   PHAGE_Burkho_BcepMu_NC_005882: gp50; GJE10_23180; phage(gi48696960)                  2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
4642099..4642731                   PHAGE_Burkho_BcepMu_NC_005882: gp51; GJE10_23185; phage(gi48696961)                  5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
4642734..4644479                   PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; GJE10_23190; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
4644484..4645089                   DUF4376 domain-containing protein; GJE10_23195                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
4645086..4645541                   PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; GJE10_23200; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
4645790..4646080                   hypothetical protein; GJE10_23205                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
4646277..4647005                   PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; GJE10_23210; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
